View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3648_high_30 (Length: 306)

Name: NF3648_high_30
Description: NF3648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3648_high_30
NF3648_high_30
[»] chr6 (53 HSPs)
chr6 (1-291)||(13851738-13852028)
chr6 (36-291)||(13855635-13855891)
chr6 (1-94)||(5732474-5732567)
chr6 (1-63)||(7265588-7265650)
chr6 (1-64)||(19040354-19040417)
chr6 (1-94)||(20371074-20371167)
chr6 (5-57)||(8931603-8931655)
chr6 (5-57)||(9025495-9025547)
chr6 (5-57)||(26562695-26562747)
chr6 (1-64)||(7377981-7378044)
chr6 (1-52)||(30866150-30866201)
chr6 (1-49)||(1532242-1532290)
chr6 (1-57)||(9027180-9027236)
chr6 (1-57)||(9629385-9629441)
chr6 (5-52)||(7086801-7086848)
chr6 (6-57)||(9195755-9195806)
chr6 (2-57)||(9617437-9617492)
chr6 (1-52)||(9658881-9658932)
chr6 (11-53)||(11591875-11591917)
chr6 (1-63)||(13360367-13360429)
chr6 (5-63)||(21924930-21924988)
chr6 (1-51)||(33468389-33468439)
chr6 (6-63)||(12627572-12627629)
chr6 (1-50)||(32511674-32511723)
chr6 (4-57)||(34073348-34073401)
chr6 (1-57)||(5462688-5462744)
chr6 (19-75)||(7027262-7027317)
chr6 (5-57)||(7996379-7996431)
chr6 (5-57)||(8022370-8022422)
chr6 (1-53)||(10842534-10842586)
chr6 (1-64)||(31579221-31579282)
chr6 (7-94)||(426478-426565)
chr6 (6-53)||(1681765-1681812)
chr6 (7-50)||(7569176-7569219)
chr6 (6-57)||(19044471-19044522)
chr6 (5-64)||(28715301-28715360)
chr6 (5-64)||(33001283-33001342)
chr6 (2-52)||(6665216-6665266)
chr6 (5-63)||(7977825-7977883)
chr6 (1-51)||(17341671-17341721)
chr6 (4-62)||(24832593-24832650)
chr6 (1-43)||(25207766-25207808)
chr6 (6-64)||(34595141-34595199)
chr6 (1-50)||(7151414-7151463)
chr6 (1-50)||(10888982-10889031)
chr6 (10-63)||(12627811-12627864)
chr6 (22-63)||(12690439-12690480)
chr6 (1-46)||(33817951-33817996)
chr6 (7-52)||(34446573-34446618)
chr6 (6-46)||(2040609-2040649)
chr6 (5-57)||(16766703-16766755)
chr6 (1-57)||(21395309-21395364)
chr6 (5-64)||(30851608-30851665)
[»] chr3 (35 HSPs)
chr3 (2-97)||(49505115-49505210)
chr3 (1-82)||(7928452-7928533)
chr3 (1-57)||(16192751-16192807)
chr3 (1-57)||(8039836-8039892)
chr3 (1-64)||(8383259-8383322)
chr3 (7-77)||(20691327-20691399)
chr3 (9-64)||(8789544-8789599)
chr3 (1-52)||(10690268-10690319)
chr3 (1-52)||(34307786-34307837)
chr3 (10-52)||(7931604-7931646)
chr3 (6-56)||(29508451-29508501)
chr3 (1-51)||(32804547-32804597)
chr3 (5-50)||(11313808-11313853)
chr3 (11-63)||(6780414-6780466)
chr3 (7-63)||(25093510-25093566)
chr3 (1-64)||(40993329-40993393)
chr3 (1-52)||(4990973-4991024)
chr3 (5-44)||(11251984-11252023)
chr3 (7-54)||(11658823-11658870)
chr3 (1-48)||(12704009-12704056)
chr3 (2-57)||(38731221-38731276)
chr3 (7-62)||(40150567-40150622)
chr3 (5-64)||(45451559-45451618)
chr3 (5-47)||(9624647-9624689)
chr3 (1-47)||(11493372-11493418)
chr3 (4-57)||(11665949-11666002)
chr3 (7-52)||(24205047-24205092)
chr3 (7-52)||(24633407-24633452)
chr3 (5-50)||(25948895-25948940)
chr3 (4-48)||(1438809-1438853)
chr3 (7-63)||(3730161-3730216)
chr3 (1-45)||(5407260-5407304)
chr3 (1-57)||(9800042-9800098)
chr3 (3-47)||(15812832-15812876)
chr3 (5-57)||(28918007-28918059)
[»] chr8 (44 HSPs)
chr8 (1-63)||(34897087-34897149)
chr8 (1-48)||(4611536-4611583)
chr8 (1-57)||(24362203-24362259)
chr8 (5-63)||(13844591-13844649)
chr8 (5-94)||(12606791-12606882)
chr8 (1-49)||(39954288-39954336)
chr8 (5-64)||(3025557-3025616)
chr8 (1-52)||(7658465-7658516)
chr8 (6-57)||(14134706-14134757)
chr8 (5-48)||(29776042-29776085)
chr8 (5-52)||(31236583-31236630)
chr8 (7-57)||(4786339-4786389)
chr8 (7-57)||(11927087-11927137)
chr8 (5-50)||(14731718-14731763)
chr8 (7-64)||(33405378-33405435)
chr8 (7-51)||(8798838-8798882)
chr8 (6-46)||(13203648-13203688)
chr8 (1-57)||(20679396-20679452)
chr8 (1-57)||(33382020-33382076)
chr8 (7-50)||(3508060-3508103)
chr8 (7-50)||(11803267-11803310)
chr8 (5-56)||(12570510-12570561)
chr8 (2-57)||(16987915-16987970)
chr8 (5-52)||(27213553-27213600)
chr8 (1-44)||(37283824-37283867)
chr8 (9-64)||(38079009-38079064)
chr8 (6-64)||(4948659-4948717)
chr8 (7-57)||(11944673-11944723)
chr8 (1-51)||(20785472-20785522)
chr8 (7-57)||(31580128-31580178)
chr8 (7-52)||(3658155-3658200)
chr8 (1-38)||(18067954-18067991)
chr8 (9-50)||(30133160-30133201)
chr8 (7-48)||(34201056-34201097)
chr8 (1-50)||(36934672-36934721)
chr8 (7-48)||(37225753-37225794)
chr8 (7-52)||(44067524-44067569)
chr8 (25-57)||(8293851-8293883)
chr8 (7-63)||(12985400-12985456)
chr8 (1-57)||(24669435-24669491)
chr8 (5-57)||(25566847-25566899)
chr8 (17-57)||(26902176-26902216)
chr8 (4-52)||(34222952-34223000)
chr8 (8-52)||(40332200-40332244)
[»] chr7 (50 HSPs)
chr7 (1-63)||(20549793-20549855)
chr7 (5-77)||(3721099-3721171)
chr7 (1-94)||(27945043-27945137)
chr7 (1-62)||(5835249-5835310)
chr7 (1-57)||(6630913-6630969)
chr7 (5-57)||(7328692-7328744)
chr7 (2-44)||(14729704-14729746)
chr7 (1-51)||(32308122-32308172)
chr7 (2-51)||(17851434-17851483)
chr7 (1-58)||(19206052-19206109)
chr7 (10-50)||(17307904-17307944)
chr7 (4-64)||(21880157-21880217)
chr7 (1-52)||(2948685-2948736)
chr7 (1-64)||(26733306-26733369)
chr7 (1-44)||(29787383-29787426)
chr7 (1-51)||(5548678-5548728)
chr7 (1-51)||(22868044-22868094)
chr7 (1-63)||(28155572-28155634)
chr7 (1-63)||(42720885-42720947)
chr7 (1-50)||(8160418-8160467)
chr7 (4-57)||(9482939-9482992)
chr7 (7-52)||(12278843-12278888)
chr7 (1-62)||(22484027-22484088)
chr7 (12-57)||(22602711-22602756)
chr7 (5-62)||(24146822-24146879)
chr7 (7-52)||(27732245-27732290)
chr7 (1-62)||(32287459-32287520)
chr7 (4-64)||(1401030-1401090)
chr7 (4-44)||(2424619-2424659)
chr7 (5-57)||(19992007-19992059)
chr7 (1-65)||(23191898-23191962)
chr7 (1-64)||(598210-598273)
chr7 (6-57)||(11665441-11665492)
chr7 (1-52)||(27093419-27093470)
chr7 (1-52)||(27184831-27184882)
chr7 (1-52)||(38134412-38134463)
chr7 (7-49)||(16341504-16341546)
chr7 (10-52)||(18233604-18233646)
chr7 (8-54)||(19930945-19930991)
chr7 (5-43)||(30813818-30813856)
chr7 (7-77)||(38143231-38143301)
chr7 (7-52)||(15902830-15902875)
chr7 (6-51)||(18013081-18013126)
chr7 (7-52)||(26329388-26329433)
chr7 (1-42)||(30731039-30731080)
chr7 (7-52)||(43250001-43250046)
chr7 (1-57)||(1433456-1433512)
chr7 (7-51)||(4909159-4909203)
chr7 (5-57)||(24339648-24339700)
chr7 (1-57)||(49107823-49107878)
[»] chr2 (42 HSPs)
chr2 (2-82)||(34691781-34691861)
chr2 (2-82)||(34714193-34714273)
chr2 (1-57)||(37411245-37411301)
chr2 (6-94)||(19536361-19536450)
chr2 (1-50)||(21616764-21616813)
chr2 (1-57)||(18276523-18276579)
chr2 (1-57)||(44860322-44860378)
chr2 (1-52)||(23718028-23718079)
chr2 (1-52)||(24105700-24105751)
chr2 (6-64)||(5367199-5367257)
chr2 (1-57)||(29970550-29970606)
chr2 (1-57)||(42832277-42832333)
chr2 (3-58)||(18889591-18889646)
chr2 (1-48)||(28677911-28677958)
chr2 (1-94)||(19573980-19574078)
chr2 (1-51)||(31808079-31808129)
chr2 (7-52)||(44605145-44605190)
chr2 (5-57)||(30717531-30717583)
chr2 (1-45)||(31456654-31456698)
chr2 (7-51)||(35449521-35449565)
chr2 (1-52)||(10535765-10535816)
chr2 (6-57)||(12668424-12668475)
chr2 (7-50)||(19613621-19613664)
chr2 (5-44)||(21782832-21782871)
chr2 (2-45)||(23921256-23921299)
chr2 (1-64)||(31018592-31018655)
chr2 (6-57)||(36756345-36756396)
chr2 (1-52)||(39279677-39279728)
chr2 (1-51)||(18570974-18571024)
chr2 (17-63)||(20242722-20242768)
chr2 (1-43)||(21091725-21091767)
chr2 (2-56)||(36281688-36281742)
chr2 (13-63)||(37491850-37491900)
chr2 (1-43)||(39323266-39323308)
chr2 (7-56)||(4229410-4229459)
chr2 (7-52)||(30527601-30527646)
chr2 (12-57)||(38355888-38355933)
chr2 (1-49)||(2665897-2665945)
chr2 (5-57)||(11223864-11223916)
chr2 (13-49)||(15909641-15909677)
chr2 (1-57)||(24975326-24975382)
chr2 (1-45)||(25846743-25846787)
[»] chr5 (39 HSPs)
chr5 (1-64)||(30502382-30502445)
chr5 (1-64)||(30542725-30542788)
chr5 (1-57)||(3966505-3966561)
chr5 (2-46)||(17593734-17593778)
chr5 (1-57)||(36838545-36838601)
chr5 (5-57)||(41091258-41091310)
chr5 (1-64)||(28588668-28588731)
chr5 (1-64)||(34879352-34879415)
chr5 (5-50)||(6471897-6471942)
chr5 (1-57)||(12264830-12264886)
chr5 (5-96)||(8420033-8420124)
chr5 (5-64)||(21576739-21576798)
chr5 (2-64)||(26312772-26312834)
chr5 (1-51)||(27144465-27144515)
chr5 (1-43)||(27932237-27932279)
chr5 (5-62)||(16203791-16203848)
chr5 (7-56)||(23015991-23016040)
chr5 (10-51)||(35904656-35904697)
chr5 (1-57)||(6035485-6035540)
chr5 (1-57)||(11685941-11685997)
chr5 (9-52)||(18421847-18421890)
chr5 (10-49)||(24273039-24273078)
chr5 (10-49)||(24389136-24389175)
chr5 (2-52)||(5467984-5468034)
chr5 (6-64)||(6247629-6247687)
chr5 (5-63)||(21191051-21191109)
chr5 (1-51)||(32630742-32630792)
chr5 (2-63)||(2548390-2548451)
chr5 (7-52)||(18607103-18607148)
chr5 (2-63)||(19737477-19737538)
chr5 (7-52)||(25863212-25863257)
chr5 (7-52)||(31264446-31264491)
chr5 (1-50)||(32766951-32767000)
chr5 (6-47)||(35017044-35017085)
chr5 (1-50)||(38749571-38749620)
chr5 (9-57)||(14873527-14873575)
chr5 (1-49)||(18592075-18592123)
chr5 (1-41)||(21577125-21577165)
chr5 (5-57)||(31084329-31084381)
[»] chr1 (56 HSPs)
chr1 (1-64)||(36878463-36878526)
chr1 (1-94)||(9709822-9709914)
chr1 (1-94)||(41877432-41877527)
chr1 (1-51)||(26238120-26238169)
chr1 (5-51)||(34712390-34712436)
chr1 (5-63)||(40181877-40181935)
chr1 (3-57)||(44482234-44482288)
chr1 (7-52)||(1864886-1864931)
chr1 (1-50)||(6427352-6427401)
chr1 (6-51)||(7918218-7918263)
chr1 (1-50)||(25098563-25098612)
chr1 (1-57)||(5376501-5376557)
chr1 (1-57)||(20157351-20157407)
chr1 (1-53)||(24176372-24176424)
chr1 (1-57)||(34371716-34371771)
chr1 (1-57)||(38503322-38503378)
chr1 (1-57)||(40285655-40285711)
chr1 (1-64)||(2896115-2896178)
chr1 (1-64)||(5898260-5898323)
chr1 (1-64)||(14332636-14332699)
chr1 (1-52)||(17831537-17831588)
chr1 (1-51)||(398772-398822)
chr1 (1-51)||(10233255-10233305)
chr1 (1-51)||(17754313-17754363)
chr1 (9-51)||(25361896-25361938)
chr1 (1-63)||(39953141-39953203)
chr1 (1-63)||(43492489-43492551)
chr1 (6-63)||(18190103-18190160)
chr1 (2-63)||(23636044-23636105)
chr1 (5-74)||(31672879-31672948)
chr1 (1-50)||(36905999-36906048)
chr1 (7-52)||(39101188-39101233)
chr1 (5-57)||(1486710-1486762)
chr1 (1-57)||(9828046-9828102)
chr1 (5-49)||(12443469-12443513)
chr1 (9-49)||(19324572-19324612)
chr1 (2-50)||(27471574-27471622)
chr1 (1-45)||(34298438-34298482)
chr1 (1-52)||(10572595-10572646)
chr1 (5-64)||(13436464-13436523)
chr1 (1-64)||(28674802-28674865)
chr1 (5-52)||(31015049-31015096)
chr1 (17-63)||(30749858-30749904)
chr1 (17-63)||(30771309-30771355)
chr1 (2-64)||(52903252-52903314)
chr1 (1-50)||(17425101-17425150)
chr1 (5-50)||(19562629-19562674)
chr1 (2-47)||(21038086-21038131)
chr1 (5-62)||(38075966-38076023)
chr1 (7-64)||(40258927-40258984)
chr1 (1-50)||(42325562-42325611)
chr1 (9-57)||(2445880-2445928)
chr1 (1-57)||(9629901-9629957)
chr1 (5-41)||(36514396-36514432)
chr1 (7-63)||(39130762-39130818)
chr1 (7-51)||(40747780-40747824)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-52)||(44531-44582)
[»] scaffold0036 (1 HSPs)
scaffold0036 (6-57)||(9748-9799)
[»] chr4 (41 HSPs)
chr4 (1-64)||(8423712-8423775)
chr4 (1-52)||(40613452-40613503)
chr4 (1-51)||(3712516-3712566)
chr4 (1-50)||(36635326-36635375)
chr4 (1-49)||(22440609-22440657)
chr4 (1-48)||(903924-903971)
chr4 (1-52)||(16189711-16189762)
chr4 (1-51)||(35723391-35723442)
chr4 (7-57)||(5775359-5775409)
chr4 (8-50)||(46180944-46180986)
chr4 (6-64)||(54580017-54580075)
chr4 (7-52)||(19230315-19230360)
chr4 (7-52)||(24343515-24343560)
chr4 (9-57)||(13134460-13134508)
chr4 (1-57)||(30982879-30982935)
chr4 (3-63)||(33950140-33950200)
chr4 (1-57)||(38148726-38148782)
chr4 (8-62)||(9996849-9996903)
chr4 (1-51)||(18513248-18513298)
chr4 (6-64)||(35157979-35158037)
chr4 (7-57)||(40742599-40742649)
chr4 (15-57)||(46160912-46160954)
chr4 (4-53)||(999353-999402)
chr4 (5-50)||(15029771-15029816)
chr4 (5-50)||(15659768-15659813)
chr4 (9-50)||(18576045-18576086)
chr4 (5-62)||(21945509-21945566)
chr4 (1-46)||(30522927-30522972)
chr4 (7-44)||(32910559-32910596)
chr4 (7-64)||(40179630-40179687)
chr4 (8-49)||(44796971-44797012)
chr4 (28-56)||(1213223-1213251)
chr4 (1-45)||(1747214-1747258)
chr4 (5-57)||(4672086-4672138)
chr4 (1-57)||(7214523-7214579)
chr4 (8-56)||(11110212-11110260)
chr4 (1-57)||(11931282-11931338)
chr4 (1-49)||(13783283-13783331)
chr4 (7-51)||(31243555-31243599)
chr4 (6-46)||(37698719-37698759)
chr4 (17-57)||(44132645-44132685)
[»] scaffold0050 (1 HSPs)
scaffold0050 (7-64)||(70286-70343)
[»] scaffold0027 (1 HSPs)
scaffold0027 (7-96)||(46690-46778)
[»] scaffold0022 (2 HSPs)
scaffold0022 (7-63)||(90851-90907)
scaffold0022 (1-50)||(99895-99944)
[»] scaffold0020 (1 HSPs)
scaffold0020 (5-57)||(135313-135365)
[»] scaffold1528 (1 HSPs)
scaffold1528 (1-51)||(1037-1087)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-63)||(63775-63837)
[»] scaffold0044 (1 HSPs)
scaffold0044 (2-52)||(53183-53233)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-43)||(92809-92851)
[»] scaffold0066 (1 HSPs)
scaffold0066 (5-43)||(33378-33416)
[»] scaffold0011 (1 HSPs)
scaffold0011 (7-57)||(240022-240072)
[»] scaffold0008 (1 HSPs)
scaffold0008 (5-51)||(263379-263425)
[»] scaffold0376 (1 HSPs)
scaffold0376 (5-57)||(6318-6370)


Alignment Details
Target: chr6 (Bit Score: 287; Significance: 1e-161; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 13851738 - 13852028
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgaggaatgtctatgcttcatagttactt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13851738 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacctgaggaatgtctatgcttcatagttactt 13851837  T
Q  101 aactataagctagatccaaaattaagaaccaaaacagaaagttatgcctttgatgttagtctatcggggtcccttgcccttatgtaaatttgaaaatttt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13851838 aactataagctagatccaaaattaagaaccaaaacagaaagttatgcctttgatgttagtctatcggggtcccttgcccttatgtaaatttgaaaatttt 13851937  T
Q  201 aaagttgttgtatatatgtgtgtatatttcaatcacaagcttagacatcaagttttcaagcaccagttatgattctgaattatgttctaat 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13851938 aaagttgttgtatatatgtgtgtatatttcaatcacaagcttagacatcaagttttcaagcaccagttatgattctgaattatgttctaat 13852028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 36 - 291
Target Start/End: Original strand, 13855635 - 13855891
Alignment:
Q  36 tgtaattatatgtgtcgatgtctgacacgcctaacccgaggaatgtctatgcttcatagttacttaactataagctagatccaaaattaagaaccaaaac 135  Q
    |||||||||||||||||||||| ||||| ||||||||||||| |||   | ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13855635 tgtaattatatgtgtcgatgtccgacacacctaacccgaggagtgttcgtacttcatagttacttaactataagctagatccaaaatttagaaccaaaac 13855734  T
Q  136 agaaagttatgcctttgatgttagtctatcggggtcccttgcccttatgtaaatttgaa-aattttaaagttgttgtatatatgtgtgtatatttcaatc 234  Q
    ||||||||||||| ||||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13855735 agaaagttatgccattgatgttagtctgtcatggtcccttgcccttatgtaaatttgaacaattttaaagttgttgtatatatgtgtgtatatttcaatc 13855834  T
Q  235 acaagcttagacatcaagttttcaagcaccagttatgattctgaattatgttctaat 291  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13855835 acaagtttagacatcaagttttcaagcaccagttatgattctgaattatgttctaat 13855891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 5732567 - 5732474
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgaggaatgtctatgcttcatag 94  Q
    ||||| ||||||||||||||||| || || || ||||||||||||||||||| |||| ||||||||||| ||||||| |||| |||||||||||    
T  5732567 caccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcggacacgcctaatccgaggagtgtccatgcttcatag 5732474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 7265650 - 7265588
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||    
T  7265650 caccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19040354 - 19040417
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||  |||| ||||||    
T  19040354 caccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacg 19040417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 20371167 - 20371074
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgaggaatgtctatgcttcatag 94  Q
    ||||||||||||||||||||||| || ||| ||| ||| ||||||||||||| ||||  ||| |||||| ||||||| ||||| | ||||||||    
T  20371167 caccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgtcgaacaagcctaatccgaggagtgtctgttcttcatag 20371074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 8931655 - 8931603
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||| |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  8931655 gctaaaaatttgagaaaataacataattcagtataattatatgtgtcgatgtc 8931603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 9025547 - 9025495
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  9025547 gctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 9025495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 26562695 - 26562747
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||| ||||||||||||| || ||||||||||||||||||||||||||||||    
T  26562695 gctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtc 26562747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7377981 - 7378044
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||| ||||||||||||| || ||||||| ||||||||||||||||| |||| ||||||    
T  7377981 caccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacg 7378044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 30866201 - 30866150
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  30866201 caccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 30866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1532242 - 1532290
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 49  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||||||    
T  1532242 caccgctaataatttgataaaattacataattcagtgtaattatatgtg 1532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9027180 - 9027236
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||| ||| || |||||| |||||||||||||||||| ||||    
T  9027180 caccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgtc 9027236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9629385 - 9629441
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||| |||||||||||||||| || ||||||| ||||||||||||||||| ||||    
T  9629385 caccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtc 9629441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 7086801 - 7086848
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||||    
T  7086801 gctaataatttgagaaaatcacataatttagtgtaattatatgtgtcg 7086848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 9195806 - 9195755
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||||||||| || ||||| ||||||||||||||||||| ||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtc 9195755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 9617437 - 9617492
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||| ||||||||||||||||| || ||||||| ||||||||||||||||| ||||    
T  9617437 accggtaataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtc 9617492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9658881 - 9658932
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||| ||||||| || ||||||||||||||||||| |||||    
T  9658881 caccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcg 9658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 11591917 - 11591875
Alignment:
Q  11 aatttgagaaaataacgtaattcagtgtaattatatgtgtcga 53  Q
    ||||||||||||| || ||||||||||||||||||||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtcga 11591875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13360429 - 13360367
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    |||| ||| |||||||||||||| || ||||||||||||||||||||| ||| |||| |||||    
T  13360429 caccactagtaatttgagaaaatcacataattcagtgtaattatatgtttcggtgtcagacac 13360367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 21924988 - 21924930
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    |||||||||||||||| || |  ||||||||||||||||||||||||| |||| |||||    
T  21924988 gctaataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcggacac 21924930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 33468439 - 33468389
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||| ||||    
T  33468439 caccgctaataatttgaaaaaataacttaattcaatgtaattatatatgtc 33468389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 12627629 - 12627572
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    |||||||| ||| ||||| || |||||||||||||| ||||||||||||||| |||||    
T  12627629 ctaataatgtgaaaaaatcacataattcagtgtaataatatgtgtcgatgtcggacac 12627572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32511723 - 32511674
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||||| ||||||| || |||||||||||||||||| ||||    
T  32511723 caccgctaataatttaagaaaatcacataattcagtgtaattataagtgt 32511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 34073401 - 34073348
Alignment:
Q  4 cgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||||  | |||||||||||||||||||| |||| ||||    
T  34073401 cgctaataatttgagaaaatctcataattcagtgtaattatatgggtcggtgtc 34073348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5462688 - 5462744
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||| ||||||||||||||||| || ||||||| ||||||||||| ||| ||||||    
T  5462688 caccgttaataatttgagaaaatcacataattcattgtaattatatatgttgatgtc 5462744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 7027262 - 7027317
Alignment:
Q  19 aaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgag 75  Q
    ||||| || ||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  7027262 aaaatcacataattcagtgtaattatatgtgtcggtgtc-gacacgcctaatccgag 7027317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 7996431 - 7996379
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||| |  |||||||||||||||||||| |||| ||||    
T  7996431 gctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtc 7996379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 8022370 - 8022422
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||| |  |||||||||||||||||||| |||| ||||    
T  8022370 gctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgtc 8022422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10842534 - 10842586
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcga 53  Q
    ||||||||||||||||| ||||| || ||||| |||||||| |||||||||||    
T  10842534 caccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtcga 10842586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31579282 - 31579221
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||| ||||||||||||||||| || ||||||||||||||  ||||||||| |||| ||||||    
T  31579282 caccgttaataatttgagaaaatcacataattcagtgtaat--tatgtgtcggtgtcggacacg 31579221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 426565 - 426478
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgaggaatgtctatgcttcatag 94  Q
    ||||||||||| ||||| || ||||| | |||||||| | |||||| |||| ||||||||||| | ||||| ||||  ||||||||||    
T  426565 taataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcggacacgcctaatctgaggagtgtccgtgcttcatag 426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 1681765 - 1681812
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcga 53  Q
    |||||||||||| ||||| ||||||||||||||||||| | |||||||    
T  1681765 ctaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcga 1681812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 7569219 - 7569176
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||||||| || |||||||||||||||||| ||||    
T  7569219 taataatttgagaaaattacataattcagtgtaattataggtgt 7569176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 19044471 - 19044522
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||| || || ||||||||||| ||||||||||||| ||||    
T  19044471 ctaataatttgagaatatcacataattcagtgttattatatgtgtcggtgtc 19044522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 28715301 - 28715360
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||| ||||| || |||||||||||||||| | |||||| |||| ||||||    
T  28715301 gctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacacg 28715360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 33001342 - 33001283
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||| ||||| || ||||| | ||||||||||||||||| |||| ||||||    
T  33001342 gctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacacg 33001283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 6665216 - 6665266
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||| |||| || |||||||| |||||||| |||||||    
T  6665216 accgctaataatttgagtaaatcacataattcagagtaattatttgtgtcg 6665266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 7977883 - 7977825
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||| ||||| || |||||||||||||||| | |||||| |||| |||||    
T  7977883 gctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacac 7977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17341721 - 17341671
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||| ||||||||||| ||||| || |||||||||||||||||| |||||    
T  17341721 caccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 24832593 - 24832650
Alignment:
Q  4 cgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgaca 62  Q
    ||||||||||||||||||||    ||||| ||||||||||||||||||| |||||||||    
T  24832593 cgctaataatttgagaaaatcttataatttagtgtaattatatgtgtcg-tgtctgaca 24832650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25207766 - 25207808
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaatta 43  Q
    ||||||||||||||||||||| | |||||||||||| ||||||    
T  25207766 caccgctaataatttgagaaagttacgtaattcagtataatta 25207808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 34595141 - 34595199
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    |||||||||||| ||||| || |||||||||||||||| | |||||| |||| ||||||    
T  34595141 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 34595199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7151414 - 7151463
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    |||| |||||||||||| ||||| || ||||| |||||||||||||||||    
T  7151414 cacctctaataatttgaaaaaatcacataattaagtgtaattatatgtgt 7151463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10889031 - 10888982
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||||||| ||||| || ||||| ||||| |||||||||||    
T  10889031 caccgctaataatttgataaaatcacataatttagtgtgattatatgtgt 10888982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 12627864 - 12627811
Alignment:
Q  10 taatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    |||||| |||||||||| || |||| |||||| |||| ||||||||||||||||    
T  12627864 taatttaagaaaataacatatttcaatgtaatcatatatgtcgatgtctgacac 12627811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 12690439 - 12690480
Alignment:
Q  22 ataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||| ||||||| |||||||||||||||||||||| |||||    
T  12690439 ataacataattcaatgtaattatatgtgtcgatgtcggacac 12690480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33817951 - 33817996
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatat 46  Q
    |||||||||||||| ||||||||  | |||||||||||||||||||    
T  33817951 caccgctaataattggagaaaatttcataattcagtgtaattatat 33817996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 34446573 - 34446618
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||| || |||||||||||||| ||| ||||||    
T  34446573 taataatttgagaaaatgacataattcagtgtaatcataggtgtcg 34446618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 2040649 - 2040609
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatat 46  Q
    |||||||||||||||||| ||||||||||||  ||||||||    
T  2040649 ctaataatttgagaaaatcacgtaattcagtaaaattatat 2040609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 16766703 - 16766755
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||| ||||| || |||||||||||||||| | |||||| ||||    
T  16766703 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 16766755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21395364 - 21395309
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||||||| || ||||| |||||||||| | |||||| ||||    
T  21395364 caccgctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtc 21395309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 30851608 - 30851665
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||| ||||||| ||  |||||| ||||||||||||||||| |||| ||||||    
T  30851608 gctaataatttaagaaaatcac--aattcaatgtaattatatgtgtcggtgtcggacacg 30851665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 49505210 - 49505115
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgaggaatgtctatgcttcatagtta 97  Q
    |||||||||||||||||||||| || ||||| ||||||||||||||||||  |||| ||||||||||||| |||||| ||| ||||||||||||||    
T  49505210 accgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggacacgcctaacctgaggaacgtccatgcttcatagtta 49505115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7928452 - 7928533
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgaggaatgtc 82  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||||||||| |||| ||||||||||| | ||||| ||||    
T  7928452 caccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgcctaatctgaggagtgtc 7928533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16192807 - 16192751
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  16192807 caccgttaataatttgagaaaataacataattcagtgtaattatatgtgttgatgtc 16192751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8039892 - 8039836
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||||||| ||||    
T  8039892 caccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcggtgtc 8039836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8383259 - 8383322
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||||||||||| |  |||||||||||||||||| |||||| |||| ||||||    
T  8383259 caccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 20691327 - 20691399
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctg--acacgcctaacccgagga 77  Q
    ||||||||||||||||| || |||||||||||||| |||||||||| |||| |  ||||||| ||||||||||    
T  20691327 taataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtcagacacacgccaaacccgagga 20691399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 8789599 - 8789544
Alignment:
Q  9 ataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||| || |||||| |||||||||||||||||| |||| ||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacg 8789544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10690319 - 10690268
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||| |||||    
T  10690319 caccgctaataatctgagaaaatcacataattcagtgtaattatatttgtcg 10690268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 34307837 - 34307786
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||||||||| || || ||||||||||||||| ||||||    
T  34307837 caccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcg 34307786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 7931646 - 7931604
Alignment:
Q  10 taatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    |||||||||| ||||||||||||||||||||||||| ||||||    
T  7931646 taatttgagagaataacgtaattcagtgtaattataggtgtcg 7931604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 29508451 - 29508501
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgt 56  Q
    |||||||||||| ||||| |  |||||||||||||||||||||||||||||    
T  29508451 ctaataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgt 29508501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32804597 - 32804547
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||| ||||||||||||||||| || ||||| ||||||||||||||||||    
T  32804597 caccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 11313853 - 11313808
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||    
T  11313853 gctaataatttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 6780466 - 6780414
Alignment:
Q  11 aatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||| ||||| |||||||||||||||||||| | |||| |||||    
T  6780466 aatttgagaaaatcacgtagttcagtgtaattatatgtgttggtgtcggacac 6780414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 25093510 - 25093566
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    |||| |||||||||||| ||  |||||||||||||||||||||||| |||| |||||    
T  25093510 taatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacac 25093566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40993393 - 40993329
Alignment:
Q  1 caccgctaataatttgagaaaa-taacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||| | |||| | || ||||||||||||||||||||||||| |||| ||||||    
T  40993393 caccgctaataatttaaaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 40993329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 4991024 - 4990973
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||| ||||||||||| || |||||||||||||||| | ||||||    
T  4991024 caccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcg 4990973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 11251984 - 11252023
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattat 44  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  11251984 gctaataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 11658823 - 11658870
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgat 54  Q
    |||||||||||||||||  | ||||||||||| |||||||||||||||    
T  11658823 taataatttgagaaaatcgcataattcagtgtgattatatgtgtcgat 11658870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 12704009 - 12704056
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgt 48  Q
    |||| |||||||||||||||||  || |||||||||||||||||||||    
T  12704009 caccactaataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 38731221 - 38731276
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||||| | ||||| || |||||||||||| |||||||||||| ||||    
T  38731221 accgctaataattttaaaaaatcacataattcagtgtagttatatgtgtcggtgtc 38731276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 40150622 - 40150567
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgaca 62  Q
    ||||||||||||||||| |  ||||||| |||||| |||||||||| |||||||||    
T  40150622 taataatttgagaaaatgatataattcaatgtaatcatatgtgtcggtgtctgaca 40150567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 45451559 - 45451618
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||||||| || || |||||| |||| |||||||||| |||| ||||||    
T  45451559 gctaataatttgagaaaatcacatacttcagtataataatatgtgtcggtgtcggacacg 45451618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 9624647 - 9624689
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatg 47  Q
    ||||||||||||||||||| || ||||||| ||||||||||||    
T  9624647 gctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11493418 - 11493372
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatg 47  Q
    |||| |||||||| ||||||||| || ||||||||||||||||||||    
T  11493418 caccactaataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 11665949 - 11666002
Alignment:
Q  4 cgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||||| ||||| ||  |||| ||||||||||||||||||| ||||    
T  11665949 cgctaataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtc 11666002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 24205092 - 24205047
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||| || |||| ||||||||||||| ||||||    
T  24205092 taataatttgagaaaatgacataatacagtgtaattataagtgtcg 24205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 24633452 - 24633407
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||  ||||| |||||||||| |||||||||||||||||    
T  24633452 taataatttggaaaaatcacgtaattcaatgtaattatatgtgtcg 24633407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 25948940 - 25948895
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||| ||||| || |||||||||||||||||| ||||    
T  25948940 gctaataatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 1438809 - 1438853
Alignment:
Q  4 cgctaataatttgagaaaataacgtaattcagtgtaattatatgt 48  Q
    |||||| ||||||||||||| || ||||||||| |||||||||||    
T  1438809 cgctaacaatttgagaaaatcacataattcagtataattatatgt 1438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 3730216 - 3730161
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||| ||| || |||||||||||||| ||| |||||| ||||||||||    
T  3730216 taataatttgagataatgacataattcagtgtaatcataggtgtcg-tgtctgacac 3730161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5407304 - 5407260
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattata 45  Q
    ||||||||| ||||||||||||| || ||||||| ||||||||||    
T  5407304 caccgctaaaaatttgagaaaatcacataattcattgtaattata 5407260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9800042 - 9800098
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||| |||||||||||||||||| || |||||| |||||||| || |||||| ||||    
T  9800042 cacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtc 9800098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 15812876 - 15812832
Alignment:
Q  3 ccgctaataatttgagaaaataacgtaattcagtgtaattatatg 47  Q
    |||| |||||||||||||||| || ||| ||||||||||||||||    
T  15812876 ccgcaaataatttgagaaaatcacataactcagtgtaattatatg 15812832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 28918007 - 28918059
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||| ||||| || |||||||||||||||| | |||||| ||||    
T  28918007 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 28918059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 3e-20; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34897087 - 34897149
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||    
T  34897087 caccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcggacac 34897149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 4611536 - 4611583
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgt 48  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  4611536 caccgctaataatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24362259 - 24362203
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||| ||| || |||||||||||||||||||||||| |||||    
T  24362259 caccgctaataatttgagagaatcacataattcagtgtaattatatgtgtcaatgtc 24362203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 13844649 - 13844591
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||||||||| || ||||| ||||||||||||||||||| |||| |||||    
T  13844649 gctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 12606882 - 12606791
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgaca--cgcctaacccgaggaatgtctatgcttcatag 94  Q
    ||||||||||||||||||| |  ||||||| ||||||||||||||||| |||| ||||  ||||| | ||||||| ||||  ||||||||||    
T  12606882 gctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtcagacaagcgcctgatccgaggagtgtccgtgcttcatag 12606791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39954336 - 39954288
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 49  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||    
T  39954336 caccgctaataatttgagaaaatcacataatttagtgtaattatatgtg 39954288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 3025557 - 3025616
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||||||| || |||||||||||||||||| |||||  |||| ||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacacg 3025616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 7658465 - 7658516
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    |||| |||||||||||||||||| || ||||||||||||||||||| |||||    
T  7658465 caccactaataatttgagaaaattacataattcagtgtaattatatttgtcg 7658516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 14134706 - 14134757
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||| ||||    
T  14134706 ctaataatttgagaaaatcacataattcagtgtaattatatatgtcggtgtc 14134757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 29776042 - 29776085
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgt 48  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  29776042 gctaataatttgagaaaatcacgtaattcagtataattatatgt 29776085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 31236630 - 31236583
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||||    
T  31236630 gctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 4786389 - 4786339
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||| ||||    
T  4786389 taataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgtc 4786339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 11927137 - 11927087
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||| ||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcggtgtc 11927087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 14731718 - 14731763
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||    
T  14731718 gctaataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 33405435 - 33405378
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||||  || ||||| ||||||||||||||||||| |||| ||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcggacacg 33405378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 8798882 - 8798838
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    |||||||||||||||||||| ||||||| | ||||||||||||||    
T  8798882 taataatttgagaaaataacataattcaatataattatatgtgtc 8798838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 13203648 - 13203688
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatat 46  Q
    |||||||||||||||||| || |||||||||||||||||||    
T  13203648 ctaataatttgagaaaattacataattcagtgtaattatat 13203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20679452 - 20679396
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||| |||||||||||||||||| || || ||||||||||||||| |||||| ||||    
T  20679452 cacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtc 20679396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 33382076 - 33382020
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||| ||||||||| ||||||| || |||||||| |||||||||||||||| ||||    
T  33382076 caccgataataatttaagaaaatgacataattcagagtaattatatgtgtcggtgtc 33382020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 3508060 - 3508103
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||    
T  3508060 taataatttgagaaaataacataattcaatgtaatcatatgtgt 3508103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 11803267 - 11803310
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||| ||||||| || |||||||||||||||||||||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattatatgtgt 11803310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 12570561 - 12570510
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgt 56  Q
    ||||||||||| ||||||  || ||||| |||||||||||||||||||||||    
T  12570561 gctaataatttaagaaaaacacataattaagtgtaattatatgtgtcgatgt 12570510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 16987915 - 16987970
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||| ||||||||||||||||| |||||||||| || ||| ||||||||| |||||    
T  16987915 accggtaataatttgagaaaatcacgtaattcaatgcaatcatatgtgtcaatgtc 16987970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 27213553 - 27213600
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||| ||||||| || ||||||| |||||||||||||||||    
T  27213553 gctaataatttcagaaaatcacataattcactgtaattatatgtgtcg 27213600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37283867 - 37283824
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattat 44  Q
    ||||||||||||| ||||||||| || |||||||||||||||||    
T  37283867 caccgctaataatctgagaaaatcacataattcagtgtaattat 37283824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 38079009 - 38079064
Alignment:
Q  9 ataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||| ||||||| || | |||||||||||||||||| ||||||||| ||||||    
T  38079009 ataatttaagaaaatcacatgattcagtgtaattatatgcgtcgatgtcggacacg 38079064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 4948659 - 4948717
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    |||||||||||| ||||| || |||||||||||||||| | |||||| |||| ||||||    
T  4948659 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 4948717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 11944673 - 11944723
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||| ||||| || ||| ||||||||||||||||||||| ||||    
T  11944673 taataatttgataaaatcacataactcagtgtaattatatgtgtcggtgtc 11944723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 20785522 - 20785472
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    |||||||||||||||||| |||| || ||||| | ||||||||||||||||    
T  20785522 caccgctaataatttgaggaaatcacataatttaatgtaattatatgtgtc 20785472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 31580178 - 31580128
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||| ||||||| || ||||| |||||||||||| |||||||||||    
T  31580178 taataatttaagaaaatcacataattgagtgtaattataggtgtcgatgtc 31580128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 3658155 - 3658200
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||||| ||| ||||||||||| ||| ||||||    
T  3658155 taataatttgagaaaataatgtagttcagtgtaatcataggtgtcg 3658200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18067991 - 18067954
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgt 38  Q
    ||||||||||||||||||||||| || |||||||||||    
T  18067991 caccgctaataatttgagaaaatcacataattcagtgt 18067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 30133160 - 30133201
Alignment:
Q  9 ataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    |||||||||||||||||| ||||| || ||||||||||||||    
T  30133160 ataatttgagaaaataacataattgagggtaattatatgtgt 30133201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 34201097 - 34201056
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgt 48  Q
    ||||||||||||||||| || ||||||| |||||||||||||    
T  34201097 taataatttgagaaaatgacataattcaatgtaattatatgt 34201056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36934672 - 36934721
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    |||||||||||||| || ||||| || ||||||| |||||||||||||||    
T  36934672 caccgctaataattcgaaaaaatcacataattcattgtaattatatgtgt 36934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 37225794 - 37225753
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgt 48  Q
    |||||||||||||||||||| ||||||| |||||| ||||||    
T  37225794 taataatttgagaaaataacataattcaatgtaatcatatgt 37225753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 44067524 - 44067569
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||| || |||| ||||||||||||| ||||||    
T  44067524 taataatttgagaaaatgacataatacagtgtaattataagtgtcg 44067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 8293851 - 8293883
Alignment:
Q  25 acgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||||||||||||||||||| ||||    
T  8293851 acgtaattcagtgtaattatatgtgtcggtgtc 8293883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 12985400 - 12985456
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||||||| || ||||||| |||||| |||| ||||| |||| |||||    
T  12985400 taataatttgagaaaatcacataattcaatgtaatcatatatgtcggtgtcggacac 12985456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 24669435 - 24669491
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||| |||||||||||| |||| || |||||||||||||||| | |||||| ||||    
T  24669435 caccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcggtgtc 24669491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 25566847 - 25566899
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||| ||||| || |||||||||||||||| | |||||| ||||    
T  25566847 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 25566899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 26902216 - 26902176
Alignment:
Q  17 agaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||| || ||||||||||||||||||||||||| ||||    
T  26902216 agaaaatcacataattcagtgtaattatatgtgtcggtgtc 26902176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 34222952 - 34223000
Alignment:
Q  4 cgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    |||||||||||| | ||||| || ||||| |||||||||||||||||||    
T  34222952 cgctaataatttaataaaatcacataattaagtgtaattatatgtgtcg 34223000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 40332200 - 40332244
Alignment:
Q  8 aataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    |||||||||||||||| || |||||||||||||||| | ||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcg 40332244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 20549793 - 20549855
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  20549793 caccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacac 20549855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 3721099 - 3721171
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgagga 77  Q
    ||||||||||||||||||| || ||||| ||| ||||||||||||||| |||| ||||||||||| |||||||    
T  3721099 gctaataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcggacacgcctaatccgagga 3721171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 27945043 - 27945137
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc-tgacacgcctaacccgaggaatgtctatgcttcatag 94  Q
    |||| |||||||||||||||||| || |||||||||||||||| | |||||| |||| || |||||||||| |||||| ||||  ||||||||||    
T  27945043 caccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcacgcctaactcgaggagtgtccgtgcttcatag 27945137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 5835249 - 5835310
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgaca 62  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  5835249 caccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgtcagaca 5835310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6630969 - 6630913
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||| |||||||||||||||| | || ||||||||||||||||||||||||||||||    
T  6630969 caccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtc 6630913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 7328744 - 7328692
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  7328744 gctaataatttgagaaaataacataatttagtgtaattatatgtgtcggtgtc 7328692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 14729704 - 14729746
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattat 44  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  14729704 accgctaataatttgagaaaatcacgtaattcagtgtaattat 14729746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32308122 - 32308172
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  32308122 caccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtc 32308172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 51
Target Start/End: Original strand, 17851434 - 17851483
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    |||||||||||||| ||||||| || ||||||||||||||||||||||||    
T  17851434 accgctaataattttagaaaatcacataattcagtgtaattatatgtgtc 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19206052 - 19206109
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtct 58  Q
    ||||||||||||||||||||||| || ||||||| | ||||||||||||||| |||||    
T  19206052 caccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgtct 19206109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 17307904 - 17307944
Alignment:
Q  10 taatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgt 17307944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 21880157 - 21880217
Alignment:
Q  4 cgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    |||||||||||||||||||| || |||||||||||||||| | |||||| |||| ||||||    
T  21880157 cgctaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacacg 21880217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2948685 - 2948736
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||| ||||||| ||||||| |||||||| |||||||||||||||||||    
T  2948685 caccgctgataattttagaaaatcacgtaatttagtgtaattatatgtgtcg 2948736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26733306 - 26733369
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||||| ||||| || ||||||||| |||||| |||||||| |||| ||||||    
T  26733306 caccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcggacacg 26733369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 29787426 - 29787383
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattat 44  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  29787426 caccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5548678 - 5548728
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||| ||||||||||||||| |  ||||||||||||||||||||||||    
T  5548678 caccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtc 5548728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22868044 - 22868094
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    |||| |||||||| ||||||||| || ||||||||||||||||||||||||    
T  22868044 caccactaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 28155572 - 28155634
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||||||||||||| || |||||| ||||||||| | |||||| |||| |||||    
T  28155572 caccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcggacac 28155634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 42720947 - 42720885
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||||||| ||||| || ||||| | ||||||||||||||||  ||||||||||    
T  42720947 caccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcagtgtctgacac 42720885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8160418 - 8160467
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||||| ||||||| || ||||| |||||||||||||||||    
T  8160418 caccgctaataatttaagaaaattacataatttagtgtaattatatgtgt 8160467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 9482939 - 9482992
Alignment:
Q  4 cgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||| ||||||||||||||| ||  |||||||||||||||||||||||| ||||    
T  9482939 cgctgataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtc 9482992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 12278843 - 12278888
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||| ||||||| || |||||||||||||||||||||||||    
T  12278843 taataatttaagaaaatgacataattcagtgtaattatatgtgtcg 12278888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22484027 - 22484088
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgaca 62  Q
    ||||||||||||||| |||||||  | ||||||||| ||||||||||||||| |||| ||||    
T  22484027 caccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtcagaca 22484088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 22602756 - 22602711
Alignment:
Q  12 atttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 22602711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 24146822 - 24146879
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgaca 62  Q
    ||||||||||| ||||||| || ||||||| | ||||||||||||||| |||||||||    
T  24146822 gctaataattttagaaaatcacataattcaatataattatatgtgtcggtgtctgaca 24146879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 27732290 - 27732245
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||| ||||||| || |||||||||||||||||||||||||    
T  27732290 taataatttaagaaaattacataattcagtgtaattatatgtgtcg 27732245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32287520 - 32287459
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgaca 62  Q
    ||||||||||||| ||||||||| || |||||||||| || ||||||||||| |||| ||||    
T  32287520 caccgctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcggtgtcggaca 32287459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 1401030 - 1401090
Alignment:
Q  4 cgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    |||||||||||||||||| | || |||||||||||||||||| || ||| |||| ||||||    
T  1401030 cgctaataatttgagaaactcacataattcagtgtaattataagtatcggtgtccgacacg 1401090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 2424619 - 2424659
Alignment:
Q  4 cgctaataatttgagaaaataacgtaattcagtgtaattat 44  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  2424619 cgctaataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 19992007 - 19992059
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||| || || ||||||||||||||| |||||| ||||    
T  19992007 gctaataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtc 19992059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23191898 - 23191962
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgc 65  Q
    ||||||||||||||||||||||| || || ||||||||||||| |||| ||  |||| |||||||    
T  23191898 caccgctaataatttgagaaaatcacatatttcagtgtaattacatgtttcagtgtcagacacgc 23191962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 598210 - 598273
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||| ||||||| |||||||| | ||||||| || |||||| |||| ||||||    
T  598210 caccgctaataatttaagaaaatcacgtaattaaatgtaattgtaagtgtcggtgtcagacacg 598273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 11665492 - 11665441
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||| ||||| || ||||||||| |||||||| |||||||||||    
T  11665492 ctaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtc 11665441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27093470 - 27093419
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||| ||||||| || ||||| |||||||||||||| ||||    
T  27093470 caccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcg 27093419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27184831 - 27184882
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||| ||||||| || ||||| |||||||||||||| ||||    
T  27184831 caccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcg 27184882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 38134463 - 38134412
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||| ||||||||||||||||| || ||||||| |||||| ||||||||||    
T  38134463 caccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcg 38134412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Original strand, 16341504 - 16341546
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtg 49  Q
    ||||||||||||||||| || ||||| ||||||||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 18233646 - 18233604
Alignment:
Q  10 taatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    |||||||||||||| || |||||||||||||||||| ||||||    
T  18233646 taatttgagaaaatgacataattcagtgtaattataggtgtcg 18233604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 19930991 - 19930945
Alignment:
Q  8 aataatttgagaaaataacgtaattcagtgtaattatatgtgtcgat 54  Q
    |||||||||| ||||| || ||||||| |||||||||||||||||||    
T  19930991 aataatttgataaaatgacataattcaatgtaattatatgtgtcgat 19930945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 30813818 - 30813856
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaatta 43  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  30813818 gctaataatttgagaaaattacataattcagtgtaatta 30813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 38143231 - 38143301
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgagga 77  Q
    ||||||||||| ||||| || ||||| | ||||||||||||||| | |||| ||||| ||||| |||||||    
T  38143231 taataatttgaaaaaatcacataatttaatgtaattatatgtgttggtgtcagacacacctaatccgagga 38143301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 15902830 - 15902875
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||| ||||| || ||||| |||||||||||||||||||    
T  15902830 taataatttgataaaatcacataatttagtgtaattatatgtgtcg 15902875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 18013126 - 18013081
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    |||||||||| | ||||| || ||||||||||||||||||||||||    
T  18013126 ctaataatttaaaaaaattacataattcagtgtaattatatgtgtc 18013081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 26329433 - 26329388
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||  ||  ||||||||||||||||||||||||    
T  26329433 taataatttgagaaaaacacacaattcagtgtaattatatgtgtcg 26329388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30731039 - 30731080
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaatt 42  Q
    |||||| |||||||||||||||| || |||||||||||||||    
T  30731039 caccgcgaataatttgagaaaatcacataattcagtgtaatt 30731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 43250001 - 43250046
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||| || |||| ||||||||||||| ||||||    
T  43250001 taataatttgagaaaatgacataatacagtgtaattataagtgtcg 43250046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1433456 - 1433512
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||| ||||||||||||||||| || | |||  |||||||||||||||||| ||||    
T  1433456 caccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtc 1433512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 4909159 - 4909203
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||||||||||||| || ||||||| |||||| |||||||||    
T  4909159 taataatttgagaaaattacataattcattgtaatcatatgtgtc 4909203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 24339648 - 24339700
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||| ||||| || |||||||||||||||| | |||||| ||||    
T  24339648 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 24339700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 49107823 - 49107878
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||||||  || ||||| ||||| ||||||||||||| ||||    
T  49107823 caccgctaataatttgagaaaa-cacataattgagtgtgattatatgtgtcggtgtc 49107878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 34691861 - 34691781
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgaggaatgtc 82  Q
    |||||||||||||||| ||||| |  ||||||||||||||||||||||||| |||| ||||||||||| ||||||| ||||    
T  34691861 accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacgcctaatccgaggagtgtc 34691781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 34714273 - 34714193
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgaggaatgtc 82  Q
    |||||||||||||||| ||||| |  ||||||||||||||||||||||||| |||| ||||||||||| ||||||| ||||    
T  34714273 accgctaataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacgcctaatccgaggagtgtc 34714193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37411301 - 37411245
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  37411301 caccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcgatgtc 37411245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 19536450 - 19536361
Alignment:
Q  6 ctaataatttgagaaaa-taacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgaggaatgtctatgcttcatag 94  Q
    |||||||||||| |||| | || |||||||||||||||| | |||||| |||| ||||||||||| ||||||| |||| |||||||||||    
T  19536450 ctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgcctaatccgaggagtgtccatgcttcatag 19536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21616764 - 21616813
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||    
T  21616764 caccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18276523 - 18276579
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||||||| ||||    
T  18276523 caccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgtc 18276579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 44860322 - 44860378
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||||||||||||||  | ||||||||||||||||||||||||| ||||    
T  44860322 caccgctaataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtc 44860378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 23718028 - 23718079
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||||||    
T  23718028 caccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 24105700 - 24105751
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||||||| | || |||||||||||||||||||||||||    
T  24105700 caccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 5367199 - 5367257
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||| |||| || ||||||||||||||||||||||||| |||| ||||||    
T  5367199 ctaataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 5367257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29970606 - 29970550
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||||||||||||||  | || ||||||||||| |||||||||||||||    
T  29970606 caccgctaataatttgagaaaatcgcatagttcagtgtaatcatatgtgtcgatgtc 29970550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42832333 - 42832277
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||||||| || || ||||||||||||||| |||||| ||||    
T  42832333 caccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcggtgtc 42832277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 18889646 - 18889591
Alignment:
Q  3 ccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtct 58  Q
    |||||||||| |||||||||| || |||||||||||||| |||||||||| |||||    
T  18889646 ccgctaataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgtct 18889591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28677911 - 28677958
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgt 48  Q
    ||||||||||||||||| ||||| || |||||||||||||||||||||    
T  28677911 caccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 19573980 - 19574078
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattata-----tgtgtcgatgtctgacacgcctaacccgaggaatgtctatgcttcatag 94  Q
    ||||| ||||||||| |||||||||| ||||||||||||||||||      |||||| |||| ||||| |||||  |||||| |||| |||||||||||    
T  19573980 caccgataataatttaagaaaataacataattcagtgtaattataggtggcgtgtcggtgtcggacacacctaattcgaggagtgtccatgcttcatag 19574078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31808079 - 31808129
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||||||||||| | ||||| || ||||||||||||||||||||||||    
T  31808079 caccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtc 31808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 44605190 - 44605145
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    |||||||||||||||||||| ||||||| |||||||| ||||||||    
T  44605190 taataatttgagaaaataacataattcaatgtaattacatgtgtcg 44605145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30717583 - 30717531
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||| ||||| || |||||||||||||||| | |||||||||||    
T  30717583 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtc 30717531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31456698 - 31456654
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattata 45  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||    
T  31456698 caccgctaataatttaagaaaattatgtaattcagtgtaattata 31456654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 35449521 - 35449565
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||||||||||||| ||  |||||||||||||||||||||||    
T  35449521 taataatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10535816 - 10535765
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||| ||||||||||||||||| || |||||||||||||| ||| ||||||    
T  10535816 caccgataataatttgagaaaatgacataattcagtgtaatcataagtgtcg 10535765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 12668475 - 12668424
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||| ||||| || |||||||||||||||||| |||||| ||||    
T  12668475 ctaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtc 12668424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 19613664 - 19613621
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||    
T  19613664 taataatttgagaaaataacataattcaatgtaatgatatgtgt 19613621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 21782871 - 21782832
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattat 44  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  21782871 gctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 23921256 - 23921299
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattata 45  Q
    |||| ||||||||||||||||| || ||||||||||||||||||    
T  23921256 accgttaataatttgagaaaattacataattcagtgtaattata 23921299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 31018592 - 31018655
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||| ||||||| || | ||| |||||||||||| |||||| |||| ||||||    
T  31018592 caccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcggtgtcggacacg 31018655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 36756396 - 36756345
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||  ||||||| |||||||||||||||||| |||||| ||||    
T  36756396 ctaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtc 36756345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 39279677 - 39279728
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||| ||||||| ||||||||| |  |||||||||||||||||||||||||    
T  39279677 caccgttaataatatgagaaaatcaaataattcagtgtaattatatgtgtcg 39279728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 18570974 - 18571024
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||| ||||||||||||||||| || ||||||| |||||| |||||||||    
T  18570974 caccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtc 18571024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 20242768 - 20242722
Alignment:
Q  17 agaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||| || ||||||||||||||||||||||||| |||| |||||    
T  20242768 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 20242722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21091725 - 21091767
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaatta 43  Q
    ||||||||||||||| |||||||||| || |||||||||||||    
T  21091725 caccgctaataatttaagaaaataacatacttcagtgtaatta 21091767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 36281688 - 36281742
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgt 56  Q
    |||| ||||||||||||||||| || ||||| |||||||| |||||| |||||||    
T  36281688 accgttaataatttgagaaaatcacataatttagtgtaatcatatgtttcgatgt 36281742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 37491900 - 37491850
Alignment:
Q  13 tttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    |||||||||||||| ||||||| |||||||| |||||||| |||| |||||    
T  37491900 tttgagaaaataacttaattcaatgtaattaaatgtgtcggtgtcagacac 37491850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39323266 - 39323308
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaatta 43  Q
    ||||||||||||||||| ||||| || ||||||||||||||||    
T  39323266 caccgctaataatttgacaaaattacataattcagtgtaatta 39323308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 4229459 - 4229410
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgt 56  Q
    ||||||||| ||| ||| || |||||||||||||| ||||||||||||||    
T  4229459 taataatttaagagaatgacataattcagtgtaatcatatgtgtcgatgt 4229410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 30527646 - 30527601
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||| |  ||||| |||||||||||||||||||    
T  30527646 taataatttgagaaaatcatataatttagtgtaattatatgtgtcg 30527601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 38355933 - 38355888
Alignment:
Q  12 atttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||| || ||||||||||| ||||||||||||| ||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgtc 38355888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2665945 - 2665897
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 49  Q
    |||| |||||||||| ||||||| || ||||| ||||||||||||||||    
T  2665945 caccactaataattttagaaaatcacataatttagtgtaattatatgtg 2665897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 11223916 - 11223864
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||| ||||| |||||||| |||||||||||||||| | |||||| ||||    
T  11223916 gctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 15909677 - 15909641
Alignment:
Q  13 tttgagaaaataacgtaattcagtgtaattatatgtg 49  Q
    ||||||||||| || ||||||||||||||||||||||    
T  15909677 tttgagaaaattacataattcagtgtaattatatgtg 15909641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24975382 - 24975326
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||||||||||||||    ||||||||||||| |||||| |||| ||||    
T  24975382 caccgctaataatttgagaaaatcgtataattcagtgtaaatatatgcgtcggtgtc 24975326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25846743 - 25846787
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattata 45  Q
    |||| |||||||||||||||||| || | ||||||||||||||||    
T  25846743 caccactaataatttgagaaaatcacatgattcagtgtaattata 25846787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30502445 - 30502382
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| ||||||    
T  30502445 caccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacg 30502382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30542788 - 30542725
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| ||||||    
T  30542788 caccgctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacg 30542725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3966505 - 3966561
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||||||||| ||||    
T  3966505 caccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtc 3966561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 17593778 - 17593734
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatat 46  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  17593778 accgctaataatttgagaaaatcacgtaattcagtgtaattatat 17593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 36838545 - 36838601
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||    
T  36838545 caccgctaataatttgagaaaattacataatttagtgtaattatatgtgtcggtgtc 36838601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 41091310 - 41091258
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||| |||||||||||| || ||||||||||||||||||||||||||||||    
T  41091310 gctaatgatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtc 41091258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28588731 - 28588668
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||| ||||||||||||||||| || |||||||||||||||||| |||||| |||| ||||||    
T  28588731 caccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacacg 28588668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34879352 - 34879415
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||| ||||||||||||| |  |||||||||||||| ||||||||||||||| ||||||    
T  34879352 caccgctaaaaatttgagaaaatcatataattcagtgtaataatatgtgtcgatgtcggacacg 34879415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 6471942 - 6471897
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||||||||| || |||||||||||||||||||||||    
T  6471942 gctaataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12264886 - 12264830
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||| |||||||||||| || | |||||||||||||||||||||| |||||    
T  12264886 caccgctaattatttgagaaaattacatgattcagtgtaattatatgtgtcaatgtc 12264830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 8420033 - 8420124
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgaggaatgtctatgcttcatagtt 96  Q
    ||||||||||||| |||||||| ||||||| |||||||| | |||||| |||| ||| |||||||  |||||| | ||  ||||||||||||    
T  8420033 gctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtcggacgcgcctaattcgaggagtatccgtgcttcatagtt 8420124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 21576798 - 21576739
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||| ||||| || |||||||||||||||| | ||||||||||| ||||||    
T  21576798 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacg 21576739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 26312772 - 26312834
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||| |||||||||||||||| |  ||||||||||||||||||||| ||| |||| ||||||    
T  26312772 accgcaaataatttgagaaaatcaattaattcagtgtaattatatgtatcggtgtcggacacg 26312834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27144465 - 27144515
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    |||||||||||||||||| |||| || ||||| ||||||||||||||||||    
T  27144465 caccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27932237 - 27932279
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaatta 43  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  27932237 caccgctaataatttgagaaaattacataattcagtgtaatta 27932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 16203848 - 16203791
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgaca 62  Q
    |||||||||||||||||||  | ||||| ||||||||||||||||||| |||| ||||    
T  16203848 gctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcggaca 16203791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 23016040 - 23015991
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgt 56  Q
    |||| |||||||||||| || |||||||||||||||||| ||||||||||    
T  23016040 taatcatttgagaaaatcacataattcagtgtaattataggtgtcgatgt 23015991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 35904656 - 35904697
Alignment:
Q  10 taatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  35904656 taatttgaaaaaataacttaattcagtgtaattatatgtgtc 35904697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6035485 - 6035540
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||||| |||  ||||||||||||||||||| ||||| ||||    
T  6035485 caccgctaataatttgagaaa-taatataattcagtgtaattatatttgtcggtgtc 6035540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11685941 - 11685997
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||||| |  | ||||| ||||||||||||||||||| ||||    
T  11685941 caccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgtc 11685997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 18421890 - 18421847
Alignment:
Q  9 ataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||| || |||| ||||||||||||||||||||    
T  18421890 ataatttgagaaaatcacataatccagtgtaattatatgtgtcg 18421847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 24273078 - 24273039
Alignment:
Q  10 taatttgagaaaataacgtaattcagtgtaattatatgtg 49  Q
    |||||||||||||| || ||||||||||||||||||||||    
T  24273078 taatttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 49
Target Start/End: Original strand, 24389136 - 24389175
Alignment:
Q  10 taatttgagaaaataacgtaattcagtgtaattatatgtg 49  Q
    |||||||||||||| || ||||||||||||||||||||||    
T  24389136 taatttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 5468034 - 5467984
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    |||| ||||||||||| ||||| || |||||||||||||||||| ||||||    
T  5468034 accgataataatttgataaaatcacataattcagtgtaattataggtgtcg 5467984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 6247629 - 6247687
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    |||||||||||| ||||| || |||||||||||||||| | |||||| |||| ||||||    
T  6247629 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 6247687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 21191109 - 21191051
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||| ||||| || |||||||||||||||| | |||||| |||| |||||    
T  21191109 gctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 21191051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 32630792 - 32630742
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||| ||||||||||||||||| |  ||||||| ||||||||||||||||    
T  32630792 caccgataataatttgagaaaattatataattcaatgtaattatatgtgtc 32630742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 2548390 - 2548451
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    |||| |||||||| |||||||| || |||||||||||||| ||| |||||| |||| |||||    
T  2548390 accgataataattagagaaaattacataattcagtgtaatcataagtgtcggtgtcggacac 2548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 18607148 - 18607103
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    |||||||||||||||||||| ||||||| |||||| ||| ||||||    
T  18607148 taataatttgagaaaataacataattcaatgtaatcataggtgtcg 18607103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 19737538 - 19737477
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    |||| ||||||||||||||||| || ||||||| || ||| |||||||||| ||| ||||||    
T  19737538 accgataataatttgagaaaattacataattcaatgcaatcatatgtgtcggtgtttgacac 19737477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 25863212 - 25863257
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||| |  |||||||||||||||||| ||||||    
T  25863212 taataatttgagaaaatgatataattcagtgtaattataagtgtcg 25863257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 31264446 - 31264491
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||| || |||||||||||||| ||| ||||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcg 31264491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32767000 - 32766951
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    |||||||||||||||||||||||  |  |||||| |||||||||||||||    
T  32767000 caccgctaataatttgagaaaatcgcacaattcaatgtaattatatgtgt 32766951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 35017044 - 35017085
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatg 47  Q
    |||||||||||||||||| || ||||| ||||||||||||||    
T  35017044 ctaataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 38749620 - 38749571
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||| ||||||||||| ||||| || ||||||| |||||||||||||||    
T  38749620 caccgataataatttgaaaaaatgacataattcaatgtaattatatgtgt 38749571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 14873527 - 14873575
Alignment:
Q  9 ataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||  || ||||| ||||||||||||||||||| ||||    
T  14873527 ataatttgagaaaagcacataatttagtgtaattatatgtgtcggtgtc 14873575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18592075 - 18592123
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 49  Q
    ||||||||||| ||| ||||||| || ||||||| ||||||||||||||    
T  18592075 caccgctaatattttaagaaaattacataattcaatgtaattatatgtg 18592123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21577165 - 21577125
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaat 41  Q
    ||||| |||||||||||||||||||| ||||| ||||||||    
T  21577165 caccgataataatttgagaaaataacataattaagtgtaat 21577125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 31084329 - 31084381
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||| ||||| || ||||||| |||||||| | |||||||||||    
T  31084329 gctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtc 31084381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 36878463 - 36878526
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||||||||||| || |||||||||||||||||| |||||| |||||||||||    
T  36878463 caccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgacacg 36878526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 9709822 - 9709914
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgaggaatgtctatgcttcatag 94  Q
    ||||||||||||||||||||||| || ||||||  ||||||||||||||||| |||| ||||||| ||| || |||| |||| |||||||||||    
T  9709822 caccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcggacacgcttaatcc-aggagtgtccatgcttcatag 9709914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 41877527 - 41877432
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac--gcctaacccgaggaatgtctatgcttcatag 94  Q
    ||||||||||||||||||||||| || ||||| |||||||||| | |||||| |||| |||||  |||||||||||||| || |  ||||||||||    
T  41877527 caccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcggtgtcggacacgtgcctaacccgaggagtggccgtgcttcatag 41877432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 26238169 - 26238120
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  26238169 caccgctaataatttgagaaaataacataattcagtgtaa-tatatgtgtc 26238120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 34712436 - 34712390
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  34712436 gctaataatttgagaaaataacataatttagtgtaattatatgtgtc 34712390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 40181877 - 40181935
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||||||||| || ||||||||||||||||||||| ||| |||| |||||    
T  40181877 gctaataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacac 40181935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 44482234 - 44482288
Alignment:
Q  3 ccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||| ||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  44482234 ccgcttataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtc 44482288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 1864931 - 1864886
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||| || |||||||||||||||||||||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 1864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6427352 - 6427401
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||||||    
T  6427352 caccgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 6427401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 7918263 - 7918218
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  7918263 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 7918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25098612 - 25098563
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||| ||||||||||||||| || |||||||||||||||||||||||    
T  25098612 caccgctgataatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 5376557 - 5376501
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||| |||||||||| |||||||||||||||| | |||||| ||||    
T  5376557 caccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtc 5376501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20157407 - 20157351
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||| ||||||||| || |||||||||||||| |||||||||| ||||    
T  20157407 caccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtc 20157351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24176424 - 24176372
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcga 53  Q
    ||||| |||||||||||||||||||| | |||||||||||||||| |||||||    
T  24176424 caccgataataatttgagaaaataacatcattcagtgtaattataggtgtcga 24176372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 34371716 - 34371771
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||||||| ||||    
T  34371716 caccgctaataatt-gagaaaatcacataattcagtgtaattatatgtgtcggtgtc 34371771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38503322 - 38503378
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||||||| |  || |||||||||||||||||||||| ||||    
T  38503322 caccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtc 38503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 40285711 - 40285655
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||||||||||||||  | |||||||||||| | |||||||||||||||    
T  40285711 caccgctaataatttgagaaaatcgcataattcagtgtagtcatatgtgtcgatgtc 40285655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2896178 - 2896115
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||||||||||| || ||||||||||||  ||||| ||||| |||| ||||||    
T  2896178 caccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgtcagacacg 2896115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 5898323 - 5898260
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||| ||| ||||| || |||||||||||||||||||| |||| |||| ||||||    
T  5898323 caccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcagacacg 5898260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 14332699 - 14332636
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    |||| |||||||||||||||||| || ||||| ||||||||||||||| ||| |||| ||||||    
T  14332699 caccactaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcggacacg 14332636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17831588 - 17831537
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||||||||| || | |||||||||||| ||||||||||    
T  17831588 caccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcg 17831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 398822 - 398772
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||||||||||||| ||||| || |||||||||||||||||| |||||    
T  398822 caccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 10233255 - 10233305
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    |||| ||||||| |||||||||| || ||||||||||||||||||||||||    
T  10233255 caccactaataaattgagaaaatcacataattcagtgtaattatatgtgtc 10233305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 17754313 - 17754363
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||||||||||||| ||||| || ||||||||||||| ||||||||||    
T  17754313 caccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc 17754363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 25361896 - 25361938
Alignment:
Q  9 ataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtc 25361938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 39953203 - 39953141
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||||| ||||||| || ||||| ||||||||| ||||||||| |||| |||||    
T  39953203 caccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcggacac 39953141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 43492551 - 43492489
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    |||| ||| |||||||||||||| ||||||||| |||||||||| ||||||| |||| |||||    
T  43492551 caccactagtaatttgagaaaatcacgtaattcggtgtaattatgtgtgtcggtgtcagacac 43492489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 18190160 - 18190103
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    |||||||||||| ||||| || |||||||||||||||| | ||||||||||| |||||    
T  18190160 ctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtcagacac 18190103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 23636105 - 23636044
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||| || ||||||||||||| || ||||||||||||||| ||||||||| |||| |||||    
T  23636105 accgccaaaaatttgagaaaattacataattcagtgtaattgtatgtgtcggtgtcagacac 23636044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 31672948 - 31672879
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccga 74  Q
    ||||||||||||| ||||| || |||||||||||||||| | || ||| |||| ||||||||||| ||||    
T  31672948 gctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtcggacacgcctaatccga 31672879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36905999 - 36906048
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||| ||||||||| || |||||||| ||||||||||||||    
T  36905999 caccgctaataatctgagaaaatcacataattcagagtaattatatgtgt 36906048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 39101233 - 39101188
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||    
T  39101233 taataatttgagaaaataacataattaagtgtaattataggtgtcg 39101188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 1486762 - 1486710
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||| ||||| || |||||||||||||||||| |||||| ||||    
T  1486762 gctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc 1486710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9828046 - 9828102
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||| |||||||||||| ||||| || ||||||||||||||| ||||||||| ||||    
T  9828046 caccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtc 9828102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 12443513 - 12443469
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtg 49  Q
    ||||||||||||||||||| || ||||||||||||||| ||||||    
T  12443513 gctaataatttgagaaaatcacataattcagtgtaattgtatgtg 12443469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 19324572 - 19324612
Alignment:
Q  9 ataatttgagaaaataacgtaattcagtgtaattatatgtg 49  Q
    ||||||||||||||| || ||||||||||||||||||||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 27471622 - 27471574
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    |||||||||||||||||||||  || |||||||||||||||| ||||||    
T  27471622 accgctaataatttgagaaaagcacataattcagtgtaattacatgtgt 27471574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34298438 - 34298482
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattata 45  Q
    |||| |||||||||||||||||| || ||||||||||||||||||    
T  34298438 caccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10572646 - 10572595
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    |||| |||||||||||||||||| || |||||| ||||||||| ||||||||    
T  10572646 caccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcg 10572595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 13436464 - 13436523
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||| || |||| || ||||||||||||||||||||||| | |||| ||||||    
T  13436464 gctaataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcggacacg 13436523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28674802 - 28674865
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||| ||||||||||||||||| || ||||||||| ||||||||| ||| | |||| ||||||    
T  28674802 caccgttaataatttgagaaaattacataattcagtataattatatatgttggtgtcagacacg 28674865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 31015049 - 31015096
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||||| || |||||||||||||||| | ||||||    
T  31015049 gctaataatttgagaaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 30749858 - 30749904
Alignment:
Q  17 agaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||| || ||||||||||||||||||||||||| |||| |||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 30749904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 30771309 - 30771355
Alignment:
Q  17 agaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||| || ||||||||||||||||||||||||| |||| |||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 30771355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 52903252 - 52903314
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    |||| ||||||||| | ||||| |  ||||||||||||||||||||||||| |||| ||||||    
T  52903252 accgttaataatttaataaaatcatataattcagtgtaattatatgtgtcggtgtcggacacg 52903314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17425150 - 17425101
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||| ||||||||||| ||||| || ||||||| |||||||||||||||    
T  17425150 caccgataataatttgataaaatcacataattcaatgtaattatatgtgt 17425101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 19562674 - 19562629
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    |||||||||||||||||||  | || ||||||||||||||||||||    
T  19562674 gctaataatttgagaaaatctcatagttcagtgtaattatatgtgt 19562629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 21038086 - 21038131
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatg 47  Q
    |||||||||||||| ||||||| || |||||||||||||| |||||    
T  21038086 accgctaataatttaagaaaattacataattcagtgtaatcatatg 21038131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 38076023 - 38075966
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgaca 62  Q
    |||||||||||||| |||| || ||| |||||||||| |||||||||| |||| ||||    
T  38076023 gctaataatttgagtaaatcacataagtcagtgtaatcatatgtgtcggtgtcggaca 38075966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 40258984 - 40258927
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||| ||||| || |||||||||||||||| | |||||| |||| ||||||    
T  40258984 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcagacacg 40258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42325562 - 42325611
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||| ||||||||||||||||| || |||||||||||||  ||||||||    
T  42325562 caccgataataatttgagaaaatgacataattcagtgtaacaatatgtgt 42325611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 2445880 - 2445928
Alignment:
Q  9 ataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||| || ||||||| | |||| |||||||||||||||    
T  2445880 ataatttgagaaaatgacataattcaatttaatcatatgtgtcgatgtc 2445928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9629957 - 9629901
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||| ||||| |  ||||||||||| |||||| |||||| ||||    
T  9629957 caccgctaataatttgataaaatcatataattcagtgtgattataagtgtcggtgtc 9629901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 36514396 - 36514432
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaat 41  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  36514396 gctaataatttgagaaaataaagtaattcaatgtaat 36514432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 39130818 - 39130762
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||| ||||||| |  ||||| ||||||||||||||||||| |||| |||||    
T  39130818 taataattttagaaaattatataatttagtgtaattatatgtgtcggtgtcggacac 39130762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 40747824 - 40747780
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||||||||||||| || ||||||| |||||||||| |||||    
T  40747824 taataatttgagaaaatgacataattcaatgtaattataggtgtc 40747780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44582 - 44531
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  44582 caccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 44531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 9799 - 9748
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| ||||    
T  9799 ctaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtc 9748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 8423775 - 8423712
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||||||||||||||| || ||||||||||||||||||  ||||| |||| ||||||    
T  8423775 caccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggacacg 8423712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 40613452 - 40613503
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||| ||||||||||| || |||||||||||||||||||||||||    
T  40613452 caccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcg 40613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 3712566 - 3712516
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  3712566 caccgctaataatttgagaaaatcatgtaattcaatgtaattatatgtgtc 3712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 36635326 - 36635375
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    |||| |||||||||||||||||| || |||||||||||||||||||||||    
T  36635326 caccactaataatttgagaaaatcacataattcagtgtaattatatgtgt 36635375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22440657 - 22440609
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 49  Q
    ||||| ||||||||||||||||| || ||||||||||||||||||||||    
T  22440657 caccgttaataatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 903924 - 903971
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgt 48  Q
    ||||| ||||||||||||||||| || |||||||||||||||||||||    
T  903924 caccgttaataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 16189711 - 16189762
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||| ||||||||||||| || ||||||||||||||||| |||||||    
T  16189711 caccgctaaaaatttgagaaaatcacataattcagtgtaattatgtgtgtcg 16189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35723442 - 35723391
Alignment:
Q  1 caccgctaataatttgagaaaata-acgtaattcagtgtaattatatgtgtc 51  Q
    |||||||||||||||||||||||| || ||||||| ||||||||||||||||    
T  35723442 caccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtc 35723391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 5775409 - 5775359
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||| ||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtc 5775359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 46180986 - 46180944
Alignment:
Q  8 aataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||||||||| |||||||||||||| ||||||||    
T  46180986 aataatttgagaaaataacataattcagtgtaatcatatgtgt 46180944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 54580075 - 54580017
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    |||||||||||| ||||| || |||||||||||||||||| |||||| |||| ||||||    
T  54580075 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacacg 54580017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 19230360 - 19230315
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    |||||||||||||||||||| ||||||| |||||||||| ||||||    
T  19230360 taataatttgagaaaataacataattcaatgtaattataggtgtcg 19230315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 24343515 - 24343560
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||||||||||||||| || |||||||||||||||||| ||||||    
T  24343515 taataatttgagaaaattacataattcagtgtaattataggtgtcg 24343560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 13134460 - 13134508
Alignment:
Q  9 ataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||| ||||||| || ||||| ||||||||||||||||||||||||    
T  13134460 ataatttaagaaaatcacataatttagtgtaattatatgtgtcgatgtc 13134508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30982935 - 30982879
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||| |||||||||||| || || ||||||||||||||| |||||| ||||    
T  30982935 caccgctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtc 30982879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 33950140 - 33950200
Alignment:
Q  3 ccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||||||||||| || ||||| | |||||| |||||||||| |||| |||||    
T  33950140 ccgctaataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgtcagacac 33950200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38148782 - 38148726
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||| ||||||||||| || ||||||||||||||| ||  ||||||||||    
T  38148782 caccgctaatagtttgagaaaatcacataattcagtgtaattttaaatgtcgatgtc 38148726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 9996849 - 9996903
Alignment:
Q  8 aataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgaca 62  Q
    |||||||||||||||| || ||||||||| ||||||||||| ||| |||| ||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgtctcggtgtcagaca 9996903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 18513298 - 18513248
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||| ||||||||||||||||| || ||||||| |||||| |||||||||    
T  18513298 caccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtc 18513248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 35158037 - 35157979
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    |||||||||||  ||||| || ||||| |||||||||||| |||||| |||||||||||    
T  35158037 ctaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtctgacacg 35157979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 40742599 - 40742649
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||| |  ||||  ||||||||||||||||||||||||    
T  40742599 taataatttgagaaaatcatataatctagtgtaattatatgtgtcgatgtc 40742649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Original strand, 46160912 - 46160954
Alignment:
Q  15 tgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||    
T  46160912 tgagaaaataacataattcagtgttattatatgtgtcggtgtc 46160954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 999402 - 999353
Alignment:
Q  4 cgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcga 53  Q
    ||||||||||||||| |||| |  ||||| ||||||||||||||||||||    
T  999402 cgctaataatttgagtaaatcatataatttagtgtaattatatgtgtcga 999353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 15029771 - 15029816
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||| || || || |||||||||||||||||||||||    
T  15029771 gctaataatttgaaaatatcacataattcagtgtaattatatgtgt 15029816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 15659813 - 15659768
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    |||||||||||||||||||  | |||||| ||||||||||||||||    
T  15659813 gctaataatttgagaaaatctcataattcggtgtaattatatgtgt 15659768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 18576086 - 18576045
Alignment:
Q  9 ataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||||||||||||| || |||||| ||||||||||||||||    
T  18576086 ataatttgagaaaatcacataattcggtgtaattatatgtgt 18576045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 21945509 - 21945566
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgaca 62  Q
    ||||||||||||| ||||| || |||||||||||||||| | |||||| |||| ||||    
T  21945509 gctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggaca 21945566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30522972 - 30522927
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatat 46  Q
    |||||||||| |||||||||||| || ||||||||||||| |||||    
T  30522972 caccgctaattatttgagaaaatcacataattcagtgtaactatat 30522927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 32910559 - 32910596
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattat 44  Q
    ||||||||||||||||| || |||||||||||||||||    
T  32910559 taataatttgagaaaatgacataattcagtgtaattat 32910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 40179687 - 40179630
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||| ||||| ||||| || |||||||||||||||||||| |||| |||| ||||||    
T  40179687 taatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcggacacg 40179630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 44797012 - 44796971
Alignment:
Q  8 aataatttgagaaaataacgtaattcagtgtaattatatgtg 49  Q
    ||||||||||||||||||| ||||||| |||||||| |||||    
T  44797012 aataatttgagaaaataacataattcaatgtaattacatgtg 44796971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 56
Target Start/End: Complemental strand, 1213251 - 1213223
Alignment:
Q  28 taattcagtgtaattatatgtgtcgatgt 56  Q
    |||||||||||||||||||||||||||||    
T  1213251 taattcagtgtaattatatgtgtcgatgt 1213223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1747214 - 1747258
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattata 45  Q
    |||||||||||| |||||||||| || ||||||||| ||||||||    
T  1747214 caccgctaataaattgagaaaatcacataattcagtttaattata 1747258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 4672138 - 4672086
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||| |||||| || ||||||||||||  ||||||||||| ||||    
T  4672138 gctaataatttgggaaaattacataattcagtgtagctatatgtgtcggtgtc 4672086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 7214579 - 7214523
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||| |||||||||||||||||| || ||||| | |||||||||||| |||| ||||    
T  7214579 caccactaataatttgagaaaatcacataatttaatgtaattatatgcgtcggtgtc 7214523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 11110212 - 11110260
Alignment:
Q  8 aataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgt 56  Q
    |||||||||||||||| || ||||||  |||||| ||||||||||||||    
T  11110212 aataatttgagaaaatgacataattcgatgtaatcatatgtgtcgatgt 11110260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11931282 - 11931338
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||| ||||||| ||| ||||| || ||||| ||||||| ||||||||||||||||    
T  11931282 caccgttaataatatgaaaaaatcacataatttagtgtaaatatatgtgtcgatgtc 11931338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13783283 - 13783331
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 49  Q
    |||||||||| ||||||||| || ||  |||||||||||||||||||||    
T  13783283 caccgctaattatttgagaagatcacaaaattcagtgtaattatatgtg 13783331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 51
Target Start/End: Complemental strand, 31243599 - 31243555
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||||||||||||| || |||||||||||||| ||| |||||    
T  31243599 taataatttgagaaaatgacataattcagtgtaatcataggtgtc 31243555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 37698719 - 37698759
Alignment:
Q  6 ctaataatttgagaaaataacgtaattcagtgtaattatat 46  Q
    |||||||||||||||||| |  |||||||||||||||||||    
T  37698719 ctaataatttgagaaaattatataattcagtgtaattatat 37698759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 44132685 - 44132645
Alignment:
Q  17 agaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||| |||||||||||| ||||||||||||||| ||||    
T  44132685 agaaaatcacgtaattcagtataattatatgtgtcggtgtc 44132645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 70286 - 70343
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacg 64  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||| |||| ||||||    
T  70286 taataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggacacg 70343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 96
Target Start/End: Original strand, 46690 - 46778
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacacgcctaacccgaggaatgtctatgcttcatagtt 96  Q
    ||||||||||| ||||| || |||||||||||||||| |  ||||| |||| ||||||||||| ||||||| ||||  ||||||||||||    
T  46690 taataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtc-gacacgcctaatccgaggagtgtccgtgcttcatagtt 46778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 90851 - 90907
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||||||| |  ||||||||||||||||||| |||||||||| |||||    
T  90851 taataatttgagaaaatcatataattcagtgtaattatatatgtcgatgtcagacac 90907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 99895 - 99944
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 50  Q
    ||||| ||||||||| |||||||||| ||||||| |||||||||||||||    
T  99895 caccgataataattttagaaaataacataattcaatgtaattatatgtgt 99944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 135365 - 135313
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||||||||| || |||||| |||||||||||||||||| ||||    
T  135365 gctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtc 135313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 1037 - 1087
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||||||||||||| ||||| || ||||||||||||| ||||||||||    
T  1037 caccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc 1087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 63775 - 63837
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtctgacac 63  Q
    ||||||||||||||||||||||| || |||||||||| ||||| | |||||| |||| |||||    
T  63775 caccgctaataatttgagaaaattacataattcagtgcaattacaagtgtcggtgtcagacac 63837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 53183 - 53233
Alignment:
Q  2 accgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 52  Q
    ||||| |||||||||||||||| || |||||||||||||||||| ||||||    
T  53183 accgccaataatttgagaaaatcacataattcagtgtaattataagtgtcg 53233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 92809 - 92851
Alignment:
Q  1 caccgctaataatttgagaaaataacgtaattcagtgtaatta 43  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  92809 caccgctaataatttgagaaaattacataattcagtgtaatta 92851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 33416 - 33378
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaatta 43  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  33416 gctaataatttgaaaaaataacataattcagtgtaatta 33378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 240072 - 240022
Alignment:
Q  7 taataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    |||||||||||||||||||  ||||||| |||||| |||||||||| ||||    
T  240072 taataatttgagaaaataatataattcaatgtaatcatatgtgtcggtgtc 240022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 263425 - 263379
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtc 51  Q
    ||||||||||||||||||  || |||||||||||||||||| |||||    
T  263425 gctaataatttgagaaaaccacataattcagtgtaattataagtgtc 263379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 6318 - 6370
Alignment:
Q  5 gctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcgatgtc 57  Q
    ||||||||||||| |||||  | ||||||| ||||||||||||||||| ||||    
T  6318 gctaataatttgacaaaattgcataattcaatgtaattatatgtgtcggtgtc 6370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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