View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3650_low_22 (Length: 201)
Name: NF3650_low_22
Description: NF3650
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3650_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 50997680 - 50997848
Alignment:
| Q |
15 |
aagaagacacacactgtatataaaaacgagaaaattgtcactgagttgcacatcaatgaatttgatatccataaattgcagataaaaaatgaagggaaac |
114 |
Q |
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| T |
50997680 |
aagaagacacacactgtatataaaaacgagaaaattgtcactgagttgcacatcaatgaatttgatatccataaattgcagataaaaaatgaagggaaac |
50997779 |
T |
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| Q |
115 |
ctgaatcagctccagacattcttttctggcaatttacatcacacgcatggtaaggattagatgctttag |
183 |
Q |
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| T |
50997780 |
ctgaatcagctccagacattcttttctggcaatttacatcacacgcatggtaaggattagatgctttag |
50997848 |
T |
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