View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3641_high_5 (Length: 391)

Name: NF3641_high_5
Description: NF3641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3641_high_5
NF3641_high_5
[»] chr6 (66 HSPs)
chr6 (7-335)||(26656025-26656353)
chr6 (7-335)||(26761996-26762324)
chr6 (5-329)||(27337894-27338218)
chr6 (5-329)||(27398634-27398958)
chr6 (5-330)||(25579753-25580081)
chr6 (5-335)||(26142899-26143232)
chr6 (5-335)||(26055960-26056293)
chr6 (5-335)||(26075930-26076263)
chr6 (5-335)||(25538574-25538907)
chr6 (1-335)||(26646509-26646843)
chr6 (1-335)||(26752477-26752811)
chr6 (5-211)||(26048879-26049085)
chr6 (5-211)||(26070048-26070254)
chr6 (5-335)||(25481776-25482109)
chr6 (10-287)||(26823879-26824156)
chr6 (1-120)||(26884193-26884314)
chr6 (13-122)||(27427642-27427751)
chr6 (43-186)||(26623048-26623191)
chr6 (43-186)||(26729026-26729169)
chr6 (5-120)||(27678980-27679095)
chr6 (5-144)||(28149971-28150110)
chr6 (5-120)||(27677652-27677767)
chr6 (5-120)||(27698532-27698647)
chr6 (5-120)||(27706440-27706555)
chr6 (10-173)||(28139580-28139743)
chr6 (5-156)||(27593022-27593173)
chr6 (5-120)||(27611040-27611155)
chr6 (5-120)||(27718417-27718532)
chr6 (10-140)||(27531215-27531345)
chr6 (5-120)||(27724883-27724998)
chr6 (51-186)||(26937174-26937309)
chr6 (5-111)||(28181148-28181254)
chr6 (5-86)||(27229266-27229347)
chr6 (5-117)||(26341975-26342087)
chr6 (5-120)||(27604743-27604858)
chr6 (5-112)||(28242838-28242945)
chr6 (52-236)||(28098291-28098475)
chr6 (5-111)||(28185400-28185506)
chr6 (10-103)||(31284327-31284420)
chr6 (5-111)||(28226984-28227090)
chr6 (53-182)||(2184980-2185109)
chr6 (50-111)||(28297760-28297821)
chr6 (50-111)||(28514252-28514313)
chr6 (52-100)||(2184369-2184417)
chr6 (1-157)||(26802472-26802628)
chr6 (53-101)||(26975134-26975182)
chr6 (10-105)||(26861655-26861750)
chr6 (53-103)||(25071741-25071791)
chr6 (5-99)||(28234598-28234692)
chr6 (5-106)||(28325515-28325616)
chr6 (52-120)||(26848741-26848809)
chr6 (265-332)||(26861907-26861974)
chr6 (52-111)||(27214498-27214557)
chr6 (52-111)||(27234671-27234730)
chr6 (251-306)||(28781419-28781474)
chr6 (251-306)||(28786558-28786613)
chr6 (251-306)||(28792679-28792734)
chr6 (127-186)||(29826183-29826242)
chr6 (55-103)||(26949745-26949793)
chr6 (5-157)||(28781173-28781325)
chr6 (200-306)||(27214649-27214755)
chr6 (200-306)||(27234473-27234579)
chr6 (52-106)||(27665169-27665223)
chr6 (181-285)||(25506857-25506961)
chr6 (76-116)||(28786383-28786423)
chr6 (76-116)||(28792504-28792544)
[»] chr4 (8 HSPs)
chr4 (10-335)||(18731314-18731639)
chr4 (10-335)||(18699210-18699535)
chr4 (10-335)||(18723895-18724220)
chr4 (10-306)||(18655316-18655612)
chr4 (10-335)||(18679377-18679702)
chr4 (13-122)||(18073804-18073913)
chr4 (13-110)||(17989088-17989185)
chr4 (53-191)||(5090921-5091059)
[»] chr1 (3 HSPs)
chr1 (7-335)||(28127489-28127817)
chr1 (10-335)||(268167-268492)
chr1 (51-335)||(28164173-28164456)
[»] chr8 (1 HSPs)
chr8 (51-329)||(29273599-29273877)
[»] scaffold0003 (1 HSPs)
scaffold0003 (13-122)||(59612-59721)
[»] scaffold0349 (2 HSPs)
scaffold0349 (5-120)||(3459-3575)
scaffold0349 (5-120)||(14394-14508)
[»] scaffold0277 (3 HSPs)
scaffold0277 (54-329)||(4500-4775)
scaffold0277 (251-315)||(13475-13539)
scaffold0277 (76-157)||(13633-13714)
[»] scaffold0038 (4 HSPs)
scaffold0038 (5-112)||(43000-43107)
scaffold0038 (5-111)||(34759-34865)
scaffold0038 (5-111)||(27482-27588)
scaffold0038 (5-106)||(116830-116931)
[»] scaffold0019 (1 HSPs)
scaffold0019 (5-106)||(58334-58435)
[»] chr2 (2 HSPs)
chr2 (5-106)||(3279722-3279823)
chr2 (53-106)||(17993736-17993789)
[»] scaffold0419 (1 HSPs)
scaffold0419 (251-315)||(7805-7869)


Alignment Details
Target: chr6 (Bit Score: 221; Significance: 1e-121; HSPs: 66)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 7 - 335
Target Start/End: Original strand, 26656025 - 26656353
Alignment:
Q  7 aaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgct 106  Q
    ||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  26656025 aaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgct 26656124  T
Q  107 acaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaagca 206  Q
    | ||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  26656125 ataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacgacatcagactggaagttacggtgagcatcttactaagca 26656224  T
Q  207 tgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagt 306  Q
    |||| | ||||||||||||||||||||||||||| | || ||  | |||||||||| |||||||||| ||||||| ||||| || |||||||||||||||    
T  26656225 tgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagt 26656324  T
Q  307 gaagggtaccccactttacttaaatcttg 335  Q
     ||||||||||||||||||||||||||||    
T  26656325 caagggtaccccactttacttaaatcttg 26656353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 7 - 335
Target Start/End: Original strand, 26761996 - 26762324
Alignment:
Q  7 aaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgct 106  Q
    ||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  26761996 aaggccattgaagaatccaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgct 26762095  T
Q  107 acaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaagca 206  Q
    | ||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||||||||| |||||  |||||||||||||||||||    
T  26762096 ataagacaaagggttgttcggttttgcctgttttctatggtgtggatcctactcacatacgacatcagactggaagttacggtgagcatcttactaagca 26762195  T
Q  207 tgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagt 306  Q
    |||| | ||||||||||||||||||||||||||| | || ||  | |||||||||| |||||||||| ||||||| ||||| || |||||||||||||||    
T  26762196 tgaaaagaagttccaaaataacaaggaaaacatgcagaggttggagcaatggaagatggctctgaccaaagctgccaacttgtctggctaccattgtagt 26762295  T
Q  307 gaagggtaccccactttacttaaatcttg 335  Q
     ||||||||||||||||||||||||||||    
T  26762296 caagggtaccccactttacttaaatcttg 26762324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 5 - 329
Target Start/End: Complemental strand, 27338218 - 27337894
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| || | ||| || ||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  27338218 tcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactg 27338119  T
Q  105 ctacaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaag 204  Q
    ||||||||||| ||||||||||||||||||| ||||||||  || |||||||| |||| ||||||||||||||||||||||| |||||||||||||||||    
T  27338118 ctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatcagactgggagttatggtgagcatcttactaag 27338019  T
Q  205 catgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgta 304  Q
    |||||||| ||||||||||||||||||||||||||| | || || ||  ||||||||| |||||| ||||||||||||||||| || ||| |||||| ||    
T  27338018 catgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagctgctaacttctccggccaccatttta 27337919  T
Q  305 gtgaagggtaccccactttacttaa 329  Q
    || ||||||||||||||||||||||    
T  27337918 gtcaagggtaccccactttacttaa 27337894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 5 - 329
Target Start/End: Complemental strand, 27398958 - 27398634
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| || | ||| || ||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  27398958 tcaaggccattgaagagtctaggattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactg 27398859  T
Q  105 ctacaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaag 204  Q
    ||||||||||| ||||||||||||||||||| ||||||||  || |||||||| |||| ||||||||||||||||||||||| |||||||||||||||||    
T  27398858 ctacaagacaaggggttgttcggttttgcctgttttctatggtgcggatcctactcacgtacgacatcagactgggagttatggtgagcatcttactaag 27398759  T
Q  205 catgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgta 304  Q
    |||||||| ||||||||||||||||||||||||||| | || || ||  ||||||||| |||||| ||||||||||||||||| || ||| |||||| ||    
T  27398758 catgaagataagttccaaaataacaaggaaaacatggagaggttgaagaaatggaagatggctcttacccaagctgctaacttctccggccaccatttta 27398659  T
Q  305 gtgaagggtaccccactttacttaa 329  Q
    || ||||||||||||||||||||||    
T  27398658 gtcaagggtaccccactttacttaa 27398634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 5 - 330
Target Start/End: Original strand, 25579753 - 25580081
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    ||||||||||||||||||| | ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25579753 tcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactg 25579852  T
Q  105 ctacaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaag 204  Q
    ||||||||||||| |||| |  || |||||  |||||||| ||||||| |||| ||||||||||||||||| |||||||||| ||||| |||||||||||    
T  25579853 ctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagtatcttactaag 25579952  T
Q  205 catgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgta 304  Q
    |||||||| | ||| ||||||||| || |||||||| |  ||||   |||||||||||  ||||| ||||||||||||||||| || ||||| |||| ||    
T  25579953 catgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtcaatggaagatagctcttacccaagctgctaacttgtccggctatcattata 25580052  T
Q  305 gtg---aagggtaccccactttacttaaa 330  Q
    ||    | |||||||||||||||||||||    
T  25580053 gtcctcatgggtaccccactttacttaaa 25580081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 5 - 335
Target Start/End: Original strand, 26142899 - 26143232
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    ||||||||||||||||||| | ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26142899 tcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactg 26142998  T
Q  105 ctacaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaag 204  Q
    ||||||||||||| |||| |  || || ||  |||||||| ||||||| |||| |||||||||| |||||| ||||| |||| |||||||||||||||||    
T  26142999 ctacaagacaaagagttgcttagtatttcccgttttctatgatgtggaacctactcacatacgaaatcagagtgggatttatggtgagcatcttactaag 26143098  T
Q  205 catgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgta 304  Q
    |||||||| | ||| ||||||||| || |||||||| |  ||||   |||||||||||  ||||| | ||||||||||||||| || ||||| |||| ||    
T  26143099 catgaagagaggtttcaaaataacgagaaaaacatggagcgattgcgtcaatggaagatagctcttatccaagctgctaacttgtccggctatcattata 26143198  T
Q  305 gtg---aagggtaccccactttacttaaatcttg 335  Q
    ||    | ||||||||||||||||||||| ||||    
T  26143199 gtcctcatgggtaccccactttacttaaaacttg 26143232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 5 - 335
Target Start/End: Original strand, 26055960 - 26056293
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||| ||||||||   ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26055960 tcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactg 26056059  T
Q  105 ctacaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaag 204  Q
    |||||| |||||| |||| |  || |||||  |||||||| ||||||| |||| ||||||||||||||||| |||||||||| |||||||||||||||||    
T  26056060 ctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcatcttactaag 26056159  T
Q  205 catgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgta 304  Q
    ||| ||||   ||||||||||||| || |||||||| |  ||||   ||||||||||| |||||| || |||||||||||||| || ||||| |||| ||    
T  26056160 cataaagaggggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaacttgtccggctatcattata 26056259  T
Q  305 g---tgaagggtaccccactttacttaaatcttg 335  Q
    |   | | | |||||| |||||||||||||||||    
T  26056260 gtcctcatgagtaccctactttacttaaatcttg 26056293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 5 - 335
Target Start/End: Original strand, 26075930 - 26076263
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||| ||||||||   ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26075930 tcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactg 26076029  T
Q  105 ctacaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaag 204  Q
    |||||| |||||| |||| |  || |||||  |||||||| ||||||| |||| ||||||||||||||||| |||||||||| |||||||||||||||||    
T  26076030 ctacaacacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcacatacgacatcagagtgggagttatggtgagcatcttactaag 26076129  T
Q  205 catgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgta 304  Q
    ||| ||||   ||||||||||||| || |||||||| |  ||||   ||||||||||| |||||| || |||||||||||||| || ||||| |||| ||    
T  26076130 cataaagaggggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaacttgtccggctatcattata 26076229  T
Q  305 g---tgaagggtaccccactttacttaaatcttg 335  Q
    |   | | | |||||| |||||||||||||||||    
T  26076230 gtcctcatgagtaccctactttacttaaatcttg 26076263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 5 - 335
Target Start/End: Original strand, 25538574 - 25538907
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||| |||||||| |  || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  25538574 tcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccagatcattcactg 25538673  T
Q  105 ctacaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaag 204  Q
    ||||||||||||| |||| |  || |||||  |||||||| ||||||| |||| |||  |||||||||||| |||||||||| |||||||| ||||||||    
T  25538674 ctacaagacaaagagttgcttagtattgcccgttttctatgatgtggaacctactcagttacgacatcagagtgggagttatggtgagcattttactaag 25538773  T
Q  205 catgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgta 304  Q
    |||||||| | ||| ||||||||  || |||||||| |  ||||   |||||||||||  ||||| | ||||||||||||||| || ||||| |||| ||    
T  25538774 catgaagagaggtttcaaaataatgagaaaaacatggagcgattgcgtcaatggaagatagctcttatccaagctgctaacttgtccggctatcattata 25538873  T
Q  305 gtg---aagggtaccccactttacttaaatcttg 335  Q
    ||    | ||||||||||||||||||||||||||    
T  25538874 gtcctcatgggtaccccactttacttaaatcttg 25538907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 26646509 - 26646843
Alignment:
Q  1 ctcatcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattc 100  Q
    ||||||||||||||||||||||| | ||| || |||||  | ||||||  ||||||||| ||||||  ||| ||||||||||||||||||||||||||||    
T  26646509 ctcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattc 26646608  T
Q  101 actgctacaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttac 200  Q
    | |||||||||||||||||| ||   ||||||||  ||||||||   |||||||||| ||| ||||| ||||| | |||||||||| |||| ||||| ||    
T  26646609 attgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacggcatcaaagtgggagttatggtgaacatctcac 26646708  T
Q  201 taagcatgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccat 300  Q
    |||||| ||||| |  ||||||||||||||| |||||| | || ||||  |||||||||||  |||||||||||||||||||||||| || || ||||||    
T  26646709 taagcacgaagagagtttccaaaataacaagaaaaacaaggaacgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggataccat 26646808  T
Q  301 tgtagtgaagggtaccccactttacttaaatcttg 335  Q
    | ||||   ||||||||||||||||||||| ||||    
T  26646809 tatagtcctgggtaccccactttacttaaaccttg 26646843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 335
Target Start/End: Original strand, 26752477 - 26752811
Alignment:
Q  1 ctcatcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattc 100  Q
    ||||||||||||||||||||||| | ||| || |||||  | ||||||  ||||||||| ||||||  ||| ||||||||||||||||||||||||||||    
T  26752477 ctcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattc 26752576  T
Q  101 actgctacaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttac 200  Q
    | |||||||||||||||||| ||   ||||||||  ||||||||   |||||||||| ||| ||||| ||||| | |||||||||| |||| ||||| ||    
T  26752577 attgctacaagacaaagggtcgtctcgttttgcccgttttctatggcgtggatcctactcagatacggcatcaaagtgggagttatggtgaacatctcac 26752676  T
Q  201 taagcatgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccat 300  Q
    |||||| ||||| |  ||||||||||||||| |||||| | || ||||  |||||||||||  |||||||||||||||||||||||| || || ||||||    
T  26752677 taagcacgaagagagtttccaaaataacaagaaaaacaaggaacgattgcatcaatggaagttggctctgacccaagctgctaacttgtccggataccat 26752776  T
Q  301 tgtagtgaagggtaccccactttacttaaatcttg 335  Q
    | ||||   ||||||||||||||||||||| ||||    
T  26752777 tatagtcctgggtaccccactttacttaaaccttg 26752811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 26048879 - 26049085
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||| |||||||| | ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26048879 tcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactg 26048978  T
Q  105 ctacaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaag 204  Q
    ||||||||||||| |||| |  || |||||  |||| ||| ||||||| |||| ||||||||||||||| | ||| |||||| |||||||||||||||||    
T  26048979 ctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatcatagtggaagttatggtgagcatcttactaag 26049078  T
Q  205 catgaag 211  Q
    |||||||    
T  26049079 catgaag 26049085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 5 - 211
Target Start/End: Original strand, 26070048 - 26070254
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||| |||||||| | ||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26070048 tcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactg 26070147  T
Q  105 ctacaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaag 204  Q
    ||||||||||||| |||| |  || |||||  |||| ||| ||||||| |||| ||||||||||||||| | ||| |||||| |||||||||||||||||    
T  26070148 ctacaagacaaagagttgcttagtattgcccgttttttatgatgtggaacctactcacatacgacatcatagtggaagttatggtgagcatcttactaag 26070247  T
Q  205 catgaag 211  Q
    |||||||    
T  26070248 catgaag 26070254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 5 - 335
Target Start/End: Original strand, 25481776 - 25482109
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    ||||||||||||||||||| | ||| |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  25481776 tcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcactg 25481875  T
Q  105 ctacaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaag 204  Q
    ||||||||||||| |||| |  || || ||  ||||||||  ||||||||||| | |  | |||| ||| ||  | |||||| ||||  |||| ||||||    
T  25481876 ctacaagacaaagagttgcttagtattacccgttttctatggtgtggatcctactgatgttcgacgtcatacatgtagttatggtgaatatctgactaag 25481975  T
Q  205 catgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgta 304  Q
    ||||||||   ||||||||||||| || |||||||| |  ||||   ||||||||||| |||||| || ||||||||||| || || ||||| |||| ||    
T  25481976 catgaagaggggttccaaaataacgagaaaaacatggagcgattgcgtcaatggaagatggctcttactcaagctgctaatttgtccggctatcattata 25482075  T
Q  305 g---tgaagggtaccccactttacttaaatcttg 335  Q
    |   | | | ||||||||||||||||||| ||||    
T  25482076 gtcctcatgagtaccccactttacttaaaacttg 25482109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 26823879 - 26824156
Alignment:
Q  10 gccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctaca 109  Q
    ||||||||||| || | ||| || |||||  | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |  |||||    
T  26823879 gccattgaagagtctaggatttttattcctgtgttttctgccaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcgcgtctaca 26823978  T
Q  110 agacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaagcatga 209  Q
    ||  ||||||  |    ||||||||| ||||||||  ||||||||||  | ||||||||||||||  ||||||||||  |   ||||| |||||||||||    
T  26823979 aggaaaaggggcgcctcgttttgcctgttttctatggtgtggatcctggtgacatacgacatcagcgtgggagttatgctatacatctcactaagcatga 26824078  T
Q  210 agacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaactt 287  Q
    | | | ||||  ||||||||||||||||||| | | |||   ||||||||||||||||||||  ||||||||| ||||    
T  26824079 aaagaggttcggaaataacaaggaaaacatggagaaattgcttcaatggaagaaggctctgaaacaagctgctgactt 26824156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 26884193 - 26884314
Alignment:
Q  1 ctcatcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccaca--tcat 98  Q
    ||||||||||||||||||||||| |  || || ||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||    
T  26884193 ctcatcaaggccattgaagaatctagaatttttattccaatattttctaccaactatgcatcttcttcattttgtttggacgaacttgtccacatgtcat 26884292  T
Q  99 tcactgctacaagacaaagggt 120  Q
    |||||||||| |||||||||||    
T  26884293 tcactgctacgagacaaagggt 26884314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 27427751 - 27427642
Alignment:
Q  13 attgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaaga 112  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||| |    
T  27427751 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaa 27427652  T
Q  113 caaagggttg 122  Q
    | ||||||||    
T  27427651 ccaagggttg 27427642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 43 - 186
Target Start/End: Original strand, 26623048 - 26623191
Alignment:
Q  43 ttttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaagacaaagggttgttcggttttgcctattttct 142  Q
    |||||| |||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| ||   ||||||||  | ||||    
T  26623048 ttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaaagggtcgtctcgttttgcccgtcttct 26623147  T
Q  143 atcatgtggatcctaatcacatacgacatcagactgggagttat 186  Q
    ||   |||||||||| ||||||||| ||||| ||||||||||||    
T  26623148 atggcgtggatcctactcacatacggcatcaaactgggagttat 26623191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 43 - 186
Target Start/End: Original strand, 26729026 - 26729169
Alignment:
Q  43 ttttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaagacaaagggttgttcggttttgcctattttct 142  Q
    |||||| |||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| ||   ||||||||  | ||||    
T  26729026 ttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctacaaaacaaagggtcgtctcgttttgcccgtcttct 26729125  T
Q  143 atcatgtggatcctaatcacatacgacatcagactgggagttat 186  Q
    ||   |||||||||| ||||||||| ||||| ||||||||||||    
T  26729126 atggcgtggatcctactcacatacggcatcaaactgggagttat 26729169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 120
Target Start/End: Original strand, 27678980 - 27679095
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| || | ||| || |||||  | ||||||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  27678980 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactg 27679079  T
Q  105 ctacaagacaaagggt 120  Q
    ||||||||||||||||    
T  27679080 ctacaagacaaagggt 27679095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 28149971 - 28150110
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| |||| ||| |||||||| || || |||  ||||||| | ||||||||||| ||||||||||||||||||||||| ||||||||    
T  28149971 tcaaggccattgaagagtccaggattttcattccaatcttctctatcaactatacttcttcttcattttgtttggacgaacttgtccacattattcactg 28150070  T
Q  105 ctacaagacaaagggttgttcggttttgcctattttctat 144  Q
    || |||| |||||||||| |  ||| ||||||||||||||    
T  28150071 cttcaaggcaaagggttgcttagttctgcctattttctat 28150110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 27677767 - 27677652
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| || | ||| || ||| |  | ||||||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  27677767 tcaaggccattgaagagtctaggatttttattgctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactg 27677668  T
Q  105 ctacaagacaaagggt 120  Q
    ||||||||||||||||    
T  27677667 ctacaagacaaagggt 27677652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 27698647 - 27698532
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    ||||||||||||| ||||| | ||| || |||||  | ||||||  ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  27698647 tcaaggccattgatgaatctaggatttttattcctgtgttttctctcaactatgcatcttcttcattttgtttggacgaacttgtccacataattcactg 27698548  T
Q  105 ctacaagacaaagggt 120  Q
    |||| |||||||||||    
T  27698547 ctacgagacaaagggt 27698532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 27706555 - 27706440
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| || | ||| || |||||  | ||||||  || |||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  27706555 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactg 27706456  T
Q  105 ctacaagacaaagggt 120  Q
    ||||||||||||||||    
T  27706455 ctacaagacaaagggt 27706440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 10 - 173
Target Start/End: Original strand, 28139580 - 28139743
Alignment:
Q  10 gccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctaca 109  Q
    |||||||||||||| | ||| ||||| ||  | |||||   ||||||||| |||||||| || || |||||||||||||||||||||||| |||||| ||    
T  28139580 gccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttcgttttgcttggacgaacttgtccacatcattgactgcttca 28139679  T
Q  110 agacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatca 173  Q
    | |||||||| |||| |||||||||| ||||||||  ||||||||||  |||||| ||||||||    
T  28139680 acacaaagggatgtttggttttgcctgttttctatggtgtggatccttctcacattcgacatca 28139743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 27593173 - 27593022
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| || | ||| || |||||  | ||||||  ||||||||| |||||||| || |||||||||||||||| |||||||||||| ||    
T  27593173 tcaaggccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattcattg 27593074  T
Q  105 ctacaagacaaagggttgttcggttttgcctattttctatcatgtggatcct 156  Q
    |||||||||||||||| |  | ||||||||| |||||| |  ||||||||||    
T  27593073 ctacaagacaaagggtcgccctgttttgcctgttttctttggtgtggatcct 27593022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 27611155 - 27611040
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    ||||||||||||| ||||| | ||| || |||||  | ||||||  ||||||||| |||||||| || ||||||||||||||||||||||| ||||||||    
T  27611155 tcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactg 27611056  T
Q  105 ctacaagacaaagggt 120  Q
    ||||||||||||||||    
T  27611055 ctacaagacaaagggt 27611040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 27718532 - 27718417
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    ||||||||||||| ||||| | ||| || |||||  | ||||||  ||||||||| |||||||| || ||||||||||||||||||||||| ||||||||    
T  27718532 tcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactg 27718433  T
Q  105 ctacaagacaaagggt 120  Q
    ||||||||||||||||    
T  27718432 ctacaagacaaagggt 27718417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 10 - 140
Target Start/End: Complemental strand, 27531345 - 27531215
Alignment:
Q  10 gccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctaca 109  Q
    ||||||||| |||| | ||| || |||||| |||||||||  |||||||||||||||||||| ||||||||||||||||| ||||||| ||| ||||||     
T  27531345 gccattgaaaaatctaggatttttattcccgtattttctgaaaactatgcatcttcttcattttgtttggacgaacttgttcacatcactcattgctacg 27531246  T
Q  110 agacaaagggttgttcggttttgcctatttt 140  Q
    | ||||||||||||   ||||||||| ||||    
T  27531245 atacaaagggttgtcttgttttgcctgtttt 27531215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 27724998 - 27724883
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    ||||||||||||| ||||| | ||| || |||||  | ||||||  ||||||||| | |||||| || ||||||||||||||||||||||| ||||||||    
T  27724998 tcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcctattcttcgttttgtttggacgaacttgtccacataattcactg 27724899  T
Q  105 ctacaagacaaagggt 120  Q
    ||||||||||||||||    
T  27724898 ctacaagacaaagggt 27724883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 186
Target Start/End: Original strand, 26937174 - 26937309
Alignment:
Q  51 caactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaagacaaagggttgttcggttttgcctattttctatcatgtg 150  Q
    |||||||||  |||||||||| |||||||||||||||||||||||| || |||||| ||||||||| |||  |    ||||||||||||||||| | |||    
T  26937174 caactatgccacttcttcattttgtttggacgaacttgtccacatcgttgactgcttcaagacaaaaggtcatctaattttgcctattttctatgaagtg 26937273  T
Q  151 gatcctaatcacatacgacatcagactgggagttat 186  Q
    ||||||  |||| | ||||| || ||||||||||||    
T  26937274 gatccttctcacgttcgacaccaaactgggagttat 26937309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 28181148 - 28181254
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| || | ||| ||||||||| | || |||  ||| ||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  28181148 tcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactg 28181247  T
Q  105 ctacaag 111  Q
    || ||||    
T  28181248 cttcaag 28181254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 27229266 - 27229347
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaact 86  Q
    ||||||||||||| |||||   ||| || |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  27229266 tcaaggccattgacgaatctcggatttttattcccatattttctgccaactatgcatcttcttcattttgtttgaacgaact 27229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 26342087 - 26341975
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||| ||||||||||| |||| ||| |||||||| || || ||   ||||||||| |||||||| || ||||||||||||||||||||||||||||| ||    
T  26342087 tcaaagccattgaagagtccaggattttcattccaattttctcaatcaactatgcttcttcttcgttttgtttggacgaacttgtccacatcattcattg 26341988  T
Q  105 ctacaagacaaag 117  Q
    || |||| |||||    
T  26341987 cttcaaggcaaag 26341975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 27604858 - 27604743
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    ||||||||||||| ||||||| ||| || |||||  | ||||||  ||| ||||| |||||||| || |||||||| |||||||| ||||||||||| ||    
T  27604858 tcaaggccattgatgaatccaggatttttattcctgtgttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcattcattg 27604759  T
Q  105 ctacaagacaaagggt 120  Q
    ||||| ||||||||||    
T  27604758 ctacacgacaaagggt 27604743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 28242838 - 28242945
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| || | ||| ||||||||  | || |||  ||| ||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  28242838 tcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactg 28242937  T
Q  105 ctacaaga 112  Q
    || |||||    
T  28242938 ctgcaaga 28242945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 236
Target Start/End: Complemental strand, 28098475 - 28098291
Alignment:
Q  52 aactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctac-aagacaaagggttgttcggttttgcctattttctatcatgtg 150  Q
    |||||||| |||||||  || |||||||| ||||||||||||||||||||| | ||| |||| ||||||||| |  ||||| |||||||| | | | |||    
T  28098475 aactatgcttcttctttgttttgtttggatgaacttgtccacatcattcaccgttacgaaga-aaagggttgcttcgtttttcctattttttgtgacgtg 28098377  T
Q  151 gatcctaatcacatacgacatcagactgggagttattgtg-agcatcttactaagcatgaagacaagttccaaaataacaaggaaaa 236  Q
    || |||  |||| | ||||||||||| ||||||||| ||| ||||| |  ||||||||||||| | ||||||||||||||| |||||    
T  28098376 gaaccttctcacgtgcgacatcagacggggagttatggtgaagcat-tagctaagcatgaagagaggttccaaaataacaaagaaaa 28098291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 28185400 - 28185506
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| || | ||| ||||||||| | || |||  ||| ||||| ||||||||||| || |||||||||||||||||||||||| ||||    
T  28185400 tcaaggccattgaagagtctaggattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattaactg 28185499  T
Q  105 ctacaag 111  Q
    || ||||    
T  28185500 cttcaag 28185506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 31284327 - 31284420
Alignment:
Q  10 gccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcact 103  Q
    ||||||||||| || | ||| || || ||| | ||||||||||||||||| ||||| || || |||||||||||||||||||||||||||||||    
T  31284327 gccattgaagagtctaggatttttatccccgtgttttctgccaactatgcctcttcgtcgttttgtttggacgaacttgtccacatcattcact 31284420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 28226984 - 28227090
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||| |||||||||||| | ||| ||||||||  | || |||  ||| ||||| ||||||||||| || |||||||||||||||||||||||||| ||    
T  28226984 tcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattg 28227083  T
Q  105 ctacaag 111  Q
    || ||||    
T  28227084 cttcaag 28227090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 53 - 182
Target Start/End: Original strand, 2184980 - 2185109
Alignment:
Q  53 actatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaagacaaagggttgttcggttttgcctattttctatcatgtgga 152  Q
    ||||||| ||||||||||| |||||||||||||||||||| |||||||  |||| |||| |||||||  |  ||||| ||||  |||||| | |  | ||    
T  2184980 actatgcttcttcttcattttgtttggacgaacttgtccatatcattcgttgctccaagtcaaagggacgcccggttctgccagttttctgtaacataga 2185079  T
Q  153 tcctaatcacatacgacatcagactgggag 182  Q
    |||||||||  ||||| |||||||||||||    
T  2185080 tcctaatcatgtacgaaatcagactgggag 2185109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 28297821 - 28297760
Alignment:
Q  50 ccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaag 111  Q
    |||| ||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  28297821 ccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaag 28297760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 28514252 - 28514313
Alignment:
Q  50 ccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaag 111  Q
    |||| ||||| ||||||||||| || ||||||||||||||||||||||||||||||| ||||    
T  28514252 ccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgcttcaag 28514313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 2184369 - 2184417
Alignment:
Q  52 aactatgcatcttcttcattatgtttggacgaacttgtccacatcattc 100  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  2184369 aactatgcttcttcttcattttgtttggacgaacttgtccacatcattc 2184417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 26802472 - 26802628
Alignment:
Q  1 ctcatcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattc 100  Q
    ||||||||||||||||||||||| |  || || |||||  | ||||||  ||||||||| |||||   ||| || |||||||||||||| ||||| ||||    
T  26802472 ctcatcaaggccattgaagaatctagaatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattc 26802571  T
Q  101 actgctacaagacaaagggttgttcggttttgcctattttctatcatgtggatccta 157  Q
    | ||||| |||||||||||| |    || ||||||||||||| |  |||||||||||    
T  26802572 attgctataagacaaagggtcgcctcgtcttgcctattttctttggtgtggatccta 26802628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 26975134 - 26975182
Alignment:
Q  53 actatgcatcttcttcattatgtttggacgaacttgtccacatcattca 101  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  26975134 actatgcttcttcttcattttgtttggacgaacttgtccacatcattca 26975182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 26861655 - 26861750
Alignment:
Q  10 gccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgc 105  Q
    ||||||||||| || |  || ||||||||  | ||||||||||||||||| ||||| ||||| |||||||| ||||||||||| |||||| |||||    
T  26861655 gccattgaagagtctagaattttcattcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgtccaaatcattaactgc 26861750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 25071741 - 25071791
Alignment:
Q  53 actatgcatcttcttcattatgtttggacgaacttgtccacatcattcact 103  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||||||||||    
T  25071741 actatgcttcttcttcattttgtttagacgaacttgtccacatcattcact 25071791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 28234598 - 28234692
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcatt 99  Q
    |||||||||||||||| || | ||| ||||||||  | || |||  ||| ||||| ||||||||||| || ||||||||||||||||||||||||    
T  28234598 tcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcatt 28234692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 28325515 - 28325616
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| || | ||| |||||||| || || |||  ||| ||||| |||||||| || || ||||| |||||||||||||| ||||||||    
T  28325515 tcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactg 28325614  T
Q  105 ct 106  Q
    ||    
T  28325615 ct 28325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 26848741 - 26848809
Alignment:
Q  52 aactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaagacaaagggt 120  Q
    ||||||||  ||||||| || ||||||||||||||||||||||||||||| |||| ||||  |||||||    
T  26848741 aactatgccacttcttcgttttgtttggacgaacttgtccacatcattcattgctccaaggaaaagggt 26848809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 26861907 - 26861974
Alignment:
Q  265 gctctgacccaagctgctaacttttcaggctaccattgtagtgaagggtaccccactttacttaaatc 332  Q
    ||||||| ||||||||||||||| ||||||||||||| ||||   ||||||||||||| || ||||||    
T  26861907 gctctgaaccaagctgctaacttgtcaggctaccattttagtcctgggtaccccacttaacataaatc 26861974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 27214498 - 27214557
Alignment:
Q  52 aactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaag 111  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||| ||| |||| ||||    
T  27214498 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaag 27214557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 27234730 - 27234671
Alignment:
Q  52 aactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaag 111  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||| ||| |||| ||||    
T  27234730 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgctccaag 27234671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 28781419 - 28781474
Alignment:
Q  251 atcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagt 306  Q
    |||||||||||  |||||||||||||||||||||||| || |||||||||| ||||    
T  28781419 atcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagt 28781474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 28786558 - 28786613
Alignment:
Q  251 atcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagt 306  Q
    |||||||||||  |||||||||||||||||||||||| || |||||||||| ||||    
T  28786558 atcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagt 28786613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 28792679 - 28792734
Alignment:
Q  251 atcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagt 306  Q
    |||||||||||  |||||||||||||||||||||||| || |||||||||| ||||    
T  28792679 atcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagt 28792734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 186
Target Start/End: Original strand, 29826183 - 29826242
Alignment:
Q  127 gttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttat 186  Q
    |||||||||||||||||| |||||||||||  |||  | |||||||||||||||||||||    
T  29826183 gttttgcctattttctatgatgtggatccttctcatgtgcgacatcagactgggagttat 29826242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 103
Target Start/End: Original strand, 26949745 - 26949793
Alignment:
Q  55 tatgcatcttcttcattatgtttggacgaacttgtccacatcattcact 103  Q
    ||||| ||||||||||| ||||| |||||||||||||| ||||||||||    
T  26949745 tatgcttcttcttcattttgtttagacgaacttgtccatatcattcact 26949793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 157
Target Start/End: Original strand, 28781173 - 28781325
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||| |||||||| | ||| || |||||  | ||||||  |||||||||  ||||   ||| || |||||||||||||| ||||| ||||| ||    
T  28781173 tcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactatgccacttcaaaattttgcttggacgaacttgttcacattattcattg 28781272  T
Q  105 ctacaagacaaagggttgttcggttttgcctattttctatcatgtggatccta 157  Q
    |||||||||||| ||| |    ||||||||| |||||| |  |||||||||||    
T  28781273 ctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggatccta 28781325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 306
Target Start/End: Original strand, 27214649 - 27214755
Alignment:
Q  200 ctaagcatgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctacca 299  Q
    ||||||||||||| | ||| ||||||||||||||||||||| |  | ||  |  |||||||||  ||||| | ||||||||||||||| || ||||| ||    
T  27214649 ctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagctgctaacttatctggctatca 27214748  T
Q  300 ttgtagt 306  Q
    || ||||    
T  27214749 ttatagt 27214755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 306
Target Start/End: Complemental strand, 27234579 - 27234473
Alignment:
Q  200 ctaagcatgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctacca 299  Q
    ||||||||||||| | ||| ||||||||||||||||||||| |  | ||  |  |||||||||  ||||| | ||||||||||||||| || ||||| ||    
T  27234579 ctaagcatgaagagaggtttcaaaataacaaggaaaacatggagcggttgcagaaatggaagatagctcttaaccaagctgctaacttatctggctatca 27234480  T
Q  300 ttgtagt 306  Q
    || ||||    
T  27234479 ttatagt 27234473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 27665223 - 27665169
Alignment:
Q  52 aactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgct 106  Q
    ||||||||  |||||||||| ||||| || |||||||||||||||||||| ||||    
T  27665223 aactatgctacttcttcattttgtttagatgaacttgtccacatcattcattgct 27665169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 285
Target Start/End: Complemental strand, 25506961 - 25506857
Alignment:
Q  181 agttattgtgagcatcttactaagcatgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctg 280  Q
    |||||| ||||  |||| |||||||||||||| ||||| |||||||| ||| |||||||| | ||||   |||||||||| |  ||||| || ||| |||    
T  25506961 agttatggtgaagatctgactaagcatgaagagaagtttcaaaataataagaaaaacatggagagatcgcatcaatggaaaatagctctaacacaatctg 25506862  T
Q  281 ctaac 285  Q
    |||||    
T  25506861 ctaac 25506857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 28786383 - 28786423
Alignment:
Q  76 ttggacgaacttgtccacatcattcactgctacaagacaaa 116  Q
    |||||||||||||| ||||| ||||| ||||||||||||||    
T  28786383 ttggacgaacttgttcacattattcattgctacaagacaaa 28786423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 28792504 - 28792544
Alignment:
Q  76 ttggacgaacttgtccacatcattcactgctacaagacaaa 116  Q
    |||||||||||||| ||||| ||||| ||||||||||||||    
T  28792504 ttggacgaacttgttcacattattcattgctacaagacaaa 28792544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 3e-67; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 10 - 335
Target Start/End: Complemental strand, 18731639 - 18731314
Alignment:
Q  10 gccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctaca 109  Q
    ||||||||||| || | ||||||||||||  | ||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  18731639 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctaca 18731540  T
Q  110 agacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaagcatga 209  Q
    ||||||||||| ||   ||||||||| ||||||||   |||||||||| ||||||||||||||| | |||||||||| |||| ||||| ||||||||  |    
T  18731539 agacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacaa 18731440  T
Q  210 agacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagtgaa 309  Q
    | | |  ||||||||||||||| |||||||| |  | ||  |||||||||||  |||||||||| ||||||||||||| || |||||||||| |||| |     
T  18731439 aaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccattttagtcat 18731340  T
Q  310 gggtaccccactttacttaaatcttg 335  Q
    |||||| || |||||||||| |||||    
T  18731339 gggtactcctctttacttaattcttg 18731314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 10 - 335
Target Start/End: Complemental strand, 18699535 - 18699210
Alignment:
Q  10 gccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctaca 109  Q
    ||||||||||| || | ||||||||||||  | ||||||  ||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  18699535 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgttcacatcattcactgctaca 18699436  T
Q  110 agacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaagcatga 209  Q
    ||||||| ||| ||   ||||||||| ||||||||   || ||||||| ||||||||||||||| | |||||||||| |||| ||||| |||||||| |     
T  18699435 agacaaaaggtcgtctcgttttgcctgttttctatggcgtagatcctactcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacgg 18699336  T
Q  210 agacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagtgaa 309  Q
    | | |  ||||||||||||||| |||||||| |  | ||  |||||||||||   ||||||||| ||||||||||||| || |||||||||| ||||       
T  18699335 aaagagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttagctctgaccgaagctgctaacttgtccggctaccattttagttct 18699236  T
Q  310 gggtaccccactttacttaaatcttg 335  Q
    |||||| || |||||||||| |||||    
T  18699235 gggtactcctctttacttaattcttg 18699210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 10 - 335
Target Start/End: Complemental strand, 18724220 - 18723895
Alignment:
Q  10 gccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctaca 109  Q
    ||||||||||| || | ||||||||||||  | ||||||  ||||||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||    
T  18724220 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtccacatcatgcactgctaca 18724121  T
Q  110 agacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaagcatga 209  Q
    ||||||||||| ||   ||||||||| ||||||||   |||||||||| |||||||||||| || | |||||||||| |||| ||||| ||||||||  |    
T  18724120 agacaaagggtcgtcttgttttgcctgttttctatggcgtggatcctagtcacatacgacaccaaagtgggagttatggtgaacatctcactaagcacaa 18724021  T
Q  210 agacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagtgaa 309  Q
    |   |  ||||||||||||||| |||||||| |  | ||  |||||||||||  |||||||||| ||||||||||||| || |||||||||| ||||       
T  18724020 aatgagtttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccattttagtcct 18723921  T
Q  310 gggtaccccactttacttaaatcttg 335  Q
    |||||| || |||||||||| |||||    
T  18723920 gggtactcctctttacttaattcttg 18723895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 10 - 306
Target Start/End: Complemental strand, 18655612 - 18655316
Alignment:
Q  10 gccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctaca 109  Q
    |||||| |||| || | |||||| |||||  | ||||||  ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  18655612 gccattcaagagtctaggatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccgcatcattcactgctaca 18655513  T
Q  110 agacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaagcatga 209  Q
    ||||||||||| ||   ||||| ||| ||||||||   |||||||||| ||||||||||||||| ||||| |||||| |||| ||||| ||||||||       
T  18655512 agacaaagggtcgtctcgtttttcctgttttctatggcgtggatcctactcacatacgacatcaaactggaagttatggtgaacatctcactaagcacag 18655413  T
Q  210 agacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagt 306  Q
    | | || ||||||||||||||| |||||||| |  | ||  |||||||||||  |||||||||| ||||||||||||| || |||||||||| ||||    
T  18655412 aaagaatttccaaaataacaagaaaaacatggagcggttgcatcaatggaagttggctctgaccgaagctgctaacttgtccggctaccattctagt 18655316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 10 - 335
Target Start/End: Complemental strand, 18679702 - 18679377
Alignment:
Q  10 gccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctaca 109  Q
    ||||||||||| || | ||||||||||||  | ||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18679702 gccattgaagagtctaggatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 18679603  T
Q  110 agacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaagca-tg 208  Q
    ||||||||||| ||   ||||||||| ||||||||   |||||||||| ||||||| ||||||| | ||| |||||| |||| ||||| ||||| || ||    
T  18679602 agacaaagggtcgtcttgttttgcctgttttctatgtcgtggatcctactcacatatgacatcaaagtggtagttatggtgaacatctcactaatcactg 18679503  T
Q  209 aagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagtga 308  Q
    || | |  ||||||||||||||  |||||||| |  | ||  |||||||||||   ||||||||| ||||||||||||| || |||||||||| ||||      
T  18679502 aa-agagtttccaaaataacaataaaaacatggagcggttgcatcaatggaagttagctctgaccgaagctgctaacttgtccggctaccattttagtcc 18679404  T
Q  309 agggtaccccactttacttaaatcttg 335  Q
     |||||| || |||||||||| |||||    
T  18679403 tgggtactcctctttacttaattcttg 18679377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 18073804 - 18073913
Alignment:
Q  13 attgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaaga 112  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||| |    
T  18073804 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaa 18073903  T
Q  113 caaagggttg 122  Q
    | ||||||||    
T  18073904 ccaagggttg 18073913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 17989185 - 17989088
Alignment:
Q  13 attgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaa 110  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||||||  |||||||||||||||||||||||||||    
T  17989185 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaa 17989088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 53 - 191
Target Start/End: Complemental strand, 5091059 - 5090921
Alignment:
Q  53 actatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaagacaaagggttgttcggttttgcctattttctatcatgtgga 152  Q
    ||||||| |||||||| || ||||| || ||||||||||| || |||||||||| ||||  ||| |||||   |||||||||||||||||||  ||||||    
T  5091059 actatgcttcttcttcgttttgtttagatgaacttgtccatattattcactgctccaaggaaaatggttgcctggttttgcctattttctatggtgtgga 5090960  T
Q  153 tcctaatcacatacgacatcagactgggagttattgtga 191  Q
     |||  |||  | ||| |||||||||| |||||| ||||    
T  5090959 accttctcatgtgcgatatcagactggaagttatggtga 5090921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 4e-57; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 7 - 335
Target Start/End: Complemental strand, 28127817 - 28127489
Alignment:
Q  7 aaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgct 106  Q
    ||||||||||||||||| |  || || |||||  |||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  28127817 aaggccattgaagaatctagaatttttattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaacttgtgcacatcattcactgct 28127718  T
Q  107 acaagacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaagca 206  Q
    |||||||||||||| |    ||||||||| |||||| |   |||||||||| | |  | ||| |||| || ||||||||| ||||  | ||| |||||||    
T  28127717 acaagacaaagggtcgcctagttttgcctgttttctttggcgtggatcctactgatgtgcgatatcatacagggagttatggtgaagagcttgctaagca 28127618  T
Q  207 tgaagacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagt 306  Q
    || ||| | |||||||||||||||| |||||||| |  ||||  | ||||||||||  ||||| ||||||||||||||||| || |||||||||| ||||    
T  28127617 tggagagaggttccaaaataacaagaaaaacatggagcgattgcaccaatggaagatagctctaacccaagctgctaacttgtccggctaccattatagt 28127518  T
Q  307 gaagggtaccccactttacttaaatcttg 335  Q
      ||||||||| ||| |||||||||||||    
T  28127517 ccagggtaccctactatacttaaatcttg 28127489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 10 - 335
Target Start/End: Complemental strand, 268492 - 268167
Alignment:
Q  10 gccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctaca 109  Q
    ||||||||||| || | ||| || |||||  | ||||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  268492 gccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctaca 268393  T
Q  110 agacaaagggttgttcggttttgcctattttctatcatgtggatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaagcatga 209  Q
    ||| ||||||| ||    |||||||  | ||||||   |||||||||| ||||||||||||||| | |||||||||| |||| ||||| |||||||| ||    
T  268392 agaaaaagggtcgtctcattttgcccgtcttctatggcgtggatcctactcacatacgacatcaaagtgggagttatggtgaacatctcactaagcacga 268293  T
Q  210 agacaagttccaaaataacaaggaaaacatgaaaagattaaatcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagtgaa 309  Q
    ||| |  |||||||||| |||| |||||||| |  | ||  |||||||||||  |||||||||||||||| ||||||| || |||||||||| ||||       
T  268292 agagagtttccaaaatagcaagaaaaacatggagcggttgcatcaatggaagttggctctgacccaagcttctaacttgtctggctaccattctagtcgt 268193  T
Q  310 gggtaccccactttacttaaatcttg 335  Q
    ||||||  | |||||||||| |||||    
T  268192 gggtactgctctttacttaattcttg 268167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 51 - 335
Target Start/End: Complemental strand, 28164456 - 28164173
Alignment:
Q  51 caactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaagacaaagggttgttcggttttgcctattttctatcatgtg 150  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    ||||||||| |||||| |   |||    
T  28164456 caactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgcctagttttgcctgttttct-tggcgtg 28164358  T
Q  151 gatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaagcatgaagacaagttccaaaataacaaggaaaacatgaaaagattaa 250  Q
    ||||||| | |  | |||||||| || ||||||||| |  |  |||||||||||||||  || | |||||||||||||||| |||||||| |  ||||      
T  28164357 gatcctactgatgtgcgacatcatacagggagttatggcaaagatcttactaagcatggtgagaggttccaaaataacaagaaaaacatggagcgattgc 28164258  T
Q  251 atcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagtgaagggtaccccactttacttaaatcttg 335  Q
    | ||||||||||  ||||| ||||||||||||||||| || |||||||||| ||||  ||||||||  ||  |||||||||||||    
T  28164257 accaatggaagatagctctaacccaagctgctaacttgtccggctaccattatagtccagggtaccttacaatacttaaatcttg 28164173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 51 - 329
Target Start/End: Complemental strand, 29273877 - 29273599
Alignment:
Q  51 caactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaagacaaagggttgttcggttttgcctattttctatcatgtg 150  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||    |||||||| | ||||||   |||    
T  29273877 caactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagacaaagggtcgtctcattttgcctgtcttctatggcgtg 29273778  T
Q  151 gatcctaatcacatacgacatcagactgggagttattgtgagcatcttactaagcatgaagacaagttccaaaataacaaggaaaacatgaaaagattaa 250  Q
    ||||||| ||||||||||||||| | |||||||||| |||| ||||| |||||| | ||||| |  |||||||||| |||| |||||||| |  | ||      
T  29273777 gatcctactcacatacgacatcaaagtgggagttatggtgaacatctcactaagtacgaagagagtttccaaaatagcaagaaaaacatggatcggttgc 29273678  T
Q  251 atcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagtgaagggtaccccactttacttaa 329  Q
    |||||||||||  |||||||||||||||| ||||||| || |||||||||| |||| | ||||||  | ||||||||||    
T  29273677 atcaatggaagttggctctgacccaagcttctaacttgtctggctaccattctagtcatgggtactgctctttacttaa 29273599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 122
Target Start/End: Original strand, 59612 - 59721
Alignment:
Q  13 attgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaaga 112  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||| |    
T  59612 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctacaaaa 59711  T
Q  113 caaagggttg 122  Q
    | ||||||||    
T  59712 ccaagggttg 59721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 3575 - 3459
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaac-tatgcatcttcttcattatgtttggacgaacttgtccacatcattcact 103  Q
    ||||||||||||| ||||| | ||| || |||||  | ||||||  |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  3575 tcaaggccattgatgaatctaggatttttattcctgtgttttctatcaacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcact 3476  T
Q  104 gctacaagacaaagggt 120  Q
    |||||||||||||||||    
T  3475 gctacaagacaaagggt 3459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 14508 - 14394
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    ||||||||||||| ||||| | ||| || |||||  | ||||||  ||||||||| | |||||| || ||||||||||||||||||||||| ||||||||    
T  14508 tcaaggccattgatgaatctaggatttttattcctgtgttttctatcaactatgcct-ttcttcgttttgtttggacgaacttgtccacataattcactg 14410  T
Q  105 ctacaagacaaagggt 120  Q
    ||||||||||||||||    
T  14409 ctacaagacaaagggt 14394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 54 - 329
Target Start/End: Complemental strand, 4775 - 4500
Alignment:
Q  54 ctatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgctacaagacaaagggttgttcggttttgcctattttctatcatgtggat 153  Q
    |||||| | |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |    ||||||||| ||||||     |||||     
T  4775 ctatgccttttcttcgttttgtttggacgaacttgtccacataattcactgctacaagacaaagggtcgcctcgttttgcctgttttcttcggcgtggaa 4676  T
Q  154 cctaatcacatacgacatcagactgggagttattgtg-agcatcttactaagcatgaagacaagttccaaaataacaaggaaaacatgaaaagattaaat 252  Q
    |||| | || | ||||||| ||  || |||||| ||| ||||| |  || |||||||| | | ||| |||||| | ||| | |||||| | || ||  ||    
T  4675 cctactaacgtgcgacatctgaaaggtagttatggtgaagcat-tggctgagcatgaaaagaggtttcaaaatgataagaataacatggagaggttgcat 4577  T
Q  253 caatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagtgaagggtaccccactttacttaa 329  Q
    |||||||||  |||||||||||||||||||||||| || |||||||||| |||| | |||||| ||  |||||||||    
T  4576 caatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtcatgggtacgcctatttacttaa 4500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 315
Target Start/End: Complemental strand, 13539 - 13475
Alignment:
Q  251 atcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagtgaagggtac 315  Q
    |||||||||||  |||||||||||||||||||||||| || |||||||||| |||| | ||||||    
T  13539 atcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtcatgggtac 13475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 13714 - 13633
Alignment:
Q  76 ttggacgaacttgtccacatcattcactgctacaagacaaagggttgttcggttttgcctattttctatcatgtggatccta 157  Q
    |||||||||||||| ||||| ||||| |||||||||||||| ||| |    ||||||||| |||||| |  |||||||||||    
T  13714 ttggacgaacttgttcacattattcattgctacaagacaaaaggtcgcctcgttttgcctgttttctttggtgtggatccta 13633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 43000 - 43107
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| || | ||| ||||||||  | || |||  ||| ||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  43000 tcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactg 43099  T
Q  105 ctacaaga 112  Q
    || |||||    
T  43100 ctgcaaga 43107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 34759 - 34865
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| || | ||| ||||||||  | || |||  ||| ||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  34759 tcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactg 34858  T
Q  105 ctacaag 111  Q
    || ||||    
T  34859 cttcaag 34865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 27482 - 27588
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||| |||||||||||| | ||| ||||||||  | || |||  ||| ||||| ||||||||||| || |||||||||||||||||||||||||| ||    
T  27482 tcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcattg 27581  T
Q  105 ctacaag 111  Q
    || ||||    
T  27582 cttcaag 27588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 116830 - 116931
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||||||||| || | ||| |||||||| || || |||  ||| ||||| |||||||| || || ||||| |||||||||||||| ||||||||    
T  116830 tcaaggccattgaagagtctaggattttcattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactg 116929  T
Q  105 ct 106  Q
    ||    
T  116930 ct 116931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 58435 - 58334
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    ||||||||||| |||| || | ||| ||||||||| | || |||  ||||||||| ||||||||||| || ||| |||||||||||||||||||||||||    
T  58435 tcaaggccattaaagagtctaggattttcattcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttgtccacatcattcactg 58336  T
Q  105 ct 106  Q
    ||    
T  58335 ct 58334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 3279722 - 3279823
Alignment:
Q  5 tcaaggccattgaagaatccacgatcttcattcccatattttctgccaactatgcatcttcttcattatgtttggacgaacttgtccacatcattcactg 104  Q
    |||||||||| ||||| |||| ||| || |||||  | || |||  ||||||||| ||||||  ||| ||||||||||||||||||||||||||||| ||    
T  3279722 tcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttgtttggacgaacttgtccacatcattcattg 3279821  T
Q  105 ct 106  Q
    ||    
T  3279822 ct 3279823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 17993789 - 17993736
Alignment:
Q  53 actatgcatcttcttcattatgtttggacgaacttgtccacatcattcactgct 106  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  17993789 actatgcttcttcttcattttgtttagacgaacttgtccacatcattcaatgct 17993736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 315
Target Start/End: Original strand, 7805 - 7869
Alignment:
Q  251 atcaatggaagaaggctctgacccaagctgctaacttttcaggctaccattgtagtgaagggtac 315  Q
    |||||||||||  |||||||||||||||||||||||| || |||||||||| |||| | ||||||    
T  7805 atcaatggaagttggctctgacccaagctgctaacttgtccggctaccattctagtcatgggtac 7869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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