View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3648_low_49 (Length: 237)
Name: NF3648_low_49
Description: NF3648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3648_low_49 |
 | |
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| [»] chr4 (6 HSPs) |
| |
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| [»] chr8 (9 HSPs) |
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| [»] chr7 (13 HSPs) |
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| [»] chr5 (10 HSPs) |
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| [»] chr6 (9 HSPs) |
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| [»] chr3 (5 HSPs) |
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| [»] chr1 (3 HSPs) |
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| [»] scaffold0611 (1 HSPs) |
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| [»] scaffold0014 (1 HSPs) |
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| [»] scaffold0254 (1 HSPs) |
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| [»] scaffold0058 (1 HSPs) |
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| [»] scaffold0313 (2 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0141 (2 HSPs) |
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| [»] scaffold0049 (1 HSPs) |
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| [»] scaffold0015 (1 HSPs) |
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| [»] scaffold0529 (1 HSPs) |
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| [»] scaffold0010 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 16255124 - 16254888
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16255124 |
tcatcatcagcaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
16255025 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
16255024 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctaagtaattacagtgaccataggtctccacatacttggaagacatctcaa |
16254925 |
T |
|
| Q |
201 |
tatttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
16254924 |
tatttttctgattctatcatgagtagaatatgccttt |
16254888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 6694106 - 6693873
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
6694106 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
6694007 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
6694006 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
6693907 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
6693906 |
ttttctaattctatcatgagtggaatatgccttt |
6693873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 17151264 - 17151028
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17151264 |
tcatcatcagctactgatgaggtttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
17151165 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcag |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||| |||| | ||||||||||||||| | |
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|
| T |
17151164 |
ttagtgaaccaatgagatcttccaggttcatagattataaatctttggcctgagtaattgcattgaccataggtctccaaacacttggaagacatcttaa |
17151065 |
T |
|
| Q |
201 |
tatttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||| | |||||||||||||||||||| |
|
|
| T |
17151064 |
tatttttctaattcaaacatgagtagaatatgccttt |
17151028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 520375 - 520594
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
520375 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
520474 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
520475 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
520574 |
T |
|
| Q |
213 |
tctatcatgagtagaatatg |
232 |
Q |
| |
|
||| |||||||| ||||||| |
|
|
| T |
520575 |
tctctcatgagtggaatatg |
520594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 7844908 - 7845144
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | ||| |||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7844908 |
tcatcatcagctactaatgagctttgttgagatgctttcaatgcaagtgtctttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
7845007 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcag |
200 |
Q |
| |
|
||| ||| |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||| |||| | ||||||||||||||| | |
|
|
| T |
7845008 |
tcaatgagccaatgagatcttctagattcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccatacacttggaagacatcttaa |
7845107 |
T |
|
| Q |
201 |
tatttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||| |||||||||| ||||||||| |||||| |
|
|
| T |
7845108 |
tatttttctgattctatcataagtagaataagccttt |
7845144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 26813688 - 26813600
Alignment:
| Q |
136 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagt |
224 |
Q |
| |
|
||||| ||||| || || ||||||||||| ||||| ||| |||| | |||||||||||||| | |||||||| |||| ||||||||| |
|
|
| T |
26813688 |
tttaagtctttagcttgtgtgattgcagttaccatgggtctccatgtgcttggaagacatcttaaaatttttcttattcgatcatgagt |
26813600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 21211423 - 21211656
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
21211423 |
tcatcatcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
21211522 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
21211523 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
21211622 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
21211623 |
ttttctaattctatcatgagtggaatatgccttt |
21211656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 14892202 - 14892438
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14892202 |
tcatcatcagctactgatgagctttgctgagatgctttcaaggcaagtgttttcaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
14892301 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
14892302 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatcttctgcctgagtaattgcagtgaccataggtctccacatacttggaagacatctcaa |
14892401 |
T |
|
| Q |
201 |
tatttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
14892402 |
tatttttctaattctatcatgagtagaatataccttt |
14892438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 22832630 - 22832394
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
22832630 |
tcatcatcagctactgatgaggtttgctgagaggctttcaaggcaagtgattttaccttcttcactggtttgtctccttgaagtactacttcaggagctc |
22832531 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcag |
200 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||| | |
|
|
| T |
22832530 |
tcagtgaaccaatgagatcttcaaggttcatagatttcaaatctttggcctgagtgattgcagtgacgataggtctccacataattggaagacatctcgg |
22832431 |
T |
|
| Q |
201 |
tatttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
|| |||| ||||| |||||||| |||||||||||| |
|
|
| T |
22832430 |
aatctttccgattctttcatgagtggaatatgccttt |
22832394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 223
Target Start/End: Original strand, 33600415 - 33600572
Alignment:
| Q |
66 |
tggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtg |
165 |
Q |
| |
|
|||||||||| ||||||| | ||||||||| ||||| |||| |||||||||||||| | || || ||||| ||||||| ||||||||||| || |
|
|
| T |
33600415 |
tggtttgtcttcttgaagcaaaacttcatgggctcttagtgttccaatgagatcttctaaagccaaggaatttaagtctttggattgagtgattgctgta |
33600514 |
T |
|
| Q |
166 |
accataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
223 |
Q |
| |
|
||||||||| |||| || | ||||||||||| || |||||||| ||||| ||||||| |
|
|
| T |
33600515 |
accataggtctccatattttaggaagacatctgaggatttttctgattctgtcatgag |
33600572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 18234114 - 18234027
Alignment:
| Q |
136 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
223 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| || |||| |||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
18234114 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgag |
18234027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 18243565 - 18243478
Alignment:
| Q |
136 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
223 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| || |||| |||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
18243565 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgag |
18243478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 12916743 - 12916656
Alignment:
| Q |
136 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
223 |
Q |
| |
|
|||| ||||||| | ||||||||||| || ||||||||| |||| | |||| |||||||| | ||||||||||||||| ||||||| |
|
|
| T |
12916743 |
tttagatctttgtcttgagtgattgctgtaaccataggtctccatgtgtttgggagacatcttaatatttttctaattctgtcatgag |
12916656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 25035933 - 25036028
Alignment:
| Q |
136 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatat |
231 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| | |||| | |||||| | ||||||||| ||||| ||||||| ||||||| |
|
|
| T |
25035933 |
tttaagtctttggcttgagtgattgccgtaaccataggtctccatgtgtttgggaaacatcttaatatttttctgattctgtcatgaggagaatat |
25036028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 25049970 - 25050065
Alignment:
| Q |
136 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatat |
231 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| | |||| | |||||| | ||||||||| ||||| ||||||| ||||||| |
|
|
| T |
25049970 |
tttaagtctttggcttgagtgattgccgtaaccataggtctccatgtgtttgggaaacatcttaatatttttctgattctgtcatgaggagaatat |
25050065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 6536372 - 6536139
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
6536372 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
6536273 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
6536272 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
6536173 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
6536172 |
ttttctaattctatcatgagtggaatatgccttt |
6536139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 9543690 - 9543926
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||| ||| || ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9543690 |
tcatcttcagcagctgatgagctttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
9543789 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcag |
200 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
9543790 |
tcagtgaaccaataagatcttccaggttcatagattttaaatctttggcctgggtgattgcagtgaccataggtctccacatacttggaagacatcttag |
9543889 |
T |
|
| Q |
201 |
tatttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9543890 |
tatttttctaattctatcatgagtagaatatgccttt |
9543926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 5389624 - 5389857
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5389624 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
5389723 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
5389724 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
5389823 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
5389824 |
ttttctaattctatcatgagtggaatatgccttt |
5389857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 8502937 - 8502704
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
8502937 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgagctctta |
8502838 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
8502837 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
8502738 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
8502737 |
ttttctaattctatcatgagtggaatatgccttt |
8502704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 26305444 - 26305211
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
26305444 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
26305345 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
26305344 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
26305245 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
26305244 |
ttttctaattctatcatgagtggaatatgccttt |
26305211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 26361374 - 26361607
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
26361374 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
26361473 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
26361474 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
26361573 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
26361574 |
ttttctaattctatcatgagtggaatatgccttt |
26361607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 32100268 - 32100035
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
32100268 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
32100169 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
32100168 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
32100069 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
32100068 |
ttttctaattctatcatgagtggaatatgccttt |
32100035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 44899187 - 44898954
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
44899187 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgagctctta |
44899088 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
44899087 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
44898988 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
44898987 |
ttttctaattctatcatgagtggaatatgccttt |
44898954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 16140637 - 16140870
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
16140637 |
tcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
16140736 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || |
|
|
| T |
16140737 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagaat |
16140836 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
16140837 |
ttttctaattctatcatgagtggaatatgccttt |
16140870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 46499002 - 46498769
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
46499002 |
tcatcagcaactgatggagtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttaaagtacaacttcatgagctctta |
46498903 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || |
|
|
| T |
46498902 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagaat |
46498803 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
46498802 |
ttttctaattctatcatgagtggaatatgccttt |
46498769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 42597237 - 42597013
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
42597237 |
actgatgaggtttgttgagaggctttcaaggcaagtgactttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaacaaa |
42597138 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||| || |
|
|
| T |
42597137 |
tgagatcttccaggttcatagatttcaaatctttggcctcagtgattgcagtgaccataggtctctacatacttggaaggcatctcaatatttttctgat |
42597038 |
T |
|
| Q |
213 |
tctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||| |||||||| |||||||||||| |
|
|
| T |
42597037 |
tctctcatgagtggaatatgccttt |
42597013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 13 - 236
Target Start/End: Original strand, 13283892 - 13284115
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
||||||||| ||| |||||| |||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
13283892 |
actgatgaagtttactgagaggctttcaaggcaagtgactttaccttctttactagtttgtctccttgaagtacaacttcatgagctctaagtgaaccaa |
13283991 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||| | ||||||||| || |
|
|
| T |
13283992 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgaagtgaccataggtctccacatacttggaaggcatcttaatatttttctgat |
13284091 |
T |
|
| Q |
213 |
tctatcatgagtagaatatgcctt |
236 |
Q |
| |
|
||| |||||||| || |||||||| |
|
|
| T |
13284092 |
tctctcatgagtggagtatgcctt |
13284115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 223
Target Start/End: Original strand, 14643279 - 14643452
Alignment:
| Q |
50 |
tttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggc |
149 |
Q |
| |
|
||||| |||| ||||| ||||| ||| |||| |||| || |||||||||||| || | ||||| ||||| || ||| || || |||| ||||||||| |
|
|
| T |
14643279 |
tttttccctttttcaccggtttatcttcttggagtagaatttcatgagctctaagcgttccaataagatcctctagggccaaggaatttagatctttggc |
14643378 |
T |
|
| Q |
150 |
ctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
223 |
Q |
| |
|
||||||||||| || ||||||||| |||| | |||| |||||||| | ||||||||||||||| ||||||| |
|
|
| T |
14643379 |
ttgagtgattgctgtaaccataggtctccatgtgtttgggagacatcttaatatttttctaattctgtcatgag |
14643452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 27414036 - 27413803
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
27414036 |
tcatcagcaactgatggggtttgctgagatgctttcaaagcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
27413937 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
27413936 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagtat |
27413837 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
27413836 |
ttttctaattctatcatgagtagaatatgccttt |
27413803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 26200778 - 26201011
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
26200778 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
26200877 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
26200878 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
26200977 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
26200978 |
ttttctaattctatcatgagtggaatatgccttt |
26201011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 33941208 - 33940975
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
33941208 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgagctctta |
33941109 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
33941108 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
33941009 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
33941008 |
ttttctaattctatcatgagtggaatatgccttt |
33940975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 18363165 - 18362932
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
18363165 |
tcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
18363066 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || |
|
|
| T |
18363065 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagaat |
18362966 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
18362965 |
ttttctaattctatcatgagtggaatatgccttt |
18362932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 20949734 - 20949514
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20949734 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
20949635 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
20949634 |
tgagatcttccaggttcatagatttcaaatccttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
20949535 |
T |
|
| Q |
213 |
tctatcatgagtagaatatgc |
233 |
Q |
| |
|
||| |||||||| |||||||| |
|
|
| T |
20949534 |
tctctcatgagtggaatatgc |
20949514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 14 - 231
Target Start/End: Original strand, 23375368 - 23375577
Alignment:
| Q |
14 |
ctgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaat |
113 |
Q |
| |
|
|||||||| |||| |||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23375368 |
ctgatgaagtttgttgagatgctttcaaggaaagtgattttacctttttcactggtttgtctttttgaagtacaacttcatgagctctcagtgaaccaat |
23375467 |
T |
|
| Q |
114 |
gagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaatt |
213 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| ||||||| ||||||||| ||| |
|
|
| T |
23375468 |
gagatcttcaaggttcatagattttaaatctttggcctgagtaattgca---tccataggtctccacatacttg-----catctcaatatttttctgatt |
23375559 |
T |
|
| Q |
214 |
ctatcatgagtagaatat |
231 |
Q |
| |
|
|| |||||||| |||||| |
|
|
| T |
23375560 |
ctttcatgagtggaatat |
23375577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 22456358 - 22456523
Alignment:
| Q |
66 |
tggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtg |
165 |
Q |
| |
|
|||||||||| ||||||| | ||||||||||||||| |||| |||||||||||||| | || || |||||||||||||| ||||||||| | || |
|
|
| T |
22456358 |
tggtttgtcttcttgaagcaaaacttcatgagctcttagtgttccaatgagatcttctaaagccaaggaatttaaatctttggcttgagtgatttctgta |
22456457 |
T |
|
| Q |
166 |
accataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatat |
231 |
Q |
| |
|
||||||||| |||| ||| | ||||||||||| | ||||||||| ||||| ||||||| ||||||| |
|
|
| T |
22456458 |
accataggtctccatatattaggaagacatcttaatatttttctgattctgtcatgaggagaatat |
22456523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 223
Target Start/End: Complemental strand, 20037526 - 20037353
Alignment:
| Q |
50 |
tttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggc |
149 |
Q |
| |
|
||||| |||| ||||| ||||| ||| |||| |||| ||||||||||||||| |||| |||||||||| ||| | || || |||| ||| ||||| |
|
|
| T |
20037526 |
tttttccctttttcaccggtttatcttcttggagtagaacttcatgagctctaagtgttccaatgagattttctaaagccaaggaatttagatcgttggc |
20037427 |
T |
|
| Q |
150 |
ctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
223 |
Q |
| |
|
|||||||||| || ||||||||| ||||| | |||| |||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
20037426 |
ttgagtgattgttgtaaccataggtctccacgtgtttgggagacatcttaatatttttctgattctgtcatgag |
20037353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 24299175 - 24299262
Alignment:
| Q |
136 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
223 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| || |||| |||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
24299175 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgag |
24299262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 230
Target Start/End: Complemental strand, 5601928 - 5601840
Alignment:
| Q |
142 |
tctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaata |
230 |
Q |
| |
|
||||| || ||||||||||| || ||||| ||| |||| | ||||||||||||| ||||||||||| ||||| || || |||||||| |
|
|
| T |
5601928 |
tctttagcttgagtgattgccgtaaccatgggtctccattgagttggaagacatcttagtatttttcttattctgtcgtgggtagaata |
5601840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 45016244 - 45016012
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45016244 |
tcatcatcagcaactgatgagcttgactgagatgcttttaaggcaagtgtttttaccttctttactggtttgtctccttgaagtacaacttcatgagctc |
45016145 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcag |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
45016144 |
ttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcag |
45016045 |
T |
|
| Q |
201 |
tatttttctaattctatcatgagtagaatatgc |
233 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
45016044 |
tatttttctaattctatcatgagtagaatatgc |
45016012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 9512217 - 9512450
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9512217 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgagctctta |
9512316 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
9512317 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
9512416 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
9512417 |
ttttctaattctatcatgagtggaatatgccttt |
9512450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 18653106 - 18652873
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
18653106 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgagctctta |
18653007 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
18653006 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
18652907 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
18652906 |
ttttctaattctatcatgagtggaatatgccttt |
18652873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 13 - 233
Target Start/End: Original strand, 27168448 - 27168668
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27168448 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttactttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
27168547 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
27168548 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
27168647 |
T |
|
| Q |
213 |
tctatcatgagtagaatatgc |
233 |
Q |
| |
|
||| |||||||| |||||||| |
|
|
| T |
27168648 |
tctctcatgagtggaatatgc |
27168668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 22904018 - 22903794
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| ||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22904018 |
actgatgaggtttgctgagaggcttttaaggcaagtgactttaccttcttcattggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
22903919 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
212 |
Q |
| |
|
|||||||||||| |||||||||||| ||||||||||||||||| |||||||| ||||||||| |||||||||||||||| || |||| ||||||||| || |
|
|
| T |
22903918 |
tgagatcttccaagttcatagatttcaaatctttggcctgagtaattgcagttaccataggtctccacatacttggaaggcaactcaatatttttctgat |
22903819 |
T |
|
| Q |
213 |
tctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
| | |||||||| |||||| |||| |
|
|
| T |
22903818 |
tatctcatgagtgaaatatgtcttt |
22903794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 230
Target Start/End: Complemental strand, 1792304 - 1792216
Alignment:
| Q |
142 |
tctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaata |
230 |
Q |
| |
|
||||| || ||||||||||| || ||||| ||| |||| | ||||||||||||| ||||||||||| ||||| || || |||||||| |
|
|
| T |
1792304 |
tctttagcttgagtgattgccgtaaccatgggtctccattgagttggaagacatcttagtatttttcttattctgtcgtgggtagaata |
1792216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 31359449 - 31359216
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
31359449 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
31359350 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
31359349 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
31359250 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
31359249 |
ttttctaattctatcatgagtggaatatgccttt |
31359216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 16899834 - 16899601
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
16899834 |
tcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
16899735 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || |
|
|
| T |
16899734 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagaat |
16899635 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
16899634 |
ttttctaattctatcatgagttgaatatgccttt |
16899601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 18161953 - 18161720
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
18161953 |
tcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
18161854 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || |
|
|
| T |
18161853 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagaat |
18161754 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
18161753 |
ttttctaattctatcatgagtggaatatgccttt |
18161720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 34767235 - 34767015
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34767235 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
34767136 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
34767135 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
34767036 |
T |
|
| Q |
213 |
tctatcatgagtagaatatgc |
233 |
Q |
| |
|
||| |||||||| |||||||| |
|
|
| T |
34767035 |
tctctcatgagtggaatatgc |
34767015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 18704493 - 18704729
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | ||| |||| |||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
18704493 |
tcatcatcagctacttatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactgggttgtctccttgaagtacaactgcatgagctc |
18704592 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
18704593 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttggaagacatcttag |
18704692 |
T |
|
| Q |
201 |
tatttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
|| ||||| ||||| |||||||| |||||| ||||| |
|
|
| T |
18704693 |
aatctttctgattctctcatgagtggaatattccttt |
18704729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 18710428 - 18710664
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | ||| |||| |||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
18710428 |
tcatcatcagctacttatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactgggttgtctccttgaagtacaactgcatgagctc |
18710527 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
18710528 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttggaagacatcttag |
18710627 |
T |
|
| Q |
201 |
tatttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
|| ||||| ||||| |||||||| |||||| ||||| |
|
|
| T |
18710628 |
aatctttctgattctctcatgagtggaatattccttt |
18710664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 29561317 - 29561121
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
29561317 |
tcatcatcagctactgatgaggtttgctgagatgctttcaaagcaagtgtttttacattcttcactggtttatctccttgaagtacgacttcatgagctc |
29561218 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatct |
197 |
Q |
| |
|
| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||| || |||| ||||| ||||||||| |
|
|
| T |
29561217 |
ttagtgaaccaatgagatctttcaggttcatagattttaaatctttggcctaagtaattgttgtgaccatatgtcctcacacacttgaaagacatct |
29561121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 25895891 - 25895804
Alignment:
| Q |
136 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
223 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| || |||| |||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
25895891 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgag |
25895804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 29542147 - 29542102
Alignment:
| Q |
192 |
acatctcagtatttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
|||||| | ||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
29542147 |
acatcttaatatttttctgattctatcatgagtggaatatgccttt |
29542102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 9539023 - 9538790
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9539023 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
9538924 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
|
|
| T |
9538923 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
9538824 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
9538823 |
ttttctaattctatcatgagtggaatatgccttt |
9538790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 6424195 - 6423966
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
6424195 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
6424096 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| |
|
|
| T |
6424095 |
gtgaaccaatgagatcttccaggtttatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacacctcagtat |
6423996 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgc |
233 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
6423995 |
ttttctaattctatcatgagtagaatatgc |
6423966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 8974734 - 8974501
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
8974734 |
tcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtctttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
8974635 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || |
|
|
| T |
8974634 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagaat |
8974535 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
8974534 |
ttttctaattctatcatgagtggaatatgccttt |
8974501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 12387802 - 12387642
Alignment:
| Q |
77 |
cttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgt |
176 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||| ||||| ||| |||||||| |||||||||||||||||| | |
|
|
| T |
12387802 |
cttgaagtacaacttcatgagctatcagtgaatcaatgagatcttccaagttcatatattgtaaatatttagcctgagtaattgcagtgaccataggtct |
12387703 |
T |
|
| Q |
177 |
ccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
| |||||||||||| ||||||| ||||||||| | ||| |||| ||| |||||||||||| |
|
|
| T |
12387702 |
tcgcatacttggaaggcatctcaatatttttctgactctctcataagtggaatatgccttt |
12387642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 230
Target Start/End: Complemental strand, 48980022 - 48979934
Alignment:
| Q |
142 |
tctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaata |
230 |
Q |
| |
|
||||| || ||||||||||| || ||||| ||| |||| | ||||||||||||| ||||||||||| ||||| || || |||||||| |
|
|
| T |
48980022 |
tctttagcttgagtgattgccgtaaccatgggtctccattgagttggaagacatcttagtatttttcttattctgtcgtgggtagaata |
48979934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 16156771 - 16156538
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
16156771 |
tcatcagcaactgatggggtttgctgagatgctttcaaagcaggtgtttttaccttcttcactggtttgtctcgttgaagtacaacttcatgagctctta |
16156672 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
16156671 |
gtgaaccaatgagatcttccaggttcatagattttaaatcttttgcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagtat |
16156572 |
T |
|
| Q |
204 |
ttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |
|
|
| T |
16156571 |
ttttctaattttatcatgagtagaatatgccttt |
16156538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 13 - 233
Target Start/End: Original strand, 1987651 - 1987871
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
1987651 |
actgatgagatttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctcttagtgaaccaa |
1987750 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
212 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||| ||||||||| || |
|
|
| T |
1987751 |
tgagatcttccagattcatagatttcaaatctttggcctgagtgatttcagtgaccataggtctccacatacttggaagtcatctcaatatttttctgat |
1987850 |
T |
|
| Q |
213 |
tctatcatgagtagaatatgc |
233 |
Q |
| |
|
||| |||||||| |||||||| |
|
|
| T |
1987851 |
tctctcatgagtggaatatgc |
1987871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 28 - 224
Target Start/End: Complemental strand, 22960190 - 22959995
Alignment:
| Q |
28 |
tgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggt |
127 |
Q |
| |
|
||||| ||||| |||| ||||| |||||||||| |||||||||| ||||||| ||||| ||||||||||||||| ||||||||| |||| ||||||| |
|
|
| T |
22960190 |
tgagaagcttttaaggtaagtgattttaccttcctcactggtttatctccttaaagtataacttcatgagctcttagtgaacca-tgagttcttccaaag |
22960092 |
T |
|
| Q |
128 |
tcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagt |
224 |
Q |
| |
|
||| ||| |||||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||| ||||| || || |||||||||||||| |
|
|
| T |
22960091 |
tcaaagagtttaaatctttggcttgagtaattgcagtgaccataggtctccatatacttggaagacatcttagtatcttcctgattctatcatgagt |
22959995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0611 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: scaffold0611
Description:
Target: scaffold0611; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 209 - 1
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
209 |
tcatcatcagcaactgatgaactttgctgagatgctttcaaggaaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
110 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcag |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
109 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctaagtaattgcagtgaccataggtctccaaatacttggaagacatctcaa |
10 |
T |
|
| Q |
201 |
tatttttct |
209 |
Q |
| |
|
||||||||| |
|
|
| T |
9 |
tatttttct |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 148599 - 148363
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
148599 |
tcatcatcagctactgatgagctttgctgagatgctttcaaggtaagtgtttttactttcttcactggtttgtctccttgaagtacaacgtcatgagctc |
148500 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcag |
200 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| | |
|
|
| T |
148499 |
tcagtgaaccaatgagatcctctaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatcttaa |
148400 |
T |
|
| Q |
201 |
tatttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
148399 |
tatttttctgattctatcatgagtataatatgccttt |
148363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0254 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0254
Description:
Target: scaffold0254; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 6030 - 6254
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6030 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
6129 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
6130 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
6229 |
T |
|
| Q |
213 |
tctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||| |||||||| |||||||||||| |
|
|
| T |
6230 |
tctctcatgagtggaatatgccttt |
6254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 52982 - 53216
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
52982 |
tcatcatcagctactgatgagctttgatgagatgctttcaaggcaagtgttttcaccttcttcactagtttgtctccttgaagtataacttcatgagctc |
53081 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcag |
200 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
53082 |
tcagtgatccaatgagatcttcgaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccatatacttggaagacatctc-- |
53179 |
T |
|
| Q |
201 |
tatttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
53180 |
tatttttctgattctatcatgagtagaatatgccttt |
53216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313 (Bit Score: 173; Significance: 4e-93; HSPs: 2)
Name: scaffold0313
Description:
Target: scaffold0313; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 7648 - 7428
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7648 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
7549 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
7548 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
7449 |
T |
|
| Q |
213 |
tctatcatgagtagaatatgc |
233 |
Q |
| |
|
||| |||||||| |||||||| |
|
|
| T |
7448 |
tctctcatgagtggaatatgc |
7428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 11430 - 11210
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11430 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
11331 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || |
|
|
| T |
11330 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
11231 |
T |
|
| Q |
213 |
tctatcatgagtagaatatgc |
233 |
Q |
| |
|
||| |||||||| |||||||| |
|
|
| T |
11230 |
tctctcatgagtggaatatgc |
11210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 17097 - 16888
Alignment:
| Q |
14 |
ctgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaat |
113 |
Q |
| |
|
|||||||| |||| |||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
17097 |
ctgatgaagtttgttgagatgctttcaaggaaagtgattttacctttttcactggtttgtctttttgaagtacaacttcatgagctctcagtgaaccaat |
16998 |
T |
|
| Q |
114 |
gagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaatt |
213 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| ||||||| ||||||||| ||| |
|
|
| T |
16997 |
gagatcttcaaggttcatagattttaaatctttggcctgagtaattgca---tccataggtctccacatacttg-----catctcaatatttttctgatt |
16906 |
T |
|
| Q |
214 |
ctatcatgagtagaatat |
231 |
Q |
| |
|
|| |||||||| |||||| |
|
|
| T |
16905 |
ctttcatgagtggaatat |
16888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141 (Bit Score: 119; Significance: 6e-61; HSPs: 2)
Name: scaffold0141
Description:
Target: scaffold0141; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 27836 - 27670
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
27836 |
tcatcatcagctactgatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactggtttgtctccttgaagtataacttcatgagctc |
27737 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgac |
167 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
27736 |
tcaatgaaccaatgagatcttccaggttcatagattttaaatctttgatctgagtaattgtagtgac |
27670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 20506 - 20430
Alignment:
| Q |
161 |
cagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||| || || ||||| ||||| |||||||| |||||||||||| |
|
|
| T |
20506 |
cagtgaccataggtctccacattcttggaagacatcttagaatctttctgattctctcatgagtggaatatgccttt |
20430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 86976 - 87142
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
86976 |
tcatcatcagctactgatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactggtttgtctccttgaagtataacttcatgagctc |
87075 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgac |
167 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
87076 |
tcaatgaaccaatgagatcttccaggttcatagattttaaatctttgatctgagtaattgtagtgac |
87142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 28 - 224
Target Start/End: Original strand, 189005 - 189200
Alignment:
| Q |
28 |
tgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggt |
127 |
Q |
| |
|
||||| ||||| |||||||||| ||||||||| ||| |||||| ||||||| ||||| ||||||||||||||| ||||||||| |||| |||||| |
|
|
| T |
189005 |
tgagaagcttttaaggcaagtgattttacctttctcattggtttatctccttaaagtataacttcatgagctcttagtgaacca-tgagtacttccaaag |
189103 |
T |
|
| Q |
128 |
tcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagt |
224 |
Q |
| |
|
||| ||| |||||||||||||| ||||| ||||||||||||||||| |||| |||||||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
189104 |
tcaaagagtttaaatctttggcttgagtaattgcagtgaccataggcctccatgtacttggaagacatcttagtatcttcctaattctatcatgagt |
189200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0529 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0529
Description:
Target: scaffold0529; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 290 - 184
Alignment:
| Q |
127 |
ttcatagattttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgagtag |
226 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||| | |
|
|
| T |
290 |
ttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcattatttttcttattctttcatgagtgg |
191 |
T |
|
| Q |
227 |
aatatgc |
233 |
Q |
| |
|
||||||| |
|
|
| T |
190 |
aatatgc |
184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 258253 - 258166
Alignment:
| Q |
136 |
tttaaatctttggcctgagtgattgcagtgaccataggtgtccacatacttggaagacatctcagtatttttctaattctatcatgag |
223 |
Q |
| |
|
||||| |||||||| ||||||||||| || ||||||||| |||| | |||| |||||||| | ||||||||| ||||| ||||||| |
|
|
| T |
258253 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtttttgggagacatcttaatatttttctgattctgtcatgag |
258166 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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