View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3650_low_10 (Length: 299)
Name: NF3650_low_10
Description: NF3650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3650_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 291
Target Start/End: Original strand, 44856325 - 44856615
Alignment:
| Q |
1 |
aaccataatcctaaccatgtttggtaccaaccttgaagacttgtccccacccatatcttccatgtaaacagaatcaaagttgactcctttatcaactcta |
100 |
Q |
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| T |
44856325 |
aaccataatcctaaccatgtttggtaccaaccttgaagacttgtccccacccatatcttccatgtaaacagaatcaaagttgactcctttatcaactcta |
44856424 |
T |
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| Q |
101 |
aatatttgtaaacttggatgaactgaattagccaacaaatgaaccatccaaacactctttgaagcaacaaagaaagcttgcaatagtggttcagaccaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44856425 |
aatatttgtaaacttggatgaactgaattagccaacaaatgaaccatccaaacactctttgaagcaacaaagaaagcttgcaatagtggttcagaccaag |
44856524 |
T |
|
| Q |
201 |
ccctattccaacccaacatagcaacaatttcactcatttttctatcacaaaatctactaaaatcttcactaaaatgtcttgtccctttgct |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44856525 |
ccctattccaacccaacatagcaacaatttcactcatttttctatcacaaaatctactaaaatcttcactaaaatgtcttgtccctttgct |
44856615 |
T |
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