View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3644_low_15 (Length: 241)
Name: NF3644_low_15
Description: NF3644
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3644_low_15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 3464677 - 3464453
Alignment:
| Q |
17 |
caagtgtaacctaaaacatgaatgtattccagcactgaatgaagaaccaagataaagtcttggtcaagtttctatataaagtaaattacgtattgttgta |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3464677 |
caagtgtaacctaaaacatgaatgtattccagcactgaatgaagaaccaagataaagtcttggtcaagtttctatataaagtaaattacgtattgttgta |
3464578 |
T |
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| Q |
117 |
taaaattcacacaacaccgacttgactgtctatctagtaatattcatagtaccaatagtggaattgctggataacacgtttaactagcacacacgtatgt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3464577 |
taaaattcacacaacaccgacttgactgtctatctagtaatattcatagtaccaatagtggaattgctggataacacgtttaactagcacacacgtatgt |
3464478 |
T |
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| Q |
217 |
tggattggtcaaattctgaaaactt |
241 |
Q |
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||||||||||||||||||||||||| |
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| T |
3464477 |
tggattggtcaaattctgaaaactt |
3464453 |
T |
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