View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3642_high_3 (Length: 237)

Name: NF3642_high_3
Description: NF3642
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3642_high_3
NF3642_high_3
[»] chr5 (32 HSPs)
chr5 (1-221)||(11181777-11181999)
chr5 (1-216)||(19588676-19588893)
chr5 (2-216)||(42127361-42127576)
chr5 (1-216)||(3880230-3880446)
chr5 (1-216)||(28832189-28832403)
chr5 (1-175)||(24553499-24553673)
chr5 (7-215)||(17003911-17004121)
chr5 (1-215)||(12084127-12084343)
chr5 (1-216)||(11916922-11917139)
chr5 (1-215)||(14520159-14520375)
chr5 (4-216)||(6741784-6741998)
chr5 (43-216)||(10281722-10281898)
chr5 (1-216)||(33030891-33031109)
chr5 (1-215)||(31300547-31300763)
chr5 (1-215)||(15464461-15464678)
chr5 (1-215)||(9353284-9353499)
chr5 (1-215)||(36932301-36932517)
chr5 (1-209)||(7160861-7161068)
chr5 (5-179)||(2630165-2630341)
chr5 (7-108)||(28278450-28278553)
chr5 (7-75)||(38747173-38747241)
chr5 (110-215)||(38192214-38192319)
chr5 (110-215)||(38219439-38219544)
chr5 (142-216)||(33831694-33831768)
chr5 (83-136)||(15552461-15552515)
chr5 (83-136)||(31179380-31179434)
chr5 (83-136)||(31542950-31543004)
chr5 (83-136)||(31545296-31545350)
chr5 (147-217)||(8566031-8566101)
chr5 (142-175)||(40147316-40147349)
chr5 (142-175)||(42926922-42926955)
chr5 (142-178)||(5887496-5887532)
[»] chr3 (56 HSPs)
chr3 (1-216)||(40844582-40844798)
chr3 (1-216)||(18552823-18553040)
chr3 (1-216)||(3328297-3328513)
chr3 (1-216)||(37466221-37466437)
chr3 (13-216)||(1736245-1736450)
chr3 (2-215)||(21711154-21711368)
chr3 (1-216)||(40592722-40592940)
chr3 (1-216)||(3715942-3716159)
chr3 (1-216)||(48438144-48438361)
chr3 (4-216)||(24695104-24695317)
chr3 (1-216)||(1417431-1417647)
chr3 (1-216)||(26298918-26299135)
chr3 (1-215)||(8370428-8370644)
chr3 (1-216)||(25795710-25795928)
chr3 (4-213)||(30709733-30709945)
chr3 (1-164)||(25929435-25929599)
chr3 (16-215)||(6794654-6794855)
chr3 (2-216)||(4386868-4387084)
chr3 (38-216)||(36029060-36029240)
chr3 (1-215)||(16264279-16264495)
chr3 (1-215)||(27974893-27975109)
chr3 (1-215)||(35925412-35925625)
chr3 (58-216)||(47923845-47924006)
chr3 (91-214)||(3323633-3323756)
chr3 (1-153)||(27986449-27986603)
chr3 (1-153)||(33386669-33386824)
chr3 (1-153)||(39039995-39040150)
chr3 (123-216)||(8126684-8126777)
chr3 (111-216)||(21353604-21353708)
chr3 (1-215)||(32143251-32143467)
chr3 (7-108)||(34491346-34491449)
chr3 (1-215)||(26928541-26928757)
chr3 (27-168)||(27452914-27453056)
chr3 (124-164)||(25929365-25929405)
chr3 (142-178)||(32744516-32744552)
chr3 (156-216)||(47649656-47649716)
chr3 (1-52)||(8126631-8126682)
chr3 (142-217)||(760860-760935)
chr3 (142-217)||(22835082-22835157)
chr3 (142-217)||(32891116-32891192)
chr3 (142-217)||(39153441-39153516)
chr3 (1-168)||(1305879-1306046)
chr3 (83-209)||(29100172-29100299)
chr3 (1-52)||(27026875-27026925)
chr3 (1-52)||(27038220-27038270)
chr3 (83-136)||(746953-747007)
chr3 (129-179)||(5366301-5366351)
chr3 (83-136)||(6063453-6063507)
chr3 (142-217)||(46860487-46860562)
chr3 (83-136)||(50494195-50494249)
chr3 (142-175)||(4570007-4570040)
chr3 (147-217)||(34491225-34491295)
chr3 (142-175)||(51398869-51398902)
chr3 (146-175)||(53921587-53921616)
chr3 (142-215)||(9581297-9581370)
chr3 (142-178)||(23391989-23392025)
[»] chr7 (39 HSPs)
chr7 (1-216)||(29159733-29159950)
chr7 (1-216)||(46516260-46516477)
chr7 (1-216)||(20284019-20284235)
chr7 (1-216)||(33332400-33332617)
chr7 (4-216)||(2647646-2647860)
chr7 (1-216)||(23402964-23403180)
chr7 (4-216)||(55881-56094)
chr7 (1-216)||(4796617-4796834)
chr7 (1-216)||(5817221-5817437)
chr7 (1-216)||(9189958-9190175)
chr7 (1-214)||(49091592-49091806)
chr7 (1-219)||(35960746-35960966)
chr7 (7-216)||(28617176-28617386)
chr7 (1-216)||(3047186-3047401)
chr7 (1-216)||(21983213-21983432)
chr7 (1-216)||(2580317-2580536)
chr7 (1-213)||(2479267-2479479)
chr7 (1-168)||(21988837-21989006)
chr7 (1-153)||(9185178-9185330)
chr7 (1-215)||(44848636-44848851)
chr7 (2-75)||(9235648-9235721)
chr7 (16-108)||(22270107-22270201)
chr7 (1-147)||(47263608-47263754)
chr7 (1-215)||(18413571-18413785)
chr7 (153-216)||(9235533-9235596)
chr7 (92-215)||(21646028-21646152)
chr7 (151-217)||(24525985-24526052)
chr7 (42-104)||(30814574-30814637)
chr7 (142-217)||(2361052-2361127)
chr7 (110-215)||(21639849-21639954)
chr7 (142-217)||(29608750-29608825)
chr7 (83-136)||(31155920-31155974)
chr7 (142-217)||(38671302-38671377)
chr7 (142-217)||(48599414-48599489)
chr7 (142-175)||(8153397-8153430)
chr7 (142-216)||(23565141-23565216)
chr7 (142-178)||(3259047-3259083)
chr7 (149-216)||(4538627-4538694)
chr7 (146-178)||(25615905-25615937)
[»] chr6 (27 HSPs)
chr6 (1-216)||(10077115-10077332)
chr6 (1-216)||(4629883-4630101)
chr6 (1-216)||(31979443-31979660)
chr6 (1-216)||(18232775-18232992)
chr6 (1-176)||(22963630-22963806)
chr6 (1-176)||(23824587-23824763)
chr6 (11-216)||(24435921-24436127)
chr6 (27-216)||(5572191-5572382)
chr6 (38-216)||(31086423-31086603)
chr6 (1-216)||(5017430-5017635)
chr6 (1-215)||(5757430-5757645)
chr6 (1-216)||(21801294-21801516)
chr6 (1-153)||(31936517-31936671)
chr6 (1-215)||(21355966-21356182)
chr6 (1-216)||(31076892-31077108)
chr6 (84-216)||(14521688-14521819)
chr6 (23-153)||(27165635-27165767)
chr6 (2-153)||(22708949-22709102)
chr6 (111-216)||(1115055-1115159)
chr6 (142-217)||(2973019-2973094)
chr6 (142-217)||(5043640-5043715)
chr6 (83-136)||(12195524-12195578)
chr6 (158-217)||(16569046-16569106)
chr6 (147-217)||(17763003-17763073)
chr6 (83-136)||(26065233-26065286)
chr6 (83-136)||(26085202-26085255)
chr6 (148-217)||(28137494-28137563)
[»] chr4 (50 HSPs)
chr4 (1-216)||(10047309-10047526)
chr4 (1-216)||(6743366-6743582)
chr4 (1-216)||(54867114-54867330)
chr4 (2-216)||(42599523-42599740)
chr4 (16-215)||(36315181-36315381)
chr4 (16-215)||(36329390-36329590)
chr4 (1-169)||(39245924-39246094)
chr4 (1-216)||(38152389-38152605)
chr4 (59-221)||(39774250-39774414)
chr4 (1-216)||(3796469-3796687)
chr4 (1-216)||(24333742-24333957)
chr4 (59-221)||(18377348-18377511)
chr4 (1-216)||(25861983-25862189)
chr4 (1-216)||(5147607-5147824)
chr4 (1-214)||(5269154-5269358)
chr4 (38-216)||(16623243-16623424)
chr4 (16-167)||(34495822-34495974)
chr4 (1-215)||(5396623-5396839)
chr4 (1-216)||(3777480-3777695)
chr4 (1-216)||(5143189-5143406)
chr4 (1-203)||(16630643-16630847)
chr4 (59-216)||(5112226-5112383)
chr4 (1-215)||(31985585-31985800)
chr4 (59-218)||(1983249-1983408)
chr4 (5-153)||(8689498-8689647)
chr4 (142-217)||(31474163-31474239)
chr4 (124-216)||(37781917-37782008)
chr4 (83-136)||(18709173-18709227)
chr4 (1-153)||(28468542-28468695)
chr4 (83-136)||(18847423-18847476)
chr4 (83-136)||(22134627-22134680)
chr4 (16-55)||(21688436-21688475)
chr4 (142-217)||(379393-379468)
chr4 (142-217)||(8665421-8665496)
chr4 (142-217)||(12073405-12073480)
chr4 (83-136)||(16931798-16931852)
chr4 (83-136)||(16934152-16934206)
chr4 (83-136)||(22780382-22780436)
chr4 (83-136)||(22782747-22782801)
chr4 (83-136)||(44599847-44599901)
chr4 (142-217)||(52467434-52467509)
chr4 (142-216)||(5871834-5871908)
chr4 (142-175)||(6656011-6656044)
chr4 (142-175)||(24969167-24969200)
chr4 (142-175)||(26364291-26364324)
chr4 (142-175)||(35662496-35662529)
chr4 (147-217)||(45687267-45687338)
chr4 (142-175)||(46147471-46147504)
chr4 (142-175)||(48893718-48893751)
chr4 (142-175)||(50673927-50673960)
[»] chr1 (47 HSPs)
chr1 (1-218)||(47098773-47098991)
chr1 (1-216)||(19072857-19073075)
chr1 (1-216)||(19120747-19120965)
chr1 (2-216)||(16124466-16124683)
chr1 (1-216)||(29651741-29651958)
chr1 (1-216)||(13598328-13598545)
chr1 (1-216)||(47703886-47704103)
chr1 (16-216)||(9476206-9476408)
chr1 (1-176)||(27104362-27104539)
chr1 (1-208)||(47102800-47103008)
chr1 (1-215)||(26644849-26645065)
chr1 (1-154)||(775602-775757)
chr1 (1-216)||(32889368-32889586)
chr1 (1-216)||(17345470-17345686)
chr1 (1-215)||(3281637-3281853)
chr1 (59-216)||(22819416-22819575)
chr1 (2-215)||(37069700-37069912)
chr1 (2-211)||(21536525-21536736)
chr1 (1-212)||(9023794-9023999)
chr1 (4-215)||(13604574-13604788)
chr1 (1-103)||(50521165-50521270)
chr1 (136-215)||(40816765-40816844)
chr1 (1-56)||(40816844-40816899)
chr1 (142-217)||(8550867-8550942)
chr1 (83-136)||(47179929-47179982)
chr1 (110-215)||(19358794-19358899)
chr1 (110-215)||(24202720-24202825)
chr1 (1-168)||(19361431-19361599)
chr1 (1-168)||(19380071-19380239)
chr1 (83-136)||(47177578-47177631)
chr1 (115-176)||(48382471-48382532)
chr1 (80-188)||(35109515-35109623)
chr1 (142-178)||(40122278-40122314)
chr1 (83-136)||(9459428-9459482)
chr1 (83-136)||(9463255-9463309)
chr1 (83-136)||(16226383-16226437)
chr1 (83-136)||(16231779-16231833)
chr1 (142-175)||(193666-193699)
chr1 (80-136)||(2617732-2617789)
chr1 (142-175)||(10925278-10925311)
chr1 (83-112)||(13137985-13138014)
chr1 (80-216)||(32736947-32737083)
chr1 (142-175)||(42298055-42298088)
chr1 (142-175)||(50169290-50169323)
chr1 (142-178)||(196988-197024)
chr1 (142-178)||(834247-834283)
chr1 (83-127)||(17319113-17319157)
[»] chr2 (44 HSPs)
chr2 (1-216)||(20522150-20522367)
chr2 (1-216)||(31055972-31056191)
chr2 (1-216)||(33118066-33118283)
chr2 (1-216)||(10445394-10445611)
chr2 (2-216)||(33528576-33528787)
chr2 (1-216)||(17865133-17865350)
chr2 (1-216)||(39482861-39483078)
chr2 (26-216)||(21629899-21630090)
chr2 (1-216)||(2869643-2869861)
chr2 (1-216)||(34682284-34682501)
chr2 (1-216)||(8039990-8040209)
chr2 (1-216)||(8390100-8390316)
chr2 (42-216)||(14698958-14699133)
chr2 (4-211)||(13569262-13569470)
chr2 (70-221)||(40014925-40015077)
chr2 (1-213)||(10707205-10707418)
chr2 (5-182)||(16940193-16940372)
chr2 (5-182)||(17010858-17011037)
chr2 (1-216)||(34388789-34388997)
chr2 (1-215)||(23078422-23078638)
chr2 (1-215)||(28259129-28259344)
chr2 (1-216)||(42039619-42039837)
chr2 (83-172)||(2838024-2838114)
chr2 (59-216)||(15903841-15903997)
chr2 (1-215)||(36757714-36757930)
chr2 (59-173)||(1345533-1345652)
chr2 (59-198)||(27149263-27149402)
chr2 (5-180)||(35397445-35397622)
chr2 (1-153)||(40738774-40738926)
chr2 (92-215)||(25398517-25398641)
chr2 (92-215)||(25403655-25403779)
chr2 (110-215)||(3491791-3491896)
chr2 (142-217)||(11151671-11151746)
chr2 (142-217)||(11690514-11690589)
chr2 (110-215)||(25407663-25407768)
chr2 (142-217)||(42362365-42362440)
chr2 (1-35)||(14699127-14699161)
chr2 (83-136)||(35215595-35215649)
chr2 (83-136)||(35217972-35218026)
chr2 (142-212)||(723824-723894)
chr2 (142-216)||(14633906-14633980)
chr2 (159-216)||(28770725-28770781)
chr2 (142-175)||(36773617-36773650)
chr2 (83-136)||(42452973-42453026)
[»] chr8 (34 HSPs)
chr8 (16-216)||(23799527-23799729)
chr8 (1-216)||(26403180-26403397)
chr8 (1-216)||(6127150-6127368)
chr8 (1-216)||(19752344-19752561)
chr8 (1-216)||(5702433-5702650)
chr8 (1-216)||(6813612-6813830)
chr8 (1-216)||(4696557-4696763)
chr8 (1-215)||(4455957-4456173)
chr8 (10-216)||(9054788-9054995)
chr8 (1-215)||(7412270-7412486)
chr8 (1-136)||(9765849-9765987)
chr8 (49-216)||(3051097-3051266)
chr8 (16-215)||(28307507-28307707)
chr8 (1-168)||(19175753-19175922)
chr8 (1-215)||(31071180-31071397)
chr8 (142-217)||(30291619-30291695)
chr8 (133-188)||(5990539-5990594)
chr8 (127-210)||(7493130-7493212)
chr8 (92-168)||(1261953-1262029)
chr8 (142-218)||(18141833-18141908)
chr8 (142-217)||(1292543-1292618)
chr8 (142-217)||(3303750-3303825)
chr8 (148-178)||(3772244-3772274)
chr8 (142-217)||(4162510-4162585)
chr8 (83-136)||(43079874-43079928)
chr8 (83-136)||(43082245-43082299)
chr8 (142-175)||(10015136-10015169)
chr8 (142-175)||(11384040-11384073)
chr8 (83-136)||(28283230-28283283)
chr8 (148-217)||(6598985-6599054)
chr8 (148-217)||(6674438-6674507)
chr8 (147-175)||(18106163-18106191)
chr8 (152-217)||(40328792-40328857)
chr8 (142-178)||(41364927-41364963)
[»] scaffold0006 (3 HSPs)
scaffold0006 (1-216)||(5613-5830)
scaffold0006 (1-216)||(2422-2639)
scaffold0006 (4-215)||(133231-133445)
[»] scaffold0148 (1 HSPs)
scaffold0148 (1-208)||(10659-10868)
[»] scaffold0176 (2 HSPs)
scaffold0176 (4-216)||(17196-17410)
scaffold0176 (142-175)||(18083-18116)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-216)||(85614-85829)
[»] scaffold0087 (2 HSPs)
scaffold0087 (1-215)||(43913-44128)
scaffold0087 (1-215)||(36784-37000)
[»] scaffold0140 (1 HSPs)
scaffold0140 (1-209)||(8376-8587)
[»] scaffold0078 (2 HSPs)
scaffold0078 (59-221)||(23518-23683)
scaffold0078 (90-153)||(43274-43338)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-145)||(45183-45329)
[»] scaffold0184 (1 HSPs)
scaffold0184 (90-153)||(29506-29570)
[»] scaffold0016 (1 HSPs)
scaffold0016 (144-216)||(102445-102516)
[»] scaffold0267 (1 HSPs)
scaffold0267 (83-136)||(266-320)
[»] scaffold0188 (2 HSPs)
scaffold0188 (110-168)||(17951-18008)
scaffold0188 (110-168)||(24044-24101)
[»] scaffold0472 (1 HSPs)
scaffold0472 (80-136)||(6424-6481)
[»] scaffold0286 (1 HSPs)
scaffold0286 (142-175)||(11612-11645)
[»] scaffold0219 (1 HSPs)
scaffold0219 (142-175)||(27523-27556)


Alignment Details
Target: chr5 (Bit Score: 164; Significance: 9e-88; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 11181999 - 11181777
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggtaactcagttcggtccaatatga 100  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||  ||||||||| |||||||    
T  11181999 gtgtagagcaataccacaagcataatcaaagcaataaagataagcaatgaaagaaatgaacaaacacaccaagatggtaacctagttcggtctaatatga 11181900  T
Q  101 cctactctaggg--agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  11181899 cctactctagggggagagagcaaccctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcctaaaagctctcaaatgaacaagac 11181800  T
Q  199 ctaatctctacccattttcatgt 221  Q
    ||||| |||||||||||||||||    
T  11181799 ctaatttctacccattttcatgt 11181777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 19588676 - 19588893
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||| ||  || |||||||||||||||||    
T  19588676 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaaacactcaaagattgttgacccagttcggtccaatatg 19588775  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    | ||| ||| ||||||||||||| |||||||||||||| |||||||||| |||||| |||||||||||||||| |||| |||||  || |||||||||||    
T  19588776 aactaatcttagggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattaccttataagcttacacaagaacaagac 19588875  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||| ||||    
T  19588876 ctaatttctacccttttt 19588893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 2 - 216
Target Start/End: Complemental strand, 42127576 - 42127361
Alignment:
Q  2 tgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatga 100  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| || | || ||||||| || |||||||    
T  42127576 tgtagagcaacaccacaagcataatcaaaacaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcgatctaatatga 42127477  T
Q  101 cctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacc 199  Q
    |||| |||  |||||||||||| || |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||  |||||||||||| ||    
T  42127476 cctaatctgggggagagagcagccccccaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttataagcttacaaaagaacaagtcc 42127378  T
Q  200 taatctctacccatttt 216  Q
    || | ||||||||||||    
T  42127377 tactttctacccatttt 42127361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 3880230 - 3880446
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||  | ||||||| ||||||||||    
T  3880230 gtgtaaagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaa-cacaccaagattgttgattcagttctgtccaatatg 3880328  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||||||| ||| |||||  || |||||||||||    
T  3880329 acctaatctgaggcagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagtttacaagcttacacaagaacaagac 3880428  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  3880429 ctaatttctacccatttt 3880446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 28832189 - 28832403
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||  |||||||||||||||| || | || | |||||||||||||||    
T  28832189 gtgtagagcaacaccacaagcataatcaaatcaataaagataagcaatgaaagaaacaaacaaacacaccaagattgttgacccggttcggtccaatatg 28832288  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||  |||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||    ||||||||||||      
T  28832289 acctaatctgggggagagagcagccctccaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttataag--tacaaaagaacaagtt 28832385  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  28832386 ctaatttctacccatttt 28832403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 24553673 - 24553499
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |  |||||||||||||||||    
T  24553673 gtgtagagaaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttgatccagttcggtccaatatg 24553574  T
Q  100 acctactcta-gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagctt 175  Q
    ||||| |||| |||||||||||| |||||| |||||||||||||||||| ||| |||||||||||||||||||||||    
T  24553573 acctaatctatgggagagagcag-cctccactccactaagatgaaagtgttac-aatgagttacaagaaattagctt 24553499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 7 - 215
Target Start/End: Complemental strand, 17004121 - 17003911
Alignment:
Q  7 agcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatgacctac 105  Q
    |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| || | || ||||||||||||||||||||||     
T  17004121 agcaacaccacaagcataatcaaagcaaaaaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaa 17004022  T
Q  106 tct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatc 204  Q
    |||  ||||||||||||  || |||||||||| |||||||||  | |||| ||||||||| |||||| |||| |||||  || ||||||||||||||||     
T  17004021 tctgggggagagagcagctcttcaatccactatgatgaaagtatttcaaaagagttacaaaaaattaacttacaagcttacacaagaacaagacctaatt 17003922  T
Q  205 tctacccattt 215  Q
    |||||||||||    
T  17003921 tctacccattt 17003911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 12084343 - 12084127
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagat---ggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||||||||||||||||  | ||||||||||||||||||||||||||||||||||| ||   | | || |||||||||||| ||    
T  12084343 gtgtagagcaacaccacaagcataatcaaagcacaa-agataagcaatgaaagaaaggaacaaacacaccaaaatattgttgacccagttcggtccacta 12084245  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| | | ||| |||||||||  ||||||||||||| |||||||||| |||||| |||||||||||||||| ||||||||||  || |||||||||    
T  12084244 tgacctaatatggggcagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattaacttaaaagcttacacaagaacaag 12084146  T
Q  197 acctaatctctacccattt 215  Q
    ||||||| |||||||||||    
T  12084145 acctaatttctacccattt 12084127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 11917139 - 11916922
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| |||||||||| ||  |||||| ||||||||||||| ||||||||||||||||||| |||| ||  || |||||||||||||||||    
T  11917139 gtgtagagcaacaccacaagcataaacagtgcaataaagataagcaatgagagaaaggaacaaacacaccgagattgttgacccagttcggtccaatatg 11917040  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| | | ||| |||||||||  |||||||||||||  ||||||||| |||||| ||||||||||||| ||| ||  |||||  || |||||||||||    
T  11917039 acctaatatgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaaaatagtttgcaagcttacacaagaacaagac 11916940  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  11916939 ctaatttctacccatttt 11916922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 14520159 - 14520375
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||| |||||||  | ||||||||| ||||||||||||||||||||||||| |   || | || |||||||||||||||    
T  14520159 gtgtagagcaacaccacaagcataaacaaagcacaa-agataagcactgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaata 14520257  T
Q  98 tgacctactctagggag-agagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| ||||||| | |||||||  || |||||||||| |||||||||| |||||| ||||||||||||| ||||||  |||||  || |||||||||    
T  14520258 tgacctaatctaggggggagagcagctcttcaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgcaagcttacacaagaacaag 14520356  T
Q  197 acctaatctctacccattt 215  Q
    ||||||| |||||||||||    
T  14520357 acctaatttctacccattt 14520375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 6741784 - 6741998
Alignment:
Q  4 tagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaa-gatggt-aactcagttcggtccaatatgac 101  Q
    |||| |||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||  | ||| ||||||||| |||||||||    
T  6741784 tagaacaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaatgaacaaacacaccaaagattattaacacagttcggttcaatatgac 6741883  T
Q  102 ctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacct 200  Q
     |||||| ||| | |||||||  |||||||||| ||||||| ||||||||||||  |||||||||||||||||||  || ||| | ||||||||| ||||    
T  6741884 atactctgggggatagagcagctctccaatccattaagatggaagtgatacaaagaagttacaagaaattagcttgcaaactcac-aaagaacaaaacct 6741982  T
Q  201 aatctctacccatttt 216  Q
    ||| ||||| ||||||    
T  6741983 aatttctactcatttt 6741998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 216
Target Start/End: Original strand, 10281722 - 10281898
Alignment:
Q  43 agcaatgaaagaaaggaacaaacacaccaa-gatggta-actcagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccactaaga 139  Q
    ||||| |||||||||||||||||||||||| ||| ||  || |||||||||||||||||||||  ||| ||| |||||||||  ||||||||||||| ||    
T  10281722 agcaaagaaagaaaggaacaaacacaccaaagattgttgacccagttcggtccaatatgacctgatctgggggagagagcagctctccaatccactatga 10281821  T
Q  140 tgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||||||| |||||| ||||||||||||||||||||| |||||  || |||||||||||||||| ||||||||||||    
T  10281822 tgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagacctaatttctacccatttt 10281898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 33031109 - 33030891
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaag-aaaggaacaaacacaccaa-gatggt-aactcagttcggtccaata 97  Q
    ||||||||||| || || || ||||||||||||||| |||||| ||||||||  ||||||||||||||| ||| ||| || || ||||||||||| ||||    
T  33031109 gtgtagagcaataccacgagaataatcaaagcaataaagataaccaatgaaaataaaggaacaaacacatcaaagattgttaattcagttcggtcaaata 33031010  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    |||| |||||| ||| |||||||||  ||||||| |||||||||||||||||| |||  | |||||||||||||||||||||||||| | |||||||||     
T  33031009 tgacatactctgggggagagagcagctctccaattcactaagatgaaagtgatgcaatggggttacaagaaattagcttaaaagctcac-aaagaacaaa 33030911  T
Q  197 acctaatctctacccatttt 216  Q
    || |||| ||||||||||||    
T  33030910 acataatttctacccatttt 33030891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 31300763 - 31300547
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| |||||  |||||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||  || |||||||||||||||||    
T  31300763 gtgtagagcaacaccacaagtgtaatcaaaacaataaagataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcggtccaatatg 31300664  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaat-tagcttaaaagctctcaaaagaacaaga 197  Q
    ||||| ||| |||||||||| |   |||||||||||||||||||||||| || || |||||| |||||||  ||| ||  |||||  || |||||||||     
T  31300663 acctagtctgagggagagagaaactctccaatccactaagatgaaagtgttataa-tgagttgcaagaaaaatagtttgcaagcttacacaagaacaagt 31300565  T
Q  198 cctaatctctacccattt 215  Q
    |||||| |||||||||||    
T  31300564 cctaatttctacccattt 31300547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 15464461 - 15464678
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||| |||| |||| ||||| |||||||||||||||||| | |||||||||||||| |   || | || |||||||||||||||    
T  15464461 gtgtagagcaacaccacaagtataaccaaaacaataaagataagcaatgaaagaa-gaaacaaacacaccaaaagattgttgacccagttcggtccaata 15464559  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaa 195  Q
    ||| ||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| |||||||||| ||| ||||||  |||||  || ||||||||    
T  15464560 tgatctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaaatagcttgcaagcttacacaagaacaa 15464658  T
Q  196 gacctaatctctacccattt 215  Q
    |||||||| |||||||||||    
T  15464659 gacctaatttctacccattt 15464678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 9353499 - 9353284
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||  ||||| || | |||||||||||||||||| |||||||||||||||| |   || | || |||||||||||||||    
T  9353499 gtgtagagcaacaccacaagcatatacaaag-aacaaagataagcaatgaaagaa-ggaacaaacacaccaaaagattgttgacccagttcggtccaata 9353402  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| |||||||||||||  |||||  |||||  || |||||||||    
T  9353401 tgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaaaagcttgcaagcttacacaagaacaag 9353303  T
Q  197 acctaatctctacccattt 215  Q
    | ||||| |||||||||||    
T  9353302 atctaatttctacccattt 9353284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 36932517 - 36932301
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||| ||||| || | ||||||||||||||| ||||||||||||||||||| |   || | || |||||||||||||||    
T  36932517 gtgtagagcaacaccacaagcataaacaaag-aacaaagataagcaatgaaa-aaaggaacaaacacaccaaaagattgttgacccagttcggtccaata 36932420  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaat-tagcttaaaagctctcaaaagaacaa 195  Q
    ||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| |||||||||||||  ||||||  ||| |  || ||||||||    
T  36932419 tgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaaatagcttgcaagtttacataagaacaa 36932321  T
Q  196 gacctaatctctacccattt 215  Q
    ||| |||| |||||||||||    
T  36932320 gacttaatttctacccattt 36932301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 7161068 - 7160861
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaa-caaacacaccaagatggtaactcagttcggtccaatatg 99  Q
    ||||| |||||||| ||| ||||||||||||||| | | ||||| || | ||||||| || |||||||||||| |||||||  ||||| | | |||||||    
T  7161068 gtgtaaagcaacaccacaggcataatcaaagcaacaaa-ataagaaa-gcaagaaagaaaacaaacacaccaaaatggtaatccagtttgattcaatatg 7160971  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||||| ||||| ||||| |||  |||||||||||| |||||||||||||||||| | ||||||| ||||||| || ||||||| | ||||||||||||    
T  7160970 acctactataggggagagatcagctctccaatccactcagatgaaagtgatacaaaggggttacaaaaaattagatttaaagctcac-aaagaacaagac 7160872  T
Q  199 ctaatctctac 209  Q
     |||| |||||    
T  7160871 ttaatttctac 7160861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 5 - 179
Target Start/End: Original strand, 2630165 - 2630341
Alignment:
Q  5 agagcaacactacaagcataatcaaagcaatatagataagcaatgaa-agaaaggaacaaacacaccaagatggt-aactcagttcggtccaatatgacc 102  Q
    |||||||||| ||||||||| | ||||||||| ||||||| || ||| ||||   ||||||| || ||| || || |||  |||||||||||||||||||    
T  2630165 agagcaacaccacaagcatatttaaagcaatagagataag-aaggaagagaataaaacaaacgcatcaatattgttaacctagttcggtccaatatgacc 2630263  T
Q  103 tactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaa 179  Q
    | || | ||||||| |||||  || |||||||||| ||||||||||||||||| | ||||||| ||||||||||||||    
T  2630264 tgctttgagggagatagcagctcttcaatccactatgatgaaagtgatacaaaagggttacaataaattagcttaaaa 2630341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 28278553 - 28278450
Alignment:
Q  7 agcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga--tggtaactcagttcggtccaatatgaccta 104  Q
    ||||| || |||| |||||||||||||||| |||||||||||||||||||| || |||||||||||||  || | || |||||||||||||  |||||||    
T  28278553 agcaaaaccacaatcataatcaaagcaataaagataagcaatgaaagaaagaaagaaacacaccaagaattgttcacccagttcggtccaacttgaccta 28278454  T
Q  105 ctct 108  Q
    ||||    
T  28278453 ctct 28278450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 38747241 - 38747173
Alignment:
Q  7 agcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagat 75  Q
    ||||| || |||| |||||||||||||||| ||||||||||| |||||||||||||||  |||||||||    
T  38747241 agcaaaaccacaatcataatcaaagcaataaagataagcaattaaagaaaggaacaaatccaccaagat 38747173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 38192214 - 38192319
Alignment:
Q  110 gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaagacctaatctcta 208  Q
    ||||||||||||  ||||||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||  || ||||||||| |||| | ||||    
T  38192214 gggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaaaatagcttgcaagcttacacaagaacaagtcctagtttcta 38192312  T
Q  209 cccattt 215  Q
    |||||||    
T  38192313 cccattt 38192319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 38219439 - 38219544
Alignment:
Q  110 gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaagacctaatctcta 208  Q
    ||||||||||||  ||||||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||  || ||||||||| |||| | ||||    
T  38219439 gggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaaaatagcttgcaagcttacacaagaacaagtcctagtttcta 38219537  T
Q  209 cccattt 215  Q
    |||||||    
T  38219538 cccattt 38219544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 33831768 - 33831694
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||| |||||||||| ||||||||||||||||||||  |||||| | ||||||||| ||||||| ||||||||||||    
T  33831768 aaagagatacaaatgggttacaagaaattagcttaaacaagctcac-aaagaacaa-acctaatttctacccatttt 33831694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 15552515 - 15552461
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  15552515 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 15552461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 31179380 - 31179434
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  31179380 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 31179434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 31543004 - 31542950
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  31543004 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 31542950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 31545350 - 31545296
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  31545350 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 31545296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 8566031 - 8566101
Alignment:
Q  147 gatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||||||||| ||||||||||||||||||||  |||||| | ||||||||| ||||||  |||||||||||||    
T  8566031 gatacaaatgggttacaagaaattagcttaaacaagctcac-aaagaacaa-acctaagttctacccattttc 8566101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 40147349 - 40147316
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  40147349 aaagagatacaaatgagttacaagaaattagctt 40147316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 42926955 - 42926922
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  42926955 aaagagatacaaatgagttacaagaaattagctt 42926922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 5887496 - 5887532
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaaa 178  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  5887496 aaagtgatacaaatgggttgcaagaaattagcttaaa 5887532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 40844582 - 40844798
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||| ||  | ||||||||||||||||||    
T  40844582 gtgtagagcaacactacaagcataatcaaagcaataaagataagcaatgaaagaaatgaacgaacacaccaagattgttgattcagttcggtccaatatg 40844681  T
Q  100 acctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacc 199  Q
    ||||| ||| |||||||||||| |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || ||||||||||||    
T  40844682 acctaatctggggagagagcagccctcaaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacc 40844781  T
Q  200 taatctctacccatttt 216  Q
    |||| ||||||||||||    
T  40844782 taatttctacccatttt 40844798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 18553040 - 18552823
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| |||| |||||||||||||||| |||||| |||||||||||||||||||| |||||||||| ||  || |||||||||||||||||    
T  18553040 gtgtagagcaacaccacaaacataatcaaagcaataaagataatcaatgaaagaaaggaacaaatacaccaagattgttgacccagttcggtccaatatg 18552941  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| ||||||||| |||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || |||||||||||    
T  18552940 acctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagac 18552841  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  18552840 ctaatttctacccatttt 18552823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 3328513 - 3328297
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||| || | || ||||||  |||||||||    
T  3328513 gtgtagagcaacaccacaagcataatcaaaacaataaagataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcattccaatatg 3328414  T
Q  100 acctactctag-ggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||||| ||||||||||| ||| ||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||  |||||||||||| |    
T  3328413 acctaatctagaggagagagcagcccttcaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttataagcttacaaaagaacaagtc 3328315  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  3328314 ctaatttctacccatttt 3328297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 37466221 - 37466437
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || | || |||||||||||||||||    
T  37466221 gtgtagagcaacattacaagcataatcaaagcaataaagataagcaatgaaagaaatgaacaaacacaccaagattgttgacacagttcggtccaatatg 37466320  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||  ||||||||| || ||||||||||||||||||||||||| ||| |||||||||||||||||||  ||| |||||  |||||||||||| |    
T  37466321 acctaatctgggggagagagtagccctccaatccactaagatgaaagtgttac-aatgagttacaagaaattaatttataagcttacaaaagaacaagtc 37466419  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  37466420 ctaatttctacccatttt 37466437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 13 - 216
Target Start/End: Complemental strand, 1736450 - 1736245
Alignment:
Q  13 actacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatgacctactctagg 111  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| || ||  || |||||||||||||||||||||| ||| ||    
T  1736450 actacaagcataatcaaagcaataaacataagcaatgaaagaaaggaacaaacacaccaatattgttgacccagttcggtccaatatgacctaatctggg 1736351  T
Q  112 g-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacc 210  Q
    | ||||||||| |||||||||||||| |||||||||| |||||| |||||||||||||||| |||| |||||  || |||||||||||||||| ||||||    
T  1736350 ggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattaacttataagcttacacaagaacaagacctaatttctacc 1736251  T
Q  211 catttt 216  Q
    ||||||    
T  1736250 catttt 1736245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 21711154 - 21711368
Alignment:
Q  2 tgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatga 100  Q
    ||||||||||||| | | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | || ||||||||||||||||||    
T  21711154 tgtagagcaacaccataggcataatcaaagcaatagagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatga 21711253  T
Q  101 cctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacc 199  Q
    |||| |||  ||||||||||||  ||| ||||||||| |||||||||| |||||| |||||||||||||||||||||||||||  || |||| |||||||    
T  21711254 cctaatctgggggagagagcagctctcaaatccactatgatgaaagtgttacaaa-gagttacaagaaattagcttaaaagcttacacaagagcaagacc 21711352  T
Q  200 taatctctacccattt 215  Q
    |||| |||||||||||    
T  21711353 taatttctacccattt 21711368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 40592940 - 40592722
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaag-aaaggaacaaacacaccaaga-tggtaactcagttcggtccaatat 98  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || | || ||||||||||||||||    
T  40592940 gtgtagagcaacaccacaagcataatcaaagcaatatagataagcaatgaaagaaaaggaacaaacacaccaagattgttgacccagttcggtccaatat 40592841  T
Q  99 gacctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    |||||| |||  ||||||||| ||  |||||||| |||| |||||||||| |||||| ||||||||||||||||||||| |||||  || |||||||| |    
T  40592840 gacctaatctgtgggagagagaagctctccaatcgactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaaaa 40592741  T
Q  198 cctaatctctacccatttt 216  Q
     ||||| ||||||||||||    
T  40592740 tctaatttctacccatttt 40592722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 3716159 - 3715942
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||||||| || | || |||||||||||||||||    
T  3716159 gtgtagagcaacaccacaagcataatcacaacaataaagataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcggtccaatatg 3716060  T
Q  100 acctactctagg-gagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||||| ||||||||||  |||||||| |||| |||||||||| |||||| ||||||||||||||||||||| || ||  || |||||||||||    
T  3716059 acctaatctaggagagagagcagctctccaatctactatgatgaaagtgttacaaaagagttacaagaaattagcttacaaacttacacaagaacaagac 3715960  T
Q  199 ctaatctctacccatttt 216  Q
     |||| ||||||||||||    
T  3715959 ttaatttctacccatttt 3715942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 48438144 - 48438361
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||| ||||| |||||| |||||| ||||||||||||||||||||||||  |  ||  ||||||||||||||||    
T  48438144 gtgtagagcaacaccacaagcataatcaaaacaataaagataaacaatgacagaaaggaacaaacacaccaagattattgacctagttcggtccaatatg 48438243  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| ||||||||| |||||||||||||| |||||||||| |||||| |||||||||||||||||| || |||||  || |||||||||||    
T  48438244 acctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcatataagcttacacaagaacaagac 48438343  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  48438344 ctaatttctacccatttt 48438361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 24695317 - 24695104
Alignment:
Q  4 tagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatgacc 102  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||| ||  ||  |||||||||||||||||||    
T  24695317 tagagcaacac-acaagcataatcaaagcaataaagataaacaatgaaagaaatgaacaaacacaccaagattgttgacctagttcggtccaatatgacc 24695219  T
Q  103 tactcta-gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagaccta 201  Q
    || |||| |||||||||||  |||| ||||| ||| |||||||||| |||||| ||||||||||||||||||||| || ||  |||||||||||||||||    
T  24695218 taatctacgggagagagcaaccctctaatccgctatgatgaaagtgttacaaaagagttacaagaaattagcttataaacttacaaaagaacaagaccta 24695119  T
Q  202 atctctacccatttt 216  Q
    || ||||||||||||    
T  24695118 atttctacccatttt 24695104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 1417647 - 1417431
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||| ||||  ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| || | || |||||||||||||||||    
T  1417647 gtgtagagtaacatcacaagcataatcaaagcaataaagataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcggtccaatatg 1417548  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||  |||||||||||  ||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||| || ||  |||||||||||| |    
T  1417547 acctaatctgggggagagagcatccctccaatccactaagaagaaagtgttac-aatgagttataagaaattagcttataaacttacaaaagaacaagtc 1417449  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  1417448 ctaatttctacccatttt 1417431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 26298918 - 26299135
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||| || | || ||||||||| |||||||    
T  26298918 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaacgaaagagaggaacaaacacaccaagattgttgacccagttcggttcaatatg 26299017  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    || || |||  |||||||||||| ||||||||| |||| |||||||||| |||||| ||||||||||||||||||||| || ||   | |||||||||||    
T  26299018 acataatctgggggagagagcagccctccaatctactatgatgaaagtgttacaaaagagttacaagaaattagcttataaacttagacaagaacaagac 26299117  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  26299118 ctaatttctacccatttt 26299135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 8370644 - 8370428
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||||||||||||||||  | ||||||||||||||||||||||||||||||||||| |   || | || |||||||||||||||    
T  8370644 gtgtagagcaacaccacaagcataatcaaagcacaa-agataagcaatgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaata 8370546  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||  || |||||||||    
T  8370545 tgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattagcttaaaagcttacacaagaacaag 8370447  T
Q  197 acctaatctctacccattt 215  Q
    || |||| |||||||||||    
T  8370446 acataatttctacccattt 8370428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 25795710 - 25795928
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaa-gatggta-actcagttcggtccaatat 98  Q
    |||||||||||||| ||||||||||| ||| ||||| | ||||||||||||||||| ||||||||||||||| ||| ||  ||  |||||||||||||||    
T  25795710 gtgtagagcaacaccacaagcataataaaaacaataaaaataagcaatgaaagaaatgaacaaacacaccaaagattgttgacctagttcggtccaatat 25795809  T
Q  99 gacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    |||||| ||| ||| |||||||||  |||||||| ||||||||||||||| ||| || ||||||||||||||||||||| |||||  |||||||||||||    
T  25795810 gacctaatctgggggagagagcagctctccaatctactaagatgaaagtgttacgaaagagttacaagaaattagcttataagcttacaaaagaacaaga 25795909  T
Q  198 cctaatctctacccatttt 216  Q
    |||||| ||||||||||||    
T  25795910 cctaatttctacccatttt 25795928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 4 - 213
Target Start/End: Complemental strand, 30709945 - 30709733
Alignment:
Q  4 tagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaatatga 100  Q
    ||||||||||| | ||||||||||||||||  | ||||||||||||||||||||||||||||||||||| |   || | || ||||||||||||||||||    
T  30709945 tagagcaacaccataagcataatcaaagcacaa-agataagcaatgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaatatga 30709847  T
Q  101 cctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacc 199  Q
    |||| ||| ||| ||||||||| |||||||||||||| ||||||| || |||||| ||||||||||||||||||||| |||||  || |||| |||||||    
T  30709846 cctaatctgggggagagagcagccctccaatccactatgatgaaattgttacaaaagagttacaagaaattagcttataagcttacacaagagcaagacc 30709747  T
Q  200 taatctctacccat 213  Q
    |||| |||||||||    
T  30709746 taatttctacccat 30709733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 25929599 - 25929435
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaa--caaacacaccaagatggtaactcagttcggtccaatat 98  Q
    |||||||||||||| |||| |||||||||||||| | ||||||| || | ||||||| ||  ||||||||||||||||||||| |||||||||||||||     
T  25929599 gtgtagagcaacaccacaaacataatcaaagcaacaaagataagaaa-gcaagaaagaaaaacaaacacaccaagatggtaacccagttcggtccaatac 25929501  T
Q  99 gacctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaa 164  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25929500 gacctactctggggggagagcagccctccaatccactaagatgaaagtgatacaaatgagttacaa 25929435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 6794855 - 6794654
Alignment:
Q  16 acaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatgacctactct-aggga 113  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | || | ||| |||||||||||||||| | |  ||||    
T  6794855 acaagcataatcaaagcaatagagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccggttaggtccaatatgacctaatatggggga 6794756  T
Q  114 gagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaagacctaatctctaccca 212  Q
    ||||||||  ||||||||||||| |||||||||| |||||| |||||||||| ||||||||||  |||||  || ||||||||| |||||| ||||||||    
T  6794755 gagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaattagcttgcaagcttacacaagaacaagtcctaatttctaccca 6794657  T
Q  213 ttt 215  Q
    |||    
T  6794656 ttt 6794654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 216
Target Start/End: Complemental strand, 4387084 - 4386868
Alignment:
Q  2 tgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaa-gatggta-actcagttcggtccaatatg 99  Q
    |||||| |||| | ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||| ||  || |||||  || || ||||    
T  4387084 tgtagaacaacgccacatgcataatcaaaacaataaagataagcaatgaaagaaaggaacaaacacatcaaagattgtttacccagtttagttcagtatg 4386985  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||||||| ||| |||||||||  |||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||| | ||||||||| ||    
T  4386984 acctactctgggggagagagcagctctccaatccaataagataaaagtgatacaaatgggttacaagaaattagcttaaaagctcac-aaagaacaaaac 4386886  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||| ||||||    
T  4386885 ctaatttctactcatttt 4386868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 38 - 216
Target Start/End: Original strand, 36029060 - 36029240
Alignment:
Q  38 agataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccact 135  Q
    ||||||||||||||||||||||||||||||||| |||| ||  || |||||| ||||||||||||||| ||| ||| ||| |||||  ||||||||||||    
T  36029060 agataagcaatgaaagaaaggaacaaacacaccgagattgttgacccagttctgtccaatatgacctaatctgggggagaaagcagctctccaatccact 36029159  T
Q  136 aagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    | |||||||||| |||||| ||||||||||||||||||||| || ||  || |||||||||||||||| ||||||||||||    
T  36029160 atgatgaaagtgttacaaaagagttacaagaaattagcttacaaacttacacaagaacaagacctaatttctacccatttt 36029240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 16264279 - 16264495
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||| |||||||||||||  | |||||| ||||||||||||||||||||||||| || |   || | ||  ||||||||||||||    
T  16264279 gtgtagagcaacaccacaaacataatcaaagcacaa-agataaacaatgaaagaaaggaacaaacacacaaaaagattgttgacctagttcggtccaata 16264377  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||| ||||||  |||||  || |||||||||    
T  16264378 tgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgcaagcttccacaagaacaag 16264476  T
Q  197 acctaatctctacccattt 215  Q
    ||||||| ||||| |||||    
T  16264477 acctaatttctacacattt 16264495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27975109 - 27974893
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||||||||  |||| || | |||||||||||||||||| |||||||||||||||| |   || | || |||||||||||||||    
T  27975109 gtgtagagcaacaccacaagcataaataaag-aacaaagataagcaatgaaagaa-ggaacaaacacaccaaaagattgttgacccagttcggtccaata 27975012  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaa 195  Q
    ||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| |||||||||| ||| ||||||  |||||  || ||||||||    
T  27975011 tgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaaatagcttgcaagcttacacaagaacaa 27974913  T
Q  196 gacctaatctctacccattt 215  Q
    |||||||| |||||||||||    
T  27974912 gacctaatttctacccattt 27974893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 35925412 - 35925625
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||||||||||||| ||  | |||| |||||||||||||| ||||||||||||||| |   || | ||  ||||||||||||||    
T  35925412 gtgtagagcaacaccacaagcataatcaaaacacaa-agatgagcaatgaaagaaaagaacaaacacaccaaaagattgttgacctagttcggtccaata 35925510  T
Q  98 tgacctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    ||||||| | | ||||| | ||||| ||||||||||||| |||||||||| |||||| ||||||||||||||||| ||| |||||  ||  ||||||| |    
T  35925511 tgacctaattt-gggaggg-gcagttctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattagtttataagcttacactagaacaaaa 35925607  T
Q  198 cctaatctctacccattt 215  Q
    |||||| |||||||||||    
T  35925608 cctaatttctacccattt 35925625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 47924006 - 47923845
Alignment:
Q  58 gaacaaacacaccaagatggta-actcagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaat 155  Q
    |||||||||||||||||| ||  || ||||||| |||||||||||||| ||||||| ||||||||| ||| ||||| |||| |||||||||| ||||||     
T  47924006 gaacaaacacaccaagattgttgacccagttcgatccaatatgacctaatctaggggagagagcagcccttcaatctactatgatgaaagtgctacaaaa 47923907  T
Q  156 gagttacaagaaattagcttaaaagctctca-aaagaacaagacctaatctctacccatttt 216  Q
    ||||||||||||||||||||||||| |  || ||||| ||| ||||||| | ||||||||||    
T  47923906 gagttacaagaaattagcttaaaagtttacacaaagagcaaaacctaatttatacccatttt 47923845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 214
Target Start/End: Complemental strand, 3323756 - 3323633
Alignment:
Q  91 tccaatatgacctactctagg-gagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaa 189  Q
    |||||||||||||| ||| || |||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||  |||||    
T  3323756 tccaatatgacctaatctgggagagagaacagccctccaatccactaagatgaaagtgttacaa-tgagttacaagaaattagcttataagcttacaaaa 3323658  T
Q  190 gaacaagacctaatctctacccatt 214  Q
    ||||||| | |||| ||||||||||    
T  3323657 gaacaagtcataatttctacccatt 3323633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 27986603 - 27986449
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||  |||||||||| |||||||||| ||||||| | |||||||||||||| |   || | || |||||||||||||||    
T  27986603 gtgtagagcaacaccacaagcatatacaaagcaataaagataagcaa-gaaagaatg-aacaaacacaccaaaagattgttgacccagttcggtccaata 27986506  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaa 153  Q
    ||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||    
T  27986505 tgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 27986449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 33386824 - 33386669
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||| |||| |||| ||||| |||||||||||||||||| | |||||||||||||| |   || | |  |||||||||||||||    
T  33386824 gtgtagagcaacaccacaagtataaccaaaacaataaagataagcaatgaaagaa-gaaacaaacacaccaaaagattgttgatccagttcggtccaata 33386726  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaa 153  Q
    ||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||    
T  33386725 tgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 33386669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 39040150 - 39039995
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||| |||||||  | ||||||||||||||||||||||||||||||||||| |   || | ||  ||||||||||||||    
T  39040150 gtgtagagcaacaccacaagcataaacaaagcacaa-agataagcaatgaaagaaaggaacaaacacaccaaaagattgttgacctagttcggtccaata 39040052  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaa 153  Q
    ||||||| ||| ||| ||||| ||   ||||||||||||| |||||||||| |||||    
T  39040051 tgacctaatctggggaagagaacaactctccaatccactatgatgaaagtgttacaa 39039995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 8126684 - 8126777
Alignment:
Q  123 cctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  ||||||||||| || |||| ||||||||||||    
T  8126684 cctccaatccactacgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaatacttaatttctacccatttt 8126777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 21353604 - 21353708
Alignment:
Q  111 ggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacc 210  Q
    ||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||| | ||||||||  ||||||| ||||||    
T  21353604 ggagagagcacctctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcacaagagctcac-aaagaacacaacctaatttctacc 21353702  T
Q  211 catttt 216  Q
    ||||||    
T  21353703 catttt 21353708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 32143251 - 32143467
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||||| |  |||||||||| |||||||||| ||||| ||| |||||||||||||| |   || | ||  ||||||||||||||    
T  32143251 gtgtagagcaacaccacaagcaaatacaaagcaataaagataagcaa-gaaaggaag-aacaaacacaccaaaagattgttgacctagttcggtccaata 32143348  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaa 195  Q
    ||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||  || ||||||||    
T  32143349 tgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaaaatagcttgcaagcttacacaagaacaa 32143447  T
Q  196 gacctaatctctacccattt 215  Q
    ||||||   |||||||||||    
T  32143448 gacctagattctacccattt 32143467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 34491449 - 34491346
Alignment:
Q  7 agcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaa-gatggta-actcagttcggtccaatatgaccta 104  Q
    ||||| || |||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| ||  || |||||||||||||  |||||||    
T  34491449 agcaaaaccacaatcataatcaaagcaataaagataagcaatgaaagaaatgaacaaacacaccaaagattgttcacccagttcggtccaacttgaccta 34491350  T
Q  105 ctct 108  Q
    ||||    
T  34491349 ctct 34491346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 26928757 - 26928541
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||||| |  |||||||||| |||||||| | ||||||||| |||||||||||||| |   || | || |||||| | ||||||    
T  26928757 gtgtagagcaacaccacaagcaaatacaaagcaataaagataagcta-gaaagaaag-aacaaacacaccaaaagattgttgacccagttcag-ccaata 26928661  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag--aaattagcttaaaagctctcaaaagaaca 194  Q
    ||||||| ||| ||| ||||||||   ||||||||||||| |||||||||| |||||| | ||||||||  ||| ||||||  |||||  || |||||||    
T  26928660 tgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaa-gggttacaagaaaaaatagcttgcaagcttacacaagaaca 26928562  T
Q  195 agacctaatctctacccattt 215  Q
    |||||||   |||||||||||    
T  26928561 agacctagattctacccattt 26928541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 168
Target Start/End: Original strand, 27452914 - 27453056
Alignment:
Q  27 caaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaatatgacctactctaggg-agagagcagt 122  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||| |   || | |  |||||||||||||||||||||| ||  ||| |||||||||     
T  27452914 caaagcaataaagataagcaa-gaaagaa-ggaacaaacacaccaaaagattgttgatccagttcggtccaatatgacctaatccgggggagagagcagc 27453011  T
Q  123 cctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 168  Q
     ||||||||||||| |||||||||| |||||| | |||||||||||    
T  27453012 tctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 27453056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 164
Target Start/End: Complemental strand, 25929405 - 25929365
Alignment:
Q  124 ctccaatccactaagatgaaagtgatacaaatgagttacaa 164  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25929405 ctccaatccactaagatgaaagtgatacaaatgagttacaa 25929365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 32744516 - 32744552
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaaa 178  Q
    |||||||||||||||||||||||||||||||||||||    
T  32744516 aaagtgatacaaatgagttacaagaaattagcttaaa 32744552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 47649656 - 47649716
Alignment:
Q  156 gagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||||||||||||||| |||| |||||  || |||||||||||||||| ||||||||||||    
T  47649656 gagttacaagaaattaacttacaagcttccacaagaacaagacctaatttctacccatttt 47649716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 8126631 - 8126682
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaa 52  Q
    |||||||||||||| |||  |||||||||||||||| |||||||||||||||    
T  8126631 gtgtagagcaacaccacactcataatcaaagcaataaagataagcaatgaaa 8126682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 760935 - 760860
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||| ||||||||||||||||||||  |||||| | ||||||| ||||||||| |||||||||||||    
T  760935 aaagggatacaaatgggttacaagaaattagcttaaacaagctcac-aaagaac-agacctaatttctacccattttc 760860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 22835082 - 22835157
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||| ||||||||||||||||||||  |||||| | ||||||||| ||||||| |||||||||||||    
T  22835082 aaagggatacaaatgggttacaagaaattagcttaaacaagctcac-aaagaacaa-acctaatttctacccattttc 22835157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 32891192 - 32891116
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||||||||||||||||||||||  | |||||| | ||||||||| || |||| |||||||||||||    
T  32891192 aaagagatacaaatgagttacaagaaattagcttcaacaagctcac-aaagaacaaaacttaatttctacccattttc 32891116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 39153441 - 39153516
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||||||||||||||||||||||||  |||||| | || |||||| ||||||| |||||||||||||    
T  39153441 aaagggatacaaatgagttacaagaaattagcttaaacaagctcac-aatgaacaa-acctaatttctacccattttc 39153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 1305879 - 1306046
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||||| |  ||||||||   |||||||||| ||||| ||| |||||||||||||| |   || | || |||||| | ||||||    
T  1305879 gtgtagagcaacaccacaagcaaatacaaagcaaccaagataagcaa-gaaaggaag-aacaaacacaccaaaagattgttgacccagttcag-ccaata 1305975  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 168  Q
    || |||| ||||||| ||| |||||  ||||||||||||| |||||||||| |||||| | |||||||||||    
T  1305976 tggcctaatctaggggagatagcagctctccaatccactacgatgaaagtgttacaaa-gggttacaagaaa 1306046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 29100172 - 29100299
Alignment:
Q  83 cagttcggtccaatatgacctactctaggga-gagagcagtcctccaatccactaagatgaa-agtgatacaaatgagttacaagaaattagcttaaaag 180  Q
    ||||||||||||| || ||| ||| |||||| ||||||||  ||||| ||||||| ||| || |||||||||||   |||| |||||||||||||||||     
T  29100172 cagttcggtccaaaattacccactatagggaagagagcagctctccattccactatgataaagagtgatacaaagaggttataagaaattagcttaaaaa 29100271  T
Q  181 ctctcaaaagaacaagacctaatctctac 209  Q
    ||| | |||||||||  |||||| |||||    
T  29100272 ctcac-aaagaacaaaccctaatttctac 29100299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27026875 - 27026925
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaa 52  Q
    |||||||||||||| ||||||||||||||||| | | |||||||||||||||    
T  27026875 gtgtagagcaacaccacaagcataatcaaagc-acaaagataagcaatgaaa 27026925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27038220 - 27038270
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaa 52  Q
    |||||||||||||| ||||||||||||||||| | | |||||||||||||||    
T  27038220 gtgtagagcaacaccacaagcataatcaaagc-acaaagataagcaatgaaa 27038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 747007 - 746953
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||||||||| ||||||||    
T  747007 cagttcggtccaatctgacctagtctgggggagagagcagtcctccgatccacta 746953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 5366351 - 5366301
Alignment:
Q  129 atccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaa 179  Q
    |||||||| |||||||||||||||||   |||||||||||||| |||||||    
T  5366351 atccactatgatgaaagtgatacaaagaggttacaagaaattatcttaaaa 5366301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 6063453 - 6063507
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  6063453 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 6063507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 46860562 - 46860487
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||| ||||||||||||||||||  | |||||| | ||||||||| ||||||| |||||||||||||    
T  46860562 aaagagatacaaatgggttacaagaaattagcttcaacaagctcac-aaagaacaa-acctaatttctacccattttc 46860487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 50494249 - 50494195
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  50494249 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 50494195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 4570040 - 4570007
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  4570040 aaagagatacaaatgagttacaagaaattagctt 4570007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 34491295 - 34491225
Alignment:
Q  147 gatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||||||||||||||||||||||||||||  | |||||| | |||||||||  |||||| |||||||||||||    
T  34491295 gatacaaatgagttacaagaaattagcttcaacaagctcac-aaagaacaa-ccctaatttctacccattttc 34491225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 51398902 - 51398869
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  51398902 aaagagatacaaatgagttacaagaaattagctt 51398869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 175
Target Start/End: Original strand, 53921587 - 53921616
Alignment:
Q  146 tgatacaaatgagttacaagaaattagctt 175  Q
    ||||||||||||||||||||||||||||||    
T  53921587 tgatacaaatgagttacaagaaattagctt 53921616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 9581370 - 9581297
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattt 215  Q
    |||| |||||||||| |||| |||||||||||||||  |||||| | ||||||||| ||||||| |||||||||||    
T  9581370 aaagggatacaaatgggttaaaagaaattagcttaaacaagctcac-aaagaacaa-acctaatttctacccattt 9581297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 23391989 - 23392025
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaaa 178  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  23391989 aaagtgatacaaatgggttacaagaaattatcttaaa 23392025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 7e-70; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 29159733 - 29159950
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||  || |||||||||||||||||    
T  29159733 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcggtccaatatg 29159832  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||||||| |||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || |||||||||||    
T  29159833 acctaatctaggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagac 29159932  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  29159933 ctaatttctacccatttt 29159950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 46516477 - 46516260
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    ||||| |||||||| | ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||  || |||||||||||||||||    
T  46516477 gtgtaaagcaacaccaaaagcataatcaaagcaatagagataaacaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatg 46516378  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||||||| ||||||||| |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||  || |||||||||||    
T  46516377 acctaatctaggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttaaaagcttacacaagaacaagac 46516278  T
Q  199 ctaatctctacccatttt 216  Q
     |||| ||||||||||||    
T  46516277 ataatttctacccatttt 46516260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 20284019 - 20284235
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | || |||||||||||||||||    
T  20284019 gtgtagagcaacaccacaagcataatcaaagcaataaagataagaaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatg 20284118  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||  |||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||| |||||  |||||||||||| |    
T  20284119 acctaatctgggggagagagcagccctccaatccactaagatgaaagtgttac-aatgcgttacaagaaattagcttataagcttacaaaagaacaagtc 20284217  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||| ||||    
T  20284218 ctaatttctacccttttt 20284235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 33332617 - 33332400
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| | ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||  || ||||||| || ||||||    
T  33332617 gtgtagagcaacaccataagcataatcaaatcaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcgatctaatatg 33332518  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| ||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||  ||||||||||||||    
T  33332517 acctaatctgggggagagagcagccctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaagac 33332418  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||| ||||||    
T  33332417 ctaatttctactcatttt 33332400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 4 - 216
Target Start/End: Complemental strand, 2647860 - 2647646
Alignment:
Q  4 tagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatgacc 102  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||  || || ||||| |||||||||||    
T  2647860 tagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaaacacatcaagattgttgacccaattcggcccaatatgacc 2647761  T
Q  103 tactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagaccta 201  Q
    || ||| ||| ||||||||| |||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || ||||||||||||||    
T  2647760 tattctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagaccta 2647661  T
Q  202 atctctacccatttt 216  Q
    || ||||||||||||    
T  2647660 atttctacccatttt 2647646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 23403180 - 23402964
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||| || | || || ||||||| ||||||    
T  23403180 gtgtagagcaacaccacaagcataatcaaagcaataaatataagcaatgaaagaaaggaacaaacacactaagattgttgacccaattcggtctaatatg 23403081  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| |||||| |||||| ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||| |||||  |||||||||||| |    
T  23403080 acctaatctgagggagtgagcagccctccaatctactaagatgaaagtgttac-aatgagttacaagaaattagcttataagcttacaaaagaacaagtc 23402982  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  23402981 ctaatttctacccatttt 23402964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 55881 - 56094
Alignment:
Q  4 tagagcaacactacaagcataatcaaagcaatatagataagcaatgaaag-aaaggaacaaacacaccaagatggta-actcagttcggtccaatatgac 101  Q
    ||||||||||| ||||||||||||||||||  | |||||||||||| ||| ||||||||||||||||||||||  |  || |||||||||||||||||||    
T  55881 tagagcaacaccacaagcataatcaaagcacaa-agataagcaatggaaggaaaggaacaaacacaccaagattattgacccagttcggtccaatatgac 55979  T
Q  102 ctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagaccta 201  Q
    ||| ||| |||||||||||| |||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || ||||||||||||||    
T  55980 ctaatctggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagaccta 56079  T
Q  202 atctctacccatttt 216  Q
    || ||||||||||||    
T  56080 atttctacccatttt 56094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 4796834 - 4796617
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| || |||| ||||||||||||| |||    
T  4796834 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgagagaaaggaacaaacacaccaagattgttaacccagttcggtccaaaatg 4796735  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||  |||||| ||||| |||| ||||||||| ||||||| || |||||| ||||||||||||||||||||| |||||  || |||||||||||    
T  4796734 acctaatctgggggagaaagcagccctcaaatccactatgatgaaattgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagac 4796635  T
Q  199 ctaatctctacccatttt 216  Q
    || || | ||||||||||    
T  4796634 ctcatttatacccatttt 4796617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 5817437 - 5817221
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaa-gatggt-aactcagttcggtccaatat 98  Q
    ||||||| |||||| ||||||||||||||  |||||  ||||||||||| |||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  5817437 gtgtagaacaacaccacaagcataatcaacacaataatgataagcaatgtaagaaaggaacaaacacaccaaagattgttaactcagttcggtccaatat 5817338  T
Q  99 gacctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    |||||||||| ||||||||||||  |||||||||||||| |||||||||||||||| | ||||||||||||| || ||| ||||| | ||||||||| ||    
T  5817337 gacctactctggggagagagcagctctccaatccactaatatgaaagtgatacaaaggggttacaagaaatttgcataagagctcac-aaagaacaaaac 5817239  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| |||| |||||||    
T  5817238 ctaatttctatccatttt 5817221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 9190175 - 9189958
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| || | || |||||||||||||||||    
T  9190175 gtgtagagcaacaccacaagcataaacaaagcaataaagataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcggtccaatatg 9190076  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaaga 197  Q
    ||||| |||  ||||||||||||  |||||||||||||||||||||||| ||| ||||||||||||| ||| ||||||  |||||  || |||||||||     
T  9190075 acctagtctgggggagagagcagctctccaatccactaagatgaaagtgttac-aatgagttacaagaaaaatagcttgcaagcttacacaagaacaagt 9189977  T
Q  198 cctaatctctacccatttt 216  Q
    |||||| ||||||||||||    
T  9189976 cctaatttctacccatttt 9189958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 49091592 - 49091806
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||||| ||||||||| ||  || |||||  ||||||||||    
T  49091592 gtgtagagcaacaccacaagcataatcaaagcacaa-agataagcaatgaaagaaaggaacaaacgcaccaagattgttgacccagtttagtccaatatg 49091690  T
Q  100 acctactctaggga-gagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| |||| |||||||   ||||||||||||| |||||||||| |||||| |||||||||||||||| |||| |||||  || |||||||||||    
T  49091691 acctaatctggggaagagagcaactctccaatccactatgatgaaagtgttacaaaagagttacaagaaattaccttataagcttacacaagaacaagac 49091790  T
Q  199 ctaatctctacccatt 214  Q
    ||||| ||||||||||    
T  49091791 ctaatttctacccatt 49091806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 35960746 - 35960966
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||| ||||| || |||||||  ||||||||| ||||||| ||| || |||| |||||||||||||||||| ||  ||  |||||||| |||||||    
T  35960746 gtgtagagaaacaccaccagcataaataaagcaataaagataagaaattaatgaaatgaacaaacacaccaagattgttgaccgagttcggttcaatatg 35960845  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| ||||||||| ||||||| |||||| |||||||||| ||||||||||||| |||||||||||||| |||||  ||||||||||| ||    
T  35960846 acctaatctgggggagagagcagccctccaaaccactatgatgaaagtgttacaaatgagttagaagaaattagcttataagcttacaaaagaacaatac 35960945  T
Q  199 ctaatctctacccattttcat 219  Q
    ||||| |||||||||||||||    
T  35960946 ctaatttctacccattttcat 35960966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 216
Target Start/End: Complemental strand, 28617386 - 28617176
Alignment:
Q  7 agcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaa-caaacacaccaagatggta-actcagttcggtccaatatgaccta 104  Q
    |||||||| ||||||||| ||||||||| | |||||||||| ||||| ||| || |||||||||||| || ||  || ||||||||||||||||||||||    
T  28617386 agcaacaccacaagcatattcaaagcaacaaagataagcaa-gaaaggaagaaaacaaacacaccaatattgtttacccagttcggtccaatatgaccta 28617288  T
Q  105 ctctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaat 203  Q
    |||| ||| |||||||||  ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| | ||||||||| |||||||    
T  28617287 ctctgggggagagagcagctctccaatccactaagatgaaagtgatacaatggggttacaagaaattagcttaaaagctcac-aaagaacaaaacctaat 28617189  T
Q  204 ctctacccatttt 216  Q
     |||||| |||||    
T  28617188 ttctacctatttt 28617176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 3047186 - 3047401
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaa-caaacacaccaagatggtaactcagttcggtccaatatg 99  Q
    ||||| |||||||| ||||||||||||||| ||| | ||||||  || | ||||||| || ||||||||||||||| ||||| |||||||||||||||||    
T  3047186 gtgtaaagcaacaccacaagcataatcaaatcaaca-agataataaa-gcaagaaagaaaacaaacacaccaagatcgtaacccagttcggtccaatatg 3047283  T
Q  100 acctactctaggg--agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    |||| |||| |||  ||||||| ||  ||||||||||||| ||||||||| ||||||||||||||||||||| | ||||||||||| | |||||||||||    
T  3047284 acctgctctggggggagagagccgttatccaatccactaatatgaaagtggtacaaatgagttacaagaaatcaacttaaaagctcac-aaagaacaaga 3047382  T
Q  198 cctaatctctacccatttt 216  Q
    |||||| ||||||||||||    
T  3047383 cctaatttctacccatttt 3047401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 21983213 - 21983432
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaag-aaaggaacaaacacaccaaga-tggtaactcagttcggtccaatat 98  Q
    |||||||||||||| |||| |||||||||||||||| |||||||||| ||||| |||||||||||  |||| ||| || | || ||||||||||||||||    
T  21983213 gtgtagagcaacaccacaaacataatcaaagcaatagagataagcaacgaaagaaaaggaacaaatgcaccgagattgttgacccagttcggtccaatat 21983312  T
Q  99 gacctactct-agggagagagcagtcctccaatccactaagatgaaagtgatac-aaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    |||||| |||  ||||||||||||  ||||||||||||| |||||||||| ||| ||| ||||||||||||| ||||||  |||||  || |||||||||    
T  21983313 gacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaaagagttacaagaaaatagcttgcaagcttacacaagaacaag 21983412  T
Q  197 acctaatctctacccatttt 216  Q
    ||||| | ||||||||||||    
T  21983413 acctagtttctacccatttt 21983432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 2580317 - 2580536
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaa---aggaacaaacacaccaagatggta-actcagttcggtccaat 96  Q
    ||||||||  |||| ||||| |||| |||||||||| ||||||||||||||| ||   |||||||||||||||||||| ||  || || |||||||||||    
T  2580317 gtgtagagatacaccacaagtataaccaaagcaataaagataagcaatgaaaaaagagaggaacaaacacaccaagattgttgacccaattcggtccaat 2580416  T
Q  97 atgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaa 195  Q
    |||||||| ||| ||| |||||||||  |||||||||||||||||||||||| ||| |||||||||||||||| ||||||  |||||  || ||||||||    
T  2580417 atgacctagtctgggggagagagcagctctccaatccactaagatgaaagtgttac-aatgagttacaagaaaatagcttgcaagcttacacaagaacaa 2580515  T
Q  196 gacctaatctctacccatttt 216  Q
    | |||| | ||||||||||||    
T  2580516 gtcctagtttctacccatttt 2580536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 2479267 - 2479479
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||  ||||| || | |||||||||||||||||| | |||||||||||||| |   || | || ||||||||| |||||    
T  2479267 gtgtagagcaacaccacaagcatatacaaag-aacaaagataagcaatgaaagaa-gaaacaaacacaccaaaagattgttgacccagttcggttcaata 2479364  T
Q  98 tgacctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    ||||||| ||||||| ||||||||  ||| ||||||||| |||||||||| |||||| |||||| |||||| ||||||  |||||  || ||||||||||    
T  2479365 tgacctaatctagggggagagcagctctcaaatccactatgatgaaagtgttacaaa-gagttataagaaaatagcttgcaagcttacacaagaacaaga 2479463  T
Q  198 cctaatctctacccat 213  Q
    |||||| |||||||||    
T  2479464 cctaatttctacccat 2479479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 21988837 - 21989006
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaag-aaaggaacaaacacaccaaga-tggtaactcagttcggtccaatat 98  Q
    |||||||||||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||| ||| || | || ||||||||||||||||    
T  21988837 gtgtagagcaacaccacaaacataatcaaagcaataaagataagcaatgaaagaaaaggaacaaacacaccgagattgttgacccagttcggtccaatat 21988936  T
Q  99 gacctactctagggagagagcagtcctccaatccactaagatgaaagtgatac-aaatgagttacaagaaa 168  Q
    |||||| ||| ||  |||||||   ||||||||||||  |||||||||| ||| ||| |||||||||||||    
T  21988937 gacctaatct-ggaggagagcaactctccaatccactttgatgaaagtgttacaaaaagagttacaagaaa 21989006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 9185330 - 9185178
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||| ||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||  ||||||||| || | || ||||||||||||||||     
T  9185330 gtgtagagaaacaccacaagcataaacaaagcaataaagataagcaatgaaagagaggaacaa--acaccaagattgttgacccagttcggtccaatata 9185233  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaa 153  Q
    ||||| |||  ||||||||| ||  |||||||||||||||||||||||| |||||    
T  9185232 acctagtctgggggagagagaagctctccaatccactaagatgaaagtgttacaa 9185178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 44848851 - 44848636
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||  ||||| || | |||||||||||||||||| |||||| ||||||||| |   || | || ||||||||| |||||    
T  44848851 gtgtagagcaacaccacaagcatatacaaag-aacaaagataagcaatgaaagaa-ggaacatacacaccaaaagattgttgacccagttcggttcaata 44848754  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    |||||||  || ||| |||||||||  ||||||||||||| |||||||||| |||||| |||||||||||||  |||||  |||||  || ||||| |||    
T  44848753 tgacctaacctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaaaagcttgcaagcttacacaagaataag 44848655  T
Q  197 acctaatctctacccattt 215  Q
    ||||||| |||||||||||    
T  44848654 acctaatttctacccattt 44848636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 9235721 - 9235648
Alignment:
Q  2 tgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagat 75  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  9235721 tgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaatgaacaaacacaccaagat 9235648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 22270201 - 22270107
Alignment:
Q  16 acaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacacca--agatggtaactcagttcggtccaatatgacctactct 108  Q
    |||| |||||||||||||||| |||||| |||||||||||||||||||||||||||  ||||| | || |||||||||||||  |||||||||||    
T  22270201 acaatcataatcaaagcaataaagataaacaatgaaagaaaggaacaaacacaccaagagatgttcacccagttcggtccaacttgacctactct 22270107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 47263608 - 47263754
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||| ||||| |||| |||||||||||||||  ||| |||||||||||||| |   || | || |||||||||||||||    
T  47263608 gtgtagagcaacaccacaagcataaacaaag-aataaagataagcaatgaaa-taagaaacaaacacaccaaaagattgttgacccagttcggtccaata 47263705  T
Q  98 tgacctactctagggagagagcagtcctccaatccactaagatgaaagtg 147  Q
    ||||||| | | ||| ||||||||  ||||||||||||| ||||||||||    
T  47263706 tgacctaatat-gggggagagcagctctccaatccactatgatgaaagtg 47263754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 18413571 - 18413785
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||||| |  ||||||||   |||||||||| ||||||||| |||||||||||||| |   || | || |||||| | ||||||    
T  18413571 gtgtagagcaacaccacaagcaaatacaaagcaaccaagataagcaa-gaaagaaag-aacaaacacaccaaaagattgttgacccagttcag-ccaata 18413667  T
Q  98 tgacctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaat-tagcttaaaagctctcaaaagaacaag 196  Q
    || |||| ||| ||||||||||||  ||||||||||||| |||||||||| |||||| | |||||||||||  ||| ||  |||||  || |||||||||    
T  18413668 tggcctaatctggggagagagcagctctccaatccactatgatgaaagtgttacaaagg-gttacaagaaaaatagattgcaagcttacacaagaacaag 18413766  T
Q  197 acctaatctctacccattt 215  Q
     |||| | |||||||||||    
T  18413767 tcctagtttctacccattt 18413785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 9235596 - 9235533
Alignment:
Q  153 aatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||||||||||||||||||||||| |||||  |||||||||||| |||||| ||||||||||||    
T  9235596 aatgagttacaagaaattagcttataagcttacaaaagaacaagtcctaatttctacccatttt 9235533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 215
Target Start/End: Original strand, 21646028 - 21646152
Alignment:
Q  92 ccaatatgacctactctaggga-gagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaa 189  Q
    |||||||| |||| |||||||| ||||||||  ||||||||||||| |||||||||| || ||| | |||||||| ||| ||||||  |||||  || ||    
T  21646028 ccaatatggcctaatctagggaagagagcagctctccaatccactatgatgaaagtgtta-aaaagggttacaagaaaaatagcttgcaagcttacacaa 21646126  T
Q  190 gaacaagacctaatctctacccattt 215  Q
    ||||||||||||   |||||||||||    
T  21646127 gaacaagacctagattctacccattt 21646152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 24525985 - 24526052
Alignment:
Q  151 caaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||||||||||||||||||||||||  | |||||| | ||||||||| ||||||| |||||||||||||    
T  24525985 caaatgagttacaagaaattagctttgacaagctcac-aaagaacaaaacctaatttctacccattttc 24526052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 30814637 - 30814574
Alignment:
Q  42 aagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatgaccta 104  Q
    ||||||||||||||||||||||||||||||| | || | || |||||||||||||  |||||||    
T  30814637 aagcaatgaaagaaaggaacaaacacaccaaaattgttgacccagttcggtccaacttgaccta 30814574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 2361052 - 2361127
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||||||||||||||||||||||  | |||||| | |||||||||  |||||| |||||||||||||    
T  2361052 aaagagatacaaatgagttacaagaaattagcttcaacaagctcac-aaagaacaa-ccctaatttctacccattttc 2361127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 21639849 - 21639954
Alignment:
Q  110 gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaagacctaatctcta 208  Q
    ||||||||||||  |||||||||||||  ||||||||| |||||| | |||||||| ||| ||||||  |||||  || ||||||||||||||   ||||    
T  21639849 gggagagagcagctctccaatccactataatgaaagtgttacaaa-gggttacaagaaaaatagcttgcaagcttacacaagaacaagacctagattcta 21639947  T
Q  209 cccattt 215  Q
    |||||||    
T  21639948 cccattt 21639954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 29608825 - 29608750
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||||||||||||||||||||||  | |||||| | |||||||||  |||||| |||||||||||||    
T  29608825 aaagagatacaaatgagttacaagaaattagcttcaacaagctcac-aaagaacaa-ccctaatttctacccattttc 29608750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 31155920 - 31155974
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  31155920 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 31155974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 38671302 - 38671377
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    ||||||||||||||| ||||||| ||||||||||||  |||||| | |||||||||  |||||| |||||||||||||    
T  38671302 aaagtgatacaaatgtgttacaataaattagcttaaacaagctcac-aaagaacaa-ccctaatttctacccattttc 38671377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 48599414 - 48599489
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||||||||||||||||||||||  | |||||| | |||||||||  |||||| |||||||||||||    
T  48599414 aaagagatacaaatgagttacaagaaattagcttcaacaagctcac-aaagaacaa-ccctaatttctacccattttc 48599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 8153430 - 8153397
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  8153430 aaagagatacaaatgagttacaagaaattagctt 8153397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 23565141 - 23565216
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||| |||||||| ||||||||||||||||| ||  | |||||| | ||||||||||||||||| |||||| |||||    
T  23565141 aaagagatacaaaagagttacaagaaattagtttcaacaagctcac-aaagaacaagacctaatttctacctatttt 23565216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 3259083 - 3259047
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaaa 178  Q
    |||| |||||||||||||||||| |||||||||||||    
T  3259083 aaagagatacaaatgagttacaataaattagcttaaa 3259047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 4538627 - 4538694
Alignment:
Q  149 tacaaatgagttacaagaaattagcttaaaagctctca-aaagaacaagacctaatctctacccatttt 216  Q
    |||||||| ||||||||||||||||||||||  | ||| |||||||||  |||||| ||||||||||||    
T  4538627 tacaaatgggttacaagaaattagcttaaaaaatttcataaagaacaa-ccctaatttctacccatttt 4538694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Complemental strand, 25615937 - 25615905
Alignment:
Q  146 tgatacaaatgagttacaagaaattagcttaaa 178  Q
    ||||||||||| |||||||||||||||||||||    
T  25615937 tgatacaaatgggttacaagaaattagcttaaa 25615905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 7e-70; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 10077332 - 10077115
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  || || ||||||||||||||    
T  10077332 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccaattcggtccaatatg 10077233  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| ||||||||| |||||||||||||| |||||||||| ||||||  |||||||||||||||||||| |||||  ||||||||||||||    
T  10077232 acctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaaaagttacaagaaattagcttataagcttacaaaagaacaagac 10077133  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  10077132 ctaatttctacccatttt 10077115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 4629883 - 4630101
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacaca-ccaaga-tggtaactcagttcggtccaatat 98  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||| || | ||||||||| |||||||||    
T  4629883 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaaacacatcaaagattgttgactcagttcagtccaatat 4629982  T
Q  99 gacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    |||||| ||||||| |||||||||  |||||||||||||||||||||||| ||||||  ||||||||||||||| |||| |||||  |||||||||||||    
T  4629983 gacctaatctagggaagagagcagctctccaatccactaagatgaaagtgttacaaaatagttacaagaaattaacttataagcttacaaaagaacaaga 4630082  T
Q  198 cctaatctctacccatttt 216  Q
    |||||| |||||| |||||    
T  4630083 cctaatttctacctatttt 4630101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 31979443 - 31979660
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||  ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||| ||  || |||||||||||||||||    
T  31979443 gtgtagagcaacatcacaagcataatcaaagcaataaagataagcaatgaaatagaggaacaaacacaccaagattgttgacccagttcggtccaatatg 31979542  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    || || ||| ||| ||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||||| |||| |||||  ||||||||||||||    
T  31979543 acataatctgggggagagagcagccctccaatccactaagatgaaagtgttgcaaaagagttacaagaaattaacttataagcttacaaaagaacaagac 31979642  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  31979643 ctaatttctacccatttt 31979660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 18232775 - 18232992
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||| || | |||||  |||||||||||||    
T  18232775 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcgatgaaagagaggaacaaacacaccaagattgttgactcaaatcggtccaatatg 18232874  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||  |||||||||||  |||||||| ||||| |||||||||| |||||| |||||||||||||| |||||| |||||  || |||||||||||    
T  18232875 acctaatctgggggagagagcaaccctccaattcactatgatgaaagtgttacaaaagagttacaagaaatcagcttataagcttacacaagaacaagac 18232974  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  18232975 ctaatttctacccatttt 18232992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 22963630 - 22963806
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || | || ||||||||| |||||||    
T  22963630 gtgtagagcaacaccacaagcataatcaaagcaatagagataagctatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtgcaatatg 22963729  T
Q  100 acctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagctta 176  Q
    ||| | ||| |||||||||||| |||||||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  22963730 accaaatctggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagctta 22963806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 23824763 - 23824587
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || | || ||||||||| |||||||    
T  23824763 gtgtagagcaacaccacaagcataatcaaagcaatagagataagctatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtgcaatatg 23824664  T
Q  100 acctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagctta 176  Q
    ||| | ||| |||||||||||| |||||||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  23824663 accaaatctggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagctta 23824587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 11 - 216
Target Start/End: Complemental strand, 24436127 - 24435921
Alignment:
Q  11 acactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaa-caaacacaccaagatggtaactcagttcggtccaatatgacctactcta 109  Q
    |||| |||||||||| |||||||| | ||||||| || | ||||||| || ||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  24436127 acacaacaagcataaacaaagcaacaaagataagaaa-gcaagaaagaaaacaaacacaccaagatggtaacccagttcgatccaatatgacctactcta 24436029  T
Q  110 ggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctcta 208  Q
    ||| ||||||||| ||||| |||||||| ||||||| || ||||||||| |||||||||||||||||| |||||  ||||| ||||||||||||| ||||    
T  24436028 ggggagagagcagccctccgatccactaggatgaaaatgttacaaatgaattacaagaaattagcttataagcttacaaaaaaacaagacctaatttcta 24435929  T
Q  209 cccatttt 216  Q
    ||||||||    
T  24435928 cccatttt 24435921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 27 - 216
Target Start/End: Complemental strand, 5572382 - 5572191
Alignment:
Q  27 caaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatgacctactctaggg-agagagcagtcc 124  Q
    |||||||||| | ||||||| ||||||||| |||||||||||||||||| ||  || || ||||||||||||||||||| ||||||| ||||||||| ||    
T  5572382 caaagcaataaatataagcagtgaaagaaatgaacaaacacaccaagattgttgacccaattcggtccaatatgacctaatctaggggagagagcagccc 5572283  T
Q  125 tccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || |||||||||||||||| ||||| ||||||    
T  5572282 tccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacgcatttt 5572191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 38 - 216
Target Start/End: Complemental strand, 31086603 - 31086423
Alignment:
Q  38 agataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccact 135  Q
    |||||||||||||||||||||||||||||||||||||| ||  || |||||| ||||||||||| ||| ||||||| ||||||||   ||||||||||||    
T  31086603 agataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcagtccaatatgatctaatctaggggagagagcaactctccaatccact 31086504  T
Q  136 aagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    | |||||||||| |||||| ||||||||||||||||||||| |||||  || |||| ||||||||||| ||||||||||||    
T  31086503 atgatgaaagtgttacaaaggagttacaagaaattagcttataagcttacacaagagcaagacctaatttctacccatttt 31086423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 5017635 - 5017430
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||| || | || |||||||||| ||||||    
T  5017635 gtgtagagcaacaccacaagcataatcaaagcacaa-agataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtcaaatatg 5017537  T
Q  100 acctactcta-gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||| |||||||||||  ||||||||| |||| |||||||||           ||||||||||||||||||| |||||  || |||||||||||    
T  5017536 acctaatctaggggagagagcaaccctccaatctactatgatgaaagt-----------gttacaagaaattagcttataagcttacacaagaacaagac 5017448  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  5017447 ctaatttctacccatttt 5017430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 5757645 - 5757430
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||| ||||| || | |||||||||||||||||| |||||||||||||||| |   || | || |||||||||||||||    
T  5757645 gtgtagagcaacaccacaagcataaacaaag-aacaaagataagcaatgaaagaa-ggaacaaacacaccaaaagattgttgacccagttcggtccaata 5757548  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||| ||||||  |||||   | |||||||||    
T  5757547 tgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgcaagcttatacaagaacaag 5757449  T
Q  197 acctaatctctacccattt 215  Q
    ||||||| |||||||||||    
T  5757448 acctaatttctacccattt 5757430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 21801516 - 21801294
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaa-gat------ggtaactcagttcggtcc 93  Q
    ||||||| ||| || |||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||      | | || |||||| ||||    
T  21801516 gtgtagaacaataccacaatcataatcaaagcaataaagataagtaatgaaagaaaggaacaaacacaccaaagataaaagtgttgac-cagttcagtcc 21801418  T
Q  94 aatatgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaa 192  Q
    ||||||||||| ||| ||| || ||||||  ||||||||||||||||| |||||| |||||| |||||||||||||||| |||| |||||  ||||||||    
T  21801417 aatatgacctaatctgggggagcgagcagctctccaatccactaagataaaagtgttacaaaagagttacaagaaattatcttataagcttacaaaagaa 21801318  T
Q  193 caagacctaatctctacccatttt 216  Q
    |||||| |||| ||||||||||||    
T  21801317 caagacttaatttctacccatttt 21801294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 31936517 - 31936671
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| || | ||  ||||||||||||||||    
T  31936517 gtgtagagcaacaccacaagcataaacaaagcaataaagataagcaatgaaagataggaacaaacacaccaagattgttgacctagttcggtccaatatg 31936616  T
Q  100 acctactctagg-gagagagcagtcctccaatccactaagatgaaagtgatacaa 153  Q
    ||||| ||| || ||||||||||  |||||||||||||| ||||||||| |||||    
T  31936617 acctagtctgggagagagagcagctctccaatccactaatatgaaagtgttacaa 31936671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 21355966 - 21356182
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||  ||||| || | |||||||||||||||||| | |||||||||||||| |   || | || |||||||||||||||    
T  21355966 gtgtagagcaacaccacaagcatatacaaag-aacaaagataagcaatgaaagaa-gaaacaaacacaccaaaagattgttgacccagttcggtccaata 21356063  T
Q  98 tgacctactctag-ggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaat-tagcttaaaagctctcaaaagaacaa 195  Q
    ||||||| ||| | |||||||||||  ||||||||||||| |||||||||| ||| || |||||||||||||  || |||  |||||  || ||||||||    
T  21356064 tgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttactaa-gagttacaagaaaaataacttgcaagcttacacaagaacaa 21356162  T
Q  196 gacctaatctctacccattt 215  Q
    |||||||| |||||||||||    
T  21356163 gacctaatttctacccattt 21356182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 31077108 - 31076892
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaa-gcaatatagataagcaatgaaagaaaggaacaaacacaccaagat-ggtaactcagttcggtccaatat 98  Q
    ||||||| |||||  | ||||||||||||| |||| | | |||||| | ||||||| | |||||||| |||||||| ||||||  ||||  |||||||||    
T  31077108 gtgtagaacaacatcataagcataatcaaaagcaacaaatataagcca-gaaagaatgaaacaaacataccaagattggtaacctagtttagtccaatat 31077010  T
Q  99 gacctactctag-ggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    ||||||||||   ||||| |||||  ||||||||||||||||| ||||||||||||||| ||||||| |||||||||||| || || | |||||||||||    
T  31077009 gacctactctctaggagatagcagctctccaatccactaagataaaagtgatacaaatgggttacaataaattagcttaagagttcac-aaagaacaaga 31076911  T
Q  198 cctaatctctacccatttt 216  Q
    |||||| | || |||||||    
T  31076910 cctaatttttatccatttt 31076892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 216
Target Start/End: Original strand, 14521688 - 14521819
Alignment:
Q  84 agttcggtccaatatgacctactctag-ggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagct 182  Q
    ||||||||||||||||||||||||| | ||||||||||   ||||||| || |||||||||||||||||||||||||||||| ||||||||  || ||||    
T  14521688 agttcggtccaatatgacctactctcgaggagagagcacctctccaattcaataagatgaaagtgatacaaatgagttacaa-aaattagcacaagagct 14521786  T
Q  183 ctcaaaagaacaagacctaatctctacccatttt 216  Q
    | | ||||||||  ||||||| ||||| ||||||    
T  14521787 cac-aaagaacacaacctaatttctacacatttt 14521819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 153
Target Start/End: Original strand, 27165635 - 27165767
Alignment:
Q  23 taatcaaagcaatatagataagcaatgaaagaaa-ggaacaaacacaccaa-gatggta-actcagttcggtccaatatgacctactctaggg-agagag 118  Q
    |||||||||||| | ||||||||||||||||||| ||||||| |||||||| ||| ||  || |||| ||||||||||||||||||| | ||| | ||||    
T  27165635 taatcaaagcaaaa-agataagcaatgaaagaaaaggaacaaccacaccaaagattgtttacccagt-cggtccaatatgacctactatgggggacagag 27165732  T
Q  119 cagtcctccaatccactaagatgaaagtgatacaa 153  Q
     || ||||||||| |||||||||||||||||||||    
T  27165733 tagccctccaatcaactaagatgaaagtgatacaa 27165767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 22708949 - 22709102
Alignment:
Q  2 tgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaatat 98  Q
    ||||||||||||| |||||  ||  |||||||||| |||||||||| ||||| ||| |||||||||||||| |   || | ||  |||||||| ||||||    
T  22708949 tgtagagcaacaccacaagtgtatccaaagcaataaagataagcaa-gaaaggaag-aacaaacacaccaaaaaattgttgacctagttcggttcaatat 22709046  T
Q  99 gacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaa 153  Q
    || ||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||    
T  22709047 gatctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaa 22709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 1115159 - 1115055
Alignment:
Q  111 ggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacc 210  Q
    |||||||||||  ||||||||||||| ||| | | ||||||||||  |||||||||||| | |||||||||||  |||| |||||  |||||| |||| |    
T  1115159 ggagagagcagatctccaatccactatgataagaatgatacaaataggttacaagaaatcaacttaaaagctc-aaaaataacaaaccctaatttctatc 1115061  T
Q  211 catttt 216  Q
    ||||||    
T  1115060 catttt 1115055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 2973019 - 2973094
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||| ||||||||||||||||||  | |||||| | ||||||||| ||||||| |||||||||||||    
T  2973019 aaagagatacaaatgggttacaagaaattagcttcaacaagctcac-aaagaacaa-acctaatttctacccattttc 2973094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 5043715 - 5043640
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||||||||||||||||||||||  | |||||| | ||||||||| ||||||| ||||| |||||||    
T  5043715 aaagagatacaaatgagttacaagaaattagcttcaacaagctcac-aaagaacaa-acctaatttctactcattttc 5043640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 12195524 - 12195578
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  12195524 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 12195578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 16569106 - 16569046
Alignment:
Q  158 gttacaagaaattagcttaaa--agctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||||||||||||||||||||  ||||| |||| |||||| ||||||| |||||||||||||    
T  16569106 gttacaagaaattagcttaaacaagctcacaaa-gaacaaaacctaatttctacccattttc 16569046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 17763073 - 17763003
Alignment:
Q  147 gatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||||||||||||||||||||||||||||  | |||||| | |||||||||  |||||| |||||||||||||    
T  17763073 gatacaaatgagttacaagaaattagcttcaacaagctcac-aaagaacaa-ccctaatttctacccattttc 17763003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 26065286 - 26065233
Alignment:
Q  83 cagttcggtccaatatgacctactctagggagagagcagtcctccaatccacta 136  Q
    |||||||||||||  ||||||| ||| |||||||||||| ||||| ||||||||    
T  26065286 cagttcggtccaaattgacctagtctggggagagagcagccctccgatccacta 26065233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 26085255 - 26085202
Alignment:
Q  83 cagttcggtccaatatgacctactctagggagagagcagtcctccaatccacta 136  Q
    |||||||||||||  ||||||| ||| |||||||||||| ||||| ||||||||    
T  26085255 cagttcggtccaaattgacctagtctggggagagagcagccctccgatccacta 26085202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 28137494 - 28137563
Alignment:
Q  148 atacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    ||||||||| ||||||||||||||||||||  |||||| | |||||||||  |||||| |||||||||||||    
T  28137494 atacaaatgggttacaagaaattagcttaaacaagctcac-aaagaacaa-ccctaatttctacccattttc 28137563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 134; Significance: 7e-70; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 10047309 - 10047526
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||  || |||||||||||||||||    
T  10047309 gtgtagagcaacaccacaagcataatcaaagcaataaagataaacaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatg 10047408  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| ||||||||| |||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || |||||||||||    
T  10047409 acctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagac 10047508  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  10047509 ctaatttctacccatttt 10047526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 6743582 - 6743366
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagca-atatagataagcaatgaaagaaaggaacaaacacaccaagatggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| |||||||||||||||||| ||| ||||||| |||| |||||||||||||||||||||||||| | || |||||||||||||||||    
T  6743582 gtgtagagcaacaccacaagcataatcaaagcatatagagataagaaatggaagaaaggaacaaacacaccaagatgttgacccagttcggtccaatatg 6743483  T
Q  100 acctactcta-gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||| |||||||||||| |||||||||||||| |||||||||| |||||| ||| ||||| |||||||||| | ||||  ||||||||||||||    
T  6743482 acctaatctacgggagagagcagccctccaatccactatgatgaaagtgttacaaaagagctacaaaaaattagctt-atagcttacaaaagaacaagac 6743384  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  6743383 ctaatttctacccatttt 6743366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 54867114 - 54867330
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||  || |||||||||||||||||    
T  54867114 gtgtagagcaacaccacaagcataatcaaagtaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatg 54867213  T
Q  100 acctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacc 199  Q
    ||||| ||| |||||||||||| ||| ||||| |||| ||||||| || ||||||  ||||| |||||||||||||| |||||  || |||||||| |||    
T  54867214 acctagtctggggagagagcagcccttcaatcaactatgatgaaaatgttacaaaatagttataagaaattagcttataagcttacacaagaacaatacc 54867313  T
Q  200 taatctctacccatttt 216  Q
    |||| ||||||||||||    
T  54867314 taatttctacccatttt 54867330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 216
Target Start/End: Complemental strand, 42599740 - 42599523
Alignment:
Q  2 tgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatga 100  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | || || ||| |||||||||||    
T  42599740 tgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccaattcagtccaatatga 42599641  T
Q  101 cctactctagg---gagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    | || | | ||   |||||||||  |||||||||||||||||||||| || ||| |||||||||||||||||||||||| |||||  |||||||||||||    
T  42599640 cataatatgggggagagagagcaaccctccaatccactaagatgaaaatgttac-aatgagttacaagaaattagcttataagcttacaaaagaacaaga 42599542  T
Q  198 cctaatctctacccatttt 216  Q
    |||||| ||||||||||||    
T  42599541 cctaatttctacccatttt 42599523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 36315381 - 36315181
Alignment:
Q  16 acaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaag-atggtaactcagttcggtccaatatgacctactct-aggga 113  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| |||  ||||    
T  36315381 acaagcataatcaaagcaatagagataaacaatgaaagaaaggaacaaacacaccaagaatgttgacccagttcggtccaatatgacctaatctggggga 36315282  T
Q  114 gagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccat 213  Q
    ||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || |||| ||||||||||| |||||||||    
T  36315281 gagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattagcttagaagcttacacaagagcaagacctaatttctacccat 36315183  T
Q  214 tt 215  Q
    ||    
T  36315182 tt 36315181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 36329590 - 36329390
Alignment:
Q  16 acaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaag-atggtaactcagttcggtccaatatgacctactct-aggga 113  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||| |||  ||||    
T  36329590 acaagcataatcaaagcaatagagataaacaatgaaagaaaggaacaaacacaccaagaatgttgacccagttcggtccaatatgacctaatctggggga 36329491  T
Q  114 gagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccat 213  Q
    ||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || |||| ||||||||||| |||||||||    
T  36329490 gagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaattagcttagaagcttacacaagagcaagacctaatttctacccat 36329392  T
Q  214 tt 215  Q
    ||    
T  36329391 tt 36329390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 39245924 - 39246094
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| || | || |||||||||||||||||    
T  39245924 gtgtagagcaacaccacaggcataatcaaaacaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatg 39246023  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaat 169  Q
    ||||| |||  |||||||||||| |||||||||||||| |||||||||| |||||| ||||||||||||||    
T  39246024 acctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaat 39246094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 38152605 - 38152389
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    ||||| |||||||| ||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||| ||  || |||||||||||||||||    
T  38152605 gtgtatagcaacaccacaagcataatcaaagcacaa-agataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatg 38152507  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    || || ||| ||| |||||||||  ||||||||||||| | |||||||| |||||| |||||| |||||||||||||| |||||  || |||||||||||    
T  38152506 acataatctgggggagagagcagctctccaatccactatggtgaaagtgttacaaaagagttataagaaattagcttataagcttacacaagaacaagac 38152407  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| |||||| |||||    
T  38152406 ctaatttctaccaatttt 38152389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 59 - 221
Target Start/End: Complemental strand, 39774414 - 39774250
Alignment:
Q  59 aacaaacacac-caagatggtaactcagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatg 156  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| | |||||||  |||||||||||||| |||||||||||||||||     
T  39774414 aacaaacacacacaagatggtaactcagttcggtccaatatgacctactctgggggatagagcagctctccaatccactaaaatgaaagtgatacaaata 39774315  T
Q  157 agttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccattttcatgt 221  Q
     |||||||||||||||||||||||||| ||||  ||||||||||||| |||||| ||||||||||    
T  39774314 ggttacaagaaattagcttaaaagctcacaaagaaacaagacctaatttctaccaattttcatgt 39774250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 3796687 - 3796469
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaa-gatggta-actcagttcggtccaatat 98  Q
    |||||||| ||||  ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||| ||  || |||||| |||||||||    
T  3796687 gtgtagagtaacatcacaagcataatcaaagcaataaagataagcaatgaaagagaggaacaaacacaccaaagattgttgacccagttccgtccaatat 3796588  T
Q  99 gacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    |||||| | | ||| ||||||||   ||| ||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || ||||||||||    
T  3796587 gacctaatatgggggagagagcaactctctaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttgcacaagaacaaga 3796488  T
Q  198 cctaatctctacccatttt 216  Q
    |||||| ||||||||||||    
T  3796487 cctaatttctacccatttt 3796469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 24333742 - 24333957
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    ||||||||||||||   ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||    
T  24333742 gtgtagagcaacac---aagcataatcaaagcaataaagataagcaatgaaagaaagaaacaaacacaccaagattgttaactcagttcggtccaatatg 24333838  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaag-aacaaga 197  Q
    ||||| | |  ||||||||||||  ||||||||||||| |||||| ||| |||||| |||||| || ||||||||||| |||||  || ||| || || |    
T  24333839 acctaatttgggggagagagcagctctccaatccactatgatgaacgtgttacaaaagagttataaaaaattagcttacaagcttacacaagaaaaaaaa 24333938  T
Q  198 cctaatctctacccatttt 216  Q
    |||||| ||||||||||||    
T  24333939 cctaatttctacccatttt 24333957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 59 - 221
Target Start/End: Original strand, 18377348 - 18377511
Alignment:
Q  59 aacaaacacaccaagatggtaactcagttcggtccaatatgacctactctag-ggagagagcagtcctccaatccactaagatgaaagtgatacaaatga 157  Q
    ||||||||||||||||||||||| |||||| || | |||||||||||||| | ||||||||||| |||||| |||||||||||||||||||||||||||     
T  18377348 aacaaacacaccaagatggtaacccagttcagttctatatgacctactctggaggagagagcagccctccattccactaagatgaaagtgatacaaatgg 18377447  T
Q  158 gttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccattttcatgt 221  Q
    |||| ||||||| ||||||||||||| ||||  |||||| |||||| |||||||||||||||||    
T  18377448 gttataagaaatcagcttaaaagctcacaaagaaacaagccctaatttctacccattttcatgt 18377511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 25862189 - 25861983
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| || | ||||||||||||||||||||    
T  25862189 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaggaataaacacaccaagattgttgactcagttcggtccaatatg 25862090  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| | | ||| ||||||| | |||||||||||||| |||||||||           ||||||||||||||||||| |||||  || |||||||||||    
T  25862089 acctaatatggggaagagagcggccctccaatccactatgatgaaagt-----------gttacaagaaattagcttataagcttacacaagaacaagac 25862001  T
Q  199 ctaatctctacccatttt 216  Q
    |||||  |||||||||||    
T  25862000 ctaattcctacccatttt 25861983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 5147607 - 5147824
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| |||| |||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| || | || |||||||||||||||||    
T  5147607 gtgtagagcaacaccacaaacataatcaaaacaatagagataagcaatgaaagaaaggaacaaacacaccgagattgttgacccagttcggtccaatatg 5147706  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| | |  ||||| ||||||  ||||| |||| || |||||||||| ||||||  |||||||||||| ||||||  |||||  || ||||||||| |    
T  5147707 acctaatttgggggagggagcagctctccagtccattatgatgaaagtgttacaaaatagttacaagaaaatagcttgcaagcttacacaagaacaaggc 5147806  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  5147807 ctaatttctacccatttt 5147824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 5269358 - 5269154
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| | ||||| ||||||||||||||||||||||| ||||| || | ||  ||||||||||||||||    
T  5269358 gtgtagagcaacaccacaagcataatcaaagcaataaatataagaaatgaaagaaaggaacaaacacaacaagattgttgacctagttcggtccaatatg 5269259  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||  |||||||||||| |||||||||||||| |||||||||           ||||||||||||||||||| |||||  || |||||||||||    
T  5269258 acctaatctgggggagagagcagccctccaatccactatgatgaaagt-----------gttacaagaaattagcttataagcttacacaagaacaagac 5269170  T
Q  199 ctaatctctacccatt 214  Q
    ||||| ||||||||||    
T  5269169 ctaatttctacccatt 5269154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 38 - 216
Target Start/End: Complemental strand, 16623424 - 16623243
Alignment:
Q  38 agataagcaatgaaagaaa-ggaacaaacacaccaagatggta-actcagttcggtccaatatgacctactctag-ggagagagcagtcctccaatccac 134  Q
    ||||||||||||||||||| ||||||||||||||||||| ||  || ||||||||| |||||||||||| ||| | |||||||||||  |||||||||||    
T  16623424 agataagcaatgaaagaaaaggaacaaacacaccaagattgttgacccagttcggttcaatatgacctaatctggaggagagagcagctctccaatccac 16623325  T
Q  135 taagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    || |||||||||| |||||| ||||||||||||||||||| | |||||  || |||||||||||||||| ||||||||||||    
T  16623324 tatgatgaaagtgttacaaaagagttacaagaaattagctaataagcttacagaagaacaagacctaatttctacccatttt 16623243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 34495974 - 34495822
Alignment:
Q  16 acaagcataatcaaagcaatatagataagcaatgaaagaaaggaa-caaacacaccaagatggtaactcagttcggtccaatatgacctactctaggg-a 113  Q
    ||||||||||||||||||||| | | |||||||||||||||| || |||||||||||||||||||||  |||||||||||| ||||| |||||| ||| |    
T  34495974 acaagcataatcaaagcaataaa-acaagcaatgaaagaaagaaaacaaacacaccaagatggtaacctagttcggtccaacatgacttactctggggga 34495876  T
Q  114 gagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaa 167  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  34495875 gagagcagccctccaatccactaagatgaaagtgatacaaatgggttacaagaa 34495822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 5396839 - 5396623
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||| |||||||  | ||||||||||||||||||||||| ||||||||||| |   || | || |||||||||||||||    
T  5396839 gtgtagagcaacaccacaagcataaacaaagcacaa-agataagcaatgaaagaaaggaagaaacacaccaaaagattgttgacccagttcggtccaata 5396741  T
Q  98 tgacctactctag-ggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| ||| | |||||||||||  ||||||||||||| |||||||||| | |||| ||||||||||||| ||||||  |||||  || |||||||||    
T  5396740 tgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttgcaaa-gagttacaagaaaatagcttgcaagcttacacaagaacaag 5396642  T
Q  197 acctaatctctacccattt 215  Q
    ||||||| |||||||||||    
T  5396641 acctaatttctacccattt 5396623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 3777480 - 3777695
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    ||||||| ||| || ||||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||| || | || ||||||||||||||||     
T  3777480 gtgtagaacaaaaccacaagcataatcaaagcacaa-agataagcaatgaaagaaaggaacaaacacaccgagattgttgacccagttcggtccaatata 3777578  T
Q  100 acctactctag-ggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||||| |||||||| ||  ||||||||||||| |||||||||| |||||| ||||||||||||| ||||||  || ||  || ||||||||||     
T  3777579 acctaatctagaggagagagtagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgcaaacttacacaagaacaagat 3777677  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  3777678 ctaatttctacccatttt 3777695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 5143189 - 5143406
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    ||||||| |||||| |||| |||||||||| ||||| ||||||||||||||||||||||||||||||||  |||| ||  ||  ||||||||||||||||    
T  5143189 gtgtagaacaacaccacaaacataatcaaaacaatagagataagcaatgaaagaaaggaacaaacacactgagattgttgacctagttcggtccaatatg 5143288  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| |||||||||  |||||| |||||| |||||||||| ||||||  | |||||||||| ||||||  ||||   || |||||||||||    
T  5143289 acctaatctgggggagagagcagctctccaacccactatgatgaaagtgttacaaaaaatttacaagaaaatagcttgcaagcatacacaagaacaagac 5143388  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||| ||||||    
T  5143389 ctaatttctactcatttt 5143406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16630847 - 16630643
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaa-ggaacaaacacaccaagatggta-actcagttcggtccaatat 98  Q
    ||||| |||||||| |||||||||||||||| || | ||||||||||||||||||| ||||||||||||||||| | ||  ||  |||||||||||||||    
T  16630847 gtgtaaagcaacaccacaagcataatcaaag-aacaaagataagcaatgaaagaaaaggaacaaacacaccaaggttgttgacctagttcggtccaatat 16630749  T
Q  99 gacctactctag-ggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    ||| || ||| | ||||||| |||  ||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || ||||||||||    
T  16630748 gacataatctggaggagagaacagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaaga 16630649  T
Q  198 cctaat 203  Q
     |||||    
T  16630648 tctaat 16630643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 5112226 - 5112383
Alignment:
Q  59 aacaaacacaccaagatggtaactcagttcggtccaatatgacctactctaggga-gagagcagtcctccaatccactaagatgaaagtgatacaaatga 157  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||| | |||  ||||||||  |||||||||||||| ||||||||| ||||||||     
T  5112226 aacaaacacaccaagatggtaacccagttcggtccaatatgatctactttgggggtgagagcagctctccaatccactaatatgaaagtgttacaaatgg 5112325  T
Q  158 gttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||||||||||||||||||||| |||  |||| ||| ||||||||| | |||| |||||    
T  5112326 gttacaagaaattagcttaaaaactcataaaa-aacgagacctaatttgtacctatttt 5112383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 31985800 - 31985585
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||| | |||||||||  |||||||||| |||||||||| ||||| ||| |||||||||||||| |   || | || |||||||||||||||    
T  31985800 gtgtagagcaactccacaagcatatacaaagcaataaagataagcaa-gaaaggaag-aacaaacacaccaaaagattgttgacccagttcggtccaata 31985703  T
Q  98 tgacctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| ||| ||||||||||||  ||||||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||  || |||||||||    
T  31985702 tgacctaatctggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaaaatagcttgcaagcttacacaagaacaag 31985604  T
Q  197 acctaatctctacccattt 215  Q
     |||||| |||||||||||    
T  31985603 tcctaatttctacccattt 31985585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 59 - 218
Target Start/End: Complemental strand, 1983408 - 1983249
Alignment:
Q  59 aacaaacacaccaagatggtaactcagttcggtccaatatgacctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatga 157  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||| |  |||||| |||||  ||||||||||||| ||| ||||||||||||| |     
T  1983408 aacaaacacaccaatatggtaacccagttcggtccaatatgacctactatgggggagatagcagctctccaatccactaggatcaaagtgatacaaaggg 1983309  T
Q  158 gttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccattttca 218  Q
    ||||||||||||||||||  |||||| | ||||||||| || |||| |||| || ||||||    
T  1983308 gttacaagaaattagcttgcaagctcac-aaagaacaaaacataatttctatcctttttca 1983249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 8689647 - 8689498
Alignment:
Q  5 agagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaatatgac 101  Q
    |||||||||| |||||||||| |||||||  | |||||||||||||||||||| |||||||||||||| |   || | |  ||||||||||||||||||     
T  8689647 agagcaacaccacaagcataaacaaagcacaa-agataagcaatgaaagaaagtaacaaacacaccaaaagattgttgatccagttcggtccaatatgat 8689549  T
Q  102 ctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaa 153  Q
    ||| | | ||| ||||| ||  |||| |||||||| |||||||||| |||||    
T  8689548 ctaatat-gggggagaggagctctcctatccactatgatgaaagtgttacaa 8689498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 31474239 - 31474163
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaaaagctctc-aaaagaacaagacctaatctctacccattttc 217  Q
    |||| ||||||||||||||||||||||||||||| ||    ||| |||||||||||||||||| |||||||||||||    
T  31474239 aaagagatacaaatgagttacaagaaattagcttcaacaaactcaaaaagaacaagacctaatttctacccattttc 31474163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 124 - 216
Target Start/End: Original strand, 37781917 - 37782008
Alignment:
Q  124 ctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||||||||||||  || |||||||||||||   |||||||||||||||||||||| ||| | |||||||||  | |||| ||||||||||||    
T  37781917 ctccaatccactataataaaagtgatacaaagaggttacaagaaattagcttaaaaactcac-aaagaacaaatcttaatttctacccatttt 37782008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 18709173 - 18709227
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||||||||||||||||||    
T  18709173 cagttcggtccaatctgacctagtctgggggagagagcagtcctccaatccacta 18709227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 28468695 - 28468542
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||||| |  ||||||||   |||||||||| ||||| ||| |||||||||||||| |   || | || |||||| | ||||||    
T  28468695 gtgtagagcaacaccacaagcaaatacaaagcaaccaagataagcaa-gaaaggaag-aacaaacacaccaaaagattgttgacccagttcag-ccaata 28468599  T
Q  98 tgacctactctag-ggagagagcagtcctccaatccactaagatgaaagtgatacaa 153  Q
    ||||||| ||| | |||||||||||  ||||||||||||| |||||||||| |||||    
T  28468598 tgacctaatctggaggagagagcagctctccaatccactatgatgaaagtgttacaa 28468542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 18847476 - 18847423
Alignment:
Q  83 cagttcggtccaatatgacctactctagggagagagcagtcctccaatccacta 136  Q
    |||||||||||||  ||||||| ||| |||||||||||| ||||||||||||||    
T  18847476 cagttcggtccaaattgacctagtctggggagagagcagccctccaatccacta 18847423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 22134627 - 22134680
Alignment:
Q  83 cagttcggtccaatatgacctactctagggagagagcagtcctccaatccacta 136  Q
    |||||||||||||  ||||||| ||| |||||||||||| ||||||||||||||    
T  22134627 cagttcggtccaaattgacctagtctggggagagagcagccctccaatccacta 22134680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 21688475 - 21688436
Alignment:
Q  16 acaagcataatcaaagcaatatagataagcaatgaaagaa 55  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  21688475 acaatcataatcaaagcaataaagataagcaatgaaagaa 21688436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 379468 - 379393
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||| ||||||||||||||||||  | |||||| | ||||||||| ||||||| |||||||||||||    
T  379468 aaagcgatacaaatgggttacaagaaattagcttcaacaagctcac-aaagaacaa-acctaatttctacccattttc 379393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 8665496 - 8665421
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||| ||||||||||||||||||  | |||||||| |||||||||  |||||| |||||||||||||    
T  8665496 aaagagatacaaatgggttacaagaaattagcttcaacaagctctc-aaagaacaa-ccctaatttctacccattttc 8665421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 12073480 - 12073405
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||||||||||| ||||||||||  | |||||| | ||||||||| ||||||| |||||||||||||    
T  12073480 aaagagatacaaatgagttacaataaattagcttcaacaagctcac-aaagaacaa-acctaatttctacccattttc 12073405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 16931798 - 16931852
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  16931798 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 16931852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 16934152 - 16934206
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  16934152 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 16934206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 22780382 - 22780436
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  22780382 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 22780436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 22782747 - 22782801
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  22782747 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 22782801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 44599847 - 44599901
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  44599847 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 44599901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 52467434 - 52467509
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    ||||||||||||||| ||||||||| ||||||||  | |||||| | ||||||||| ||||||| |||||||||||||    
T  52467434 aaagtgatacaaatgggttacaagatattagcttcaacaagctcac-aaagaacaa-acctaatttctacccattttc 52467509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 5871908 - 5871834
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    ||||||||| ||||| ||||||||||||| ||||||  |||||| | ||||||||| ||||||| ||||||||||||    
T  5871908 aaagtgataaaaatgggttacaagaaatttgcttaaacaagctcac-aaagaacaa-acctaatttctacccatttt 5871834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 6656044 - 6656011
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  6656044 aaagagatacaaatgagttacaagaaattagctt 6656011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 24969200 - 24969167
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  24969200 aaagagatacaaatgagttacaagaaattagctt 24969167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 26364324 - 26364291
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  26364324 aaagagatacaaatgagttacaagaaattagctt 26364291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 35662529 - 35662496
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  35662529 aaagagatacaaatgagttacaagaaattagctt 35662496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 45687267 - 45687338
Alignment:
Q  147 gatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    ||||||||||||||| |||||||||||||  | |||||| | ||||||||| ||||||| ||| |||||||||    
T  45687267 gatacaaatgagttataagaaattagctttgacaagctcac-aaagaacaaaacctaatttcttcccattttc 45687338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 46147471 - 46147504
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  46147471 aaagagatacaaatgagttacaagaaattagctt 46147504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 48893718 - 48893751
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  48893718 aaagagatacaaatgagttacaagaaattagctt 48893751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 50673927 - 50673960
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  50673927 aaagagatacaaatgagttacaagaaattagctt 50673960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 3e-66; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 47098991 - 47098773
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || | || |||||||||||||||||    
T  47098991 gtgtagagcaacaccacaagtataatcaaagcaataaagataagcaatcaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatg 47098892  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||| | |||  |||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||  |||||||||||| |    
T  47098891 accgaatctgggggagagagcagccctccaatccactaagatgaaagtgttac-aatgagttacaagaaattagcttataagcttacaaaagaacaagtc 47098793  T
Q  199 ctaatctctacccattttca 218  Q
    ||||| ||||||||||||||    
T  47098792 ctaatttctacccattttca 47098773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 19072857 - 19073075
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaa-gatggta-actcagttcggtccaatat 98  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| ||  || ||||||||||||||||    
T  19072857 gtgtagagcaacaccacaagcataatcaaaacaataaagataagcaatgaaagaaaggaacaaacacaccaaagattgttgacccagttcggtccaatat 19072956  T
Q  99 gacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    |||||| ||| ||| |||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||  ||||||||||| |    
T  19072957 gacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaata 19073056  T
Q  198 cctaatctctacccatttt 216  Q
    |||||| ||||||||||||    
T  19073057 cctaatttctacccatttt 19073075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 19120747 - 19120965
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaa-gatggta-actcagttcggtccaatat 98  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| ||  || ||||||||||||||||    
T  19120747 gtgtagagcaacaccacaagcataatcaaaacaataaagataagcaatgaaagaaaggaacaaacacaccaaagattgttgacccagttcggtccaatat 19120846  T
Q  99 gacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    |||||| ||| ||| |||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||  ||||||||||| |    
T  19120847 gacctaatctgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaata 19120946  T
Q  198 cctaatctctacccatttt 216  Q
    |||||| ||||||||||||    
T  19120947 cctaatttctacccatttt 19120965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 2 - 216
Target Start/End: Complemental strand, 16124683 - 16124466
Alignment:
Q  2 tgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaa-ggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    ||||||||||||| |||| |||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| ||  ||||||||||||||||||||    
T  16124683 tgtagagcaacaccacaaacataatcaaagcaataaagataagctatgaaagaaaaggaacaaacacaccaagattgttgactcagttcggtccaatatg 16124584  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| ||||||||| |||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || |||||||||||    
T  16124583 acctaatctgggggagagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacataagaacaagac 16124484  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  16124483 ctaatttctacccatttt 16124466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 29651741 - 29651958
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |  || |||||||||||||||||    
T  29651741 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaaacacaccaagatttttgacccagttcggtccaatatg 29651840  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| || ||||||||||||| |||| |||||  || |||||||||||    
T  29651841 acctaatctgggggagagagcagcactccaatccactatgatgaaagtgttacaaaagaattacaagaaattaacttataagcttacacaagaacaagac 29651940  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  29651941 ctaatttctacccatttt 29651958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13598328 - 13598545
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | || |||||||||||||||||    
T  13598328 gtgtagagaaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatg 13598427  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||  |||||||||||| ||| |||||||||| |||||||||| |||||| ||| ||||||||||||||||| |||||  || |||||||||||    
T  13598428 acctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaagagatacaagaaattagcttataagcttacacaagaacaagac 13598527  T
Q  199 ctaatctctacccatttt 216  Q
     |||| ||||| ||||||    
T  13598528 ttaatttctactcatttt 13598545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 47704103 - 47703886
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| |||||  |||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||  || |||||||||||||||||    
T  47704103 gtgtagagcaacaccacaagtttaatcaaagcaataaagataagcaatgaaagaaaggaaaaaacacaccaagattgttgacccagttcggtccaatatg 47704004  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| || |||||||||||||||||| |||||  || |||||||||||    
T  47704003 acctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagcttacaagcttacacaagaacaagac 47703904  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  47703903 ctaatttctacccatttt 47703886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 9476206 - 9476408
Alignment:
Q  16 acaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatgacctactctaggg-a 113  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||| ||  || |||||||||||||||||||||| ||||||| |    
T  9476206 acaagcataatcaaagcaaaaaagataaacaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctagggga 9476305  T
Q  114 gagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccat 213  Q
    ||||||||  ||||||||||||| |||||||||  |||||| |||||| |||||||||||||| |||||  || |||||||||||||||| |||| ||||    
T  9476306 gagagcagctctccaatccactatgatgaaagtattacaaaagagttataagaaattagcttacaagcttacacaagaacaagacctaatttctatccat 9476405  T
Q  214 ttt 216  Q
    |||    
T  9476406 ttt 9476408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 27104539 - 27104362
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || | || ||||||||||||||||     
T  27104539 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaataaaggaacaaacacaccaagattgttgacacagttcggtccaatata 27104440  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagctta 176  Q
    ||||| |||  ||||||||||||  ||||||||||||| |||||||||| |||||| |||||||||||||||||||||    
T  27104439 acctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagctta 27104362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 47103008 - 47102800
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||| | || | || |||||||||||||||||    
T  47103008 gtgtagagcaacaccacaagtataatcaaagcaataaagataagcaatcaaagaaaggaacaaacacaccaaaattgttgacccagttcggtccaatatg 47102909  T
Q  100 acctactcta-gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||| |||||||||||| | |||||||||||||||||||| || ||| ||||||||||||||||||| |||| ||||   |||||||||||| |    
T  47102908 acctaatctaggggagagagcagccatccaatccactaagatgaaaatgttac-aatgagttacaagaaattaacttataagcatacaaaagaacaagtc 47102810  T
Q  199 ctaatctcta 208  Q
    ||||| ||||    
T  47102809 ctaatttcta 47102800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 26645065 - 26644849
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||| |||||||  | ||||||||||||||||||||||||||||||||||| |   || | || |||||||||||||||    
T  26645065 gtgtagagcaacaccacaagcataaacaaagcacaa-agataagcaatgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaata 26644967  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| ||| ||| |||||||||  |||||||||| || |||||||||| |||||| ||||||||||||| ||||||  |||||  || |||||||||    
T  26644966 tgacctaatctgggggagagagcagctctccaatccattatgatgaaagtgttacaaa-gagttacaagaaaatagcttgcaagcttacacaagaacaag 26644868  T
Q  197 acctaatctctacccattt 215  Q
    ||||||| |||||||||||    
T  26644867 acctaatttctacccattt 26644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 775602 - 775757
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || | || || ||||||||||||||    
T  775602 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaaacacatcaagattgttgacccaattcggtccaatatg 775701  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaa 154  Q
    ||||| |||  ||||||||| ||  |||||||||||||||||||||||| ||||||    
T  775702 acctaatctgggggagagagtagctctccaatccactaagatgaaagtgttacaaa 775757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 32889368 - 32889586
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatg-aaagaaaggaacaaacacaccaagatggtaactc-agttcggtccaatat 98  Q
    |||||||||||||| ||||| |||| |||||||||| |||||||||||| ||||| |||||||||||||||||||| ||   || |||||||||||||||    
T  32889368 gtgtagagcaacaccacaagtataaccaaagcaataaagataagcaatgaaaagagaggaacaaacacaccaagattgttgatctagttcggtccaatat 32889467  T
Q  99 gacctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaag 196  Q
    |||||| |||  |||| |||||||  |||||||||||||||||||||||| ||| ||||||||||||| ||| ||||||  |||||  || |||||||||    
T  32889468 gacctagtctgggggatagagcagctctccaatccactaagatgaaagtgttac-aatgagttacaagaaaaatagcttgcaagcttacacaagaacaag 32889566  T
Q  197 acctaatctctacccatttt 216  Q
     |||||| ||||||||||||    
T  32889567 tcctaatttctacccatttt 32889586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 17345686 - 17345470
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaa-gatggt-aactcagttcggtccaatat 98  Q
    ||||||| |||||| | ||||||||||||||| ||| ||||||||||||||||||| ||||||| |||  || |||  | ||| |||||||||| |||||    
T  17345686 gtgtagaacaacaccataagcataatcaaagccataaagataagcaatgaaagaaatgaacaaaaacataaaagattattaacccagttcggtctaatat 17345587  T
Q  99 gacctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    |||||||||| |||| |||| ||  |||||||||||||||||||| ||| |||||||| | |||||||||||||| ||| ||| | | ||||||||| ||    
T  17345586 gacctactctggggaaagaggagctctccaatccactaagatgaacgtggtacaaatgtgctacaagaaattagcataagagcccac-aaagaacaaaac 17345488  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  17345487 ctaatttctacccatttt 17345470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 3281637 - 3281853
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta---actcagttcggtccaata 97  Q
    |||||||||||||| ||||| |||| |||||||  | ||||||||||||||||||||||||||||||| ||| |   ||   || |||||||||||||||    
T  3281637 gtgtagagcaacaccacaagaataaacaaagcacaa-agataagcaatgaaagaaaggaacaaacacatcaaaagattattgacccagttcggtccaata 3281735  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| ||| ||| |||||||||  ||||||||||| | |||||||||| |||||| ||||||||||||| ||||||  |||||  || |||||||||    
T  3281736 tgacctaatctgggggagagagcagctctccaatccacgatgatgaaagtgttacaaa-gagttacaagaaaatagcttgcaagcttacacaagaacaag 3281834  T
Q  197 acctaatctctacccattt 215  Q
    ||||||| |||||||||||    
T  3281835 acctaatttctacccattt 3281853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 59 - 216
Target Start/End: Original strand, 22819416 - 22819575
Alignment:
Q  59 aacaaacacac-caagatggtaactcagttcggtccaatatgacctactctaggg--agagagcagtcctccaatccactaagatgaaagtgatacaaat 155  Q
    ||||||||||| |||||||||||| || || |||||||||||||||||||| |||  |||||| || |||||||||||| ||||||||||||||||||||    
T  22819416 aacaaacacacacaagatggtaacccaatttggtccaatatgacctactctggggggagagagtagccctccaatccaccaagatgaaagtgatacaaat 22819515  T
Q  156 gagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    ||||||||||||||||||||   ||||| | |||||| ||||| |||| |||| |||||||    
T  22819516 gagttacaagaaattagctttttagctcac-aaagaataagacataatttctaaccatttt 22819575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 37069700 - 37069912
Alignment:
Q  2 tgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaatat 98  Q
    ||||||||||||| |||||||||| |||||||  | |||||||||| |||| ||||||||||||||||||| |   || | || ||||||||||||||||    
T  37069700 tgtagagcaacaccacaagcataaacaaagcacaa-agataagcaacgaaataaaggaacaaacacaccaaaagattgttgacccagttcggtccaatat 37069798  T
Q  99 gacctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    |||||| |||  |||||||||||   |||| |||||||| |||||||||| |||||| |||||||   ||| ||| ||  |||||  || ||||||||||    
T  37069799 gacctaatctgggggagagagcatctctccgatccactatgatgaaagtgttacaaa-gagttac---aaaatagtttgcaagcttacacaagaacaaga 37069894  T
Q  198 cctaatctctacccattt 215  Q
    |||||| |||||||||||    
T  37069895 cctaatttctacccattt 37069912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 211
Target Start/End: Complemental strand, 21536736 - 21536525
Alignment:
Q  2 tgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaatat 98  Q
    ||||||||||||| |||||||||  |||||||  | |||||||| |||||||||||||||||||||||||| |   || | || |||||||||  || ||    
T  21536736 tgtagagcaacaccacaagcatagacaaagcacaa-agataagcgatgaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtaaaaaat 21536638  T
Q  99 gacctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    |||||| |||  ||||||||||||  |||||||||||||  ||||||||| |||||| ||||||||||||| ||||||  |||||  || |||||||| |    
T  21536637 gacctaatctgggggagagagcagctctccaatccactataatgaaagtgttacaaa-gagttacaagaaaatagcttgcaagcttacacaagaacaata 21536539  T
Q  198 cctaatctctaccc 211  Q
    | |||| |||||||    
T  21536538 cttaatttctaccc 21536525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 9023999 - 9023794
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaa-caaacacaccaagatggtaactcagttcggtccaatatg 99  Q
    ||||| |||||||| |||||||||||||| |||||| ||||||| || | ||||||| || ||||||||      |||||||  |||||| |||||||||    
T  9023999 gtgtatagcaacaccacaagcataatcaatgcaataaagataagaaa-gcaagaaagaaaacaaacaca------tggtaacctagttcgctccaatatg 9023907  T
Q  100 acctactctagggag-agagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| | | ||||  | || ||  ||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||||||| | |||||| |||||    
T  9023906 acctattatggggaatatagtagctctccaatccactaagatgaaagtgatacaaatgggatacaataaattagcataaaagctcac-aaagaataagac 9023808  T
Q  199 ctaatctctaccca 212  Q
    ||||| ||||||||    
T  9023807 ctaatttctaccca 9023794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 13604788 - 13604574
Alignment:
Q  4 tagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaatatga 100  Q
    ||||||||||  |||||||||  |||||||||| ||||||| |||||||||| |||||||||||||||| |   || | || ||||| ||| ||||||||    
T  13604788 tagagcaacatcacaagcatatacaaagcaataaagataagtaatgaaagaa-ggaacaaacacaccaaaagattgttgacccagttaggttcaatatga 13604690  T
Q  101 cctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaat-tagcttaaaagctctcaaaagaacaagac 198  Q
    |||| | | ||| |||||||||  ||||||||||||| ||||||| || |||||| |||||||||||||  ||||||  || ||  || |||||||||||    
T  13604689 cctaatatgggggagagagcagctctccaatccactatgatgaaaatgttacaaa-gagttacaagaaaaatagcttgcaaacttacacaagaacaagac 13604591  T
Q  199 ctaatctctacccattt 215  Q
    ||||| |||||||||||    
T  13604590 ctaatttctacccattt 13604574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 50521270 - 50521165
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacacc-aaga--tggtaactcagttcggtccaata 97  Q
    ||||||| |||||| |||| |||||||||||||||| ||| || |||||||||||||||||||||||||| ||||  ||||||| ||||||||| |||||    
T  50521270 gtgtagaacaacaccacaaacataatcaaagcaataaagagaaacaatgaaagaaaggaacaaacacaccaaagatttggtaacccagttcggttcaata 50521171  T
Q  98 tgacct 103  Q
    ||||||    
T  50521170 tgacct 50521165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 40816844 - 40816765
Alignment:
Q  136 aagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccattt 215  Q
    |||||||||||| |||||| ||||||||||||||||||||| |||||  ||||||||||||||||||| ||||| |||||    
T  40816844 aagatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaagacctaatttctactcattt 40816765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40816899 - 40816844
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaa 56  Q
    |||||||||||||| || |||||||||||||||||| ||||||| |||||||||||    
T  40816899 gtgtagagcaacaccacgagcataatcaaagcaataaagataagtaatgaaagaaa 40816844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 8550867 - 8550942
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||||||||||||||||||||||||  |||||| | ||||||||| ||||||| |||||||||||||    
T  8550867 aaagggatacaaatgagttacaagaaattagcttaaacaagctcac-aaagaacaa-acctaatttctacccattttc 8550942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 47179982 - 47179929
Alignment:
Q  83 cagttcggtccaatatgacctactctagggagagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| |||||||||||| ||||||||||||||    
T  47179982 cagttcggtccaatctgacctagtctggggagagagcagccctccaatccacta 47179929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 19358899 - 19358794
Alignment:
Q  110 gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaagacctaatctcta 208  Q
    ||||||||||||  ||||||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||  || ||||||||||||||   ||||    
T  19358899 gggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaaaatagcttgcaagcttacacaagaacaagacctagattcta 19358801  T
Q  209 cccattt 215  Q
    |||||||    
T  19358800 cccattt 19358794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 24202825 - 24202720
Alignment:
Q  110 gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaagacctaatctcta 208  Q
    ||||||||||||  ||||||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||  || ||||||||||||||   ||||    
T  24202825 gggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaaaatagcttgcaagcttacacaagaacaagacctagattcta 24202727  T
Q  209 cccattt 215  Q
    |||||||    
T  24202726 cccattt 24202720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 19361599 - 19361431
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||||| |  ||||||||   ||||||||||  |||| ||| |||||||||||||| |   || | || |||||| ||| ||||    
T  19361599 gtgtagagcaacaccacaagcaaatacaaagcaaccaagataagcaagaaaaggaag-aacaaacacaccaaaagattgttgacccagttcagtc-aata 19361502  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 168  Q
    ||||||| | | ||| |||||||||  ||||||||||||| |||||||||| |||||| | |||||||||||    
T  19361501 tgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 19361431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 19380239 - 19380071
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||||| |  ||||||||   ||||||||||  |||| ||| |||||||||||||| |   || | || |||||| ||| ||||    
T  19380239 gtgtagagcaacaccacaagcaaatacaaagcaaccaagataagcaagaaaaggaag-aacaaacacaccaaaagattgttgacccagttcagtc-aata 19380142  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 168  Q
    ||||||| | | ||| |||||||||  ||||||||||||| |||||||||| |||||| | |||||||||||    
T  19380141 tgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 19380071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 47177631 - 47177578
Alignment:
Q  83 cagttcggtccaatatgacctactctagggagagagcagtcctccaatccacta 136  Q
    ||||||| |||||| ||||||| ||| |||||||||||| ||||||||||||||    
T  47177631 cagttcgatccaatctgacctagtctggggagagagcagccctccaatccacta 47177578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 48382532 - 48382471
Alignment:
Q  115 agagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagctta 176  Q
    |||||| | |||||||||| || ||||||||||||||||||  |||||||||||||| ||||    
T  48382532 agagcaattctccaatccaatatgatgaaagtgatacaaataggttacaagaaattaactta 48382471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 188
Target Start/End: Complemental strand, 35109623 - 35109515
Alignment:
Q  80 actcagttcggtccaatatgacctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaa 179  Q
    |||||||| ||||||| |||||||| |||  |||||||  ||  |||  |||||||| ||| | |  |||||||||  ||||||||||||||||||||||    
T  35109623 actcagtttggtccaaaatgacctaatctgaggagagacaagctctctgatccactatgataagatagatacaaataggttacaagaaattagcttaaaa 35109524  T
Q  180 gctctcaaa 188  Q
    |||| ||||    
T  35109523 gctcacaaa 35109515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 40122278 - 40122314
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaaa 178  Q
    |||||||||||||||||||| ||||||||||||||||    
T  40122278 aaagtgatacaaatgagttataagaaattagcttaaa 40122314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 9459428 - 9459482
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  9459428 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 9459482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 9463255 - 9463309
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  9463255 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 9463309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 16226437 - 16226383
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  16226437 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 16226383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 16231833 - 16231779
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  16231833 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 16231779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 193699 - 193666
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  193699 aaagagatacaaatgagttacaagaaattagctt 193666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 2617789 - 2617732
Alignment:
Q  80 actcagttcggtccaatatgacctactct-agggagagagcagtcctccaatccacta 136  Q
    ||||||||||||||||  ||||||| ||| ||||||||||||| ||||| ||||||||    
T  2617789 actcagttcggtccaaattgacctagtctgagggagagagcagccctccgatccacta 2617732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 10925311 - 10925278
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  10925311 aaagagatacaaatgagttacaagaaattagctt 10925278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 112
Target Start/End: Original strand, 13137985 - 13138014
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg 112  Q
    ||||||||||||||||||||||||||||||    
T  13137985 cagttcggtccaatatgacctactctaggg 13138014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 216
Target Start/End: Complemental strand, 32737083 - 32736947
Alignment:
Q  80 actcagttcggtccaatatgacctactctagg-gagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaa 178  Q
    |||||| ||| ||||| |||||||||||| || ||||||| |   |||  ||| |||| |||||| ||||||||||   ||||||| |||||||||||||    
T  32737083 actcagatcgatccaaaatgacctactctgggagagagagaaactctctgatcaactatgatgaaggtgatacaaagaggttacaaaaaattagcttaaa 32736984  T
Q  179 agctctcaaaagaacaagacctaatctctacccatttt 216  Q
    || ||   |||||||||  |||||| ||||||||||||    
T  32736983 agttc-ataaagaacaaaccctaatttctacccatttt 32736947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 42298055 - 42298088
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  42298055 aaagagatacaaatgagttacaagaaattagctt 42298088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 50169290 - 50169323
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  50169290 aaagagatacaaatgagttacaagaaattagctt 50169323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 196988 - 197024
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaaa 178  Q
    |||| ||||||||||||||||||||||||| ||||||    
T  196988 aaagggatacaaatgagttacaagaaattaacttaaa 197024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 834247 - 834283
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaaa 178  Q
    |||| |||||||||| |||||||||||||||||||||    
T  834247 aaagggatacaaatgggttacaagaaattagcttaaa 834283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 17319157 - 17319113
Alignment:
Q  83 cagttcggtccaatatgacctactctagggagagagcagtcctcc 127  Q
    |||||||||||||  ||||||| |||||||||||||||| |||||    
T  17319157 cagttcggtccaaattgacctagtctagggagagagcagccctcc 17319113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 20522150 - 20522367
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| || | || |||||||||||||||||    
T  20522150 gtgtagagcaacaccacaagcataatcaaagcaataaagataagaaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatg 20522249  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||  |||||||||||  |||||||||||||| |||||||||| |||||| | ||||||||||||||| ||| |||||  ||||||||||||||    
T  20522250 acctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagggttacaagaaattagattataagcttacaaaagaacaagac 20522349  T
Q  199 ctaatctctacccatttt 216  Q
     |||| ||||||||||||    
T  20522350 ttaatttctacccatttt 20522367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 31055972 - 31056191
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaa-ggaacaaacacaccaa-gatggta-actcagttcggtccaata 97  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||| ||  ||  |||||||| |||||    
T  31055972 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaaggaacaaacacaccaaagattgttgacctagttcggttcaata 31056071  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| ||||||| |||||||||  |||||||||||||||||||||||| |||||| ||||||||| ||||||||||| |||||  ||||||||||||    
T  31056072 tgacctaatctaggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaataaattagcttataagcttacaaaagaacaag 31056171  T
Q  197 acctaatctctacccatttt 216  Q
    ||||||| ||||||||||||    
T  31056172 acctaatttctacccatttt 31056191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 33118066 - 33118283
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| || |  |||||||||||||||||||    
T  33118066 gtgtagagcaacaccacaagcataatcaaagtaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttggctcagttcggtccaatatg 33118165  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| | |  |||||||||||| |||||||||||||| |||||||| | ||||||  |||||||||||||||||||| |||||  || |||||||||||    
T  33118166 acctaatttgggggagagagcagccctccaatccactatgatgaaagagttacaaaatagttacaagaaattagcttataagcttacacaagaacaagac 33118265  T
Q  199 ctaatctctacccatttt 216  Q
     |||| ||||||||||||    
T  33118266 ttaatttctacccatttt 33118283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 10445611 - 10445394
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggtaactc-agttcggtccaatatg 99  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||   || ||||||||||||||||    
T  10445611 gtgtagagcaaaaccacaagcataatcaaagcaataaagataagcaatgaaagagaggaacaaacacaccaagattgttgatccagttcggtccaatatg 10445512  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| |||||||||  |||||||||||||  ||||||||| |||||| ||||||||||||||||||||| || ||  || |||||||||||    
T  10445511 acctaatctgggggagagagcagctctccaatccactattatgaaagtgttacaaaagagttacaagaaattagcttacaatcttacacaagaacaagac 10445412  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  10445411 ctaatttctacccatttt 10445394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 216
Target Start/End: Complemental strand, 33528787 - 33528576
Alignment:
Q  2 tgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatga 100  Q
    ||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| || | || ||||||||||||||||||    
T  33528787 tgtagagcaacaccacaagcataatcaaagcaataaagataaacaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatga 33528688  T
Q  101 cctactctagg-gagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacc 199  Q
    |||| | | ||  ||||||||  |||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||     ||||||||||||    
T  33528687 cctaatatgggaaagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagct-----aagaacaagacc 33528593  T
Q  200 taatctctacccatttt 216  Q
    |||| ||||||||||||    
T  33528592 taatttctacccatttt 33528576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 17865133 - 17865350
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||| || | || |||||| ||| ||||||    
T  17865133 gtgtagagcaacaccacaagcataatcaaagcaataaagataatcaatgaaagaaaggaacaatcacaccaagattgttgacccagttcagtcgaatatg 17865232  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||  |||||||||||  |||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || |||||||||||    
T  17865233 acctaatctgggggagagagcaaccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagac 17865332  T
Q  199 ctaatctctacccatttt 216  Q
     |||| |||||| |||||    
T  17865333 ataatttctacctatttt 17865350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 39482861 - 39483078
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    ||||||| |||||| |||||||||| |||||||||| |||||| |||||||||| |||||||||||||||||||| ||  ||  ||||||||||||||||    
T  39482861 gtgtagaacaacaccacaagcataaccaaagcaataaagataaacaatgaaagagaggaacaaacacaccaagattgttgacctagttcggtccaatatg 39482960  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| | | ||| ||||||||| |||||||||||||| ||||||| || |||||| ||||||||||||||||||||| |||||  || |||||||||||    
T  39482961 acctaatatgggggagagagcaggcctccaatccactatgatgaaaatgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagac 39483060  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  39483061 ctaatttctacccatttt 39483078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 26 - 216
Target Start/End: Original strand, 21629899 - 21630090
Alignment:
Q  26 tcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatgacctactctagggagagagcagtcc 124  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||  || |||||| ||||||||||||||| ||| ||||||||||||  |    
T  21629899 tcaaagcaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcagtccaatatgacctaatctggggagagagcagctc 21629998  T
Q  125 tccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||||| ||| |||||  || ||||||||||| |||| ||||||||||||    
T  21629999 tccaatccactatgatgaaagtgttacaaaagagttacaagaaattagtttataagcttacacaagaacaagacttaatttctacccatttt 21630090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 2869861 - 2869643
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaag-gaacaaacacaccaagatggta-actcagttcggtccaatat 98  Q
    |||||||||||||| | ||||||| ||||||||| | ||||||||||  |||| ||| ||||||||||||||| || ||  || ||||||||||||||||    
T  2869861 gtgtagagcaacaccataagcatattcaaagcaacaaagataagcaaataaaggaagagaacaaacacaccaatattgtttacccagttcggtccaatat 2869762  T
Q  99 gacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaac-aag 196  Q
    |||||||||||||| |||||| ||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| ||     
T  2869761 gacctactctaggggagagagtagctctccaatccactaagatgaaagtgatacaaaggagttacaagaaattagcttaaaagctcac-aaagaacaaaa 2869663  T
Q  197 acctaatctctacccatttt 216  Q
    ||||||| ||||||||||||    
T  2869662 acctaatttctacccatttt 2869643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 34682501 - 34682284
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| |||||||||||||||  |||| | ||||||||||||||| |||||||||||||||||||| ||  || |||||||||||||||||    
T  34682501 gtgtagagcaacaccacaagcataatcaaacaaataaatataagcaatgaaagagaggaacaaacacaccaagattgttgacccagttcggtccaatatg 34682402  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    || || ||| ||| |||||||||  |||||||||||||  ||||||||| |||||| ||||||||||||||||||||| | |||  || |||||||||||    
T  34682401 acataatctgggggagagagcagctctccaatccactataatgaaagtgttacaaaagagttacaagaaattagcttacaggcttacacaagaacaagac 34682302  T
Q  199 ctaatctctacccatttt 216  Q
     |||| ||||||||||||    
T  34682301 ttaatttctacccatttt 34682284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 8039990 - 8040209
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||| ||| ||| ||||| || | || |||||| ||||||||||    
T  8039990 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaggagaggaaaaaatacatcaagattgttgacccagttcagtccaatatg 8040089  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaa--tgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||| |||  ||||||||||||  ||||||||||||| |||||||||| ||||||   ||||||||||||||||||||| |||||  || |||||||||    
T  8040090 acctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagagttacaagaaattagcttacaagcttacacaagaacaag 8040189  T
Q  197 acctaatctctacccatttt 216  Q
    ||||||| ||||||||||||    
T  8040190 acctaatttctacccatttt 8040209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 8390316 - 8390100
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||  | |||||||| |||||||||| ||||||||||||||| || ||  || ||||||||||||| |||    
T  8390316 gtgtagagcaacaccacaagcataatcaaagcacaa-agataagcgatgaaagaaatgaacaaacacaccaaaattgttgacccagttcggtccaaaatg 8390218  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| | | ||| |||||||||  ||||||||||||| |||||||||| || ||| ||||||||||||||||||||| |||||  || |||||||||||    
T  8390217 acctaatttgggggagagagcagctctccaatccactatgatgaaagtgttaaaaaagagttacaagaaattagcttacaagcttgcacaagaacaagac 8390118  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  8390117 ctaatttctacccatttt 8390100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 42 - 216
Target Start/End: Complemental strand, 14699133 - 14698958
Alignment:
Q  42 aagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccactaaga 139  Q
    |||||||||||||||||||||||||||||||||| ||  || |||||||||||||||||||||| ||| ||| ||||||||| |||||||||||||| ||    
T  14699133 aagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatctgggggagagagcagccctccaatccactatga 14699034  T
Q  140 tgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||||| | |||||| ||||||||||||||||||||| |||||  || |||||||||||||||| ||||||||||||    
T  14699033 tgaaag-gttacaaaagagttacaagaaattagcttataagcttacacaagaacaagacctaatttctacccatttt 14698958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 211
Target Start/End: Original strand, 13569262 - 13569470
Alignment:
Q  4 tagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatgacc 102  Q
    ||||| ||||| ||||||||||||||||||  | |||||| |||||||||||||||| ||||||||||| || ||  || ||||||||||||||||||||    
T  13569262 tagagaaacaccacaagcataatcaaagcacaa-agataatcaatgaaagaaaggaataaacacaccaaaattgttgacccagttcggtccaatatgacc 13569360  T
Q  103 tactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagaccta 201  Q
    || ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||||||||||| ||| |  || ||||||||||||||    
T  13569361 taatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagtttacacaagaacaagaccta 13569460  T
Q  202 atctctaccc 211  Q
    || |||||||    
T  13569461 atttctaccc 13569470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 70 - 221
Target Start/End: Original strand, 40014925 - 40015077
Alignment:
Q  70 caagatggtaactcagttcggtccaatatgacctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 168  Q
    |||||||||||| ||||| | ||||||||||| |||||| ||||||||| ||  |||||||||||||||||||||||||||||||||||||| | |||||    
T  40014925 caagatggtaacccagttagatccaatatgacatactctgagggagagaacatccctccaatccactaagatgaaagtgatacaaatgagttgcgagaaa 40015024  T
Q  169 ttagcttaaaagctctcaaaagaacaagacctaatctctacccattttcatgt 221  Q
    ||||||||||| ||| ||||||||||||||||||| ||||| |||||||||||    
T  40015025 ttagcttaaaaactcacaaaagaacaagacctaatttctactcattttcatgt 40015077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 10707418 - 10707205
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    ||||||||||||||| |||||||||||||||||  | |||||||||| |||||||| ||| ||||||||| |||| ||  || |||||||||||||||||    
T  10707418 gtgtagagcaacactgcaagcataatcaaagcacaa-agataagcaaagaaagaaatgaataaacacaccgagattgttgacccagttcggtccaatatg 10707320  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| | | ||| ||||| ||   ||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || |||||||||||    
T  10707319 acctaatatgggggagagaacaactctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagac 10707220  T
Q  199 ctaatctctacccat 213  Q
    ||||| |||||||||    
T  10707219 ctaatttctacccat 10707205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 182
Target Start/End: Complemental strand, 16940372 - 16940193
Alignment:
Q  5 agagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatgacct 103  Q
    ||||| |||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | || || |||||||||||||||| |    
T  16940372 agagcgacaccaaaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccaattcggtccaatatgacat 16940273  T
Q  104 actct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagct 182  Q
    | |||  |||| ||| ||| |||||||||||||| |||||||||| |||||| || |||||||||||||||||| |||||    
T  16940272 aatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagcttataagct 16940193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 182
Target Start/End: Complemental strand, 17011037 - 17010858
Alignment:
Q  5 agagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatgacct 103  Q
    ||||| |||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | || || |||||||||||||||| |    
T  17011037 agagcgacaccaaaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccaattcggtccaatatgacat 17010938  T
Q  104 actct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagct 182  Q
    | |||  |||| ||| ||| |||||||||||||| |||||||||| |||||| || |||||||||||||||||| |||||    
T  17010937 aatctgggggaaagatcagccctccaatccactatgatgaaagtgttacaaaagaattacaagaaattagcttataagct 17010858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 34388789 - 34388997
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||| ||||||||||  | |||||| ||| |||||||||||||||||||||| |||| ||  || || ||||||||||||||    
T  34388789 gtgtagagcaacaccacaagcaaaatcaaagcacaa-agataaacaaagaaagaaaggaacaaacacaccgagattgttgacccaattcggtccaatatg 34388887  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| |||||| ||  ||||||||||||| |||||||||| |||||| |||||||||||||||||||||        || |||||||||||    
T  34388888 acctaatctgggggagagagtagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagctta--------cacaagaacaagac 34388979  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  34388980 ctaatttctacccatttt 34388997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 23078638 - 23078422
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaa---gatggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||||||||||||||||  | |||||||||||||||||| ||||||||||||||||    ||| | || ||||||| |||||||    
T  23078638 gtgtagagcaacaccacaagcataatcaaagcacaa-agataagcaatgaaagaatggaacaaacacaccaaaagaatgttgacccagttcgatccaata 23078540  T
Q  98 tgacctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| | |  |||||||| ||   ||||||||||||| |||||||||| || ||| ||||||||||||| ||||||  |||||  || |||||||||    
T  23078539 tgacctaatatgggggagagaacaactctccaatccactatgatgaaagtgttagaaa-gagttacaagaaaatagcttgcaagcttacacaagaacaag 23078441  T
Q  197 acctaatctctacccattt 215  Q
    || |||| |||||||||||    
T  23078440 acttaatttctacccattt 23078422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 28259344 - 28259129
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||  ||||| || | |||||||||||||||||| | |||||||||||||| |   || | || |||||||||||||||    
T  28259344 gtgtagagcaacaccacaagcatatacaaag-aacaaagataagcaatgaaagaa-gaaacaaacacaccaaaagattgttgacccagttcggtccaata 28259247  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| | | ||| |||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||| ||||||  |||||  || |||||||||    
T  28259246 tgacctaatttgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgcaagcttacacaagaacaag 28259148  T
Q  197 acctaatctctacccattt 215  Q
    | ||||| |||||||||||    
T  28259147 atctaatttctacccattt 28259129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 42039837 - 42039619
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaa--gatggtaactc-agttcggtccaata 97  Q
    |||||||||||||| |||||||||| |||||||  | |||||||||||||||||||||| ||| ||||||||  ||| ||   || ||||||||||||||    
T  42039837 gtgtagagcaacaccacaagcataaacaaagcacaa-agataagcaatgaaagaaaggagcaagcacaccaaaagattgttgatctagttcggtccaata 42039739  T
Q  98 tgacctactcta-gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaa-ttagcttaaaagctctcaaaagaacaa 195  Q
    ||||||| |||  ||||||||||||  ||| ||||||||| |||||||||| ||| || ||||||||||||| |||||||  |||||  || || |||||    
T  42039738 tgacctaatctgtgggagagagcagctctctaatccactatgatgaaagtgttacgaa-gagttacaagaaaattagcttgcaagcttacacaaaaacaa 42039640  T
Q  196 gacctaatctctacccatttt 216  Q
    |||||||| ||||||||||||    
T  42039639 gacctaatttctacccatttt 42039619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 2838114 - 2838024
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattag 172  Q
    |||||||||||||||||||||||||| ||| ||||||||   |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2838114 cagttcggtccaatatgacctactctgggggagagagcacatctccaatccactaaaatgaaagtgatacaaatgagttacaagaaattag 2838024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 59 - 216
Target Start/End: Complemental strand, 15903997 - 15903841
Alignment:
Q  59 aacaaacacaccaagatggtaactcagttcggtccaatatgacctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatga 157  Q
    |||||| ||||||||||||||||  |||||| |||||||||||||||||| | |||||||| |   ||||||||||||||||| ||||||||||||| |     
T  15903997 aacaaatacaccaagatggtaacctagttcgatccaatatgacctactctgacggagagagaaaatctccaatccactaagataaaagtgatacaaaggg 15903898  T
Q  158 gttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    ||||||||||| ||||||| |||||| | |||||||||   ||||| ||||||||||||    
T  15903897 gttacaagaaa-tagcttacaagctcac-aaagaacaaattctaatttctacccatttt 15903841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 36757930 - 36757714
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||| |||||||  | ||||||||||||||||||||||||||||||||||| |   || | || || ||||||||||||    
T  36757930 gtgtagagcaacaccacaagcataaacaaagcacaa-agataagcaatgaaagaaaggaacaaacacaccaaaagattgttgacccaattcggtccaata 36757832  T
Q  98 tgacctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| |||  ||| || | |||  |||||||||| || |||||||||| | |||| |||||| ||||||  |||||  |||||  || ||||||||     
T  36757831 tgacctaatctgggggggataacagctctccaatccagtatgatgaaagtgtttcaaa-gagttataagaaaaaagctttcaagcttacacaagaacaaa 36757733  T
Q  197 acctaatctctacccattt 215  Q
    ||||||| |||||||||||    
T  36757732 acctaatttctacccattt 36757714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 173
Target Start/End: Complemental strand, 1345652 - 1345533
Alignment:
Q  59 aacaaacacaccaaga---tggtaactcagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccact-aagatgaaagtgatacaa 153  Q
    ||||||||||||||||   || | || |||||||||||||||||||||||||| ||| ||||||||   |||| ||||||| ||||||||||||||||||    
T  1345652 aacaaacacaccaagaaattgttgacccagttcggtccaatatgacctactctgggggagagagcacctctccgatccacttaagatgaaagtgatacaa 1345553  T
Q  154 atgagttacaagaaattagc 173  Q
    ||||||| ||||||||||||    
T  1345552 atgagttgcaagaaattagc 1345533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 198
Target Start/End: Complemental strand, 27149402 - 27149263
Alignment:
Q  59 aacaaacacaccaaga-tggtaactcagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatg 156  Q
    ||||||||||| |||| |||||||  |||| |||||||||||||||||| | ||| |||||||||  |||||||||||||  |||||||||||||||| |    
T  27149402 aacaaacacac-aagactggtaaccaagtttggtccaatatgacctactatgggggagagagcagctctccaatccactataatgaaagtgatacaaagg 27149304  T
Q  157 agttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
     || ||||||||||| ||||||||||| | ||||||||||||    
T  27149303 ggtaacaagaaattaccttaaaagctcac-aaagaacaagac 27149263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 180
Target Start/End: Original strand, 35397445 - 35397622
Alignment:
Q  5 agagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatgacct 103  Q
    ||||||| || ||||||||||||||||||||  | |||||||||||||||| | |||||||||||||| | || | || ||||||||| |||| | ||||    
T  35397445 agagcaaaaccacaagcataatcaaagcaatcaatataagcaatgaaagaaggaaacaaacacaccaatattgtttacccagttcggttcaatctaacct 35397544  T
Q  104 ac-tctag-ggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaag 180  Q
    || ||| | ||||| |||||  || |||||||||||||||||||||||| |||   ||||| | |||||||||||||||    
T  35397545 acatctggaggagatagcagctcttcaatccactaagatgaaagtgatataaagaggttacga-aaattagcttaaaag 35397622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 40738774 - 40738926
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||||| |  |||||||||| |||||||| | ||||| ||| |||||||||||||| |   || | || |||||| | ||||||    
T  40738774 gtgtagagcaacaccacaagcaaatacaaagcaataaagataagcta-gaaaggaag-aacaaacacaccaaaagattgttgacccagttcag-ccaata 40738870  T
Q  98 tgacctactctagggagagagcagtcctccaatccactaagatgaaagtgatacaa 153  Q
    ||||||| ||| ||| ||||||||  ||||||||||||| |||||||||| |||||    
T  40738871 tgacctaatctggggggagagcagctctccaatccactatgatgaaagtgttacaa 40738926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 215
Target Start/End: Original strand, 25398517 - 25398641
Alignment:
Q  92 ccaatatgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaa 189  Q
    ||||||||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||  || ||    
T  25398517 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaaaatagcttgcaagcttacacaa 25398615  T
Q  190 gaacaagacctaatctctacccattt 215  Q
    ||||||| |||| | |||||||||||    
T  25398616 gaacaagtcctagtttctacccattt 25398641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 215
Target Start/End: Original strand, 25403655 - 25403779
Alignment:
Q  92 ccaatatgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaa 189  Q
    ||||||||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||  || ||    
T  25403655 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaaaatagcttgcaagcttacacaa 25403753  T
Q  190 gaacaagacctaatctctacccattt 215  Q
    ||||||| |||| | |||||||||||    
T  25403754 gaacaagtcctagtttctacccattt 25403779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 3491791 - 3491896
Alignment:
Q  110 gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaagacctaatctcta 208  Q
    ||||||||||||  ||||||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||  || ||||||||||||||   ||||    
T  3491791 gggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaaaatagcttgcaagcttacacaagaacaagacctagattcta 3491889  T
Q  209 cccattt 215  Q
    |||||||    
T  3491890 cccattt 3491896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 11151671 - 11151746
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    ||||||||||||||| ||||||||||||||||||||  |||||| | ||||||||| | ||||| |||||||||||||    
T  11151671 aaagtgatacaaatgggttacaagaaattagcttaaacaagctcac-aaagaacaa-atctaatttctacccattttc 11151746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 11690589 - 11690514
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||| ||||||||||||||||||||  |||||| | ||||||||| ||||||| |||||||||||||    
T  11690589 aaagggatacaaatgggttacaagaaattagcttaaacaagctcac-aaagaacaa-acctaatttctacccattttc 11690514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 25407663 - 25407768
Alignment:
Q  110 gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaagacctaatctcta 208  Q
    ||||||||||||  ||||||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||  || ||||||||| |||| | ||||    
T  25407663 gggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaaaatagcttgcaagcttacacaagaacaagtcctagtttcta 25407761  T
Q  209 cccattt 215  Q
    |||||||    
T  25407762 cccattt 25407768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 42362440 - 42362365
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||| ||||||||||||||||||||  |||||| | ||||||||| ||||||| |||||||||||||    
T  42362440 aaagggatacaaatgggttacaagaaattagcttaaacaagctcac-aaagaacaa-acctaatttctacccattttc 42362365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 14699161 - 14699127
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaat 35  Q
    |||||||||||||| ||||||||||||||||||||    
T  14699161 gtgtagagcaacaccacaagcataatcaaagcaat 14699127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 35215595 - 35215649
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  35215595 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 35215649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 35217972 - 35218026
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  35217972 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 35218026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 212
Target Start/End: Original strand, 723824 - 723894
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctaccca 212  Q
    |||| |||||||||| ||||||||||||||||||||  |||||| | ||||||||| ||||||| ||||||||    
T  723824 aaagggatacaaatgggttacaagaaattagcttaaacaagctcac-aaagaacaa-acctaatttctaccca 723894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 14633906 - 14633980
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||| |||||||||| ||||||||||||||||||||  |||||| | |||||||||  |||||| ||||||||||||    
T  14633906 aaagggatacaaatgggttacaagaaattagcttaaacaagctcac-aaagaacaa-tcctaatttctacccatttt 14633980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 28770781 - 28770725
Alignment:
Q  159 ttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    ||||||||||||||||||||||||| | |||||||||   ||||| ||||||||||||    
T  28770781 ttacaagaaattagcttaaaagctcac-aaagaacaaactctaatttctacccatttt 28770725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 36773650 - 36773617
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  36773650 aaagagatacaaatgagttacaagaaattagctt 36773617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 42453026 - 42452973
Alignment:
Q  83 cagttcggtccaatatgacctactctagggagagagcagtcctccaatccacta 136  Q
    |||||||||||||  ||||||| ||| |||||||||||| ||||| ||||||||    
T  42453026 cagttcggtccaaattgacctagtctggggagagagcagccctccgatccacta 42452973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 6e-61; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 23799729 - 23799527
Alignment:
Q  16 acaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatgacctactctag-gga 113  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||  || |||||||||||||||||||||| | | | |||    
T  23799729 acaaacataatcaaagcaatagagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatgacctaatttggagga 23799630  T
Q  114 gagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccat 213  Q
    |||||||| |||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  || |||||||||||||||| |||||||||    
T  23799629 gagagcagccctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttacaagcttacacaagaacaagacctaatttctacccat 23799530  T
Q  214 ttt 216  Q
    |||    
T  23799529 ttt 23799527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 26403397 - 26403180
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||   |||||||||||||||||||| ||  || |||||||||||||||||    
T  26403397 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaaacgaggaacaaacacaccaagattgttgacccagttcggtccaatatg 26403298  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| |||||| | |||||||||||| |||||  || |||||||||||    
T  26403297 acctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaaagagttataggaaattagcttacaagcttgcacaagaacaagac 26403198  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  26403197 ctaatttctacccatttt 26403180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 6127150 - 6127368
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga--tggtaactcagttcggtccaatat 98  Q
    |||||||||||||| |||||||||||||||||| || ||||||||||||||||| | ||||||||||| |||    || | |||||||||||||||||||    
T  6127150 gtgtagagcaacaccacaagcataatcaaagcactaaagataagcaatgaaagagatgaacaaacacatcaaatattgttgactcagttcggtccaatat 6127249  T
Q  99 gacctactctaggga-gagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
    |||||| | | |||| ||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||  |||||||||||||    
T  6127250 gacctaatttggggaagagagcagctctccaatccactatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacaaaagaacaaga 6127349  T
Q  198 cctaatctctacccatttt 216  Q
    |||||| ||||||||||||    
T  6127350 cctaatttctacccatttt 6127368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 19752561 - 19752344
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||| || | ||  ||||||||||||||||    
T  19752561 gtgtagtgcaacaccacaagcataatcaaagcaatagagataagtaatgaaagagaggaacaaacacaccaagattgttgacctagttcggtccaatatg 19752462  T
Q  100 acctactcta-gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaaga 197  Q
    ||||| |||| ||||||||||||  |||||||||||||||||||||||| ||| ||||||||||||| ||| ||||||  |||||  || |||||||||     
T  19752461 acctagtctaggggagagagcagctctccaatccactaagatgaaagtgttac-aatgagttacaagaaaaatagcttgcaagcttacacaagaacaagt 19752363  T
Q  198 cctaatctctacccatttt 216  Q
    |||||| ||||||||||||    
T  19752362 cctaatttctacccatttt 19752344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 5702650 - 5702433
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||| ||| ||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| ||  || |||||||||||||||||    
T  5702650 gtgtagagcatcaccacaagcataattaaagcaatagagataagctatgaaggaaaggaacaaacacaccaagattgttgacccagttcggtccaatatg 5702551  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| | | ||| ||||||||  |||||||||| ||| |||||||||| |||||| ||||||||||||||||||||| |||||  || |||| ||| ||    
T  5702550 acctaatatgggggagagagcatccctccaatcccctatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagagcaaaac 5702451  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  5702450 ctaatttctacccatttt 5702433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 6813612 - 6813830
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacacc-aaga-tggtaactcagttcggtccaatat 98  Q
    ||||||| |||||  ||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| |||| || |||| ||||||||||||||||    
T  6813612 gtgtagaacaacatcacaagcataatcaaagcaataaagataagaaatgaaagaaaggaacaaacataccaaagattgttaacccagttcggtccaatat 6813711  T
Q  99 gacctactcta-gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaaga 197  Q
     |||||| ||| ||||||||||||  |||||||||| |||||||||||||| ||||| | ||||||||||||||||||  |||||| | ||||||||| |    
T  6813712 aacctacactaggggagagagcagctctccaatccaataagatgaaagtgacacaaaggggttacaagaaattagcttgcaagctcac-aaagaacaaaa 6813810  T
Q  198 cctaa-tctctacccatttt 216  Q
    ||||| | ||||||||||||    
T  6813811 cctaattttctacccatttt 6813830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 4696763 - 4696557
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||||||||| |||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || | || ||||||| |||||||||    
T  4696763 gtgtagagcaacaccacaaacataatcaaagcaataaagataagcaatgaaagaaatgaacaaacacaccaagattgttgacccagttcgatccaatatg 4696664  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||  |||||||||||| |||||||||||||| |||||||           ||||||||||||||||||||| |||||  |  |||||||||||    
T  4696663 acctaatctgggggagagagcagccctccaatccactatgatgaaa-----------gagttacaagaaattagcttataagcttacgcaagaacaagac 4696575  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  4696574 ctaatttctacccatttt 4696557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 4455957 - 4456173
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||| |||||||  | ||||||||||||||||||||||||||||||||||| |   || | || | |||||||||||||    
T  4455957 gtgtagagcaacacaacaagcataaacaaagcacaa-agataagcaatgaaagaaaggaacaaacacaccaaaagattgctgacccggttcggtccaata 4456055  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    || |||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||| |||||   |||||  || |||||||||    
T  4456056 tggcctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagctggcaagcttacacaagaacaag 4456154  T
Q  197 acctaatctctacccattt 215  Q
    || |||| |||||||||||    
T  4456155 acataatttctacccattt 4456173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 216
Target Start/End: Complemental strand, 9054995 - 9054788
Alignment:
Q  10 aacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatgacctactct 108  Q
    ||||| ||||| ||||||||||||||| |||||||  |||||||||   | |||||||||||| ||  |  |||| |||| |||||||||||||||||||    
T  9054995 aacaccacaagtataatcaaagcaataaagataagtcatgaaagaagcaatcaaacacaccaatattatttactctgttcagtccaatatgacctactct 9054896  T
Q  109 ag-ggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctct 207  Q
     | |||||||||||  ||| |||||||||||||||||||||||||||   |||||||||||||||||||||||| | | ||||||||| | ||||| |||    
T  9054895 ggaggagagagcagctctctaatccactaagatgaaagtgatacaaagtggttacaagaaattagcttaaaagcgcac-aaagaacaaaatctaatttct 9054797  T
Q  208 acccatttt 216  Q
    |||||||||    
T  9054796 acccatttt 9054788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 7412270 - 7412486
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga----tggtaactcagttcggtccaat 96  Q
    |||||||||||||| |||||||||  ||||| || | |||||||||||||||||| ||||||||||||||| ||    || | || ||||||||||||||    
T  7412270 gtgtagagcaacaccacaagcatatacaaag-aacaaagataagcaatgaaagaa-ggaacaaacacaccatgaaaattgttgacccagttcggtccaat 7412367  T
Q  97 atgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaa 195  Q
    |||||||| | | ||| |||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||| || |||  |||||  || ||||||||    
T  7412368 atgacctaatatgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaataacttgcaagcttacacaagaacaa 7412466  T
Q  196 gacctaatctctacccattt 215  Q
    |||||||| |||||||||||    
T  7412467 gacctaatttctacccattt 7412486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 9765987 - 9765849
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaa-ga-tggtaactcagttcggtccaatat 98  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| || || | || ||||||||||||||||    
T  9765987 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagaagggaacaaacacaccaatgattgttgacccagttcggtccaatat 9765888  T
Q  99 gacctactct-agggagagagcagtcctccaatccacta 136  Q
    |||||| |||  ||||||||||||  |||||||||||||    
T  9765887 gacctaatctgggggagagagcagctctccaatccacta 9765849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 216
Target Start/End: Original strand, 3051097 - 3051266
Alignment:
Q  49 gaaagaaaggaacaaacacaccaa-gatg-gtaactcagttcggtccaatatgacctactctag-ggagagagcagtcctccaatccactaagatgaaag 145  Q
    ||||||||  |||||||||||||| |||  ||||| || ||||||| ||||| |||| |||| | ||||||||||   ||||||||||||||||||||||    
T  3051097 gaaagaaaacaacaaacacaccaaagattagtaacccaattcggtctaatataacctcctctggaggagagagcacctctccaatccactaagatgaaag 3051196  T
Q  146 tgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||||||||||||||||||||||||||| ||| ||||| | ||||||||| || |||| ||||||||||||    
T  3051197 tgatacaaatgagttacaagaaattagcataagagctcac-aaagaacaaaacttaatttctacccatttt 3051266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 28307507 - 28307707
Alignment:
Q  16 acaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagat-ggtaactcagttcggtccaatatgacctactctaggga- 113  Q
    |||||||||| |||||||||| | ||||| || | ||||| | || |||||| ||||||| |||||| ||||||||||||| |||||||||||| ||||     
T  28307507 acaagcataaacaaagcaataaatataagaaa-gcaagaatgaaataaacacgccaagattggtaacccagttcggtccaaaatgacctactctggggat 28307605  T
Q  114 gagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattag-cttaaaagctctcaaaagaacaagacctaatctctaccca 212  Q
    ||||||||  |||||||||||||||||| |||| ||||| ||| |||||||||||||||  ||||||||||   ||||||||||||||| | ||||| ||    
T  28307606 gagagcagctctccaatccactaagatggaagtaatacacatgggttacaagaaattagttttaaaagctc-ataaagaacaagacctactttctacaca 28307704  T
Q  213 ttt 215  Q
    |||    
T  28307705 ttt 28307707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 19175922 - 19175753
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||| |||||||  | |||||||||||||||||||||||||||||||| || |   || | ||  ||||||||||||||    
T  19175922 gtgtagagcaacaccacaagcataaacaaagcacaa-agataagcaatgaaagaaaggaacaaacacacaaaaagattgttgacctagttcggtccaata 19175824  T
Q  98 tgacctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 168  Q
    ||||||| |||  |||||||||||   ||||||||||||| |||||||||| |||||| |||||||||||||    
T  19175823 tgacctaatctgggggagagagcaactctccaatccactatgatgaaagtgttacaaa-gagttacaagaaa 19175753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 31071397 - 31071180
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga----tggtaactcagttcggtccaat 96  Q
    |||||||||||||| ||||||| |  ||||||||   |||||||||| ||||| ||| |||||||||||||| |    || | ||  |||||||||||||    
T  31071397 gtgtagagcaacaccacaagcaaatacaaagcaaccaagataagcaa-gaaaggaag-aacaaacacaccaaaaagattgttgaccgagttcggtccaat 31071300  T
Q  97 atgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaaca 194  Q
    |||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| | |||||||| ||| ||||||  |||||  || |||||||    
T  31071299 atgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaaaatagcttgcaagcttacacaagaaca 31071201  T
Q  195 agacctaatctctacccattt 215  Q
    || |||| | |||||||||||    
T  31071200 agtcctagtttctacccattt 31071180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 30291695 - 30291619
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    ||||||||||||||||||||||||||||||||||  | |||||| | ||||||||| ||||||| |||||||||||||    
T  30291695 aaagtgatacaaatgagttacaagaaattagcttcaacaagctcac-aaagaacaaaacctaatttctacccattttc 30291619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 5990594 - 5990539
Alignment:
Q  133 actaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaa 188  Q
    ||||||||||||||||||||||   |||||||||||||||||||||||||| ||||    
T  5990594 actaagatgaaagtgatacaaagatgttacaagaaattagcttaaaagctcacaaa 5990539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 7493212 - 7493130
Alignment:
Q  127 caatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacc 210  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||| | ||||||||| | | ||||||| ||||||| ||||||    
T  7493212 caatccactaagatgaaagtgatacaaagaagttataagaaattaacataaaagctcac-acagaacaaaacctaatttctacc 7493130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 168
Target Start/End: Complemental strand, 1262029 - 1261953
Alignment:
Q  92 ccaatatgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 168  Q
    ||||||||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| | |||||||||||    
T  1262029 ccaatatgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 1261953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 218
Target Start/End: Complemental strand, 18141908 - 18141833
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttca 218  Q
    ||||||||||||||| ||||||||||||||||||  | |||||| | ||||||||  ||||||| ||||||||||||||    
T  18141908 aaagtgatacaaatgggttacaagaaattagcttcaacaagctcac-aaagaaca--acctaatttctacccattttca 18141833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 1292543 - 1292618
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||||||||||||||||||||||  | |||||| | ||||||||| || |||| |||||||||||||    
T  1292543 aaagagatacaaatgagttacaagaaattagcttcaacaagctcac-aaagaacaa-acttaatttctacccattttc 1292618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 3303750 - 3303825
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||||||||||||||||||| ||||  |||||| | ||||||||| || |||| |||||||||||||    
T  3303750 aaagagatacaaatgagttacaagaaattaggttaaacaagctcac-aaagaacaa-acttaatttctacccattttc 3303825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 178
Target Start/End: Complemental strand, 3772274 - 3772244
Alignment:
Q  148 atacaaatgagttacaagaaattagcttaaa 178  Q
    |||||||||||||||||||||||||||||||    
T  3772274 atacaaatgagttacaagaaattagcttaaa 3772244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 4162585 - 4162510
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt--aaaagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    |||| |||||||||||||||||||||||||||||  | ||| |||| ||||||||| ||||||  |||||||||||||    
T  4162585 aaagagatacaaatgagttacaagaaattagcttcaacaagttctc-aaagaacaa-acctaacttctacccattttc 4162510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 43079928 - 43079874
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  43079928 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 43079874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 43082299 - 43082245
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  43082299 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 43082245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 10015169 - 10015136
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  10015169 aaagagatacaaatgagttacaagaaattagctt 10015136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 11384073 - 11384040
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  11384073 aaagagatacaaatgagttacaagaaattagctt 11384040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 28283230 - 28283283
Alignment:
Q  83 cagttcggtccaatatgacctactctagggagagagcagtcctccaatccacta 136  Q
    |||||||||||||  ||||||| ||| |||||||||||| ||||| ||||||||    
T  28283230 cagttcggtccaaattgacctagtctggggagagagcagccctccgatccacta 28283283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 6599054 - 6598985
Alignment:
Q  148 atacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    ||||||||| ||||||||||||||||||||  |||||| | ||||||||| || |||| |||||||||||||    
T  6599054 atacaaatgggttacaagaaattagcttaaacaagctcgc-aaagaacaa-acttaatttctacccattttc 6598985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 6674507 - 6674438
Alignment:
Q  148 atacaaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    ||||||||| ||||||||||||||||||||  |||||| | ||||||||| || |||| |||||||||||||    
T  6674507 atacaaatgggttacaagaaattagcttaaacaagctcgc-aaagaacaa-acttaatttctacccattttc 6674438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 175
Target Start/End: Original strand, 18106163 - 18106191
Alignment:
Q  147 gatacaaatgagttacaagaaattagctt 175  Q
    |||||||||||||||||||||||||||||    
T  18106163 gatacaaatgagttacaagaaattagctt 18106191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 40328857 - 40328792
Alignment:
Q  152 aaatgagttacaagaaattagcttaa--aagctctcaaaagaacaagacctaatctctacccattttc 217  Q
    ||||||||||||||||||||| ||||  |||||| | ||||||||| ||||||| |||||||||||||    
T  40328857 aaatgagttacaagaaattagtttaaacaagctcac-aaagaacaa-acctaatttctacccattttc 40328792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 41364927 - 41364963
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagcttaaa 178  Q
    |||| |||||||||| |||||||||||||||||||||    
T  41364927 aaagggatacaaatgtgttacaagaaattagcttaaa 41364963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 118; Significance: 2e-60; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 5613 - 5830
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | || |||||||||||||||||    
T  5613 gtgtagagaaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcggtccaatatg 5712  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||  |||||||||||| ||| |||||||||| |||||||||| |||||| ||| ||||||||||||||||| |||||  || |||||||||||    
T  5713 acctaatctgggggagagagcagcccttcaatccactatgatgaaagtgttacaaaagagatacaagaaattagcttataagcttacacaagaacaagac 5812  T
Q  199 ctaatctctacccatttt 216  Q
     |||| ||||| ||||||    
T  5813 ttaatttctactcatttt 5830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 2422 - 2639
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga-tggtaactcagttcggtccaatatg 99  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | || ||||||| |||||||||    
T  2422 gtgtagaacaacaccacaagcataatcaaagcaataaagataagcaatgaaagaaaggaacaaacacaccaagattgttgacccagttcgctccaatatg 2521  T
Q  100 acctactct-agggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| |||  |||||| ||||| |||||||||||||| |||||||||| |||||| || ||| |||||||||||||| |||||  || ||||||||||     
T  2522 acctaatctgggggagacagcagccctccaatccactatgatgaaagtgttacaaaagaattataagaaattagcttataagcttacacaagaacaagaa 2621  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  2622 ctaatttctacccatttt 2639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 133445 - 133231
Alignment:
Q  4 tagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaatatga 100  Q
    ||||||||||  |||||||||  |||||||||| ||||||| |||||||||| |||||||||||||||| |   || | || ||||| ||| ||||||||    
T  133445 tagagcaacatcacaagcatatacaaagcaataaagataagtaatgaaagaa-ggaacaaacacaccaaaagattgttgacccagttaggttcaatatga 133347  T
Q  101 cctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaat-tagcttaaaagctctcaaaagaacaagac 198  Q
    |||| | | ||| |||||||||  ||||||||||||| ||||||| || |||||| |||||||||||||  ||||||  || ||  || |||||||||||    
T  133346 cctaatatgggggagagagcagctctccaatccactatgatgaaaatgttacaaa-gagttacaagaaaaatagcttgcaaacttacacaagaacaagac 133248  T
Q  199 ctaatctctacccattt 215  Q
    ||||| |||||||||||    
T  133247 ctaatttctacccattt 133231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 10659 - 10868
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  |  || |||||||||||||||||    
T  10659 gtgtagagcaacaccacaagcataatcaaagcaataaagataagcaatgaaagagaggaacaaacacaccaagattattgacccagttcggtccaatatg 10758  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| | | ||| |||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||| ||| |||||  || |||||||||||    
T  10759 acctaatttgggggagagagcagctctccaatccactaagatgaaagtgttacaaaagagttacaagaaattagtttacaagcttacacaagaacaagac 10858  T
Q  199 ctaatctcta 208  Q
    ||||| ||||    
T  10859 ctaatttcta 10868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 216
Target Start/End: Original strand, 17196 - 17410
Alignment:
Q  4 tagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatgacc 102  Q
    ||||||||||| ||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||| || ||  || ||||||||| ||||||||||    
T  17196 tagagcaacaccacaagcataattaaagcaataaagataagaaatgaaagaaaggagcaaacacaccaaaattgttgacccagttcggttcaatatgacc 17295  T
Q  103 tactctaggga-gagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagaccta 201  Q
    || | | || | |||||||  ||||||||||| || |||||||||| |||||| ||||||||||||||||||||| |||||  || ||||||||||||||    
T  17296 taatatgggaaagagagcaaccctccaatccattatgatgaaagtgttacaaaagagttacaagaaattagcttataagcttacacaagaacaagaccta 17395  T
Q  202 atctctacccatttt 216  Q
    || |||||| |||||    
T  17396 atttctacctatttt 17410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 18083 - 18116
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  18083 aaagagatacaaatgagttacaagaaattagctt 18116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 85614 - 85829
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaagatggta-actcagttcggtccaatatg 99  Q
    |||||||||||||  |||||||||| |||||||  | ||||||||||||||||||| ||||||||||| | |||| ||  || |||||| ||||||||||    
T  85614 gtgtagagcaacatcacaagcataaccaaagcacaa-agataagcaatgaaagaaaagaacaaacacatctagattgttgacccagttcagtccaatatg 85712  T
Q  100 acctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagac 198  Q
    ||||| ||| ||| ||||||| |  ||||||||||| | |||||||||| |||||| |||||||||||||||||||||||||||  || |||| ||||||    
T  85713 acctaatctgggggagagagcggctctccaatccaccatgatgaaagtgttacaaa-gagttacaagaaattagcttaaaagcttacacaagagcaagac 85811  T
Q  199 ctaatctctacccatttt 216  Q
    ||||| ||||||||||||    
T  85812 ctaatttctacccatttt 85829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 44128 - 43913
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||||||||| ||||| || | |||||||||||||||||| |||||||||||||||| |   || | || |||||||||||||||    
T  44128 gtgtagagcaacaccacaagcataaacaaag-aacaaagataagcaatgaaagaa-ggaacaaacacaccaaaagattgttgacccagttcggtccaata 44031  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||| ||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||| ||||||  |||||   | |||||||||    
T  44030 tgatctattctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgcaagcttatacaagaacaag 43932  T
Q  197 acctaatctctacccattt 215  Q
    ||||||| |||||||||||    
T  43931 acctaatttctacccattt 43913  T

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Target: scaffold0087; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 37000 - 36784
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    ||||||| |||||| ||||| |||| |||||||  | ||||||||||| ||||||||||||||||||||||| |   || | || |||||||||||||||    
T  37000 gtgtagaccaacaccacaagtataaacaaagcacaa-agataagcaataaaagaaaggaacaaacacaccaaaagattgttgacccagttcggtccaata 36902  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaag 196  Q
    ||||||| ||||||| |||||||||  | |||| |||||| |||||||||| |||||| ||||||||||||| ||||||  |||||  || |||||||||    
T  36901 tgacctaatctagggaagagagcagctcgccaacccactatgatgaaagtgttacaaa-gagttacaagaaaatagcttgcaagcttacacaagaacaag 36803  T
Q  197 acctaatctctacccattt 215  Q
    || | || |||||||||||    
T  36802 acatgatttctacccattt 36784  T

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Target: scaffold0140 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 8587 - 8376
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| ||||| |||| |||| ||||| |||||||||||||||||| | |||||||||||||| |   || | || |||||||||||||||    
T  8587 gtgtagagcaacaccacaagtataaccaaaacaataaagataagcaatgaaagaa-gaaacaaacacaccaaaagattgttgacccagttcggtccaata 8489  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaag-aaattagcttaaaagctctcaaaagaacaa 195  Q
    ||||||| ||| ||| |||||||||  ||||||||||||| |||||||||| |||||| |||||||||| ||| ||||||  |||||  || ||||||||    
T  8488 tgacctaatctgggggagagagcagctctccaatccactatgatgaaagtgttacaaa-gagttacaagaaaaatagcttgcaagcttacacaagaacaa 8390  T
Q  196 gacctaatctctac 209  Q
    |||||||| |||||    
T  8389 gacctaatttctac 8376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 59 - 221
Target Start/End: Original strand, 23518 - 23683
Alignment:
Q  59 aacaaacacaccaagatggtaactcagttcggtccaatatgacctactcta-gggagagagcagtcctccaatccactaagatgaaagtgatacaaa--- 154  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||| || |||||| || ||   |||||| |||||||||||||||||||||||       
T  23518 aacaaaca-accaagatggtaacctagttcggtccaatatgacctactttaggggagaaagaagctatccaattcactaagatgaaagtgatacaaatag 23616  T
Q  155 -tgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccattttcatgt 221  Q
     | | ||||||||||||  |||| |||||| ||||| ||||||| ||||| |||||||||||||||||    
T  23617 gttaattacaagaaattttcttagaagctcacaaaa-aacaagatctaatttctacccattttcatgt 23683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 43274 - 43338
Alignment:
Q  90 gtccaatatgacctactctag-ggagagagcagtcctccaatccactaagatgaaagtgatacaa 153  Q
    ||||||||||||||||||||| ||||||| || | ||| ||||||||||||||||||||||||||    
T  43274 gtccaatatgacctactctagaggagagaacaattctctaatccactaagatgaaagtgatacaa 43338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 45183 - 45329
Alignment:
Q  1 gtgtagagcaacactacaagcataatcaaagcaatatagataagcaatgaaagaaaggaacaaacacaccaaga---tggtaactcagttcggtccaata 97  Q
    |||||||||||||| |||| ||||  ||||| || | |||||||||||||||||| | |||||||||||||| |   || | |||||||||||| |||||    
T  45183 gtgtagagcaacaccacaaacatatacaaag-aacaaagataagcaatgaaagaatg-aacaaacacaccaaaagattgttgactcagttcggttcaata 45280  T
Q  98 tgacctactctaggg-agagagcagtcctccaatccactaagatgaaag 145  Q
    ||||||| ||| ||| |||||||||  ||||||||||||| ||||||||    
T  45281 tgacctaatctgggggagagagcagctctccaatccactatgatgaaag 45329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 29570 - 29506
Alignment:
Q  90 gtccaatatgacctactctag-ggagagagcagtcctccaatccactaagatgaaagtgatacaa 153  Q
    ||||||||||||||||||||| ||||||| || | ||| ||||||||||||||||||||||||||    
T  29570 gtccaatatgacctactctagaggagagaacaattctctaatccactaagatgaaagtgatacaa 29506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 102516 - 102445
Alignment:
Q  144 agtgatacaaatgagttacaagaaattagcttaaaagctctcaaaagaacaagacctaatctctacccatttt 216  Q
    |||||||||||   |||||||||||||| ||||||||||| ||||| |||||  |||||| ||||||||||||    
T  102516 agtgatacaaagaggttacaagaaattatcttaaaagctcacaaaa-aacaaaccctaatttctacccatttt 102445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 320 - 266
Alignment:
Q  83 cagttcggtccaatatgacctactctaggg-agagagcagtcctccaatccacta 136  Q
    |||||||||||||| ||||||| ||| ||| ||||||||| ||||||||||||||    
T  320 cagttcggtccaatctgacctagtctgggggagagagcagccctccaatccacta 266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 18008 - 17951
Alignment:
Q  110 gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 168  Q
    ||||||||||||  ||||||||||||| |||||||||| |||||| | |||||||||||    
T  18008 gggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 17951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 24101 - 24044
Alignment:
Q  110 gggagagagcagtcctccaatccactaagatgaaagtgatacaaatgagttacaagaaa 168  Q
    ||||||||||||  ||||||||||||| |||||||||| |||||| | |||||||||||    
T  24101 gggagagagcagctctccaatccactatgatgaaagtgttacaaa-gggttacaagaaa 24044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 6481 - 6424
Alignment:
Q  80 actcagttcggtccaatatgacctactct-agggagagagcagtcctccaatccacta 136  Q
    ||||||||||||||||| ||||||| |||  |||||||||||| ||||| ||||||||    
T  6481 actcagttcggtccaatctgacctagtctgggggagagagcagccctccgatccacta 6424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 11645 - 11612
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  11645 aaagagatacaaatgagttacaagaaattagctt 11612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 175
Target Start/End: Original strand, 27523 - 27556
Alignment:
Q  142 aaagtgatacaaatgagttacaagaaattagctt 175  Q
    |||| |||||||||||||||||||||||||||||    
T  27523 aaagagatacaaatgagttacaagaaattagctt 27556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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