View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3651_high_28 (Length: 246)

Name: NF3651_high_28
Description: NF3651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3651_high_28
NF3651_high_28
[»] chr8 (44 HSPs)
chr8 (1-235)||(5274662-5274896)
chr8 (104-233)||(4154320-4154448)
chr8 (106-232)||(5915864-5915985)
chr8 (106-232)||(33113407-33113533)
chr8 (107-231)||(4154707-4154831)
chr8 (107-233)||(9620717-9620841)
chr8 (106-232)||(34834868-34834994)
chr8 (107-232)||(9608738-9608863)
chr8 (106-222)||(3038340-3038456)
chr8 (106-233)||(9309347-9309474)
chr8 (109-232)||(40518577-40518700)
chr8 (114-232)||(3669687-3669805)
chr8 (112-222)||(45121960-45122070)
chr8 (107-199)||(41972151-41972243)
chr8 (106-232)||(6876902-6877029)
chr8 (109-232)||(45122097-45122220)
chr8 (106-232)||(147443-147569)
chr8 (106-228)||(8918808-8918930)
chr8 (177-241)||(6731958-6732022)
chr8 (156-232)||(34835251-34835327)
chr8 (156-235)||(18372031-18372110)
chr8 (156-230)||(9483229-9483303)
chr8 (106-232)||(30359263-30359389)
chr8 (172-232)||(6651552-6651612)
chr8 (156-232)||(9482644-9482720)
chr8 (156-232)||(20870613-20870689)
chr8 (156-232)||(34835517-34835593)
chr8 (156-232)||(34835783-34835859)
chr8 (156-232)||(45122666-45122742)
chr8 (106-229)||(5420643-5420766)
chr8 (106-232)||(25561855-25561982)
chr8 (114-232)||(3670060-3670178)
chr8 (158-232)||(30359653-30359727)
chr8 (156-230)||(40579548-40579622)
chr8 (114-231)||(1014286-1014403)
chr8 (106-232)||(40518061-40518189)
chr8 (168-232)||(30441139-30441203)
chr8 (109-232)||(1513955-1514078)
chr8 (155-210)||(4715317-4715372)
chr8 (107-190)||(33831971-33832054)
chr8 (122-203)||(43398137-43398221)
chr8 (158-230)||(1013913-1013985)
chr8 (156-228)||(37544534-37544606)
chr8 (156-232)||(45121696-45121772)
[»] chr6 (39 HSPs)
chr6 (105-235)||(6071123-6071253)
chr6 (105-232)||(8481918-8482044)
chr6 (107-233)||(10074402-10074528)
chr6 (107-233)||(12092521-12092647)
chr6 (107-232)||(10911558-10911684)
chr6 (107-235)||(10074028-10074156)
chr6 (107-233)||(10073655-10073779)
chr6 (114-232)||(3409259-3409377)
chr6 (114-232)||(26544049-26544167)
chr6 (114-222)||(14748388-14748496)
chr6 (106-232)||(2579912-2580038)
chr6 (107-233)||(12085073-12085198)
chr6 (114-232)||(29518503-29518621)
chr6 (114-232)||(29518920-29519038)
chr6 (114-232)||(32741179-32741297)
chr6 (106-230)||(2578485-2578608)
chr6 (114-222)||(35210204-35210312)
chr6 (127-222)||(31714683-31714777)
chr6 (106-228)||(2377746-2377868)
chr6 (106-232)||(16107670-16107796)
chr6 (114-232)||(2378126-2378244)
chr6 (114-232)||(3058226-3058344)
chr6 (158-232)||(16454619-16454693)
chr6 (158-230)||(2578877-2578949)
chr6 (156-232)||(3415500-3415576)
chr6 (117-232)||(1950225-1950340)
chr6 (158-232)||(2843598-2843673)
chr6 (117-232)||(6999836-6999951)
chr6 (156-223)||(32460629-32460696)
chr6 (156-230)||(1846790-1846864)
chr6 (106-232)||(5832067-5832192)
chr6 (106-232)||(5958643-5958769)
chr6 (156-232)||(1127402-1127478)
chr6 (156-232)||(16454949-16455025)
chr6 (104-184)||(33605644-33605724)
chr6 (158-232)||(3409704-3409778)
chr6 (162-195)||(30618480-30618513)
chr6 (113-233)||(593748-593868)
chr6 (168-232)||(2579532-2579596)
[»] chr2 (51 HSPs)
chr2 (107-233)||(28531353-28531479)
chr2 (105-231)||(30323455-30323581)
chr2 (107-233)||(33561490-33561616)
chr2 (106-233)||(28254276-28254403)
chr2 (107-232)||(962591-962716)
chr2 (107-232)||(42514642-42514767)
chr2 (105-233)||(29873576-29873704)
chr2 (105-233)||(30313169-30313296)
chr2 (106-221)||(16542441-16542556)
chr2 (107-232)||(40679669-40679794)
chr2 (114-232)||(14745707-14745825)
chr2 (114-232)||(36178645-36178763)
chr2 (114-232)||(37105924-37106042)
chr2 (114-232)||(41283515-41283633)
chr2 (107-233)||(41678407-41678534)
chr2 (106-232)||(6421377-6421503)
chr2 (111-233)||(7598225-7598347)
chr2 (106-232)||(15880255-15880381)
chr2 (106-232)||(36005920-36006045)
chr2 (107-232)||(33953811-33953936)
chr2 (155-231)||(3594219-3594295)
chr2 (156-232)||(15511535-15511611)
chr2 (110-222)||(29874073-29874185)
chr2 (155-210)||(2336665-2336720)
chr2 (114-232)||(5542665-5542783)
chr2 (106-225)||(31468797-31468912)
chr2 (114-232)||(37106188-37106306)
chr2 (114-230)||(5543040-5543156)
chr2 (109-220)||(35580776-35580886)
chr2 (167-232)||(3673121-3673186)
chr2 (107-232)||(37632637-37632762)
chr2 (156-232)||(6422152-6422228)
chr2 (156-232)||(36178211-36178287)
chr2 (155-233)||(30312830-30312908)
chr2 (107-187)||(9231242-9231322)
chr2 (106-202)||(31899496-31899592)
chr2 (109-233)||(37894731-37894855)
chr2 (106-222)||(37895111-37895227)
chr2 (193-232)||(3672780-3672819)
chr2 (177-232)||(6421794-6421849)
chr2 (158-232)||(6713020-6713095)
chr2 (106-232)||(29676895-29677026)
chr2 (111-189)||(7598606-7598684)
chr2 (107-221)||(12910221-12910335)
chr2 (178-232)||(14745334-14745388)
chr2 (106-135)||(3672711-3672740)
chr2 (156-241)||(33731690-33731775)
chr2 (106-146)||(3673077-3673117)
chr2 (156-232)||(23346279-23346354)
chr2 (178-218)||(35580494-35580534)
chr2 (106-190)||(38796300-38796384)
[»] chr1 (51 HSPs)
chr1 (106-241)||(17294569-17294704)
chr1 (106-235)||(26661559-26661688)
chr1 (107-235)||(24600351-24600479)
chr1 (104-232)||(22793268-22793397)
chr1 (106-241)||(34364917-34365052)
chr1 (106-232)||(5320005-5320131)
chr1 (107-233)||(19283494-19283620)
chr1 (107-233)||(22077534-22077660)
chr1 (106-232)||(39066240-39066366)
chr1 (106-230)||(41156983-41157107)
chr1 (106-241)||(34364499-34364634)
chr1 (107-233)||(1188627-1188753)
chr1 (106-232)||(29798191-29798317)
chr1 (114-232)||(32594756-32594874)
chr1 (109-233)||(1187403-1187527)
chr1 (105-228)||(41157366-41157489)
chr1 (143-233)||(10351189-10351279)
chr1 (106-232)||(26661938-26662064)
chr1 (106-232)||(40082399-40082524)
chr1 (106-235)||(66509-66638)
chr1 (106-232)||(9955899-9956027)
chr1 (106-204)||(41184493-41184591)
chr1 (107-203)||(44685449-44685546)
chr1 (114-232)||(44290864-44290983)
chr1 (158-232)||(44043812-44043886)
chr1 (114-228)||(44290502-44290616)
chr1 (114-232)||(48588528-48588646)
chr1 (115-232)||(3550721-3550838)
chr1 (109-222)||(22077879-22077991)
chr1 (107-204)||(24132053-24132150)
chr1 (156-232)||(14318909-14318985)
chr1 (142-229)||(22077153-22077240)
chr1 (106-232)||(37556103-37556229)
chr1 (106-209)||(41142364-41142467)
chr1 (106-232)||(45839619-45839749)
chr1 (106-228)||(31767205-31767327)
chr1 (158-232)||(41759527-41759601)
chr1 (104-233)||(5996911-5997039)
chr1 (107-220)||(30630690-30630803)
chr1 (196-233)||(31973374-31973411)
chr1 (106-190)||(37850682-37850766)
chr1 (107-175)||(50469178-50469246)
chr1 (106-233)||(3875370-3875497)
chr1 (158-232)||(11977324-11977398)
chr1 (107-222)||(66137-66254)
chr1 (107-152)||(22077242-22077287)
chr1 (114-190)||(3537229-3537305)
chr1 (156-232)||(3537639-3537715)
chr1 (106-190)||(21378123-21378207)
chr1 (158-210)||(24448321-24448373)
chr1 (156-232)||(38804395-38804471)
[»] chr4 (58 HSPs)
chr4 (106-228)||(3341120-3341242)
chr4 (107-232)||(36629230-36629355)
chr4 (106-240)||(22027991-22028125)
chr4 (107-232)||(32941161-32941286)
chr4 (107-233)||(28034222-28034348)
chr4 (106-232)||(34646687-34646813)
chr4 (122-232)||(50630793-50630903)
chr4 (122-233)||(760197-760307)
chr4 (112-232)||(23556904-23557024)
chr4 (106-232)||(16888854-16888981)
chr4 (155-233)||(34544147-34544226)
chr4 (109-232)||(39404013-39404136)
chr4 (107-233)||(3244488-3244614)
chr4 (106-232)||(4955355-4955481)
chr4 (155-233)||(15841405-15841483)
chr4 (106-232)||(25483328-25483454)
chr4 (106-232)||(50002418-50002544)
chr4 (106-232)||(51768098-51768224)
chr4 (114-232)||(55933162-55933280)
chr4 (107-232)||(39792898-39793023)
chr4 (108-232)||(44620654-44620777)
chr4 (106-233)||(52884879-52885007)
chr4 (106-233)||(36608698-36608825)
chr4 (106-232)||(1731685-1731811)
chr4 (107-233)||(2740693-2740819)
chr4 (114-232)||(49880160-49880278)
chr4 (106-232)||(22028407-22028535)
chr4 (111-232)||(54017633-54017754)
chr4 (156-233)||(54936238-54936315)
chr4 (156-232)||(18932787-18932863)
chr4 (105-233)||(41707502-41707629)
chr4 (156-232)||(44620395-44620471)
chr4 (156-232)||(45496847-45496923)
chr4 (156-232)||(54108955-54109030)
chr4 (107-222)||(2741064-2741179)
chr4 (106-233)||(22183301-22183428)
chr4 (107-232)||(52884688-52884814)
chr4 (106-235)||(36572011-36572140)
chr4 (159-232)||(43827485-43827557)
chr4 (106-202)||(11348396-11348492)
chr4 (106-229)||(10245912-10246034)
chr4 (158-232)||(20826261-20826335)
chr4 (168-222)||(31691206-31691260)
chr4 (114-232)||(41370357-41370475)
chr4 (107-221)||(54741227-54741341)
chr4 (106-203)||(49076515-49076612)
chr4 (156-228)||(54108578-54108651)
chr4 (156-228)||(3340849-3340921)
chr4 (168-232)||(23817719-23817783)
chr4 (156-232)||(44621044-44621120)
chr4 (105-233)||(3700356-3700476)
chr4 (177-232)||(49302969-49303024)
chr4 (158-232)||(40067088-40067162)
chr4 (107-232)||(20825829-20825954)
chr4 (106-233)||(6876137-6876261)
chr4 (181-233)||(11197293-11197345)
chr4 (106-146)||(19504697-19504737)
chr4 (108-228)||(49076873-49076992)
[»] scaffold0078 (2 HSPs)
scaffold0078 (106-232)||(5349-5475)
scaffold0078 (181-241)||(5049-5109)
[»] chr7 (42 HSPs)
chr7 (106-232)||(1085656-1085782)
chr7 (106-233)||(7517572-7517699)
chr7 (106-232)||(45434628-45434754)
chr7 (106-235)||(7554017-7554146)
chr7 (107-240)||(8128473-8128606)
chr7 (106-232)||(30245069-30245195)
chr7 (114-232)||(37533051-37533168)
chr7 (107-233)||(37345909-37346037)
chr7 (106-233)||(4124127-4124254)
chr7 (106-233)||(30244262-30244389)
chr7 (106-232)||(23417-23543)
chr7 (106-232)||(22567079-22567204)
chr7 (106-235)||(34218071-34218200)
chr7 (117-230)||(37533406-37533519)
chr7 (106-222)||(22566712-22566828)
chr7 (106-232)||(16569188-16569314)
chr7 (106-232)||(16596348-16596474)
chr7 (106-232)||(24177427-24177553)
chr7 (114-232)||(29157565-29157683)
chr7 (154-232)||(30253532-30253610)
chr7 (158-231)||(6054604-6054677)
chr7 (156-232)||(11845233-11845309)
chr7 (106-241)||(36939764-36939899)
chr7 (106-209)||(41910657-41910760)
chr7 (106-237)||(43241487-43241618)
chr7 (117-232)||(20599317-20599434)
chr7 (106-184)||(30244693-30244771)
chr7 (106-232)||(45433233-45433359)
chr7 (106-222)||(118351-118467)
chr7 (156-228)||(19122773-19122845)
chr7 (106-232)||(1085288-1085415)
chr7 (107-202)||(28301613-28301708)
chr7 (106-232)||(40094814-40094940)
chr7 (106-232)||(45754708-45754833)
chr7 (183-231)||(23569043-23569091)
chr7 (177-232)||(9901706-9901761)
chr7 (156-231)||(14681552-14681627)
chr7 (109-232)||(36622955-36623078)
chr7 (183-232)||(28300293-28300342)
chr7 (106-231)||(36534825-36534950)
chr7 (181-233)||(21416180-21416232)
chr7 (107-151)||(37393057-37393101)
[»] chr3 (54 HSPs)
chr3 (155-235)||(39336007-39336087)
chr3 (107-226)||(46546371-46546490)
chr3 (106-232)||(12114602-12114728)
chr3 (107-220)||(21832395-21832508)
chr3 (109-210)||(39336291-39336392)
chr3 (106-232)||(15772846-15772972)
chr3 (106-232)||(37991017-37991143)
chr3 (106-232)||(43346831-43346957)
chr3 (123-232)||(39934995-39935104)
chr3 (106-232)||(32462940-32463067)
chr3 (106-233)||(39914244-39914371)
chr3 (105-232)||(54017856-54017983)
chr3 (106-232)||(32589696-32589821)
chr3 (106-232)||(37990679-37990805)
chr3 (106-232)||(42342428-42342554)
chr3 (107-233)||(47964557-47964683)
chr3 (107-233)||(47964954-47965080)
chr3 (107-232)||(35946515-35946640)
chr3 (110-233)||(1634353-1634477)
chr3 (114-230)||(39389070-39389186)
chr3 (106-241)||(29644933-29645068)
chr3 (106-233)||(53118014-53118140)
chr3 (114-232)||(22304569-22304687)
chr3 (106-232)||(25739465-25739591)
chr3 (106-232)||(52634668-52634793)
chr3 (168-222)||(52634994-52635048)
chr3 (106-230)||(15773184-15773308)
chr3 (109-241)||(29644612-29644744)
chr3 (106-232)||(45901705-45901832)
chr3 (178-228)||(4823719-4823769)
chr3 (107-233)||(9240142-9240268)
chr3 (106-231)||(54018239-54018364)
chr3 (107-222)||(33803302-33803417)
chr3 (156-235)||(41359802-41359881)
chr3 (105-232)||(44160585-44160711)
chr3 (110-204)||(7767382-7767476)
chr3 (124-230)||(42584864-42584970)
chr3 (106-232)||(49336727-49336853)
chr3 (106-232)||(53577356-53577482)
chr3 (106-232)||(31190009-31190127)
chr3 (104-233)||(45395692-45395821)
chr3 (107-222)||(33175711-33175829)
chr3 (168-232)||(42342130-42342194)
chr3 (106-232)||(3135113-3135237)
chr3 (177-232)||(22303699-22303754)
chr3 (105-151)||(12747873-12747919)
chr3 (184-226)||(16868429-16868471)
chr3 (155-221)||(25317199-25317265)
chr3 (117-213)||(32930690-32930787)
chr3 (182-222)||(17731954-17731994)
chr3 (182-222)||(19033185-19033225)
chr3 (180-232)||(22303995-22304047)
chr3 (156-216)||(33362349-33362409)
chr3 (181-233)||(53596542-53596594)
[»] chr5 (42 HSPs)
chr5 (107-232)||(41632775-41632900)
chr5 (109-233)||(26074607-26074731)
chr5 (107-222)||(36521946-36522061)
chr5 (107-233)||(36568606-36568732)
chr5 (110-232)||(40296355-40296477)
chr5 (156-232)||(9498694-9498770)
chr5 (105-201)||(31509614-31509710)
chr5 (114-232)||(6500823-6500940)
chr5 (107-233)||(26074185-26074311)
chr5 (107-233)||(36522276-36522402)
chr5 (106-222)||(299481-299597)
chr5 (106-232)||(11417017-11417141)
chr5 (122-233)||(38427556-38427666)
chr5 (107-233)||(1028556-1028682)
chr5 (106-232)||(15370091-15370217)
chr5 (106-232)||(25327927-25328053)
chr5 (114-232)||(27502076-27502194)
chr5 (106-232)||(34753065-34753191)
chr5 (107-232)||(13415800-13415925)
chr5 (156-233)||(26590949-26591026)
chr5 (117-221)||(2411010-2411114)
chr5 (106-222)||(6224188-6224304)
chr5 (106-222)||(12662702-12662818)
chr5 (156-232)||(33747813-33747889)
chr5 (114-233)||(624196-624315)
chr5 (114-232)||(6500451-6500568)
chr5 (156-222)||(18603170-18603236)
chr5 (114-232)||(32487394-32487511)
chr5 (106-232)||(36492257-36492383)
chr5 (104-235)||(19275522-19275649)
chr5 (156-232)||(3295385-3295460)
chr5 (157-233)||(13786040-13786116)
chr5 (107-222)||(24489256-24489369)
chr5 (122-222)||(41170642-41170742)
chr5 (114-233)||(623818-623937)
chr5 (106-232)||(26075201-26075328)
chr5 (110-232)||(3295055-3295176)
chr5 (158-232)||(15370446-15370520)
chr5 (142-235)||(31509759-31509853)
chr5 (175-233)||(36527134-36527192)
chr5 (106-230)||(42405638-42405762)
chr5 (181-233)||(13042606-13042658)
[»] scaffold0734 (2 HSPs)
scaffold0734 (106-230)||(5769-5898)
scaffold0734 (106-232)||(5388-5515)
[»] scaffold0702 (1 HSPs)
scaffold0702 (106-228)||(558-680)
[»] scaffold0391 (2 HSPs)
scaffold0391 (106-232)||(1146-1272)
scaffold0391 (161-233)||(1730-1802)
[»] scaffold0113 (1 HSPs)
scaffold0113 (103-235)||(39827-39959)


Alignment Details
Target: chr8 (Bit Score: 175; Significance: 2e-94; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 5274662 - 5274896
Alignment:
Q  1 atcgttttctgtttatacttctcttctaacaaaatcataatgacttaaagttaaatgtcttcatccactaaaaacacaaatgtttcatttgtgtcactgt 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||| |||||||||||| ||||||| |    
T  5274662 atcgttttctgtttatacttctcttctaacaaaatcataacgacttcaagtaaaatgtcttcatccactaaaaacacgaatgtttcatttctgtcactat 5274761  T
Q  101 ccgaattgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgcct 200  Q
    ||||||| ||||||||||||||||||||||||| ||| |||| ||| |||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  5274762 ccgaattattgtgtgcaagtatgagttatatgttctacattgaataaaaaaggagaggttgaacactttataaatgggaagacccataaaatcattgcct 5274861  T
Q  201 taagattttgagtaagagtgtgatgtctctctcgc 235  Q
    |||||||||||||||||||||||||||||| ||||    
T  5274862 taagattttgagtaagagtgtgatgtctctatcgc 5274896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 4154448 - 4154320
Alignment:
Q  104 aattgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaa 203  Q
    ||||||||||||||| | |||||||||||||||| ||  |||||||||   ||||||||||||||||||| ||||| |||||||||| ||||||||||||    
T  4154448 aattgttgtgtgcaaatgtgagttatatgtcctacatcagatagaaaagtggaggttgaacactttataagtgaga-gacccataaactcattgccttaa 4154350  T
Q  204 gattttgagtaagagtgtgatgtctctctc 233  Q
     |||||| ||||| ||||||||||||||||    
T  4154349 tattttgggtaagtgtgtgatgtctctctc 4154320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 5915864 - 5915985
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||||| |||||||| ||||||  | ||| ||||||||||||    ||||||||||||| |||||||||||||     
T  5915864 ttgttgtgtgcaagtgtgagttatatgtcctacattggata-aaaatgtaaagtttaacactttataa----gaggacccataaactcattgccttaagg 5915958  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  5915959 ttttgggtaagagtgtggtgtctctct 5915985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 33113533 - 33113407
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||||| || ||||| || |  | |||||||||   |||||| | |||||||||||||| ||||||||||||||    
T  33113533 ttgttgtgtacaagtttgagttatatgtcctacatcggataaaatagtaaaggttgaacgtcttataagtaagaggacccataaactcattgccttaaga 33113434  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  33113433 ttttgggtaagagtgtggtgtctctct 33113407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 4154831 - 4154707
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||| | ||  |||||||||   ||||||||||||||||||| ||| |||||||||||| ||||||||  ||| |    
T  4154831 tgttgtgtgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacactttataagtgaaaggacccataaactcattgccccaaggt 4154732  T
Q  207 tttgagtaagagtgtgatgtctctc 231  Q
    |||| |||||||||||  |||||||    
T  4154731 tttgggtaagagtgtggcgtctctc 4154707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 9620841 - 9620717
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||  | |   |||||||||  ||| ||||| |||||||||| |||||||||||||||| |||||||||||||||    
T  9620841 tgttgtgtgcaagtgtgagttatatgtctcacaacagatagaaaagtagaagttgatcactttataagtgagaggacccataaactcattgccttaagat 9620742  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||   ||||||| |||||||||||||    
T  9620741 ttt--ataagagtttgatgtctctctc 9620717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 34834868 - 34834994
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | |||||||| || |  | ||||| ||||| |||||| | ||| ||| |||||| |||||||||||||     
T  34834868 ttgttgtgtacaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagatgactcataaactcattgccttaagg 34834967  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  34834968 ttttgggtaagagtgtggtgtctctct 34834994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 9608738 - 9608863
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||  | ||||||||||| |||||| | ||| ||||||||||  |||  ||||||| |    
T  9608738 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccataaacccatcaccttaaggt 9608837  T
Q  207 tttgagtaagagtgtgatgtctctct 232  Q
    |||| ||| |||||||  ||||||||    
T  9608838 tttgggtatgagtgtggcgtctctct 9608863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 3038456 - 3038340
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | || ||||| || |  | |||||||||||||||||| | | ||||||||||||  ||||||||||||     
T  3038456 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaaaaggacccataaacccattgccttaagg 3038357  T
Q  206 ttttgagtaagagtgtg 222  Q
    ||||| |||||||||||    
T  3038356 ttttgggtaagagtgtg 3038340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 9309347 - 9309474
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | || ||||| || |  | | ||||||||| |||||| | ||||||||| |||| |||||||||||||     
T  9309347 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaatgttgaacaccttataagtaagaggacccttaaactcattgccttaagg 9309446  T
Q  206 ttttgagtaagagtgtgatgtctctctc 233  Q
    | | | ||||||||||| ||||||||||    
T  9309447 tgtcgggtaagagtgtggtgtctctctc 9309474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 40518577 - 40518700
Alignment:
Q  109 ttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattt 208  Q
    |||||| ||||| |||||||||||||| | ||  |||||||||  | ||||||||||| |||||||| ||||||||||||||  || || |||||| |||    
T  40518577 ttgtgttcaagtgtgagttatatgtcccacatcagatagaaaagtaaaggttgaacaccttataaataagaggacccataaacccaatgacttaaggttt 40518676  T
Q  209 tgagtaagagtgtgatgtctctct 232  Q
    || |||||||||||| ||| ||||    
T  40518677 tgggtaagagtgtgacgtcactct 40518700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 3669687 - 3669805
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | ||  |||| || |  | ||||||||||| |||||| | ||||||| |||||| ||||||||||||| ||||| ||    
T  3669687 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggt 3669786  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  3669787 aagagtgtggtgtctctct 3669805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 45122070 - 45121960
Alignment:
Q  112 tgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttga 211  Q
    ||||||||| |||||||||||||| | || | ||| || |  | |||||||||||||||||| | ||||||| |||||| |||||||||||||||||||     
T  45122070 tgtgcaagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagaggactcataaactcattgccttaagattttgg 45121971  T
Q  212 gtaagagtgtg 222  Q
    |||| ||||||    
T  45121970 gtaacagtgtg 45121960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 107 - 199
Target Start/End: Original strand, 41972151 - 41972243
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgcc 199  Q
    |||||||||||||| |||||||||||||| | || ||||||||||  | ||||||||||| |||||| ||| ||||||||||||  |||||||    
T  41972151 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgataggacccataaacccattgcc 41972243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 6877029 - 6876902
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatat-gtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    ||||||||||||||| |||||||||| |||| | || ||||| ||||  | ||||||||||| |||||||| ||| |||||||| | |||||| |||| |    
T  6877029 ttgttgtgtgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaacaccttataaataagatgacccatacactcattgtcttagg 6876930  T
Q  205 attttgagtaagagtgtgatgtctctct 232  Q
     ||||| ||||||||||| ||| |||||    
T  6876929 gttttgggtaagagtgtggtgtttctct 6876902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 45122220 - 45122097
Alignment:
Q  109 ttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattt 208  Q
    |||||||||||| |||||||||||||  | || ||||| || |  | ||||||||||| |||||| | |||| ||||||||| |||||  |||||| |||    
T  45122220 ttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattttcttaaggttt 45122121  T
Q  209 tgagtaagagtgtgatgtctctct 232  Q
    || ||||||||||| |||||||||    
T  45122120 tgggtaagagtgtggtgtctctct 45122097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 147443 - 147569
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    |||||| ||| |||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||||| ||||||||||||||   ||||||||||      
T  147443 ttgttgcgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataaataagaggacccataaacctattgccttaaag 147542  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||||||||||  ||||||||    
T  147543 ttttgggtaagagtgtggcgtctctct 147569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 228
Target Start/End: Complemental strand, 8918930 - 8918808
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| ||||||| |||||| | ||  ||||| | |  | |||||||||||||||||| | ||||||||||||||   |||| ||||||     
T  8918930 ttgttgtgtgcaagtgtgagttacatgtcccacatcagatagcagagtaaaggttgaacactttataagtaagaggacccataaacctattgacttaagg 8918831  T
Q  206 ttttgagtaagagtgtgatgtct 228  Q
    ||||| |||||||||||| ||||    
T  8918830 ttttgggtaagagtgtgacgtct 8918808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 6731958 - 6732022
Alignment:
Q  177 agaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctcgcctatgc 241  Q
    |||| ||||||||| ||||||||||||| ||||||||||||||||| ||||||||| || |||||    
T  6731958 agagaacccataaattcattgccttaaggttttgagtaagagtgtggtgtctctcttgcttatgc 6732022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 34835251 - 34835327
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | |||||||||||||| ||||||||||||  ||||| ||||||||||| |||| ||||    
T  34835251 aggttgaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactct 34835327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 18372110 - 18372031
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctcgc 235  Q
    ||||||||||| |||||| | |||||| ||||||| ||||||| ||||| ||||| ||||||||||| ||| ||||||||    
T  18372110 aggttgaacaccttataagtaagaggatccataaactcattgctttaaggttttgggtaagagtgtggtgtttctctcgc 18372031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 9483303 - 9483229
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctct 230  Q
    ||||||||||| |||||| | ||||||||||||||  ||||| |||||| ||||| ||||||||||| |||||||    
T  9483303 aggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctct 9483229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 30359263 - 30359389
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||  | || ||||| || |  | | ||||||||| ||||||   ||||||||||||||  ||| ||||||||     
T  30359263 ttgttgtgtacaagtgtgagttatatgtctcacatcggataaaagagtaaatgttgaacaccttataagcaagaggacccataaacccatagccttaagg 30359362  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  30359363 ttttgggtaagagtgtggtgtctctct 30359389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 6651552 - 6651612
Alignment:
Q  172 aaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    |||| |||| ||||||||| ||||||||||||| ||||| ||||||||||| |||||||||    
T  6651552 aaataagagaacccataaattcattgccttaaggttttgggtaagagtgtggtgtctctct 6651612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 9482720 - 9482644
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | ||||||||||||||  |||||||| |||||||||  |||||||||| | |||||||    
T  9482720 aggttgaacaccttataagtaagaggacccataaacccattgcctaaagattttgtataagagtgtggtatctctct 9482644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 20870689 - 20870613
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||  |||||| | ||||||||||||||  || |||||||||||||||  |||||||||| |||||||||    
T  20870689 aggttgaacatcttataagtaagaggacccataaacccactgccttaagattttggataagagtgtggtgtctctct 20870613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 34835517 - 34835593
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||| |||||| | |||||||||||||| ||||||||||||  ||||| ||||||||||| |||| ||||    
T  34835517 aggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactct 34835593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 34835783 - 34835859
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||| |||||| | |||||||||||||| ||||||||||||  ||||| ||||||||||| |||| ||||    
T  34835783 aggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtggtgtcactct 34835859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 45122666 - 45122742
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | |||||||||||||| |||||| |||||| ||||| ||| |||||||  ||||||||    
T  45122666 aggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtatgagtgtggcgtctctct 45122742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 5420643 - 5420766
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||| ||||||| ||  |||||||||| | || |||||||| |  | ||||||||||  |||||| | ||||||| ||||||  ||||||||||||     
T  5420643 ttgttgtatgcaagtgtgtattatatgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagaggactcataaacccattgccttaagg 5420742  T
Q  206 ttttgagtaagagtgtgatgtctc 229  Q
    ||||  |||||||||||| |||||    
T  5420743 ttttttgtaagagtgtgacgtctc 5420766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 25561982 - 25561855
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||| | ||||| |||||||||||||| | || ||||| || |  | | ||||||||| |||||| | |||||||||||||| |||||| ||||||     
T  25561982 ttgttgtctacaagtgtgagttatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagaggacccataaactcattgtcttaagg 25561883  T
Q  206 tttt-gagtaagagtgtgatgtctctct 232  Q
    |||| | ||||||||||||  |||||||    
T  25561882 ttttggggtaagagtgtgacatctctct 25561855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 3670060 - 3670178
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||| ||||| |||||| |  |||||||||||||   ||| ||||||| ||||| ||    
T  3670060 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtttaacaccttataagtatgaggacccataaacctatttccttaaggttttgggt 3670159  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  3670160 aagagtgtggtgtctctct 3670178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 30359653 - 30359727
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||| |||||| | ||||||| ||||||  |||  ||||||||||||| ||||||||||| |||||||||    
T  30359653 gttgaacaccttataagtaagaggactcataaacccataaccttaagattttgggtaagagtgtggtgtctctct 30359727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 40579622 - 40579548
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctct 230  Q
    ||||||||||| |||||| | |||||||||||||| | ||||| ||||| ||||  ||||||||||| |||||||    
T  40579622 aggttgaacaccttataagtaagaggacccataaacttattgctttaaggttttaggtaagagtgtggtgtctct 40579548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 1014403 - 1014286
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| ||||||||||||| || ||  |||| || |  | ||||||||||| |||||| | ||||||||| |||| || || ||||||  ||||| ||    
T  1014403 tgcaagtgtgagttatatgtcatacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccgtaaactcgttaccttaaagttttgggt 1014304  T
Q  214 aagagtgtgatgtctctc 231  Q
    ||||||||| ||||||||    
T  1014303 aagagtgtggtgtctctc 1014286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 40518061 - 40518189
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatg--agaggttgaacactttataaatgagaggacccataaaatcattgccttaa 203  Q
    ||||||||| ||||| |||||||||||| | | |||||||| ||||    | ||||||||||| |||||| | |  |||||||||||  || ||||||||    
T  40518061 ttgttgtgttcaagtgtgagttatatgttccacattggataaaaaaaagtaaaggttgaacaccttataagtaaatggacccataaacccaatgccttaa 40518160  T
Q  204 gattttgagtaagagtgtgatgtctctct 232  Q
    | ||||| |||||||||||  ||||||||    
T  40518161 ggttttgggtaagagtgtggcgtctctct 40518189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 30441139 - 30441203
Alignment:
Q  168 ttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    |||||| | ||||| ||||||||  |||||||||||| ||||| ||||||||||| |||||||||    
T  30441139 ttataagtaagagggcccataaacccattgccttaaggttttgggtaagagtgtggtgtctctct 30441203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 1514078 - 1513955
Alignment:
Q  109 ttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattt 208  Q
    |||||| |||||||||||||||| ||| | || ||||| || |  | ||||||||||| |||||| | ||||||||| ||||  |||  ||||||| |||    
T  1514078 ttgtgtacaagtatgagttatatatcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccttaaacccataaccttaaggttt 1513979  T
Q  209 tgagtaagagtgtgatgtctctct 232  Q
    || |||| |||||| | |||||||    
T  1513978 tgggtaaaagtgtggtatctctct 1513955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 4715317 - 4715372
Alignment:
Q  155 gaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttg 210  Q
    ||||||||||||||||||||||||| || | ||||| |||||  ||||||||||||    
T  4715317 gaggttgaacactttataaatgagacgatctataaactcattatcttaagattttg 4715372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 33831971 - 33832054
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaa 190  Q
    |||||||||||||| |||||||||||||  |  ||| | ||||||  ||| |||||||||||||||| | |||||||| |||||    
T  33831971 tgttgtgtgcaagtgtgagttatatgtctcacgttgaagagaaaagtagaagttgaacactttataagtaagaggacctataaa 33832054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 43398221 - 43398137
Alignment:
Q  122 tgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatga---gaggacccataaaatcattgccttaa 203  Q
    |||||||||| ||  |||| ||||||||||  | ||||||||||| |||||||| |   ||||||||||||| ||||||||||||    
T  43398221 tgagttatatatctcatatcggatagaaaagtaaaggttgaacaccttataaataagaggaggacccataaattcattgccttaa 43398137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 1013985 - 1013913
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctct 230  Q
    |||||||||  ||||| | |||||||| |||||  ||||||||||   ||||||||||||||||| |||||||    
T  1013985 gttgaacaccctataagtaagaggaccaataaacccattgccttagagttttgagtaagagtgtgttgtctct 1013913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 37544606 - 37544534
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtct 228  Q
    ||||||||||| ||||||   ||||||||||||||  |||| | ||||| ||||| ||||||||||| |||||    
T  37544606 aggttgaacacattataagaaagaggacccataaatccattactttaaggttttgggtaagagtgtggtgtct 37544534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 45121772 - 45121696
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||| ||| |||||| | |||||| |||||||   |  |||||||| ||||||||||||||||||| |||||||    
T  45121772 aggttgatcaccttataagtaagaggatccataaacctacagccttaaggttttgagtaagagtgtgatatctctct 45121696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 6071123 - 6071253
Alignment:
Q  105 attgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||||||||||| |||||||||||||| | |||| ||||||||   ||||||||||||||||||| ||||| || ||||||| |||||||||||||    
T  6071123 attgttgtgtgcaagtgtgagttatatgtcccacattgaatagaaaagtggaggttgaacactttataagtgagatgatccataaactcattgccttaag 6071222  T
Q  205 attttgagtaagagtgtgatgtctctctcgc 235  Q
    ||||||  ||||||||||  |||||||||||    
T  6071223 attttggataagagtgtggcgtctctctcgc 6071253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 232
Target Start/End: Original strand, 8481918 - 8482044
Alignment:
Q  105 attgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||||||||||| |||||||||||||| | ||  |||| ||||   ||||||||||||||||||||||||| ||| |||||| |||||||||||||    
T  8481918 attgttgtgtgcaagtgtgagttatatgtcc-acatcagatataaaagtggaggttgaacactttataaatgagatgactcataaactcattgccttaag 8482016  T
Q  205 attttgagtaagagtgtgatgtctctct 232  Q
    |||||| ||||||||||| |||||||||    
T  8482017 attttgggtaagagtgtggtgtctctct 8482044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 10074528 - 10074402
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| ||||||| | |||| | || ||||||||||  | ||||||||||| |||||| | |||||||||||||| ||||||||||||| |    
T  10074528 tgttgtgtgcaagtgtgagttagaggtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggt 10074429  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||| ||||||||||| ||||||||||    
T  10074428 tttgggtaagagtgtggtgtctctctc 10074402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 12092647 - 12092521
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||  || |||| |||||| | || ||||||||||   |||||||| |||||||||| |||||||| ||||||| ||||||||||||| |    
T  12092647 tgttgtgtgcaagggtgtgttagatgtcccacatcggatagaaaagtggaggttgagcactttataagtgagaggatccataaactcattgccttaaggt 12092548  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    ||||||||||| |||| ||||||||||    
T  12092547 tttgagtaagactgtggtgtctctctc 12092521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 10911558 - 10911684
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatg-agaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    |||||| ||||||| |||||||||||||||| ||  |||| |||| | | ||||||||||| |||||| | ||||||| |||||| ||||||||||||      
T  10911558 tgttgtatgcaagtgtgagttatatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaag 10911657  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    |||||| ||||||||||||||||||||    
T  10911658 ttttgaataagagtgtgatgtctctct 10911684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 235
Target Start/End: Complemental strand, 10074156 - 10074028
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||  |||||||||| ||| | || ||||||||||  | | ||||||||| |||||| | ||||||||||||||  |||||||||||| |    
T  10074156 tgttgtgtgcaagggtgagttatatatcccacatcggatagaaaagtaaacgttgaacaccttataagtaagaggacccataaacccattgccttaaggt 10074057  T
Q  207 tttgagtaagagtgtgatgtctctctcgc 235  Q
    |||| |||| |||||| ||||||||||||    
T  10074056 tttgggtaaaagtgtggtgtctctctcgc 10074028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 10073779 - 10073655
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| | |||||||||||| | || |||  |||||  | ||||||||||| |||||| | |||||| ||||||| |||||| ||||||||    
T  10073779 tgttgtgtgcaagtgttagttatatgtcccacatcgga--gaaaagtaaaggttgaacaccttataagtaagaggatccataaactcattggcttaagat 10073682  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||| ||||||||||| ||||||||||    
T  10073681 tttgggtaagagtgtggtgtctctctc 10073655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 3409259 - 3409377
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | ||  |||| || |  | ||||||||||| |||||| | |||||||||||||| ||||||||||||| ||||| ||    
T  3409259 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggt 3409358  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  3409359 aagagtgtggtgtctctct 3409377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 26544049 - 26544167
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  ||  |||||||| ||||||||    
T  26544049 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagaggacccataaacccaccgccttaaggttttgagt 26544148  T
Q  214 aagagtgtgatgtctctct 232  Q
    |||||||||||||||||||    
T  26544149 aagagtgtgatgtctctct 26544167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 222
Target Start/End: Complemental strand, 14748496 - 14748388
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||||| |||||||||||||| ||||||| ||||| ||||| ||    
T  14748496 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacccataaactcattgcgttaaggttttgggt 14748397  T
Q  214 aagagtgtg 222  Q
    |||||||||    
T  14748396 aagagtgtg 14748388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 2580038 - 2579912
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  ||  ||||||||     
T  2580038 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagaggacccataaacccacagccttaagg 2579939  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||||| |||| |||||||||    
T  2579938 ttttgggtaagaatgtggtgtctctct 2579912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 12085198 - 12085073
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||| ||||||||| |||||||||||||||  ||  |||||||| || ||| |||||||||||||||  || ||||| ||||||| ||| |||||||| |    
T  12085198 tgttttgtgcaagtgtgagttatatgtcctgcatcagatagaaagtg-gagtttgaacactttataatagaaaggactcataaaaccatggccttaaggt 12085100  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||| |||||||||||  |||||||||    
T  12085099 tttgggtaagagtgtggcgtctctctc 12085073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 29518503 - 29518621
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  |||| ||||||| ||||| ||    
T  29518503 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggt 29518602  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  29518603 aagagtgtggtgtctctct 29518621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 29518920 - 29519038
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  |||| ||||||| ||||| ||    
T  29518920 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggt 29519019  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  29519020 aagagtgtggtgtctctct 29519038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 32741179 - 32741297
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  |||| ||||||| ||||| ||    
T  32741179 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggt 32741278  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  32741279 aagagtgtggtgtctctct 32741297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 230
Target Start/End: Complemental strand, 2578608 - 2578485
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | |  ||||| || |  | |||||||||||||||||| | ||||||||||||||  ||| ||||||||     
T  2578608 ttgttgtgtacaagtgtgagttatatgtcccacac-ggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccatagccttaagg 2578510  T
Q  206 ttttgagtaagagtgtgatgtctct 230  Q
    ||||| ||||||||||| |||||||    
T  2578509 ttttgggtaagagtgtggtgtctct 2578485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 35210204 - 35210312
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||  | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||| |||||||||||| ||||| ||    
T  35210204 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaaccattgccttaaggttttgggt 35210303  T
Q  214 aagagtgtg 222  Q
    |||||||||    
T  35210304 aagagtgtg 35210312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 222
Target Start/End: Original strand, 31714683 - 31714777
Alignment:
Q  127 tatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtg 222  Q
    ||||||||||| || ||||||||||   ||||||||||  | ||||| ||||||||||||| || ||||||||||||| |||||||||||||||||    
T  31714683 tatatgtcctacatcggatagaaaagtggaggttgaacgttatataa-tgagaggacccattaactcattgccttaaggttttgagtaagagtgtg 31714777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 228
Target Start/End: Original strand, 2377746 - 2377868
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||  ||||| |||||||||||||| | || || || || |  | ||||||||||| |||||| | ||||||||||||||  ||||||||||||     
T  2377746 ttgttgtgcacaagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 2377845  T
Q  206 ttttgagtaagagtgtgatgtct 228  Q
    ||||| ||||||||||| |||||    
T  2377846 ttttgggtaagagtgtggtgtct 2377868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 16107670 - 16107796
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| ||||||||||||   | || ||||| ||||  | ||||| ||||| |||||| | ||||||| ||||||  ||||||||||||     
T  16107670 ttgttgtgtacaagtgtgagttatatgtgtcacatcggataaaaaagtaaaggttaaacaccttataagtaagaggactcataaacccattgccttaagg 16107769  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  16107770 ttttgggtaagagtgtggtgtctctct 16107796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 2378126 - 2378244
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  |||| ||||||| ||||  ||    
T  2378126 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttaggt 2378225  T
Q  214 aagagtgtgatgtctctct 232  Q
    |||| |||| |||||||||    
T  2378226 aagaatgtggtgtctctct 2378244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 3058226 - 3058344
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| | |||||||||||| | || ||||| || |  | ||||||||||| |||||| |  ||||| |||||||  |||||||||||| ||||| ||    
T  3058226 tgcaagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtatgaggatccataaacccattgccttaaggttttgggt 3058325  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  3058326 aagagtgtggtgtctctct 3058344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 16454619 - 16454693
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||| |||||| | ||||||||||||||  ||||||||||||||||||  ||||||||||  ||||||||    
T  16454619 gttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtggcgtctctct 16454693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 2578949 - 2578877
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctct 230  Q
    |||||| || |||||||| |||||| ||||||| ||||| ||||||| ||||| ||||||||||| |||||||    
T  2578949 gttgaataccttataaataagaggatccataaactcattaccttaaggttttgggtaagagtgtggtgtctct 2578877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 3415500 - 3415576
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    |||||||||||  ||||| | ||||||||||||||  |||||||||||| ||||  ||||||||||| |||||||||    
T  3415500 aggttgaacaccatataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctct 3415576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 1950340 - 1950225
Alignment:
Q  117 aagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaag 216  Q
    |||| |||||||||||||| | || ||||| || |  | ||||||||||| ||| || | |||||| |||||||   | ||||||||| |||||||||||    
T  1950340 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttacaagtaagaggagccataaatctaatgccttaaggttttgagtaag 1950241  T
Q  217 agtgtgatgtctctct 232  Q
    ||||||| ||||||||    
T  1950240 agtgtgacgtctctct 1950225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 2843598 - 2843673
Alignment:
Q  158 gttgaacactttataaatgagaggaccc-ataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||| |||||| | ||||||||| ||||| ||||||||||||| ||||| ||||||||||| | |||||||    
T  2843598 gttgaacaccttataagtaagaggaccccataaactcattgccttaaggttttgggtaagagtgtggtatctctct 2843673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 6999951 - 6999836
Alignment:
Q  117 aagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaag 216  Q
    |||| |||||||||||||||| || ||||| ||||  | | ||||||||| |||||  | |||||| ||||||| ||| ||||||||| |||||  ||||    
T  6999951 aagtgtgagttatatgtcctacatcggataaaaaagtaaaagttgaacaccttatatgtaagaggatccataaactcactgccttaaggttttggataag 6999852  T
Q  217 agtgtgatgtctctct 232  Q
    ||||||  ||||||||    
T  6999851 agtgtggcgtctctct 6999836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 223
Target Start/End: Complemental strand, 32460696 - 32460629
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtga 223  Q
    ||||||||||| |||||| | ||||||| ||||||  |||||||||||| ||||| ||||||||||||    
T  32460696 aggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtga 32460629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 1846790 - 1846864
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctct 230  Q
    ||||||||||| |||||| | |||| |||||||||  |||||||||||| |||||  |||||||||| |||||||    
T  1846790 aggttgaacaccttataagtaagagcacccataaatccattgccttaaggttttggataagagtgtggtgtctct 1846864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 5832192 - 5832067
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||  ||||| | |||||||||||| | |||||||| || |  | ||||||||||| |||||| | ||||||||||||||  ||   ||||||||    
T  5832192 ttgttgtgcacaagtgtaagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagtaagaggacccataaagcca-ccccttaaga 5832094  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||| |||||| |||||||||    
T  5832093 ttttgggtaaaagtgtggtgtctctct 5832067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 5958769 - 5958643
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    |||| |||||||| | ||||||||||||  || || ||||| || |  | ||||||||||| |||||||| |||| || |||||| |||||| |||||      
T  5958769 ttgtggtgtgcaattgtgagttatatgtgttacatcggataaaacagtaaaggttgaacaccttataaataagagaactcataaactcattgtcttaaag 5958670  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |  ||||||||||||||||||    
T  5958669 ttttgggatagagtgtgatgtctctct 5958643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 1127402 - 1127478
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | ||||||| ||||||  |||| ||||||| ||||| |||||||||||  ||||||||    
T  1127402 aggttgaacaccttataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtggcgtctctct 1127478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 16454949 - 16455025
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | | ||||||||||||   ||||||||||| ||||| |||||||||||  ||||||||    
T  16454949 aggttgaacaccttataagtaataggacccataaacctattgccttaaggttttgggtaagagtgtggcgtctctct 16455025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 33605644 - 33605724
Alignment:
Q  104 aattgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacc 184  Q
    ||||||||||||||||| |||| ||||||||  | ||  |||||||||   ||||||||||||||||||| ||||| ||||    
T  33605644 aattgttgtgtgcaagtgtgagctatatgtctcacatcagatagaaaagtggaggttgaacactttataattgagaagacc 33605724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 3409704 - 3409778
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||  |||||| | ||||||||||||||  ||||||||| |  ||||| ||||||||||| |||||||||    
T  3409704 gttgaacatcttataagtaagaggacccataaacccattgcctttattttttgggtaagagtgtggtgtctctct 3409778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 30618513 - 30618480
Alignment:
Q  162 aacactttataaatgagaggacccataaaatcat 195  Q
    ||||||||||||||||||| ||||||||||||||    
T  30618513 aacactttataaatgagagaacccataaaatcat 30618480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 233
Target Start/End: Complemental strand, 593868 - 593748
Alignment:
Q  113 gtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgag 212  Q
    |||||||| |||||| ||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||| ||||||   | ||||||||| ||||| |    
T  593868 gtgcaagtgtgagttgtatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaaccgactgccttaaggttttggg 593769  T
Q  213 taagagtgtgatgtctctctc 233  Q
    ||| |||||| | ||||||||    
T  593768 taatagtgtggtatctctctc 593748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 2579596 - 2579532
Alignment:
Q  168 ttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    |||||| | ||||| |||||||| ||||||||||||| ||||| |||| ||| || |||||||||    
T  2579596 ttataagtaagagggcccataaactcattgccttaaggttttgggtaaaagtatggtgtctctct 2579532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 28531479 - 28531353
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||| | || ||||||||||  | ||||||||||| |||||| | ||||| |||||||| |||||||||||||||    
T  28531479 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaagaggtcccataaactcattgccttaagat 28531380  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||| ||||||||||| || |||||||    
T  28531379 tttgggtaagagtgtggtgactctctc 28531353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 30323455 - 30323581
Alignment:
Q  105 attgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||||||||||| || ||||||||||| | ||  ||||||||||  |||||||||||||||| || |||||||||| ||||| |||||||||||||    
T  30323455 attgttgtgtgcaagtgtgtgttatatgtcccaaatcagatagaaaattggaggttgaacactttagaagtgagaggacctataaactcattgccttaag 30323554  T
Q  205 attttgagtaagagtgtgatgtctctc 231  Q
     ||||| |||||||||||  |||||||    
T  30323555 gttttgggtaagagtgtggcgtctctc 30323581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 33561616 - 33561490
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||| | | ||  |||||||||   |||||| |||||||||||| |||||||||||||||| |||||| |||||| |    
T  33561616 tgttgtgtgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaacactttataagtgagaggacccataaactcattgtcttaaggt 33561517  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||| ||||||||||||| ||||||||    
T  33561516 tttgggtaagagtgtgatatctctctc 33561490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 28254403 - 28254276
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||| ||| ||| |||||||||| | || ||||||||||  | ||||||||||  |||||| | |||||||||||||| |||||||||||||     
T  28254403 ttgttgtgtgccagtgtgacttatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgccttaagg 28254304  T
Q  206 ttttgagtaagagtgtgatgtctctctc 233  Q
    ||||| ||||||||||| ||||||||||    
T  28254303 ttttgggtaagagtgtggtgtctctctc 28254276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 962591 - 962716
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||| ||||||| |||||||||||||| | || ||||||||||  | ||||||||||| |||||| ||||||||||||||||  ||||| |||||| |    
T  962591 tgttgtatgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacccataaacccattgtcttaaggt 962690  T
Q  207 tttgagtaagagtgtgatgtctctct 232  Q
    |||| ||||||||||| |||| ||||    
T  962691 tttgggtaagagtgtgttgtcactct 962716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 42514642 - 42514767
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||| ||||||| |||||||||||||||| ||  |||||||||  | ||||||||||| |||||| | ||||||||||||||  ||| ||||||||||    
T  42514642 tgttgtatgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccatcgccttaagat 42514741  T
Q  207 tttgagtaagagtgtgatgtctctct 232  Q
    |||| |||||||||||  ||||||||    
T  42514742 tttgggtaagagtgtggcgtctctct 42514767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 29873704 - 29873576
Alignment:
Q  105 attgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||||||||||  || |||| |||||| | ||  |||||||||   ||||||||||| ||||||| || |||||| |||||| |||||||||||||    
T  29873704 attgttgtgtgcaagggtgtgttacatgtcccacatcagatagaaaagtggaggttgaacattttataagtgggaggactcataaactcattgccttaag 29873605  T
Q  205 attttgagtaagagtgtgatgtctctctc 233  Q
     |||||||||||||||||| |||||||||    
T  29873604 gttttgagtaagagtgtgacgtctctctc 29873576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 233
Target Start/End: Original strand, 30313169 - 30313296
Alignment:
Q  105 attgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||||||||||  || ||||||||||  | || ||||||||||   |||||||||||||| |||| |||||||||||| ||| |||||||||||||    
T  30313169 attgttgtgtgcaagcgtgtgttatatgtctcacatcggatagaaaagtggaggttgaacactt-ataagtgagaggacccaaaaactcattgccttaag 30313267  T
Q  205 attttgagtaagagtgtgatgtctctctc 233  Q
    |||||| |||||||||||  |||||||||    
T  30313268 attttgggtaagagtgtggcgtctctctc 30313296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 221
Target Start/End: Original strand, 16542441 - 16542556
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| ||||||||| |||| | || ||||| || |  | ||||||||||| |||||||| |||||||  ||||| ||||||||||||||    
T  16542441 ttgttgtgtgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacttataaactcattgccttaaga 16542540  T
Q  206 ttttgagtaagagtgt 221  Q
    ||||||||||||||||    
T  16542541 ttttgagtaagagtgt 16542556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 232
Target Start/End: Complemental strand, 40679794 - 40679669
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||| | |||||||||||||| |||| ||||||||||  |  |||||||||| |||||| | |||| |||||||||  ||| ||||||||||    
T  40679794 tgttgtgtgcaaatgtgagttatatgtcccatatcggatagaaaagtaagggttgaacaccttataagtaagagaacccataaacccatcgccttaagat 40679695  T
Q  207 tttgagtaagagtgtgatgtctctct 232  Q
    |||| |||||||||||  ||||||||    
T  40679694 tttgggtaagagtgtggcgtctctct 40679669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 14745825 - 14745707
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | |||||||| || |  | ||||||||||| |||||| | ||||||||||||||  |||||||||||| ||||| ||    
T  14745825 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 14745726  T
Q  214 aagagtgtgatgtctctct 232  Q
    |||||||||  ||||||||    
T  14745725 aagagtgtggcgtctctct 14745707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 36178763 - 36178645
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  |||||||||||| ||||| ||    
T  36178763 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 36178664  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  36178663 aagagtgtggtgtctctct 36178645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 37105924 - 37106042
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || | ||| || |  | ||||||||||| |||||| | || ||||||||||| ||||||||||||||||||| ||    
T  37105924 tgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagtaaggggacccataaactcattgccttaagattttgggt 37106023  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  37106024 aagagtgtggtgtctctct 37106042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 41283633 - 41283515
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| |||| ||||| || |  | ||||||||||| |||||| | |||||||||||||| ||||||||||||| ||||  ||    
T  41283633 tgcaagtgtgagttatatgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttaggt 41283534  T
Q  214 aagagtgtgatgtctctct 232  Q
    |||||||||  ||||||||    
T  41283533 aagagtgtggcgtctctct 41283515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 41678534 - 41678407
Alignment:
Q  107 tgttgtgtgcaagtatgagttatat--gtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||||||||| ||||||||||  |||  | ||  ||||||||| | |||||| |||||||||||| ||||||||||||| ||| | ||||||||||    
T  41678534 tgttgtgtgcaagtgtgagttatatatgtctcacatcagatagaaaaggggaggttaaacactttataagtgagaggacccat-aaacctttgccttaag 41678436  T
Q  205 attttgagtaagagtgtgatgtctctctc 233  Q
     |||||||||||||||| | |||||||||    
T  41678435 gttttgagtaagagtgtaacgtctctctc 41678407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 6421377 - 6421503
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||  ||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||| |||||| |||||||||| ||     
T  6421377 ttgttgtgcacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttgagg 6421476  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  6421477 ttttgggtaagagtgtggtgtctctct 6421503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 233
Target Start/End: Original strand, 7598225 - 7598347
Alignment:
Q  111 gtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttg 210  Q
    |||||||||| ||| |||||||| ||| || | ||||||||  | ||||| ||||| |||||||| |||||||||||||| |||| |||||||| |||||    
T  7598225 gtgtgcaagtgtgaattatatgttctacatcgaatagaaaagtaaaggttcaacaccttataaataagaggacccataaactcatagccttaaggttttg 7598324  T
Q  211 agtaagagtgtgatgtctctctc 233  Q
     |||||| | || ||||||||||    
T  7598325 ggtaagaatatggtgtctctctc 7598347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 15880255 - 15880381
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||| | | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  ||||||||||||     
T  15880255 ttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 15880354  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||||||||||  ||||||||    
T  15880355 ttttgggtaagagtgtggcgtctctct 15880381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 36006045 - 36005920
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | || | ||||||| | | || |||||||| |||||| | |||||||||||||| |||||||||||||     
T  36006045 ttgttgtgtacaagtgtgagttatatgtcccacatcgaatagaaagtaaaag-ttgaacaccttataagtaagaggacccataaactcattgccttaagg 36005947  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||| ||||||  ||||||||    
T  36005946 ttttgggtaaaagtgtggcgtctctct 36005920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 232
Target Start/End: Complemental strand, 33953936 - 33953811
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||| | ||||||||| |||| | ||  |||||||||   ||||||||||||| ||||| ||||||||||||||||    ||||||||| ||    
T  33953936 tgttgtgtgcaaatgtgagttataagtcccacatcagatagaaaagtggaggttgaacactatataagtgagaggacccataaacctgttgccttaaaat 33953837  T
Q  207 tttgagtaagagtgtgatgtctctct 232  Q
    |||| |||||||||||| ||| ||||    
T  33953836 tttgggtaagagtgtgacgtccctct 33953811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 3594295 - 3594219
Alignment:
Q  155 gaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctc 231  Q
    ||||| ||||||||||||| ||| |||| |||||||  |||||| ||||||||||||||||||||||||| ||||||    
T  3594295 gaggtcgaacactttataagtgataggatccataaacacattgctttaagattttgagtaagagtgtgatatctctc 3594219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 15511611 - 15511535
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | ||||||||||||||  ||||| |||||||||||| ||||||||||| |||||||||    
T  15511611 aggttgaacacgttataagtaagaggacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctct 15511535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 222
Target Start/End: Complemental strand, 29874185 - 29874073
Alignment:
Q  110 tgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagatttt 209  Q
    ||||| ||||| || ||||||||||| | ||  |||||||||   ||||||||||||||||||| || |||||||||||||  |||||||||||| ||||    
T  29874185 tgtgtacaagtgtgtgttatatgtcccacatcagatagaaaagtggaggttgaacactttataattgggaggacccataaacccattgccttaaggtttt 29874086  T
Q  210 gagtaagagtgtg 222  Q
    |  ||||||||||    
T  29874085 ggataagagtgtg 29874073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 210
Target Start/End: Original strand, 2336665 - 2336720
Alignment:
Q  155 gaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttg 210  Q
    ||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  2336665 gaggttgaacactttataagtgagaggacccataaattcaatgccttaagattttg 2336720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 5542783 - 5542665
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| |||| | ||| || |  | ||||||||||| |||||| | ||||||||||||||   ||||||||||| ||||  ||    
T  5542783 tgcaagtgtgagttatatgtcccatatcgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggtttttggt 5542684  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  5542683 aagagtgtggtgtctctct 5542665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 31468912 - 31468797
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | || ||||| || |  | |||||||| |  ||||||    ||||||||||||| |||||||||||||     
T  31468912 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaatatcttataa----gaggacccataaactcattgccttaagg 31468817  T
Q  206 ttttgagtaagagtgtgatg 225  Q
    ||||| ||||||||||||||    
T  31468816 ttttgggtaagagtgtgatg 31468797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 37106188 - 37106306
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  |||| ||||||| ||||| ||    
T  37106188 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccatttccttaaggttttgggt 37106287  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| ||| |||||    
T  37106288 aagagtgtggtgtttctct 37106306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 230
Target Start/End: Complemental strand, 5543156 - 5543040
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | ||  |||| || |  | ||||||||||| |||||| | |||||| |||||||   ||||||||||||||||| ||    
T  5543156 tgcaagtgtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggatccataaacctattgccttaagattttgggt 5543057  T
Q  214 aagagtgtgatgtctct 230  Q
    ||||||||| |||||||    
T  5543056 aagagtgtggtgtctct 5543040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 35580886 - 35580776
Alignment:
Q  109 ttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattt 208  Q
    |||||||||||| |||||||||||||| | || ||||| || |  | | ||||||||| |||||| |||||||| |||||||  |||||||||||| |||    
T  35580886 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaacaataaatgttgaacaccttataagtgagagga-ccataaacccattgccttaaggttt 35580788  T
Q  209 tgagtaagagtg 220  Q
    || |||||||||    
T  35580787 tgggtaagagtg 35580776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 3673121 - 3673186
Alignment:
Q  167 tttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||| | |||||| ||||||| ||||||| |||||||||||  ||||||||||||||||||||    
T  3673121 tttataagtaagaggatccataaactcattgctttaagattttggctaagagtgtgatgtctctct 3673186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 232
Target Start/End: Complemental strand, 37632762 - 37632637
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||||| || ||||| || |  | |||||  ||| ||||||| | ||||||||||||||  |||  | ||||| |    
T  37632762 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggtttgacattttataagtaagaggacccataaacccataactttaaggt 37632663  T
Q  207 tttgagtaagagtgtgatgtctctct 232  Q
    |||| ||||||||||| ||| |||||    
T  37632662 tttgggtaagagtgtggtgtatctct 37632637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 6422152 - 6422228
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | ||||||||||||||  ||| |||||||| ||||  ||||||||||| |||||||||    
T  6422152 aggttgaacacattataattaagaggacccataaacccatagccttaaggttttaggtaagagtgtggtgtctctct 6422228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 36178287 - 36178211
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | || | |||||||||  |||||||||||||||||| ||||||||||| || ||||||    
T  36178287 aggttgaacaccttataagtaagggaacccataaacccattgccttaagattttgggtaagagtgtggtgcctctct 36178211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 30312830 - 30312908
Alignment:
Q  155 gaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctc 233  Q
    ||||||||||||||||||| | ||| |||||||||| | ||| ||||||| ||||| |||| ||||||  |||||||||    
T  30312830 gaggttgaacactttataacttagatgacccataaacttatttccttaaggttttgggtaaaagtgtgtagtctctctc 30312908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 9231242 - 9231322
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccat 187  Q
    ||||||||| ||||||||||||||||||  ||||  |||||||||  | ||||||||||  |||||||| |||||| ||||    
T  9231242 tgttgtgtgtaagtatgagttatatgtctcatatcagatagaaaagtaaaggttgaacatattataaataagaggatccat 9231322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 31899592 - 31899496
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgcctta 202  Q
    |||||||||| |||| |||||||||||| | | || ||||| || |  | | ||||||||| |||||| | |||||||||||||| |||||||||||    
T  31899592 ttgttgtgtgaaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaactcattgcctta 31899496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 37894855 - 37894731
Alignment:
Q  109 ttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattt 208  Q
    |||||||||| | |||||||||||||| | |||| ||||||||  | ||| | || || |||||| | ||| ||| ||||||  ||||||||||||||||    
T  37894855 ttgtgtgcaaatgtgagttatatgtcccacattgaatagaaaagtaaaggctaaaaaccttataagtaagaagactcataaatccattgccttaagattt 37894756  T
Q  209 tgagtaagagtgtgatgtctctctc 233  Q
    ||  ||| |||||| ||| ||||||    
T  37894755 tggttaaaagtgtggtgtgtctctc 37894731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 37895227 - 37895111
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||| ||| |||||||||||||| | || ||||||||||  | | |||||| || ||| || | | || || ||||||  ||||||||||||     
T  37895227 ttgttgtgtgcgagtttgagttatatgtcccacatcggatagaaaaataaaagttgaaaaccttaaaagtaaaagaacacataaacccattgccttaagg 37895128  T
Q  206 ttttgagtaagagtgtg 222  Q
    ||||| |||||||||||    
T  37895127 ttttgggtaagagtgtg 37895111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 232
Target Start/End: Original strand, 3672780 - 3672819
Alignment:
Q  193 cattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    |||||||||||||||||| ||||||||||| |||||||||    
T  3672780 cattgccttaagattttgggtaagagtgtggtgtctctct 3672819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 6421794 - 6421849
Alignment:
Q  177 agaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||||||   ||||||||||| ||||| ||||||||||| |||||||||    
T  6421794 agaggacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctct 6421849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 6713020 - 6713095
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagatttt-gagtaagagtgtgatgtctctct 232  Q
    ||||||||| |||||| | ||||||||||||||   ||||| ||||| |||| | |||||||||||||||||||||    
T  6713020 gttgaacaccttataagtaagaggacccataaacctattgctttaaggtttttgggtaagagtgtgatgtctctct 6713095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 29676895 - 29677026
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagagga-----cccataaaatcattgcct 200  Q
    |||||||||||| || |||||||||||||| | || ||||| || |  | ||||| ||||| |||||  ||||||||     ||||||||  ||||||||    
T  29676895 ttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggtttaacaccttataggtgagaggagaagacccataaacccattgcct 29676994  T
Q  201 taagattttgagtaagagtgtgatgtctctct 232  Q
    ||||  ||| |||||||||||| |||||||||    
T  29676995 taaggctttaagtaagagtgtggtgtctctct 29677026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Original strand, 7598606 - 7598684
Alignment:
Q  111 gtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataa 189  Q
    |||||||||| |||||||||||||| | ||  |||| ||||  | ||||||||||| |||||| | |||||||||||||    
T  7598606 gtgtgcaagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagaggacccataa 7598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 221
Target Start/End: Original strand, 12910221 - 12910335
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    ||||||||| |||| |||||||||||| | | || |||| |||||  | ||||||||| | |||||| ||| | |||  ||||| |||||| |||||| |    
T  12910221 tgttgtgtgtaagtttgagttatatgttccacatcggatggaaaagtacaggttgaaccccttataagtgaaatgacttataaattcattgtcttaaggt 12910320  T
Q  207 tttgagtaagagtgt 221  Q
    |||| ||||||||||    
T  12910321 tttgggtaagagtgt 12910335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 14745388 - 14745334
Alignment:
Q  178 gaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    |||||||||||||  |||||||||||| ||||| |||||||||||  ||||||||    
T  14745388 gaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctct 14745334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 135
Target Start/End: Original strand, 3672711 - 3672740
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcc 135  Q
    ||||||||||||||||||||||||||||||    
T  3672711 ttgttgtgtgcaagtatgagttatatgtcc 3672740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 33731690 - 33731775
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctcgcctatgc 241  Q
    ||||||| ||| |||||| | |||||| |||||||   ||||||||||| ||||| |||||||| || ||||||||| || |||||    
T  33731690 aggttgagcaccttataagtaagaggatccataaacctattgccttaaggttttgggtaagagtatggtgtctctcttgcttatgc 33731775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 3673077 - 3673117
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggata 146  Q
    ||||||||||||||| |||||||||||||| | ||||||||    
T  3673077 ttgttgtgtgcaagtgtgagttatatgtcccacattggata 3673117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 23346279 - 23346354
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||| |||||| | ||||| ||||||||  ||| |||||||| ||||  |||||||||||||||||||||    
T  23346279 aggttaaacaccttataa-taagagggcccataaacccatagccttaaggttttcggtaagagtgtgatgtctctct 23346354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 35580534 - 35580494
Alignment:
Q  178 gaggacccataaaatcattgccttaagattttgagtaagag 218  Q
    ||||||||||||| ||||||||||||| ||||| |||||||    
T  35580534 gaggacccataaactcattgccttaaggttttgggtaagag 35580494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 38796384 - 38796300
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaa 190  Q
    ||||||||||||||| |||||||||||||| | || ||||| || |  | | ||||||||| |||||| | |||||||| |||||    
T  38796384 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataagtaagaggacctataaa 38796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 17294569 - 17294704
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | || ||||| || |  | |||||||||||||||||| | ||||||||||||||  ||||||||||||     
T  17294569 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaagg 17294668  T
Q  206 ttttgagtaagagtgtgatgtctctctcgcctatgc 241  Q
    ||||| ||||||||||| |||||||||||| |||||    
T  17294669 ttttgggtaagagtgtggtgtctctctcgcttatgc 17294704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 26661688 - 26661559
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | || || || || |  | ||||||||||| |||||| |||||||||||||||| |||||||||||||     
T  26661688 ttgttgtgtacaagtgtgagttatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagaggacccataaactcattgccttaagg 26661589  T
Q  206 ttttgagtaagagtgtgatgtctctctcgc 235  Q
    ||||| ||||||||||| ||||||||||||    
T  26661588 ttttgggtaagagtgtggtgtctctctcgc 26661559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 235
Target Start/End: Complemental strand, 24600479 - 24600351
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||  | ||||||||||  |||||| | |||| || |||||| |||||| |||||| |    
T  24600479 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaactcataaactcattgtcttaaggt 24600380  T
Q  207 tttgagtaagagtgtgatgtctctctcgc 235  Q
    |||| ||||||||||| ||||||||||||    
T  24600379 tttgtgtaagagtgtggtgtctctctcgc 24600351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 232
Target Start/End: Original strand, 22793268 - 22793397
Alignment:
Q  104 aattgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatca-ttgcctta 202  Q
    |||||||||| |||||| |||||||||||||| | || | ||||||||  |||||||||| ||||||||| |||||||| |||||||  || ||||||||    
T  22793268 aattgttgtgagcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgagaggatccataaacccatttgcctta 22793367  T
Q  203 agattttgagtaagagtgtgatgtctctct 232  Q
     | |||||||||||||||||| ||||||||    
T  22793368 cggttttgagtaagagtgtgacgtctctct 22793397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 34364917 - 34365052
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||  | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  ||| ||||||||     
T  34364917 ttgttgtgtgcaagtgtgagttatatgtcacacatcggataaaataataaaggttgaacaccttataagtaagaggacccataaacccatagccttaagg 34365016  T
Q  206 ttttgagtaagagtgtgatgtctctctcgcctatgc 241  Q
    ||||| ||||||||||| |||||||||||| |||||    
T  34365017 ttttgggtaagagtgtggtgtctctctcgcttatgc 34365052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 5320131 - 5320005
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||| ||||||| |||||||||||| | | || ||||||||||  | | ||||||||| |||||| |||||||||||||||| |||| ||||||||     
T  5320131 ttgttgtatgcaagtgtgagttatatgttccacatcggatagaaaagtaaaagttgaacaccttataagtgagaggacccataaactcatagccttaagg 5320032  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||  |||||||||    
T  5320031 ttttgggtaagagtgtagtgtctctct 5320005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 19283620 - 19283494
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||| | |  ||||||||||   |||||||| |||||| ||||||||||||| |||||| |||| |||||||| |    
T  19283620 tgttgtgtgcaagtgtgagttatatgtcccacaccggatagaaaagtggaggttgagcactttgtaaatgagaggacacataaactcatcgccttaaggt 19283521  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    ||||  ||||||||||  |||||||||    
T  19283520 tttggataagagtgtggcgtctctctc 19283494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 22077660 - 22077534
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||  | || ||||||||||  | ||||||||||| |||||| | |||||||||||||| || | |||||||| |    
T  22077660 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcgtagccttaaggt 22077561  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||| |||||||||||  |||||||||    
T  22077560 tttgggtaagagtgtggcgtctctctc 22077534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 39066366 - 39066240
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||| | | | || ||||||||||  | ||||||||||| |||||| | ||| ||||||||||||||||| ||||||     
T  39066366 ttgttgtgtgcaagtgtgagttatatattccacatcggatagaaaagtaaaggttgaacaccttataactaagatgacccataaaatcattgtcttaagg 39066267  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    |||||  |||||||||| |||||||||    
T  39066266 ttttggataagagtgtggtgtctctct 39066240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 230
Target Start/End: Original strand, 41156983 - 41157107
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| ||| |||||||||| |||  ||||| || |  | ||||||||||| |||||| | |||||||||||||| ||||||| |||||     
T  41156983 ttgttgtgtgcaagtgtgaattatatgtcccataacggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgctttaagg 41157082  T
Q  206 ttttgagtaagagtgtgatgtctct 230  Q
    ||||| ||||||||||| |||||||    
T  41157083 ttttgggtaagagtgtggtgtctct 41157107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 241
Target Start/End: Original strand, 34364499 - 34364634
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||  | || ||||| || |  | ||||||||||| |||||| | |||||| || ||||  ||| ||||||||     
T  34364499 ttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccgtaaacccatagccttaagg 34364598  T
Q  206 ttttgagtaagagtgtgatgtctctctcgcctatgc 241  Q
    ||||| |||||||||||||||||||||||| |||||    
T  34364599 ttttgggtaagagtgtgatgtctctctcgcttatgc 34364634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 1188753 - 1188627
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||| | |||| ||||||||||   ||||||||| | ||||||| ||||| ||| |||||| ||||||| ||||| |    
T  1188753 tgttgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtggaggttgaatattttataagtgagaagactcataaactcattgctttaaggt 1188654  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||| |||| ||||||  |||||||||    
T  1188653 tttgggtaaaagtgtggcgtctctctc 1188627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 29798191 - 29798317
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||| ||||||| |||||||||||||||| |||||||| || |  | ||||||||||| |||||| | ||||||| ||||||  ||||||||||||     
T  29798191 ttgttgtatgcaagtgtgagttatatgtcctacattggataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaagg 29798290  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    | |||  |||||||||| |||||||||    
T  29798291 tcttggataagagtgtggtgtctctct 29798317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 32594874 - 32594756
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||||| ||  |||| || |  | ||||||||||| |||||| | |||||||||||||| |||||| |||||| ||||| ||    
T  32594874 tgcaagtgtgagttatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggt 32594775  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  32594774 aagagtgtggtgtctctct 32594756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 233
Target Start/End: Complemental strand, 1187527 - 1187403
Alignment:
Q  109 ttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattt 208  Q
    |||||||||||| ||| |||||||||  | || | ||| ||||   |||||| |||| ||||||| ||||| |||||||||| ||||| |||||||||||    
T  1187527 ttgtgtgcaagtgtgaattatatgtctcacatcgaatataaaagtggaggttaaacattttataagtgagaagacccataaactcattaccttaagattt 1187428  T
Q  209 tgagtaagagtgtgatgtctctctc 233  Q
    ||||||| ||||||| |||||||||    
T  1187427 tgagtaaaagtgtgacgtctctctc 1187403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 228
Target Start/End: Original strand, 41157366 - 41157489
Alignment:
Q  105 attgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||||||||||| |||||||||||||| | ||  |||| || |  | | ||||||||| |||||| | ||||||||||||||  ||||||||| ||    
T  41157366 attgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagaggacccataaacccattgcctttag 41157465  T
Q  205 attttgagtaagagtgtgatgtct 228  Q
     ||||||||||||||||| |||||    
T  41157466 gttttgagtaagagtgtggtgtct 41157489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 143 - 233
Target Start/End: Original strand, 10351189 - 10351279
Alignment:
Q  143 gatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctc 233  Q
    |||||||||  |||||||||||||||||||| |||||| |||||||||  |||| | ||||||||||| |||||||||||  |||||||||    
T  10351189 gatagaaaaatagaggttgaacactttataagtgagagaacccataaacacattactttaagattttgggtaagagtgtggcgtctctctc 10351279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 26662064 - 26661938
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||| ||| ||||  |||| || |  | ||||||||||| |||||| ||||| ||||||||||   |||||||||||     
T  26662064 ttgttgtgtacaagtgtgagttatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgagaagacccataaaccgattgccttaagg 26661965  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  26661964 ttttgggtaagagtgtggtgtctctct 26661938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 40082399 - 40082524
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    |||||||| |||||| |||||||||||||||| || ||||| || |  | ||||||||||| |||||| | ||||||  |||||| |||||||||||||     
T  40082399 ttgttgtgcgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagga-tcataaattcattgccttaagg 40082497  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| | |||||||    
T  40082498 ttttgggtaagagtgtggtatctctct 40082524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 66638 - 66509
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||| | |||| ||||||||||  | ||||||||||| |||||| | |||||| |||||||   || ||||||||     
T  66638 ttgttgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacaccttataagtaagaggatccataaacatatggccttaagg 66539  T
Q  206 ttttgagtaagagtgtgatgtctctctcgc 235  Q
    ||||| |||||||| |   |||||||||||    
T  66538 ttttgggtaagagtatagcgtctctctcgc 66509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 9955899 - 9956027
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatg-agaggttgaacactttataaatgagaggacccataaaatca-ttgccttaa 203  Q
    ||||||||||  ||| |||||||||||||| | ||  |||| |||| | | ||||||||||| |||||| | ||||||||||| ||| || |||||||||    
T  9955899 ttgttgtgtgttagtgtgagttatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagaggacccattaaaccaattgccttaa 9955998  T
Q  204 gattttgagtaagagtgtgatgtctctct 232  Q
    | ||||| |||||||||||||||||||||    
T  9955999 ggttttgggtaagagtgtgatgtctctct 9956027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 204
Target Start/End: Complemental strand, 41184591 - 41184493
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    ||||||||||||||| |||||||||||||  | || ||||| || |  | |||||||||||||||||| | ||||||||||||||  ||||||||||||    
T  41184591 ttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaag 41184493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 44685449 - 44685546
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagagg-ttgaacactttataaatgagaggacccataaaatcattgccttaa 203  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||  | ||| ||||| || |||||| | |||||||| ||||| ||||||||||||    
T  44685449 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaa 44685546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 44290983 - 44290864
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  |||||||||||| ||||| ||    
T  44290983 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 44290884  T
Q  214 -aagagtgtgatgtctctct 232  Q
     ||||||||| ||| |||||    
T  44290883 aaagagtgtggtgtatctct 44290864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 44043886 - 44043812
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||| |||||| | ||| ||||||||||  ||||| |||||||||||| ||||||||||| |||||||||    
T  44043886 gttgaacaccttataagtaagatgacccataaacccattgtcttaagattttgggtaagagtgtggtgtctctct 44043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 228
Target Start/End: Complemental strand, 44290616 - 44290502
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||  |||||| | ||||||||||||||  |||||||||||| ||||| ||    
T  44290616 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 44290517  T
Q  214 aagagtgtgatgtct 228  Q
    |||||| || |||||    
T  44290516 aagagtatggtgtct 44290502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 48588646 - 48588528
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||| ||||||| | || ||||| || |  | ||||||||||| |||||| | ||| ||||| |||| ||||||||||||| ||||| ||    
T  48588646 tgcaagtgtgagttctatgtccgacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccgtaaattcattgccttaaggttttgggt 48588547  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||| | |||||||||    
T  48588546 aagagtgcggtgtctctct 48588528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 232
Target Start/End: Original strand, 3550721 - 3550838
Alignment:
Q  115 gcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagta 214  Q
    |||||| |||||||||||||| | ||  |||| || |  | ||||||||||| |||||| | ||||||| ||||||  |||||||||||  ||||| |||    
T  3550721 gcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaagttttgggta 3550820  T
Q  215 agagtgtgatgtctctct 232  Q
    |||||||| |||||||||    
T  3550821 agagtgtggtgtctctct 3550838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 222
Target Start/End: Complemental strand, 22077991 - 22077879
Alignment:
Q  109 ttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattt 208  Q
    |||||||||||| ||||||||||||  || || ||||||||||  | ||||||||||  |||||| | |||||||||||||| |||| ||| |||| |||    
T  22077991 ttgtgtgcaagtgtgagttatatgttttaaatcggatagaaaaataaaggttgaacatcttataagtaagaggacccataaactcatagcc-taaggttt 22077893  T
Q  209 tgagtaagagtgtg 222  Q
     | |||||||||||    
T  22077892 ggggtaagagtgtg 22077879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 204
Target Start/End: Complemental strand, 24132150 - 24132053
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||| ||||| | ||||||||||||||   || ||||||||||  | ||||||||||| |||||||| || ||| ||||||| |||||||||||||    
T  24132150 tgttgtatgcaactgtgagttatatgtccctcatcggatagaaaagtaaaggttgaacaccttataaataaggggatccataaactcattgccttaag 24132053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 14318909 - 14318985
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | ||| ||||||||||   ||||||||||| ||||| ||||||||||| |||||||||    
T  14318909 aggttgaacaccttataagtaagaagacccataaatctattgccttaaggttttgggtaagagtgtggtgtctctct 14318985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 229
Target Start/End: Complemental strand, 22077240 - 22077153
Alignment:
Q  142 ggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctc 229  Q
    ||||||||||  | |||||||| || |||||| | |||||||||||||| |||||||| |||| |||||  ||||||||||| |||||    
T  22077240 ggatagaaaagtaaaggttgaataccttataagtaagaggacccataaactcattgccctaaggttttggataagagtgtgacgtctc 22077153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 37556103 - 37556229
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatg-agaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    ||||||||| ||||| |||||||||||||| | || ||||| |||  | | ||||||||||  |||||| | |||||||| |||||  ||| ||||||||    
T  37556103 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaagaggacc-ataaacccatagccttaag 37556201  T
Q  205 attttgagtaagagtgtgatgtctctct 232  Q
     ||||| ||||||||||| |||||||||    
T  37556202 gttttgggtaagagtgtggtgtctctct 37556229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 41142364 - 41142467
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||| ||||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | | ||||||||||||  ||||||||||||     
T  41142364 ttgttctgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaaaaggacccataaacccattgccttaagg 41142463  T
Q  206 tttt 209  Q
    ||||    
T  41142464 tttt 41142467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 45839619 - 45839749
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggtt-----gaacactttataaatgagaggacccataaaatcattgcct 200  Q
    ||||||||| |||||||||||||||||||| | || ||||||||||| | |||||     |||||| |||||| | ||| ||||||||||   | |||||    
T  45839619 ttgttgtgtacaagtatgagttatatgtcccacatcggatagaaaat-aaaggttgaatcgaacaccttataagtaagaagacccataaatgtaatgcct 45839717  T
Q  201 taagattttgagtaagagtgtgatgtctctct 232  Q
    |||| ||||| |||||| |||| |||||||||    
T  45839718 taaggttttgggtaagattgtggtgtctctct 45839749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 228
Target Start/End: Complemental strand, 31767327 - 31767205
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| || ||||||||| | | || ||||| || |  | ||||||||||| |||||| | ||||||||||| ||   | |||||||||     
T  31767327 ttgttgtgtgcaagtgtgggttatatgttccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccattaacctaatgccttaagg 31767228  T
Q  206 ttttgagtaagagtgtgatgtct 228  Q
    ||||| |||||||||||| ||||    
T  31767227 ttttgggtaagagtgtgacgtct 31767205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 41759527 - 41759601
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||| |||||| | ||| || |||||||  |||||||||||| ||||| ||||||||||| |||||||||    
T  41759527 gttgaacaccttataagtaagatgatccataaatccattgccttaaggttttgggtaagagtgtggtgtctctct 41759601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 5997039 - 5996911
Alignment:
Q  104 aattgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaa 203  Q
    ||||||||||||||||  || ||||||||||| | ||  | |||||||   | | ||||||| |||||||||||||||| ||||| |  |||||  ||||    
T  5997039 aattgttgtgtgcaagcgtgggttatatgtcccacataagttagaaaagtggtgcttgaacattttataaatgagaggatccatatatccattg-tttaa 5996941  T
Q  204 gattttgagtaagagtgtgatgtctctctc 233  Q
    | |||||||| |||||||| ||||||||||    
T  5996940 ggttttgagtgagagtgtggtgtctctctc 5996911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 220
Target Start/End: Complemental strand, 30630803 - 30630690
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||| ||||||||| ||| |||||||||  | || ||||| ||||| | |||||  ||||||||||| | |||| |||||||||  |||||||||||  |    
T  30630803 tgttatgtgcaagtgtgatttatatgtctcacatcggataaaaaattaaaggtttgacactttataagtaagagaacccataaacacattgccttaaagt 30630704  T
Q  207 tttgagtaagagtg 220  Q
    |||| |||||||||    
T  30630703 tttgggtaagagtg 30630690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 31973411 - 31973374
Alignment:
Q  196 tgccttaagattttgagtaagagtgtgatgtctctctc 233  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  31973411 tgccttaagattttgggtaagagtgtgatgtctctctc 31973374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 37850766 - 37850682
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaa 190  Q
    ||||||||||||||| |||||||||||||| | || | ||| || |  ||||||||||||| |||||| | |||| |||||||||    
T  37850766 ttgttgtgtgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaacccataaa 37850682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 50469246 - 50469178
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaat 175  Q
    |||||||||||||| |||||||||||||||| ||  ||||  |||  | ||||||||||||||||||||    
T  50469246 tgttgtgtgcaagtgtgagttatatgtcctacatcagataataaagtaaaggttgaacactttataaat 50469178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 3875497 - 3875370
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||  | |||||||||||  | || ||||| ||||  | |||||| |||| |||||| | ||||||| ||||||  ||||||||||||     
T  3875497 ttgttgtgtgcaagagtcagttatatgtcacacatcggataaaaaagtaaaggttgtacaccttataagtaagaggactcataaacccattgccttaagg 3875398  T
Q  206 ttttgagtaagagtgtgatgtctctctc 233  Q
    ||||  |||||| ||||  |||||||||    
T  3875397 ttttaggtaagaatgtggagtctctctc 3875370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 11977324 - 11977398
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||| |||||| | |||| || ||||||   | ||||||||| ||||| |||||||||||||||||||||    
T  11977324 gttgaacaccttataagtaagagcactcataaacctaatgccttaaggttttgggtaagagtgtgatgtctctct 11977398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 66254 - 66137
Alignment:
Q  107 tgttgtgtgcaagtatgagttat-atgtcctatattggatagaaaatgagaggtt-gaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||||||||| ||||| || |||||  | || ||||||||||  | ||||| |||||| |||||| | ||||||||||||||   || ||||||||    
T  66254 tgttgtgtgcaagtgtgagtaatcatgtctcacatcggatagaaaagtaaaggtttgaacaccttataagtaagaggacccataaacctatggccttaag 66155  T
Q  205 attttgagtaagagtgtg 222  Q
     ||||| |||||||||||    
T  66154 gttttgggtaagagtgtg 66137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 22077287 - 22077242
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaat 152  Q
    |||||||||||||| |||||||||||||| | || |||||||||||    
T  22077287 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaat 22077242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 190
Target Start/End: Complemental strand, 3537305 - 3537229
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaa 190  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||    
T  3537305 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 3537229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 3537715 - 3537639
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||| | | |||||||| |||||  ||||| |||||| ||||| |||||||||||  ||||||||    
T  3537715 aggttgaacaccttatgagtaagaggacctataaacccattggcttaaggttttgggtaagagtgtggcgtctctct 3537639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 21378207 - 21378123
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaa 190  Q
    ||||||||||||||| | |||||||||||| | || |||||||| |  | |||||||| |  |||||| | ||||||||||||||    
T  21378207 ttgttgtgtgcaagtgtcagttatatgtcccagatcggatagaacagtaaaggttgaatatcttataagtaagaggacccataaa 21378123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 24448321 - 24448373
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagattttg 210  Q
    |||||||| ||||||| ||||||| | |||||| |||||| ||||||||||||    
T  24448321 gttgaacattttataagtgagagggctcataaactcattgtcttaagattttg 24448373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 38804471 - 38804395
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | |||||| |||||||  |||  ||||||| ||||| ||||||||||  |||||||||    
T  38804471 aggttgaacacattataagtaagaggatccataaacccataaccttaaggttttgggtaagagtgtagtgtctctct 38804395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 106 - 228
Target Start/End: Original strand, 3341120 - 3341242
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | |||||||| || |  | ||||| |||||||||||| | ||||||||||||| |||||||  ||||||    
T  3341120 ttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacactttataagtaagaggacccataacatcattgttttaaga 3341219  T
Q  206 ttttgagtaagagtgtgatgtct 228  Q
    ||||| |||||||||||||||||    
T  3341220 ttttgggtaagagtgtgatgtct 3341242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 36629230 - 36629355
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||| ||||| |||||||||||||| | || ||||||||||  | | ||| ||||| |||||| | |||||||||||||| ||||||||||||| |    
T  36629230 tgttgtgttcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttaaacaccttataagtaagaggacccataaactcattgccttaaggt 36629329  T
Q  207 tttgagtaagagtgtgatgtctctct 232  Q
    |||| ||||||||||| |||||||||    
T  36629330 tttgggtaagagtgtggtgtctctct 36629355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 240
Target Start/End: Complemental strand, 22028125 - 22027991
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| ||| |||||||||| | || ||||| || | || ||||||||||| |||||| | ||||||||||||||   |||||||||||     
T  22028125 ttgttgtgtgcaagtgtgacttatatgtcccacatcggataaaatacgaaaggttgaacaccttataagtaagaggacccataaacatattgccttaagg 22028026  T
Q  206 ttttgagtaagagtgtgatgtctctctcgcctatg 240  Q
    ||||| |||||| |||| |||||||||||| ||||    
T  22028025 ttttgggtaagaatgtggtgtctctctcgcttatg 22027991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 232
Target Start/End: Complemental strand, 32941286 - 32941161
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||| ||||||| ||||||||||||| || || ||| |||| |  | ||||||||||| |||||||| ||||| | |||||| ||||||||||||| |    
T  32941286 tgttgtctgcaagtgtgagttatatgtcttacatcggaaagaacagtaaaggttgaacaccttataaataagagggctcataaactcattgccttaaggt 32941187  T
Q  207 tttgagtaagagtgtgatgtctctct 232  Q
    |||| |||||||||||| ||||||||    
T  32941186 tttgggtaagagtgtgacgtctctct 32941161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 28034222 - 28034348
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| ||| ||||||||||   || ||||||||||   ||||||||||||||||||| |||||| ||||||||| | ||||| ||||| |    
T  28034222 tgttgtgtgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacactttataagtgagagaacccataaacttattgctttaaggt 28034321  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||  |||||||||||  |||||||||    
T  28034322 tttaggtaagagtgtggcgtctctctc 28034348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 34646813 - 34646687
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | || ||||| || |  | | ||||||||| |||||| | ||||||| |||||| |||||||||||||     
T  34646813 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataactaagaggactcataaactcattgccttaagg 34646714  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  34646713 ttttgggtaagagtgtggtgtctctct 34646687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 50630903 - 50630793
Alignment:
Q  122 tgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgt 221  Q
    |||||||||||||||| || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  |||||||||||| ||||| ||||||||||    
T  50630903 tgagttatatgtcctacatcggataaaatagtaaaggttgaacacattataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 50630804  T
Q  222 gatgtctctct 232  Q
    | |||||||||    
T  50630803 ggtgtctctct 50630793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 760197 - 760307
Alignment:
Q  122 tgagttatatgtcctatattggatagaaaa-tgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtg 220  Q
    |||||||||||||| | || | |||||||| ||| |||||||  ||||||||| |||||||||||||||| ||||||||||||||||||| |||| ||||    
T  760197 tgagttatatgtcccacatcgaatagaaaaatga-aggttgagaactttataagtgagaggacccataaactcattgccttaagattttg-gtaaaagtg 760294  T
Q  221 tgatgtctctctc 233  Q
    || ||||||||||    
T  760295 tggtgtctctctc 760307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 23557024 - 23556904
Alignment:
Q  112 tgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttga 211  Q
    ||||||||| ||||||| ||||  || || ||||||||||   ||||||||||| ||||||||| |||| | ||||||||||||||||||||  |||||     
T  23557024 tgtgcaagtgtgagttaaatgttttacatcggatagaaaagtggaggttgaacattttataaataagagaatccataaaatcattgccttaaagttttgg 23556925  T
Q  212 gtaagagtgtgatgtctctct 232  Q
     ||||||||||| ||||||||    
T  23556924 ataagagtgtgacgtctctct 23556904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 16888981 - 16888854
Alignment:
Q  106 ttgttgtgtg-caagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||||| ||||| |||||||||||||| | || ||||||||||  | |||||||| || |||||| | |||| ||| ||||| |||||| |||| |    
T  16888981 ttgttgtgtggcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaacctataaactcattgtcttacg 16888882  T
Q  205 attttgagtaagagtgtgatgtctctct 232  Q
     ||||| |||||||||||||||||||||    
T  16888881 gttttgggtaagagtgtgatgtctctct 16888854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 34544147 - 34544226
Alignment:
Q  155 gaggttgaacactttataaatgagaggacccataaaatcattgccttaa-gattttgagtaagagtgtgatgtctctctc 233  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| | ||||| ||||||||||| | ||||||||    
T  34544147 gaggttgatcactttataaatgagaggacccataaactcattgccttaaggtttttgggtaagagtgtggtatctctctc 34544226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 39404013 - 39404136
Alignment:
Q  109 ttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattt 208  Q
    |||||| ||||| |||||||||||||||| |||| ||| || |  | |||||||||||||||||| | ||||||| |||||| |||| || ||||| |||    
T  39404013 ttgtgtacaagtgtgagttatatgtcctacattgaataaaagagtaaaggttgaacactttataagtaagaggactcataaactcatagcattaaggttt 39404112  T
Q  209 tgagtaagagtgtgatgtctctct 232  Q
    || |||||||||||  ||||||||    
T  39404113 tgggtaagagtgtggcgtctctct 39404136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 3244614 - 3244488
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||  | || ||||||||||  | ||||||||||  |||||| | |||||||||||||| |||||| |||||  |    
T  3244614 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgtcttaaagt 3244515  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||| |||||| ||||  |||||||||    
T  3244514 tttgggtaagaatgtgtcgtctctctc 3244488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 4955481 - 4955355
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||  |||| ||||| || |    ||||||||||| |||||| | ||||||| ||||||  ||||||||||||     
T  4955481 ttgttgtgtgcaagtgtgagttatatgtctcatatcggataaaatagttaaggttgaacaccttataagtaagaggactcataaacccattgccttaagg 4955382  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||||||||||  ||||||||    
T  4955381 ttttgggtaagagtgtggcgtctctct 4955355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 15841483 - 15841405
Alignment:
Q  155 gaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctc 233  Q
    ||||||||||||||| ||| ||||||||  ||||||  |||||||||||| ||||| ||||||||||||||||||||||    
T  15841483 gaggttgaacactttgtaagtgagaggattcataaacacattgccttaaggttttgggtaagagtgtgatgtctctctc 15841405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 25483328 - 25483454
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||  | || ||||| || |  | ||||||||||  |||||| | |||||| |||||||  ||||||||||||     
T  25483328 ttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacatcttataagtaagaggatccataaacccattgccttaagg 25483427  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  25483428 ttttgggtaagagtgtggtgtctctct 25483454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 50002418 - 50002544
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||| ||||||| |||||||||||||  | || ||||| || |  | |||||||||||||| ||| | ||||||||||||||  ||||| ||||||     
T  50002418 ttgttgtttgcaagtgtgagttatatgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaatccattgtcttaagg 50002517  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  50002518 ttttgggtaagagtgtggtgtctctct 50002544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 51768224 - 51768098
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||| | ||||||||||||||||||| | ||| || |  | | ||||||||| |||||||| ||||||| |||||| |||||| ||||||     
T  51768224 ttgttgtgtgcaaatgtgagttatatgtcctatatcgaatataagagtaaatgttgaacaccttataaataagaggactcataaactcattgtcttaagg 51768125  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||| |||  |||||||||||    
T  51768124 ttttgggtaaaagtacgatgtctctct 51768098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 55933280 - 55933162
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||||| || ||||| || |  |  |||||||||| |||||| | ||||||||||||||  |||||||||||  ||||| ||    
T  55933280 tgcaagtgtgagttatatgtcctacatcggataaaatagtaagggttgaacaccttataagtaagaggacccataaacccattgccttaaagttttgggt 55933181  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  55933180 aagagtgtggtgtctctct 55933162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 232
Target Start/End: Complemental strand, 39793023 - 39792898
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||| ||||| |||||||||||||| | ||  |||||||||  | | ||||||||| ||||||   |||||| || |||| ||||||||||||| |    
T  39793023 tgttgtgtacaagtgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataagaaagaggaaccgtaaactcattgccttaaggt 39792924  T
Q  207 tttgagtaagagtgtgatgtctctct 232  Q
    |||| ||||||||||| |||||||||    
T  39792923 tttgggtaagagtgtggtgtctctct 39792898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 232
Target Start/End: Original strand, 44620654 - 44620777
Alignment:
Q  108 gttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagatt 207  Q
    ||||||||||||| |||||||||||||| | || ||||  || |  |||||||||||||||||||| | ||||||||||| ||| |||  ||||||| ||    
T  44620654 gttgtgtgcaagtgtgagttatatgtcccacatcggatgaaatagtagaggttgaacactttataagtaagaggacccat-aaaccataaccttaaggtt 44620752  T
Q  208 ttgagtaagagtgtgatgtctctct 232  Q
    ||| ||||||||||| | |||||||    
T  44620753 ttgggtaagagtgtggtttctctct 44620777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 52884879 - 52885007
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | |||||| |||||||  ||||||||||||     
T  52884879 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaagg 52884978  T
Q  206 tttt-gagtaagagtgtgatgtctctctc 233  Q
    |||| | |||||| |||| ||||||||||    
T  52884979 ttttggggtaagaatgtggtgtctctctc 52885007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 36608825 - 36608698
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | || ||||| || |  | | ||||||||| | |||| | |||||| |||||||  ||||| ||||||     
T  36608825 ttgttgtgtgcaagtgtgagttatatgtccaacatcggataaaagagtaaaagttgaacacctcataagtaagaggatccataaatccattgtcttaagg 36608726  T
Q  206 ttttgagtaagagtgtgatgtctctctc 233  Q
    ||||| ||||||||||| ||||||||||    
T  36608725 ttttgggtaagagtgtggtgtctctctc 36608698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 1731811 - 1731685
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||| | |||||||||||||| | ||  |||| || |  | ||||||||||  |||||||| ||||||||||||||   |||||||||||     
T  1731811 ttgttgtgtgcaaatgtgagttatatgtcccacatcagataaaacagtaaaggttgaacatcttataaataagaggacccataaaccaattgccttaagg 1731712  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| ||| |||||    
T  1731711 ttttgggtaagagtgtggtgtttctct 1731685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 2740693 - 2740819
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||| | || |||||||| |  | ||||||||||| |||||| | |||||||| |||||  ||  |||||||| |    
T  2740693 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacctataaacccagagccttaaggt 2740792  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||  |||||||||||  |||||||||    
T  2740793 tttacgtaagagtgtggcgtctctctc 2740819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 49880160 - 49880278
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | |||| ||| || |  | ||||||||||| |||||| | ||||||||||||||  || ||||||||| ||||| ||    
T  49880160 tgcaagtgtgagttatatgtcccacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccactgccttaaggttttgggt 49880259  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||| ||| |||||||||    
T  49880260 aagagcgtggtgtctctct 49880278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 22028535 - 22028407
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgaga--ggttgaacactttataaatgagaggacccataaaatcattgccttaa 203  Q
    ||||||||||||||| | | |||||||||||| || ||||| ||||  | |  |||||||||| |||| | | |||||||||||||| |||||| |||||    
T  22028535 ttgttgtgtgcaagtgttacttatatgtcctacatcggataaaaaaaaataaaggttgaacaccttattagtaagaggacccataaactcattgtcttaa 22028436  T
Q  204 gattttgagtaagagtgtgatgtctctct 232  Q
      ||||| ||||||||||| |||||||||    
T  22028435 tgttttgggtaagagtgtggtgtctctct 22028407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 232
Target Start/End: Complemental strand, 54017754 - 54017633
Alignment:
Q  111 gtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttg 210  Q
    |||||||||| |||||||||||||| |  |  |||| || |  | ||||||||||  |||||| | ||||||||||||||  |||||||||||| ||||     
T  54017754 gtgtgcaagtgtgagttatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttta 54017655  T
Q  211 agtaagagtgtgatgtctctct 232  Q
     |||||||||||||||||||||    
T  54017654 ggtaagagtgtgatgtctctct 54017633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 54936238 - 54936315
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctc 233  Q
    ||||||||||| || ||| | ||||||||||||||  |||||||||||| ||||| ||||||||||| ||||||||||    
T  54936238 aggttgaacaccttgtaagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctc 54936315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 18932863 - 18932787
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    |||||||| || |||||||| ||||||||||||||  |||||||||||| ||||  ||||||||||| |||||||||    
T  18932863 aggttgaataccttataaataagaggacccataaacccattgccttaaggttttaggtaagagtgtggtgtctctct 18932787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 233
Target Start/End: Complemental strand, 41707629 - 41707502
Alignment:
Q  105 attgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||||| ||||| |||||||||||||| | || ||||| || |  | |||||||||||  ||||| | | || ||||||||| |||||| ||||||    
T  41707629 attgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccatataagtaaaagaacccataaactcattgtcttaag 41707530  T
Q  205 attttgagtaagagtgtgatgtctctctc 233  Q
     ||||| ||||||||||| ||||||||||    
T  41707529 gttttg-gtaagagtgtggtgtctctctc 41707502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 44620395 - 44620471
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||||| ||||  ||||||||  |||||||||||| ||||| ||||||||||||||| |||||    
T  44620395 aggttgaacaccttataaataagagagcccataaacccattgccttaaggttttgggtaagagtgtgatgtttctct 44620471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 45496847 - 45496923
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | |||||||| ||||| |||||| |||||| ||||| ||||||||||| |||||||||    
T  45496847 aggttgaacaccttataagtaagaggacctataaactcattgtcttaaggttttgggtaagagtgtggtgtctctct 45496923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 54108955 - 54109030
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | ||||||||||||||  |||||||||||| ||||| ||||||||||| |||||||||    
T  54108955 aggttgaacaccttataagtaagaggacccataaacccattgccttaag-ttttgggtaagagtgtggtgtctctct 54109030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 222
Target Start/End: Original strand, 2741064 - 2741179
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||| ||||||||| |||||||||||||| | ||  ||||||| |  | |||||||| || |||||| | |||||||||||||   |||||||||||| |    
T  2741064 tgttatgtgcaagtgtgagttatatgtcccacatcagatagaatagtaaaggttgaataccttataagtaagaggacccataactccattgccttaaggt 2741163  T
Q  207 tttgagtaagagtgtg 222  Q
    |||| |||||||||||    
T  2741164 tttgggtaagagtgtg 2741179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 22183428 - 22183301
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||| ||| | || ||||| || |  | | |||||||| ||||||| | | ||||||||||||  ||||||||||||     
T  22183428 ttgttgtgtgcaagtgtgagttatatatcccacatcggataaaagagtaaatgttgaacaatttataagtaaaaggacccataaacccattgccttaagg 22183329  T
Q  206 ttttgagtaagagtgtgatgtctctctc 233  Q
    |||||  ||||||||||  |||||||||    
T  22183328 ttttggataagagtgtggcgtctctctc 22183301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 52884688 - 52884814
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||| || | |||||  |||||||||||| |    
T  52884688 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagatgatcgataaacccattgccttaaggt 52884787  T
Q  207 ttt-gagtaagagtgtgatgtctctct 232  Q
    ||| | ||||||||||| |||||||||    
T  52884788 tttggggtaagagtgtggtgtctctct 52884814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 36572011 - 36572140
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | || | ||| || |  | | ||||||||| |||||| | ||| ||||||||||  ||||||||||||     
T  36572011 ttgttgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaatgttgaacaccttataagtaagaagacccataaatccattgccttaagg 36572110  T
Q  206 ttttgagtaagagtgtgatgtctctctcgc 235  Q
    ||||| || ||||| || ||||||||||||    
T  36572111 ttttgggttagagtatggtgtctctctcgc 36572140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 43827485 - 43827557
Alignment:
Q  159 ttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    |||||| | |||||||| |||||||||||||| ||||||||||||| ||| || |||||||||| |||||||||    
T  43827485 ttgaactccttataaataagaggacccataaattcattgccttaaggtttgga-taagagtgtggtgtctctct 43827557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 11348492 - 11348396
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgcctta 202  Q
    ||||||||||||| | |||||||||||| ||| ||  |||| || |   ||||||||||||||||||| |||||||| ||||| | |||||||||||    
T  11348492 ttgttgtgtgcaattgtgagttatatgttctacatcagataaaatagtggaggttgaacactttataagtgagaggatccatatattcattgcctta 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 10245912 - 10246034
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| ||||||||||| || | || ||||| || |  | ||||||||||| |||||| | |||||| |||||||  ||  ||||||||     
T  10245912 ttgttgtgtgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacaccttataagtaagagga-ccataaacccaaagccttaagg 10246010  T
Q  206 ttttgagtaagagtgtgatgtctc 229  Q
    ||||| ||||||||||| ||||||    
T  10246011 ttttgggtaagagtgtggtgtctc 10246034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 20826261 - 20826335
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||| |||||| | |||| |||||||||  ||| ||||||| |||||  |||||||||||||||||||||    
T  20826261 gttgaacacgttataagtaagagaacccataaacccatagccttaacattttaggtaagagtgtgatgtctctct 20826335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 31691206 - 31691260
Alignment:
Q  168 ttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtg 222  Q
    |||||| | |||||||||||||| ||||||||||||| ||||| |||||||||||    
T  31691206 ttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtg 31691260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 41370357 - 41370475
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | | |||||| || |||||| | ||||||||||||||  |||||||||||  ||||| ||    
T  41370357 tgcaagtgtgagttatatgtcccaaatcggataaaatagtaaatgttgaaaaccttataagtaagaggacccataaacccattgccttaaagttttgggt 41370456  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||  |||||||||    
T  41370457 aagagtgtagtgtctctct 41370475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 221
Target Start/End: Complemental strand, 54741341 - 54741227
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| ||| |||||||||  | || ||||||||||  | ||||||||||| |||||| | |||||||||||| |   |||| |||||| |    
T  54741341 tgttgtgtgcaagtgtgaattatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccatacacagattgtcttaaggt 54741242  T
Q  207 tttgagtaagagtgt 221  Q
    ||||  |||||||||    
T  54741241 tttggataagagtgt 54741227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 203
Target Start/End: Complemental strand, 49076612 - 49076515
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaa 203  Q
    ||||||||||||||| |||||||||||| | |||| ||||| || |  | ||||||||||| |||||| | |||||||| |||||  ||||| |||||    
T  49076612 ttgttgtgtgcaagtgtgagttatatgtaccatatcggataaaacagtaaaggttgaacaccttataagtaagaggacctataaacccattgtcttaa 49076515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 54108578 - 54108651
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaa-tcattgccttaagattttgagtaagagtgtgatgtct 228  Q
    ||||||||||| |||||| | | ||||||||||||| ||||||||||||| |||||  |||||||||| |||||    
T  54108578 aggttgaacaccttataagtaaaaggacccataaaattcattgccttaaggttttggctaagagtgtggtgtct 54108651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 3340849 - 3340921
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtct 228  Q
    ||||||| ||| |||||| | ||||||||||||||  || ||||||||| ||||| ||||||||||| |||||    
T  3340849 aggttgagcaccttataagtaagaggacccataaacccactgccttaaggttttgggtaagagtgtggtgtct 3340921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 23817783 - 23817719
Alignment:
Q  168 ttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    |||||| | ||||||  |||||| ||||||||||||| ||||| ||||||||||| |||||||||    
T  23817783 ttataagtaagaggattcataaactcattgccttaaggttttgggtaagagtgtggtgtctctct 23817719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 44621044 - 44621120
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | ||||| | |||||| |||||| |||||| ||||| ||||||||||| ||| |||||    
T  44621044 aggttgaacaccttataagtaagagggcacataaactcattgtcttaaggttttgggtaagagtgtggtgtttctct 44621120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 233
Target Start/End: Original strand, 3700356 - 3700476
Alignment:
Q  105 attgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||||||||||| |||||||||||||||| || ||||| || |  | | ||||||||| |||||| | | |||||        |||||||||||||    
T  3700356 attgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacaccttataagtaaaaggac--------tcattgccttaag 3700447  T
Q  205 attttgagtaagagtgtgatgtctctctc 233  Q
     |||||  ||||||| |||||||||||||    
T  3700448 gttttggataagagtatgatgtctctctc 3700476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 49302969 - 49303024
Alignment:
Q  177 agaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||||||  |||||||||||| ||||| ||||||||||| ||| |||||    
T  49302969 agaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtatctct 49303024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 40067088 - 40067162
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||| |||||| | ||||||| |||| |  || | ||||||||||||| |||| ||||||||||||||||    
T  40067088 gttgaacacattataagtaagaggacacatagatccactaccttaagattttgggtaaaagtgtgatgtctctct 40067162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 20825829 - 20825954
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||| ||| | |||||||||||| | | || ||||| || |  | ||||||||||| |||||||| |||| |||||||||    | |||||||| |    
T  20825829 tgttgtgtacaaatgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataaataagagcacccataaacctttagccttaaggt 20825928  T
Q  207 tttgagtaagagtgtgatgtctctct 232  Q
    |||| ||||||||||| ||| |||||    
T  20825929 tttgggtaagagtgtggtgtttctct 20825954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 6876261 - 6876137
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| ||| |||||| || || || ||||| ||| || ||||| |||||||||||||  ||||| ||| |||||  ||| | ||||||     
T  6876261 ttgttgtgtgcaagtgtgatttatatatcttacatcggataaaaactg-gaggtcgaacactttataa--gagagaaccaataaacgcatcgacttaagg 6876165  T
Q  206 ttttgagtaagagtgtgatgtctctctc 233  Q
    |||||  ||| ||||||| |||||||||    
T  6876164 ttttggataaaagtgtgacgtctctctc 6876137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 11197293 - 11197345
Alignment:
Q  181 gacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctc 233  Q
    ||||||||||  |||||||||| | ||||| ||||||||||| ||||||||||    
T  11197293 gacccataaacccattgccttagggttttgggtaagagtgtggtgtctctctc 11197345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 19504697 - 19504737
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggata 146  Q
    ||||||||| |||||||||||||||||||| |||| |||||    
T  19504697 ttgttgtgtacaagtatgagttatatgtcccatatcggata 19504737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 228
Target Start/End: Complemental strand, 49076992 - 49076873
Alignment:
Q  108 gttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagatt 207  Q
    ||||||||||||| |||||||||||| | ||||||| || || |  | ||||||||||| |||| | | |||| |||||||||  |||  ||||||| ||    
T  49076992 gttgtgtgcaagtgtgagttatatgttccatattggctaaaatagtaaaggttgaacaccttat-agtaagagaacccataaacccataaccttaaggtt 49076894  T
Q  208 ttgagtaagagtgtgatgtct 228  Q
    ||| || |||||||| |||||    
T  49076893 ttgggttagagtgtggtgtct 49076873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 5349 - 5475
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||| | | || |||||||| |  | ||||||||||| |||||| | ||||||||||||||  |||||||||||||    
T  5349 ttgttgtgtgcaagtgtgagttatatgttccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaga 5448  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    |||||  |||||||||| |||||||||    
T  5449 ttttggataagagtgtggtgtctctct 5475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 5049 - 5109
Alignment:
Q  181 gacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctcgcctatgc 241  Q
    |||||||||| ||||||||||| | ||||| ||||||||||| |||||||||||| |||||    
T  5049 gacccataaactcattgccttatggttttgggtaagagtgtggtgtctctctcgcttatgc 5109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 1085782 - 1085656
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | || ||||| || |  | |||||||||||||||||| | ||||||||||||||  ||||||||||||     
T  1085782 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaagg 1085683  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||||||||||  ||||||||    
T  1085682 ttttgggtaagagtgtggcgtctctct 1085656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 7517572 - 7517699
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  ||||||||||||     
T  7517572 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 7517671  T
Q  206 ttttgagtaagagtgtgatgtctctctc 233  Q
    ||||| ||||||||||| ||||| ||||    
T  7517672 ttttgggtaagagtgtggtgtctgtctc 7517699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 45434628 - 45434754
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| | |||||||||||| | || ||||| ||||  | ||||||||||| |||||| | |||||||||||||| | | |||||||||     
T  45434628 ttgttgtgtacaagtgtaagttatatgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagaggacccataaacttactgccttaagg 45434727  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||||||||||||||||||||    
T  45434728 ttttgggtaagagtgtgatgtctctct 45434754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 7554017 - 7554146
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | |||||| |||||||  ||| ||||||||     
T  7554017 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccatagccttaagg 7554116  T
Q  206 ttttgagtaagagtgtgatgtctctctcgc 235  Q
    ||||| ||||||||||| ||||||||||||    
T  7554117 ttttgggtaagagtgtggtgtctctctcgc 7554146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 240
Target Start/End: Complemental strand, 8128606 - 8128473
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||  | ||||||||||| |||||  | ||||||||||||||  |||  ||||||| |    
T  8128606 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaaataaaggttgaacaccttatatgtaagaggacccataaacccataaccttaaggt 8128507  T
Q  207 tttgagtaagagtgtgatgtctctctcgcctatg 240  Q
    ||||  |||||||||| |||| ||||||| ||||    
T  8128506 tttggttaagagtgtggtgtcactctcgcttatg 8128473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 30245069 - 30245195
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||| | | || ||||| || |  | ||||||||||| |||||| | ||| |||||||||| |||||||||||||     
T  30245069 ttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagacgacccataaactcattgccttaagg 30245168  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  30245169 ttttgggtaagagtgtggtgtctctct 30245195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 37533168 - 37533051
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | |||||||| || |  | ||||||||||| |||||| | |||||||||||||| ||||||||||||| ||||| ||    
T  37533168 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggt 37533069  T
Q  214 aagagtgtgatgtctctct 232  Q
    || |||||| |||||||||    
T  37533068 aa-agtgtggtgtctctct 37533051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 37345909 - 37346037
Alignment:
Q  107 tgttgtgtgcaagtatgagttatat--gtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||||||||| ||||||||||  ||| |||||  |||||||||   |||||| |||| ||||||| ||||| ||||||||||   ||||||||||     
T  37345909 tgttgtgtgcaagtgtgagttatatatgtcatatatctgatagaaaagtggaggttaaacattttataagtgagaagacccataaacatattgccttaaa 37346008  T
Q  205 attttgagtaagagtgtgatgtctctctc 233  Q
     |||||||||||||||||| |||||||||    
T  37346009 gttttgagtaagagtgtgacgtctctctc 37346037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 4124254 - 4124127
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||| | ||| ||| |||||||| || || ||||||||  ||||||  ||||||||||| |||||||||| ||||| ||||||| |||||     
T  4124254 ttgttgtgtgcaactgtgaattacatgtcctacatcggttagaaaatttgaggtttgacactttataagtgagaggaccaataaactcattgcattaagg 4124155  T
Q  206 ttttgagtaagagtgtgatgtctctctc 233  Q
    |||||  ||| |||||| ||||||||||    
T  4124154 ttttggataaaagtgtggtgtctctctc 4124127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 30244262 - 30244389
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | || ||||| || |  | |||||||| || |||||| | ||||||| ||||||  ||||||||||||     
T  30244262 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagaggactcataaacccattgccttaagg 30244361  T
Q  206 ttttgagtaagagtgtgatgtctctctc 233  Q
    ||||| ||||||||||| ||||||||||    
T  30244362 ttttgggtaagagtgtggtgtctctctc 30244389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 23543 - 23417
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||| | |||||||||||| | | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||   |||||||||||     
T  23543 ttgttgtgtgcaattgtgagttatatgttccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaagg 23444  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  23443 ttttgggtaagagtgtggtgtctctct 23417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 22567204 - 22567079
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||| ||||||| ||||| |||||||| | || ||||| || |  | ||||||||||| |||||| | |||||||||||||| |||||||||||||     
T  22567204 ttgttgtatgcaagtgtgagtaatatgtcc-acatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaagg 22567106  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||  ||||||||||| |||||||||    
T  22567105 tttttggtaagagtgtggtgtctctct 22567079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 235
Target Start/End: Complemental strand, 34218200 - 34218071
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||| | |||||||||||||  | || ||||| ||||  | | ||||||||| |||||| ||||||||| ||||||  ||||| ||||||     
T  34218200 ttgttgtgtacaaatgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagaggactcataaacccattgtcttaagg 34218101  T
Q  206 ttttgagtaagagtgtgatgtctctctcgc 235  Q
    ||||| ||||||||||| ||||||||||||    
T  34218100 ttttgggtaagagtgtggtgtctctctcgc 34218071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 230
Target Start/End: Complemental strand, 37533519 - 37533406
Alignment:
Q  117 aagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaag 216  Q
    |||| |||||||||||| ||| |||| ||| || |  | ||||||||||| |||||| | ||||||||||||||  |||||||||||| ||||| |||||    
T  37533519 aagtgtgagttatatgttctacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaag 37533420  T
Q  217 agtgtgatgtctct 230  Q
    |||||| |||||||    
T  37533419 agtgtggtgtctct 37533406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 22566828 - 22566712
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||| ||||||| ||||| |||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  ||||||||||||     
T  22566828 ttgttgtatgcaagtgtgagtaatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 22566729  T
Q  206 ttttgagtaagagtgtg 222  Q
    ||||| |||||||||||    
T  22566728 ttttgggtaagagtgtg 22566712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 16569188 - 16569314
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||| ||||||| |||||||||||||  | || |||||||| |  | |||||||| || |||||| | ||||||||||||||  ||||||||||||     
T  16569188 ttgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaagg 16569287  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||  ||||||||| | |||||||||    
T  16569288 tttttggtaagagtgcggtgtctctct 16569314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 16596474 - 16596348
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||| ||||||| |||||||||||||  | || |||||||| |  | |||||||| || |||||| | ||||||||||||||  ||||||||||||     
T  16596474 ttgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaagg 16596375  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||  ||||||||| | |||||||||    
T  16596374 tttttggtaagagtgcggtgtctctct 16596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 24177427 - 24177553
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    |||||||||||||||||||||||||||||| | || ||||| || |  | ||| ||||||| |||||| | || |||||||||||  |||||||||||      
T  24177427 ttgttgtgtgcaagtatgagttatatgtcccacatcggataaaagagtaaaggctgaacaccttataagtaagcggacccataaacccattgccttaaag 24177526  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||  |||||||||||  ||||||||    
T  24177527 tttttggtaagagtgtggcgtctctct 24177553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 29157565 - 29157683
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | |  ||||| || |  | ||||||||||| |||||| | ||| ||||||||||  |||||||||||| ||||| ||    
T  29157565 tgcaagtgtgagttatatgtcccacaccggataaaatagtaaaggttgaacaccttataagtaagacgacccataaatccattgccttaaggttttgggt 29157664  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  29157665 aagagtgtggtgtctctct 29157683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 232
Target Start/End: Original strand, 30253532 - 30253610
Alignment:
Q  154 agaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    |||||||||| || |||||| | |||| ||||||||| ||||||||||||| ||||| ||||||||||| |||||||||    
T  30253532 agaggttgaagaccttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctct 30253610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 6054604 - 6054677
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctc 231  Q
    ||||||||| |||||| | ||||||||||||||  |||||||||||| ||||| ||||||||||| ||||||||    
T  6054604 gttgaacaccttataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtggtgtctctc 6054677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 11845233 - 11845309
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | ||||||||||||||  |||||||||||| |||||  |||||||||| |||||||||    
T  11845233 aggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttggataagagtgtggtgtctctct 11845309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 36939899 - 36939764
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||| ||||||||| |||||||||||||| | || | ||| || |  | | ||||||||| |||||| | ||||||||||||||  ||||||||||||     
T  36939899 ttgttctgtgcaagtgtgagttatatgtcccaaatcgtataaaatagtaaaagttgaacaccttataagtaagaggacccataaatccattgccttaagg 36939800  T
Q  206 ttttgagtaagagtgtgatgtctctctcgcctatgc 241  Q
    ||||| |||| |||||| ||| ||||| || |||||    
T  36939799 ttttgggtaaaagtgtggtgtttctcttgcttatgc 36939764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 41910760 - 41910657
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    |||||||||| |||| |||||||||||||| | || ||||| || |  | |||||||| || |||||| ||||||||||||||||  ||||| |||||||    
T  41910760 ttgttgtgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaataccttataactgagaggacccataaacccattggcttaaga 41910661  T
Q  206 tttt 209  Q
    ||||    
T  41910660 tttt 41910657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 237
Target Start/End: Original strand, 43241487 - 43241618
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||| | | || ||||| ||||  | ||||||||||| |||||| | | ||||| |||||| | |||| ||||||     
T  43241487 ttgttgtgtgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacaccttataagtaaaaggactcataaacttattgacttaagg 43241586  T
Q  206 ttttgagtaagagtgtgatgtctctctcgcct 237  Q
    ||||  |||| ||| |||||||||||| ||||    
T  43241587 ttttaggtaaaagtatgatgtctctcttgcct 43241618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 232
Target Start/End: Original strand, 20599317 - 20599434
Alignment:
Q  117 aagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagta-- 214  Q
    |||| |||||||||||||| |||| ||||| ||||  | ||| | |||||||||||||| |||||||  ||||| ||||||||||||  ||||| |||      
T  20599317 aagtgtgagttatatgtcccatatcggataaaaaagtaaaggataaacactttataaataagaggacatataaactcattgccttaacgttttgggtaag 20599416  T
Q  215 agagtgtgatgtctctct 232  Q
    |||||||| |||||||||    
T  20599417 agagtgtggtgtctctct 20599434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 30244693 - 30244771
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacc 184  Q
    ||||||||||||||| |||||||||||||| | |||||||| || |  | ||||||||||| |||||||| ||||||||    
T  30244693 ttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataaataagaggacc 30244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 45433233 - 45433359
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||  | | || ||||| || |  | ||||||||||| |||||| | |||| || ||||||   ||||||||||||    
T  45433233 ttgttgtgtacaagtgtgagttatatgatccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaacctattgccttaaga 45433332  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  45433333 ttttgggtaagagtgtggtgtctctct 45433359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 118467 - 118351
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| | |||||||||||| | ||  |||||||||  | ||||||||||| | |||| | |||||| |||||||  |||| || ||||     
T  118467 ttgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaacacctaataagtaagaggatccataaacccattaccgtaagg 118368  T
Q  206 ttttgagtaagagtgtg 222  Q
    ||||| |||||||||||    
T  118367 ttttgggtaagagtgtg 118351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 19122773 - 19122845
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtct 228  Q
    ||||||||||| |||||| | ||||||| ||||||  |||||||||||| ||||| ||||||||||| |||||    
T  19122773 aggttgaacaccttataagtaagaggactcataaatccattgccttaaggttttgggtaagagtgtggtgtct 19122845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 1085415 - 1085288
Alignment:
Q  106 ttgttgtgtgcaagtatgagttat-atgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    ||||||||||||||| |||||| | |||||| |||| ||||| || |  | | ||||||||  | |||| | |||| ||||||||| |||||||||||||    
T  1085415 ttgttgtgtgcaagtgtgagtttttatgtcccatatcggataaaatagtaaaagttgaacaactcataagtaagagaacccataaactcattgccttaag 1085316  T
Q  205 attttgagtaagagtgtgatgtctctct 232  Q
     ||||| ||||||||||| ||| |||||    
T  1085315 gttttgggtaagagtgtggtgtttctct 1085288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 202
Target Start/End: Complemental strand, 28301708 - 28301613
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgcctta 202  Q
    |||||||||||||| |||||||||||||  | || ||||||||||  | | | ||||||| |||||| | ||||||||||||||  ||||||||||    
T  28301708 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaagctgaacaccttataagtaagaggacccataaacccattgcctta 28301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 40094940 - 40094814
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||  | || | ||| || |  | ||||| ||||| |||||| | ||||||||||||||  ||| | ||||||     
T  40094940 ttgttgtgtgcaagtgtgagttatatgtctcacatcgaataaaagagtaaaggttcaacaccttataagtaagaggacccataaacccatcgtcttaagg 40094841  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||||||||||  ||||||||    
T  40094840 ttttgggtaagagtgtggcgtctctct 40094814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 45754708 - 45754833
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | || ||||| || |  | | ||||||||| |||||| | ||| ||| ||||||  ||| ||||||||     
T  45754708 ttgttgtgtacaagtgtgagttatatgtcc-acatcggataaaatagtaaatgttgaacaccttataagtaagatgactcataaacccatagccttaagg 45754806  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  45754807 ttttgggtaagagtgtggtgtctctct 45754833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 23569091 - 23569043
Alignment:
Q  183 cccataaaatcattgccttaagattttgagtaagagtgtgatgtctctc 231  Q
    ||||||||  |||||||||||| ||||| ||||||||||||||||||||    
T  23569091 cccataaacccattgccttaaggttttgggtaagagtgtgatgtctctc 23569043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 9901706 - 9901761
Alignment:
Q  177 agaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    |||||| ||||||| |||||| |||||| ||||| ||||||||||| |||||||||    
T  9901706 agaggatccataaactcattgtcttaaggttttgggtaagagtgtggtgtctctct 9901761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 14681552 - 14681627
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctc 231  Q
    ||||||||||| || ||| | ||||| ||||||||  ||||| |||||| ||||| ||||||||||| ||||||||    
T  14681552 aggttgaacaccttgtaagtaagagggcccataaacccattgtcttaaggttttgggtaagagtgtggtgtctctc 14681627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 36622955 - 36623078
Alignment:
Q  109 ttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattt 208  Q
    |||||||||||| |||||||||||||| | || ||||| || |  | ||||| |||| ||||||| |  ||||| |||||||  |||||||||||| |||    
T  36622955 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacattttataagtaggaggatccataaatccattgccttaaggttt 36623054  T
Q  209 tgagtaagagtgtgatgtctctct 232  Q
    || ||| |||| || || ||||||    
T  36623055 tgggtaggagtatggtgcctctct 36623078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 28300342 - 28300293
Alignment:
Q  183 cccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||  |||||||||||||||||| |||||||||||  ||||||||    
T  28300342 cccataaacccattgccttaagattttgggtaagagtgtggcgtctctct 28300293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 36534950 - 36534825
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| | | |||||||||| |  | ||||| || |  ||||||||||||| |||||| | ||||||||||||||   |  | ||||||     
T  36534950 ttgttgtgtgcaagtgtaacttatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagaggacccataaacctaaagtcttaagg 36534851  T
Q  206 ttttgagtaagagtgtgatgtctctc 231  Q
    ||||| |||||||||||  |||||||    
T  36534850 ttttgggtaagagtgtggcgtctctc 36534825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 21416232 - 21416180
Alignment:
Q  181 gacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctc 233  Q
    ||||||||||  |||||||||| | ||||| ||||||||||| ||||||||||    
T  21416232 gacccataaacccattgccttagggttttgggtaagagtgtggtgtctctctc 21416180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 37393057 - 37393101
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaa 151  Q
    |||||||||||||| |||||||||||| | ||||| |||||||||    
T  37393057 tgttgtgtgcaagtttgagttatatgttccatattagatagaaaa 37393101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 39336087 - 39336007
Alignment:
Q  155 gaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctcgc 235  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  39336087 gaggttgaacactttataaatgataagactcataaaatcattgccttaaggttttgggtaagagtgtggtgtctctctcgc 39336007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 226
Target Start/End: Complemental strand, 46546490 - 46546371
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    ||||||||| |||| |||||||||||||||| ||||||| ||||    ||||||||||||||||||| | |||| | |||||||  |||||||||||| |    
T  46546490 tgttgtgtgtaagtgtgagttatatgtcctacattggattgaaatgtggaggttgaacactttataagttagagaatccataaacccattgccttaaggt 46546391  T
Q  207 tttgagtaagagtgtgatgt 226  Q
    |||| |||||||||||||||    
T  46546390 tttgtgtaagagtgtgatgt 46546371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 12114728 - 12114602
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| | |||||||| ||| | || ||||||||||  | ||||||||||| |||||| | ||||||||||||||  ||||| ||||||     
T  12114728 ttgttgtgtgcaagtgtaagttatatatcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaagg 12114629  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  12114628 ttttgggtaagagtgtggtgtctctct 12114602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 220
Target Start/End: Complemental strand, 21832508 - 21832395
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||| ||||||||| |||||||||||||| | |||||||||||||  | ||||||||||| |||||| | ||||||| |||||| |||| |||||||| |    
T  21832508 tgttatgtgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacaccttataagtaagaggactcataaactcatagccttaaggt 21832409  T
Q  207 tttgagtaagagtg 220  Q
    |||| |||||||||    
T  21832408 tttgggtaagagtg 21832395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 210
Target Start/End: Complemental strand, 39336392 - 39336291
Alignment:
Q  109 ttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattt 208  Q
    |||||||||||| |||||||||||||| | || ||||||||| |  ||||||||||||||||||| |||||||| ||||||| ||||||| ||||| |||    
T  39336392 ttgtgtgcaagtgtgagttatatgtcccacatcggatagaaagttggaggttgaacactttataagtgagaggatccataaactcattgctttaaggttt 39336293  T
Q  209 tg 210  Q
    ||    
T  39336292 tg 39336291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 15772846 - 15772972
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    |||| |||||||||| |||||||||||||| |||| ||||| || |  | | ||||||||| |||||| | |||||||||||||| ||||||| |||||     
T  15772846 ttgtcgtgtgcaagtgtgagttatatgtcccatatcggataaaagagtaaatgttgaacaccttataagtaagaggacccataaactcattgctttaagg 15772945  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    |||||  |||||||||| |||||||||    
T  15772946 ttttggataagagtgtggtgtctctct 15772972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 37991143 - 37991017
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||  | |||||||| || |  | ||||||||||| |||||| | |||||||| ||||| |||| ||||||||     
T  37991143 ttgttgtgtacaagtgtgagttatatgtctcacattggataaaatagtaaaggttgaacaccttataagtaagaggacctataaactcatcgccttaagg 37991044  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  37991043 ttttgggtaagagtgtggtgtctctct 37991017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 43346957 - 43346831
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | ||  |||| || |  | ||||||||||| |||||| | |||| ||||||||| |||||||||||||     
T  43346957 ttgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattgccttaagg 43346858  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  43346857 ttttgggtaagagtgtggtgtctctct 43346831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 232
Target Start/End: Complemental strand, 39935104 - 39934995
Alignment:
Q  123 gagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtg 222  Q
    ||||||||||||||| || ||||| || |  | ||||||||||| |||||| | |||||| |||||||  |||||||||||  |||||||||||||||||    
T  39935104 gagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaagttttgagtaagagtgtg 39935005  T
Q  223 atgtctctct 232  Q
    ||||||||||    
T  39935004 atgtctctct 39934995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 32463067 - 32462940
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaa-tgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    ||||||||| ||||| |||||||||||||| | || |||||||| | | | |||||||| || |||||| | ||| ||| ||||||  ||||||||||||    
T  32463067 ttgttgtgtacaagtgtgagttatatgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaacccattgccttaag 32462968  T
Q  205 attttgagtaagagtgtgatgtctctct 232  Q
     ||||||||||||||||| |||||||||    
T  32462967 gttttgagtaagagtgtggtgtctctct 32462940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 233
Target Start/End: Original strand, 39914244 - 39914371
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||  | ||  |||| || |  ||||||||||||| |||||||| ||||||||||||||   | |||||||| |    
T  39914244 ttgttgtgtgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaacaccttataaataagaggacccataaacctaatgccttaata 39914343  T
Q  206 ttttgagtaagagtgtgatgtctctctc 233  Q
    |||||  |||||||||| ||||||||||    
T  39914344 ttttggataagagtgtggtgtctctctc 39914371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 54017983 - 54017856
Alignment:
Q  105 attgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||||||||||| |||||||||||||||| || ||||| || |  | ||||||||||| |||||| | ||||||| ||||||   |  ||||||||    
T  54017983 attgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaacctaacgccttaag 54017884  T
Q  205 attttgagtaagagtgtgatgtctctct 232  Q
     ||||| ||||||||||| |||||||||    
T  54017883 gttttgggtaagagtgtggtgtctctct 54017856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 32589696 - 32589821
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| ||||| |||||||| | ||  |||| || |  | ||||||||||| |||||| | ||||||||||||||  ||||||||||||     
T  32589696 ttgttgtgtgcaagtgtgagt-atatgtcccacataagataaaataataaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 32589794  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||| |||||||||||    
T  32589795 ttttgggtaagagtgcgatgtctctct 32589821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 37990805 - 37990679
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||| | | || ||||| || |  | | ||||||||| |||||| | ||||||| |||||| |||||||||||||     
T  37990805 ttgttgtgtacaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggactcataaactcattgccttaagg 37990706  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  37990705 ttttgggtaagagtgtggtgtctctct 37990679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 42342554 - 42342428
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | ||  |||| || |  | ||||| ||||| |||||| | ||||||||||||||  ||||| ||||||     
T  42342554 ttgttgtgtgcaagtgtgagttatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaatccattgtcttaagg 42342455  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||||||||||| ||||||||    
T  42342454 ttttgggtaagagtgtgacgtctctct 42342428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 47964683 - 47964557
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||| |||||||   || |||||||||    |||||||||| || ||||| ||||||||||||||||   ||||||||||| |    
T  47964683 tgttgtgtgcaagtgtgagttgtatgtcccgcatcggatagaaatgtggaggttgaacgctatataagtgagaggacccataaacctattgccttaaggt 47964584  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||| |||||||||||  |||||||||    
T  47964583 tttgggtaagagtgtggcgtctctctc 47964557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 47965080 - 47964954
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| ||||||||||||  || || ||||||||||   |||||| |||| | ||||| ||||||| | |||||   ||||||||||||||    
T  47965080 tgttgtgtgcaagtgtgagttatatgttttacatcggatagaaaagtggaggttaaacattatataagtgagagggctcataagcccattgccttaagat 47964981  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||| |||||||||||  |||||||||    
T  47964980 tttgggtaagagtgtggcgtctctctc 47964954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 35946515 - 35946640
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||| ||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  | |||||||||| |    
T  35946515 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataaacccgttgccttaaggt 35946614  T
Q  207 tttgagtaagagtgtgatgtctctct 232  Q
    |||| |||| |||||| |||||||||    
T  35946615 tttgggtaaaagtgtggtgtctctct 35946640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 233
Target Start/End: Complemental strand, 1634477 - 1634353
Alignment:
Q  110 tgtgtgcaagtatgagttatatgtcctatattggatagaaaa-tgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattt 208  Q
    ||||||||||| |||||||||||||| | || |||||||||| | | ||||| ||||| |||||| | ||||||||||||||  ||||| |||||| |||    
T  1634477 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaaaataaaaggttaaacacattataagtaagaggacccataaacccattggcttaaggttt 1634378  T
Q  209 tgagtaagagtgtgatgtctctctc 233  Q
    || ||||||||| | | ||||||||    
T  1634377 tgggtaagagtgcggtatctctctc 1634353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 230
Target Start/End: Original strand, 39389070 - 39389186
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||||| || ||||| || |  | ||||||||||| ||| || | ||||||||||||||  ||||| |||||| ||||| ||    
T  39389070 tgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttaaaactaagaggacccataaacccattgtcttaaggttttgggt 39389169  T
Q  214 aagagtgtgatgtctct 230  Q
    ||||||||| |||||||    
T  39389170 aagagtgtggtgtctct 39389186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 241
Target Start/End: Complemental strand, 29645068 - 29644933
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| | |||||||||||| | || ||||| || |  | ||||| ||||| |||||| | ||||||||||||||  ||||| ||||||     
T  29645068 ttgttgtgtgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagaggacccataaacccattgtcttaagg 29644969  T
Q  206 ttttgagtaagagtgtgatgtctctctcgcctatgc 241  Q
    ||||| |||||||||||  |||||||| || |||||    
T  29644968 ttttgggtaagagtgtggcgtctctcttgcttatgc 29644933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 233
Target Start/End: Complemental strand, 53118140 - 53118014
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    |||||||| |||||| |||||||||||| | |||| ||||| || |  | ||||||||||| |||||| ||||||||  || |||  |||||||||||||    
T  53118140 ttgttgtgggcaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtgagaggattca-aaacccattgccttaaga 53118042  T
Q  206 ttttgagtaagagtgtgatgtctctctc 233  Q
    ||||| ||||||||||  ||||||||||    
T  53118041 ttttgggtaagagtgtagtgtctctctc 53118014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 22304569 - 22304687
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||| ||||||||| | || ||||| || |  | |||||||| || |||||| | ||||||||||||||  |||||||||||| ||||| ||    
T  22304569 tgcaagtgtgagctatatgtcccacatcggataaaatagtaaaggttgaataccttataagtaagaggacccataaacacattgccttaaggttttgggt 22304668  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  22304669 aagagtgtggtgtctctct 22304687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 25739591 - 25739465
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | || ||||| || |  | | ||||||||   ||||| | |||||||||||||| ||||||| || ||     
T  25739591 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagaggacccataaactcattgcttttagg 25739492  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||||||||||| ||||||||    
T  25739491 ttttgggtaagagtgtgacgtctctct 25739465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 52634668 - 52634793
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | || ||||| || |  | ||||||||| | |||||| | |||| |||||||||  ||||||||||||     
T  52634668 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaagag-acccataaacccattgccttaagg 52634766  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||||||||||| ||||||||    
T  52634767 ttttgggtaagagtgtgacgtctctct 52634793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 52634994 - 52635048
Alignment:
Q  168 ttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtg 222  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||    
T  52634994 ttataaataagaggacccataaactcattgccttaagattttgggtaagagtgtg 52635048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 230
Target Start/End: Original strand, 15773184 - 15773308
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | || | ||| || |  | | ||||||||  |||||| | ||||||| |||||  ||||||||||||      
T  15773184 ttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagaggactcataagctcattgccttaaag 15773283  T
Q  206 ttttgagtaagagtgtgatgtctct 230  Q
    ||||| |||||||||||||||||||    
T  15773284 ttttgggtaagagtgtgatgtctct 15773308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 29644744 - 29644612
Alignment:
Q  109 ttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattt 208  Q
    |||||||||||| |||||||||||||| | || ||||  || |  | ||||||||||| |||||| | |||| |||||||||  ||||| |||||| |||    
T  29644744 ttgtgtgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggttgaacaccttataagtaagagaacccataaacccattgtcttaaggttt 29644645  T
Q  209 tgagtaagagtgtgatgtctctctcgcctatgc 241  Q
    || |||||||||||  |||||||| || |||||    
T  29644644 tgggtaagagtgtggcgtctctcttgcttatgc 29644612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 45901705 - 45901832
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaa-aatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    ||||||||| ||||| |||||||||||||| | || ||||| || ||  | ||||||||||| |||||| | ||||||| |||||| |||| |||||||     
T  45901705 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagaaaaaaaggttgaacaccttataagtaagaggacgcataaactcatggccttaaa 45901804  T
Q  205 attttgagtaagagtgtgatgtctctct 232  Q
     ||||  ||||||||||| |||||||||    
T  45901805 gtttttggtaagagtgtggtgtctctct 45901832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 4823719 - 4823769
Alignment:
Q  178 gaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtct 228  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  4823719 gaggacccataaactcattgccttaagattttgggtaagagtgtggtgtct 4823769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 233
Target Start/End: Original strand, 9240142 - 9240268
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||| | | || ||||||| ||  | | | ||||||| |||||| | ||||||||||||||  |||| |||||||||    
T  9240142 tgttgtgtgcaagtgtgagttatatgttccacatcggatagagaagtaaaagctgaacaccttataagtaagaggacccataaatccattaccttaagat 9240241  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    || |  ||||| |||| ||||||||||    
T  9240242 ttcggataagaatgtggtgtctctctc 9240268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 54018364 - 54018239
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||| ||||||||| |||||||||||||||  || ||||| || |  | || |||||||| |||||| | ||||||||||||||   |  ||||||||     
T  54018364 ttgttatgtgcaagtgtgagttatatgtcctgcatcggataaaagagtaaagattgaacaccttataagtaagaggacccataaacctaacgccttaagg 54018265  T
Q  206 ttttgagtaagagtgtgatgtctctc 231  Q
    ||||| ||||||||||| ||||||||    
T  54018264 ttttgggtaagagtgtggtgtctctc 54018239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 33803417 - 33803302
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||| | |||||||||||||| | || ||||| || |  | |||||||||||  ||||| | ||||||||||||||  |||||| ||||| |    
T  33803417 tgttgtgtgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgcattaaggt 33803318  T
Q  207 tttgagtaagagtgtg 222  Q
     ||| |||||||||||    
T  33803317 attgggtaagagtgtg 33803302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 41359881 - 41359802
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctcgc 235  Q
    |||||||| || |||||| | ||||||||||||||  |||||||||||| ||||| |||||| ||||  |||||||||||    
T  41359881 aggttgaataccttataagtaagaggacccataaacccattgccttaaggttttgggtaagaatgtggcgtctctctcgc 41359802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 44160711 - 44160585
Alignment:
Q  105 attgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||||| ||||||| | ||||||||||   |||||||||| || |  | ||||||||||| |||||||| |||||| |||||||  ||||| ||||||    
T  44160711 attgttgtatgcaagtgtcagttatatgtttcatattggataaaacaataaaggttgaacaccttataaataagaggatccataaacccattgtcttaag 44160612  T
Q  205 attttgagtaagagtgtgatgtctctct 232  Q
     ||||| |||||| ||||  ||||||||    
T  44160611 gttttg-gtaagaatgtggcgtctctct 44160585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 204
Target Start/End: Complemental strand, 7767476 - 7767382
Alignment:
Q  110 tgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag 204  Q
    |||||| |||| |||||||||||||| | || ||||||||||  | |||||| ||||||||||| | ||||||| ||||||  ||||| ||||||    
T  7767476 tgtgtgtaagtctgagttatatgtcccacatcggatagaaaagtaaaggttggacactttataactaagaggactcataaacccattgtcttaag 7767382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 42584970 - 42584864
Alignment:
Q  124 agttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtga 223  Q
    |||||||||||| | || |||||||| |  | || |||||||| |||||| | |||||| |||||||   |||| |||||||||||||| |||||||||     
T  42584970 agttatatgtcccacatcggatagaagagtaaagattgaacaccttataagtaagaggatccataaaccaattgtcttaagattttgagaaagagtgtgg 42584871  T
Q  224 tgtctct 230  Q
    |||||||    
T  42584870 tgtctct 42584864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 49336853 - 49336727
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| ||||||| |||||  | || ||||||||||  | ||||||| ||| |||||| | ||||||||||||||  ||| | |||||      
T  49336853 ttgttgtgtacaagtgtgagttacatgtctcacatcggatagaaaagtaaaggttgaccaccttataagtaagaggacccataaacccatagtcttaaag 49336754  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    || || ||||||||||| |||||||||    
T  49336753 ttctgggtaagagtgtggtgtctctct 49336727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 53577356 - 53577482
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||  | || ||||| || |  | ||||||||||  ||| |||| || ||| |||||||   |||||||||||     
T  53577356 ttgttgtgtgcaagtgtgagttatatgtcacacatcggataaaacagtaaaggttgaacatcttaaaaataagtggatccataaacatattgccttaagg 53577455  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    | ||| ||||||||||| |||||||||    
T  53577456 tcttgggtaagagtgtggtgtctctct 53577482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 31190009 - 31190127
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| ||||| |||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||        ||||||||     
T  31190009 ttgttgtgtgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagaggacccata--------gccttaagg 31190100  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  31190101 ttttgggtaagagtgtggtgtctctct 31190127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 233
Target Start/End: Complemental strand, 45395821 - 45395692
Alignment:
Q  104 aattgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaa 203  Q
    ||||||||||||||||| | |||||||| ||| | || | ||| || |  | ||||| ||||| |||||| | |||||| |||||||  ||||| |||||    
T  45395821 aattgttgtgtgcaagtgtaagttatatatcccacatcgaataaaagagtaaaggttaaacacgttataagtaagaggatccataaacccattgtcttaa 45395722  T
Q  204 gattttgagtaagagtgtgatgtctctctc 233  Q
      ||||| ||||||||||| ||||||||||    
T  45395721 tgttttgggtaagagtgtggtgtctctctc 45395692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 33175829 - 33175711
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaa---tcattgccttaa 203  Q
    |||||||| ||||| |||||||||||||  | ||  |||||||||  | ||||||||||| |||||| | |||| |||||||| |   |||| |||||||    
T  33175829 tgttgtgtacaagtgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacaccttataagtaagagaacccataataaactcatagccttaa 33175730  T
Q  204 gattttgagtaagagtgtg 222  Q
    | ||||| |||||||||||    
T  33175729 ggttttgggtaagagtgtg 33175711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 42342194 - 42342130
Alignment:
Q  168 ttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    |||||| | ||||||| |||||| ||||||||||||| ||||| |||||||||||  ||||||||    
T  42342194 ttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggcgtctctct 42342130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 3135237 - 3135113
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| |||||  ||||||||||||| | || ||||| || |  | | ||||||||| |||||| | | || |||||||||  || |||| ||||     
T  3135237 ttgttgtgtacaagt--gagttatatgtcccacatcggataaaatagtaaatgttgaacaccttataagtaaaagaacccataaacccactgccataagg 3135140  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||||||||| |||||||||    
T  3135139 ttttgagtaagagtgtggtgtctctct 3135113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 22303754 - 22303699
Alignment:
Q  177 agaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||||||  |||||||||||| ||||| ||||||||||| ||| |||||    
T  22303754 agaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttctct 22303699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 12747919 - 12747873
Alignment:
Q  105 attgttgtgtgcaagtatgagttatatgtcctatattggatagaaaa 151  Q
    |||||||||||||||| |||||||||||||| | || ||||||||||    
T  12747919 attgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaa 12747873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 16868471 - 16868429
Alignment:
Q  184 ccataaaatcattgccttaagattttgagtaagagtgtgatgt 226  Q
    ||||||| |||||||||||||||||||  ||||||||||||||    
T  16868471 ccataaactcattgccttaagattttggataagagtgtgatgt 16868429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 25317199 - 25317265
Alignment:
Q  155 gaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgt 221  Q
    |||||||| |||||| ||| |||||||||||||||| |  |||||||||| ||||| |||| |||||    
T  25317199 gaggttgagcactttgtaactgagaggacccataaacttgttgccttaaggttttgggtaaaagtgt 25317265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 213
Target Start/End: Original strand, 32930690 - 32930787
Alignment:
Q  117 aagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgcctta-agattttgagt 213  Q
    |||||||||||| | ||| |||||||  |||||||  ||| |||||||| ||||||| ||||| ||| |||||| ||| || |||| |||||||||||    
T  32930690 aagtatgagttagaagtcttatattgtttagaaaagtagaagttgaacattttataagtgagatgactcataaactcaatgtcttagagattttgagt 32930787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 17731994 - 17731954
Alignment:
Q  182 acccataaaatcattgccttaagattttgagtaagagtgtg 222  Q
    |||||||||  |||||||||||| |||||||||||||||||    
T  17731994 acccataaacccattgccttaaggttttgagtaagagtgtg 17731954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 19033225 - 19033185
Alignment:
Q  182 acccataaaatcattgccttaagattttgagtaagagtgtg 222  Q
    |||||||||  |||||||||||| |||||||||||||||||    
T  19033225 acccataaacccattgccttaaggttttgagtaagagtgtg 19033185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 22304047 - 22303995
Alignment:
Q  180 ggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    |||||||||||  |||||||||||| |||||  |||||||||| |||||||||    
T  22304047 ggacccataaacccattgccttaaggttttggataagagtgtggtgtctctct 22303995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 33362409 - 33362349
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaag 216  Q
    |||||||| || |||||| | ||||||||||||||  |||| ||||||||||||| |||||    
T  33362409 aggttgaataccttataagtaagaggacccataaacccatttccttaagattttgggtaag 33362349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 53596542 - 53596594
Alignment:
Q  181 gacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctc 233  Q
    ||||||||||  ||||| |||||||||||  ||||||||||| ||||||||||    
T  53596542 gacccataaacccattgacttaagattttaggtaagagtgtggtgtctctctc 53596594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 4e-22; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 41632775 - 41632900
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| | |||||||||||  | || ||||||||||  | ||||||||||| |||||| | ||||||||||||||  || ||| |||||||    
T  41632775 tgttgtgtgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccaatgctttaagat 41632874  T
Q  207 tttgagtaagagtgtgatgtctctct 232  Q
    |||| ||||||||||| |||||||||    
T  41632875 tttgggtaagagtgtggtgtctctct 41632900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 26074607 - 26074731
Alignment:
Q  109 ttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattt 208  Q
    |||||| ||||| |||||||||||| | |||| ||||| || |  | ||||||||||| |||||| | ||||||||||||||  |||||||||||| |||    
T  26074607 ttgtgtacaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttt 26074706  T
Q  209 tgagtaagagtgtgatgtctctctc 233  Q
    || ||||||||||| ||||||||||    
T  26074707 tgggtaagagtgtggtgtctctctc 26074731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 36522061 - 36521946
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    ||||||| |||||| |||||||||||||| | ||  |||||||||   ||||||||||||| | ||||||||||||||||||||   ||||||||||| |    
T  36522061 tgttgtgcgcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttgaacactctttaaatgagaggacccataaaccaattgccttaaggt 36521962  T
Q  207 tttgagtaagagtgtg 222  Q
    |||| |||||||||||    
T  36521961 tttgggtaagagtgtg 36521946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 36568732 - 36568606
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||| | || ||||||||||  | | ||||||||| |||||| ||||| ||||| ||||  |||||||||||| |    
T  36568732 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgacccgtaaacccattgccttaaggt 36568633  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||  |||||||||||  |||||||||    
T  36568632 ttttggtaagagtgtggcgtctctctc 36568606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 232
Target Start/End: Complemental strand, 40296477 - 40296355
Alignment:
Q  110 tgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagatttt 209  Q
    ||||||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  ||||||||| || ||||    
T  40296477 tgtgtgcaagtgtgagttatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagaggacccataaacccattgccttgaggtttt 40296378  T
Q  210 gagtaagagtgtgatgtctctct 232  Q
    | ||||||||||| |||||||||    
T  40296377 gggtaagagtgtggtgtctctct 40296355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 9498770 - 9498694
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | ||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||    
T  9498770 aggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgggtaagagtgtggtgtctctct 9498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 31509614 - 31509710
Alignment:
Q  105 attgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgcctt 201  Q
    |||||||||||||||| |||||||||||||  | || ||||||||||   |||||||| |||||||||| ||||||||| |||||| ||||||||||    
T  31509614 attgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagaggactcataaactcattgcctt 31509710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 6500823 - 6500940
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||||| | |||||||||||| ||||||||||||| |||||  |    
T  6500823 tgcaagtgtgagttatatgtcc-acatcggataaaatagtaaaggttgaacaccttataaataaaaggacccataaactcattgccttaaggttttggat 6500921  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  6500922 aagagtgtggtgtctctct 6500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 26074311 - 26074185
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||  | || ||||| ||||  | ||||||||||| | |||  | ||||||||||| ||  |||||||||||| |    
T  26074311 tgttgtgtgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaacacctcatatgtaagaggacccatgaacccattgccttaaggt 26074212  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||| ||||||||||| ||||||||||    
T  26074211 tttgggtaagagtgtggtgtctctctc 26074185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 36522402 - 36522276
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||| || |||| |||||||||||||  | |||||||||||||   || |||||||| ||||||| |||||||||| |||||  ||||  |||||| |    
T  36522402 tgttgtatgaaagtgtgagttatatgtctcacattggatagaaaaatggaagttgaacattttataagtgagaggaccaataaacccattatcttaaggt 36522303  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||| ||||||||||| ||||||||||    
T  36522302 tttgggtaagagtgtggtgtctctctc 36522276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 106 - 222
Target Start/End: Original strand, 299481 - 299597
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    |||||||| |||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||| |||||||||| |||| ||||||||     
T  299481 ttgttgtgcgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagatgacccataaactcatagccttaagg 299580  T
Q  206 ttttgagtaagagtgtg 222  Q
    ||||| |||||||||||    
T  299581 ttttgtgtaagagtgtg 299597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 11417141 - 11417017
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    |||||||||||||||  ||||||||||| | | || ||||| || |  | ||||||||||| |||||| | |||||| |||||||  ||||||||||||     
T  11417141 ttgttgtgtgcaagt--gagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaagg 11417044  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||||| |||||||    
T  11417043 ttttgtgtaagagtgtgatctctctct 11417017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 233
Target Start/End: Original strand, 38427556 - 38427666
Alignment:
Q  122 tgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgt 221  Q
    |||||||||||||| | |||||||||||||  | ||||||||||  |||||| | ||||||||||| ||  ||||| |||||| ||||| ||||||||||    
T  38427556 tgagttatatgtcccacattggatagaaaagtaaaggttgaacatcttataagt-agaggacccattaatccattgtcttaaggttttgtgtaagagtgt 38427654  T
Q  222 gatgtctctctc 233  Q
    || |||||||||    
T  38427655 gacgtctctctc 38427666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 233
Target Start/End: Complemental strand, 1028682 - 1028556
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||| ||||| |||||||||||||| | || ||||||||||  | ||| |||||||||||||| | ||||||||||||||   ||  ||||||| |    
T  1028682 tgttgtgtacaagtgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagaggacccataaacctataaccttaaggt 1028583  T
Q  207 tttgagtaagagtgtgatgtctctctc 233  Q
    |||  |||||||||||  |||||||||    
T  1028582 ttttggtaagagtgtggcgtctctctc 1028556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 15370091 - 15370217
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | || | ||| || |  | ||||||||||  |||||| | ||||||||||||||  ||  ||||||||     
T  15370091 ttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaatccacagccttaagg 15370190  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  15370191 ttttgggtaagagtgtggtgtctctct 15370217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 25327927 - 25328053
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    |||||||||  |||| |||||||||||||||| || ||||| || |  | | ||||||||| |||||| | ||||||||||||||   | |||||||||     
T  25327927 ttgttgtgtctaagtgtgagttatatgtcctacatcggataaaacagtaaaagttgaacaccttataagtaagaggacccataaacctaatgccttaagg 25328026  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| ||||||||||| |||||||||    
T  25328027 ttttgggtaagagtgtggtgtctctct 25328053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 27502194 - 27502076
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | |||||||| || |  | ||||| ||||| |||||| | ||||||||||||||   ||||||||||||||||  ||    
T  27502194 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagaggacccataaacctattgccttaagatttttggt 27502095  T
Q  214 aagagtgtgatgtctctct 232  Q
    || |||||| |||||||||    
T  27502094 aaaagtgtggtgtctctct 27502076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 34753191 - 34753065
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||| | | |||||||||||| | |||||||||||||  | | ||||||||| |||||| | ||| ||||||||||   |||||||||||     
T  34753191 ttgttgtgtacaaatgtaagttatatgtcccacattggatagaaaagtaaaagttgaacaccttataagtaagaagacccataaaccgattgccttaagg 34753092  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||||||||||  ||||||||    
T  34753091 ttttgggtaagagtgtggcgtctctct 34753065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 232
Target Start/End: Complemental strand, 13415925 - 13415800
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||||||||| |||||||||||||| | || ||||| |  |  | ||||||||||| |||||| | ||||||||||||||   ||| ||||||| |    
T  13415925 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaattagtaaaggttgaacaccttataagtaagaggacccataaacctattaccttaaggt 13415826  T
Q  207 tttgagtaagagtgtgatgtctctct 232  Q
    |||| |||||||||||  ||||||||    
T  13415825 tttgggtaagagtgtggcgtctctct 13415800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 26591026 - 26590949
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctc 233  Q
    ||||||||||| |||||| | |||||| ||||||| ||| ||||||||| |||||||||||||||||  |||||||||    
T  26591026 aggttgaacaccttataagtaagaggatccataaattcaatgccttaaggttttgagtaagagtgtggcgtctctctc 26590949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 2411010 - 2411114
Alignment:
Q  117 aagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaag 216  Q
    |||| |||||||||||||||| |||||||||| ||  | | ||||||||  || ||| | |||| ||||||||| | ||||||||||| |||||||||||    
T  2411010 aagtgtgagttatatgtcctacattggatagagaagtaaaagttgaacatcttgtaagtaagagaacccataaacttattgccttaaggttttgagtaag 2411109  T
Q  217 agtgt 221  Q
    |||||    
T  2411110 agtgt 2411114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 222
Target Start/End: Original strand, 6224188 - 6224304
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| |  | ||||| || |  | ||||||||||| |||||| | |||||||||||||| |||| ||||||||     
T  6224188 ttgttgtgtacaagtgtgagttatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcatcgccttaagg 6224287  T
Q  206 ttttgagtaagagtgtg 222  Q
    ||||  |||||||||||    
T  6224288 tttttggtaagagtgtg 6224304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 12662818 - 12662702
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||||||||| |||||||||||||| | || ||||| || |  | |||||||||| ||||||| | |||  |||||||||  ||||| ||||||     
T  12662818 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaagaaaacccataaatccattgtcttaagt 12662719  T
Q  206 ttttgagtaagagtgtg 222  Q
    ||||| |||||||||||    
T  12662718 ttttgggtaagagtgtg 12662702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 33747813 - 33747889
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||| || ||||||||| | |||||| ||||||| |||||||||||||||||||  |||||||||| |||||||||    
T  33747813 aggttaaatactttataagtaagaggatccataaactcattgccttaagattttggataagagtgtggtgtctctct 33747889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 624196 - 624315
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | |||| ||| || |  | ||||||||||| |||||| | ||| ||||||||||  ||| ||||| || ||||| ||    
T  624196 tgcaagtgtgagttatatgtcccacattgtataaaatagtaaaggttgaacacgttataagtaagatgacccataaacccatagccttgaggttttgggt 624295  T
Q  214 aagagtgtgatgtctctctc 233  Q
    ||||||||| ||||||||||    
T  624296 aagagtgtggtgtctctctc 624315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 6500451 - 6500568
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | ||||||||  ||||  |||||||||||| ||||| ||    
T  6500451 tgcaagtgtgagttatatgtcc-acatcggataaaatagtaaaggttgaacaccttataagtaagaggacctttaaacccattgccttaaggttttgggt 6500549  T
Q  214 aagagtgtgatgtctctct 232  Q
    ||||||||| |||||||||    
T  6500550 aagagtgtggtgtctctct 6500568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 18603236 - 18603170
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtg 222  Q
    ||||||||||| |||||| | ||||||||||||||  |||||||||||| ||||| |||||||||||    
T  18603236 aggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 18603170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 32487394 - 32487511
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| | |||| | ||||||||||||||  |||||||||||| ||||| ||    
T  32487394 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacct-ataagtaagaggacccataaacccattgccttaaggttttgggt 32487492  T
Q  214 aagagtgtgatgtctctct 232  Q
    |||||||||| || |||||    
T  32487493 aagagtgtgacgtatctct 32487511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 36492383 - 36492257
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||| ||||||| |||||||||||||| | || ||||| || |  | ||||||||||| |||||| | |||||||| |||||  |||| |||| ||     
T  36492383 ttgttgtttgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggaccaataaacacattacctttagg 36492284  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    |||||  |||||||||| |||||||||    
T  36492283 ttttggataagagtgtggtgtctctct 36492257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 19275522 - 19275649
Alignment:
Q  104 aattgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaa 203  Q
    ||||||||||||||||| |||   ||||||| || ||  |||||||||  ||||||||||||||| ||||   ||| |||||||||| |||||| |||||    
T  19275522 aattgttgtgtgcaagtgtga---atatgtcttaaatcagatagaaaagtagaggttgaacactt-ataaggaagaagacccataaattcattgtcttaa 19275617  T
Q  204 gattttgagtaagagtgtgatgtctctctcgc 235  Q
    ||||||| |||||| ||||  |||| ||||||    
T  19275618 gattttgggtaagattgtggcgtctgtctcgc 19275649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 3295460 - 3295385
Alignment:
Q  156 aggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||||| |||||| | ||||||||||||||   ||||||||||| ||||| ||||||||||| |||||||||    
T  3295460 aggttgaacaccttataagtaagaggacccataaaccaattgccttaaggttttg-gtaagagtgtgttgtctctct 3295385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 13786116 - 13786040
Alignment:
Q  157 ggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctc 233  Q
    ||||||||||||||||| | ||| ||||| ||||   |||| ||||||||||||  |||||||||||||||||||||    
T  13786116 ggttgaacactttataagtaagatgacccgtaaatctattgtcttaagattttggataagagtgtgatgtctctctc 13786040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 222
Target Start/End: Complemental strand, 24489369 - 24489256
Alignment:
Q  107 tgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagat 206  Q
    |||||||| ||||| |||||||||||||| | ||  |||||||||  | ||||| ||||| |||| | | |||  |||||||||  ||||||||||||||    
T  24489369 tgttgtgttcaagtgtgagttatatgtcccacatcagatagaaaagaaaaggttaaacaccttattagtaaga--acccataaacccattgccttaagat 24489272  T
Q  207 tttgagtaagagtgtg 222  Q
    |||| |||||||||||    
T  24489271 tttgcgtaagagtgtg 24489256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 122 - 222
Target Start/End: Original strand, 41170642 - 41170742
Alignment:
Q  122 tgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgt 221  Q
    |||||||||||||| | || ||||| || |  | ||||||||||  |||||| | ||||||||||||||  |||||||||||| ||||| ||||||||||    
T  41170642 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 41170741  T
Q  222 g 222  Q
    |    
T  41170742 g 41170742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 233
Target Start/End: Original strand, 623818 - 623937
Alignment:
Q  114 tgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagt 213  Q
    ||||||| |||||||||||||  | || ||||| || |  | ||||||||||||||| || | ||  || ||||||| | || |||||||| ||||||||    
T  623818 tgcaagtgtgagttatatgtctcacatcggatataatagtaaaggttgaacactttacaagtaagttgagccataaacttatagccttaaggttttgagt 623917  T
Q  214 aagagtgtgatgtctctctc 233  Q
    ||||||||| ||||||||||    
T  623918 aagagtgtggtgtctctctc 623937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 26075328 - 26075201
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| ||| |||||||||  | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  ||||||||||||     
T  26075328 ttgttgtgtacaagtgtgatttatatgtctcacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 26075229  T
Q  206 ttttgagt-aagagtgtgatgtctctct 232  Q
    ||||| || |||||||||  ||||||||    
T  26075228 ttttgggtaaagagtgtgtcgtctctct 26075201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 110 - 232
Target Start/End: Complemental strand, 3295176 - 3295055
Alignment:
Q  110 tgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagatttt 209  Q
    ||||||||||| ||||| |||||||| | || ||||| || |  | ||||||||||| |||||| | ||| ||||||||||  ||||||||| || ||||    
T  3295176 tgtgtgcaagtgtgagt-atatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaacccattgccttgaggtttt 3295078  T
Q  210 gagtaagagtgtgatgtctctct 232  Q
    | ||| ||||||| |||||||||    
T  3295077 gggtatgagtgtggtgtctctct 3295055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 232
Target Start/End: Original strand, 15370446 - 15370520
Alignment:
Q  158 gttgaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctct 232  Q
    ||||||||| |||||| | ||||||||||||||  ||| |||||||| ||||| |||||||||||  ||||||||    
T  15370446 gttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgcgtaagagtgtggcgtctctct 15370520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 31509759 - 31509853
Alignment:
Q  142 ggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaagattttgag-taagagtgtgatgtctctctcgc 235  Q
    ||||||||||   |||||||| |||||||||| ||||||||| |||||| |||||||||| || ||||  | ||||| |||| ||||||||||||    
T  31509759 ggatagaaaagtggaggttgagcactttataagtgagaggactcataaactcattgccttgaggttttttggtaagaatgtggtgtctctctcgc 31509853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 36527192 - 36527134
Alignment:
Q  175 tgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctc 233  Q
    |||||||| |||||||  ||||||||||||||||||  |||||||||| ||||||||||    
T  36527192 tgagaggatccataaacgcattgccttaagattttggataagagtgtgctgtctctctc 36527134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 230
Target Start/End: Complemental strand, 42405762 - 42405638
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | || ||||| || |  | ||||||||||| ||| || | | ||||| ||||||   | |||||||||     
T  42405762 ttgttgtgtacaagtgtgagttatatgtccaacatcggataaaatagtaaaggttgaacaccttacaagtaaaaggactcataaacctaatgccttaagg 42405663  T
Q  206 ttttgagtaagagtgtgatgtctct 230  Q
    ||||| ||||||||||| |||||||    
T  42405662 ttttgggtaagagtgtggtgtctct 42405638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 13042606 - 13042658
Alignment:
Q  181 gacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctc 233  Q
    ||||||||||  |||||||||||| |||||  |||||||||| ||||||||||    
T  13042606 gacccataaacccattgccttaaggttttggataagagtgtggtgtctctctc 13042658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 230
Target Start/End: Original strand, 5769 - 5898
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaag- 204  Q
    ||||||||||||||| |||||||||||||  | || ||||| || |  | ||||||||||| |||||| | ||||||||||||||  ||||||||||||     
T  5769 ttgttgtgtgcaagtgtgagttatatgtcgcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaga 5868  T
Q  205 ----attttgagtaagagtgtgatgtctct 230  Q
        |||||||||||||||||| |||||||    
T  5869 ttaaattttgagtaagagtgtggtgtctct 5898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 232
Target Start/End: Original strand, 5388 - 5515
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgcctt-aag 204  Q
    ||||||||||||||| |||||||||||||||| || ||||| || |  | ||||||||||| |||||| | ||||| ||||||||   |||| ||| |||    
T  5388 ttgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagggcccataaacatattgtcttaaag 5487  T
Q  205 attttgagtaagagtgtgatgtctctct 232  Q
     ||||| ||||||||||| |||||||||    
T  5488 tttttgggtaagagtgtggtgtctctct 5515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 228
Target Start/End: Complemental strand, 680 - 558
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||  ||||| |||||||||||||| | || || || || |  | ||||||||||| |||||| | ||||||||||||||  ||||||||||||     
T  680 ttgttgtgcacaagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 581  T
Q  206 ttttgagtaagagtgtgatgtct 228  Q
    ||||| ||||||||||| |||||    
T  580 ttttgggtaagagtgtggtgtct 558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 232
Target Start/End: Complemental strand, 1272 - 1146
Alignment:
Q  106 ttgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgccttaaga 205  Q
    ||||||||| ||||| |||||||||||||| | |||||||| || |  | ||||||||||| ||||||   | ||||| ||||||  ||||||||||||     
T  1272 ttgttgtgtacaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagaaaaaggactcataaacccattgccttaagg 1173  T
Q  206 ttttgagtaagagtgtgatgtctctct 232  Q
    ||||| |||||||| || |||||||||    
T  1172 ttttgggtaagagtatggtgtctctct 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 1802 - 1730
Alignment:
Q  161 gaacactttataaatgagaggacccataaaatcattgccttaagattttgagtaagagtgtgatgtctctctc 233  Q
    |||||| |||||| ||||||||||||||||  |||||||||||| ||||  ||||||||||| ||||||||||    
T  1802 gaacaccttataagtgagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctctctc 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 235
Target Start/End: Original strand, 39827 - 39959
Alignment:
Q  103 gaattgttgtgtgcaagtatgagttatatgtcctatattggatagaaaatgagaggttgaacactttataaatgagaggacccataaaatcattgcctta 202  Q
    |||||||||||| ||||| |||||||||||||| | || ||||||||||   | ||||| || |||||||| ||||| ||   ||||| | ||| |||||    
T  39827 gaattgttgtgttcaagtgtgagttatatgtcccacatcggatagaaaagtggtggttggactctttataagtgagatgagatataaacttattacctta 39926  T
Q  203 agattttgagtaagagtgtgatgtctctctcgc 235  Q
    | ||||||  ||| | |||| ||||||||||||    
T  39927 aaattttggttaaaaatgtggtgtctctctcgc 39959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University