View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3648_low_53 (Length: 230)
Name: NF3648_low_53
Description: NF3648
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3648_low_53 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 6743555 - 6743769
Alignment:
| Q |
1 |
aaaaacgaaaacaatgaaaaagcattcaaatgaataacctaaaaacaatggagtcagaactcctagacctaaattcatcatcaaaaccaccaccgccacc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
6743555 |
aaaaacgaaaacaatgaaaaagcattcaaatgaataacctaaaaacaatggagtcagaactccaagacctaaattcatcatcaaaaccaccaccgccacc |
6743654 |
T |
|
| Q |
101 |
agttcccgacgaccttcctcttctcaaacccatcaccaccgtcttcgcttccaacaccatcgacctcgagaacaaattctccccttacgttcgccgtgat |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6743655 |
agttcccgacgaccttcctcttctcaaacccatcaccaccgtcttcgcttccaacaccatcgacctcgagaacaaattctccccttacgttcgccgtgat |
6743754 |
T |
|
| Q |
201 |
gtttatggcacaatg |
215 |
Q |
| |
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||||||||||||||| |
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| T |
6743755 |
gtttatggcacaatg |
6743769 |
T |
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