View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3651_high_8 (Length: 416)

Name: NF3651_high_8
Description: NF3651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3651_high_8
NF3651_high_8
[»] chr6 (42 HSPs)
chr6 (19-232)||(1469465-1469678)
chr6 (336-402)||(8667666-8667732)
chr6 (231-333)||(28712350-28712451)
chr6 (231-333)||(17352678-17352778)
chr6 (337-400)||(3539784-3539848)
chr6 (105-223)||(28712142-28712259)
chr6 (255-333)||(4031062-4031140)
chr6 (337-402)||(5670638-5670704)
chr6 (337-402)||(9932166-9932232)
chr6 (231-333)||(19723902-19724003)
chr6 (106-231)||(4031251-4031376)
chr6 (61-233)||(17296418-17296591)
chr6 (231-278)||(1469336-1469383)
chr6 (106-209)||(13003058-13003161)
chr6 (337-400)||(16698646-16698709)
chr6 (243-333)||(16793268-16793358)
chr6 (64-231)||(24154373-24154541)
chr6 (337-400)||(26514789-26514853)
chr6 (255-333)||(16142851-16142924)
chr6 (106-190)||(16142319-16142404)
chr6 (345-402)||(32806133-32806190)
chr6 (67-231)||(242249-242412)
chr6 (255-326)||(16143157-16143223)
chr6 (108-231)||(34992124-34992246)
chr6 (345-390)||(14479848-14479893)
chr6 (345-402)||(21595898-21595955)
chr6 (103-190)||(14767093-14767181)
chr6 (93-160)||(11744312-11744379)
chr6 (253-333)||(24154187-24154268)
chr6 (231-333)||(16142524-16142620)
chr6 (255-333)||(10163282-10163361)
chr6 (106-231)||(10163467-10163592)
chr6 (345-393)||(24160624-24160672)
chr6 (93-129)||(32783873-32783909)
chr6 (290-333)||(13002864-13002907)
chr6 (105-180)||(17352546-17352621)
chr6 (144-190)||(18560553-18560599)
chr6 (142-188)||(18713521-18713567)
chr6 (141-231)||(23073129-23073219)
chr6 (360-402)||(25055942-25055984)
chr6 (336-393)||(6778299-6778356)
chr6 (234-333)||(11744519-11744620)
[»] chr2 (42 HSPs)
chr2 (106-231)||(20515761-20515886)
chr2 (235-333)||(17636686-17636783)
chr2 (235-333)||(17676544-17676641)
chr2 (231-333)||(21498144-21498245)
chr2 (106-231)||(21498315-21498440)
chr2 (235-332)||(17162024-17162119)
chr2 (337-402)||(29224449-29224515)
chr2 (337-402)||(29337748-29337814)
chr2 (337-400)||(36039624-36039687)
chr2 (259-333)||(2482023-2482097)
chr2 (235-333)||(32890375-32890472)
chr2 (345-402)||(8679165-8679222)
chr2 (256-333)||(15438066-15438143)
chr2 (337-402)||(42700336-42700401)
chr2 (106-226)||(15438259-15438380)
chr2 (98-231)||(17162215-17162348)
chr2 (137-200)||(23388926-23388989)
chr2 (253-330)||(31404114-31404192)
chr2 (345-402)||(31759013-31759070)
chr2 (156-225)||(25473263-25473334)
chr2 (345-393)||(28006828-28006876)
chr2 (345-393)||(43992256-43992304)
chr2 (345-400)||(13229712-13229767)
chr2 (332-386)||(27258135-27258189)
chr2 (336-402)||(36556923-36556989)
chr2 (346-402)||(14701379-14701435)
chr2 (142-190)||(24543679-24543727)
chr2 (346-402)||(28457248-28457304)
chr2 (236-330)||(29891333-29891427)
chr2 (231-325)||(30999932-31000024)
chr2 (105-190)||(25520681-25520767)
chr2 (161-231)||(31000114-31000184)
chr2 (357-402)||(9783654-9783699)
chr2 (160-225)||(19011879-19011944)
chr2 (255-333)||(28760682-28760762)
chr2 (142-231)||(29891523-29891612)
chr2 (357-393)||(23924414-23924450)
chr2 (345-393)||(24662497-24662545)
chr2 (113-200)||(16467547-16467634)
chr2 (93-128)||(32890159-32890194)
chr2 (146-231)||(13370181-13370266)
chr2 (161-190)||(36772230-36772259)
[»] chr4 (32 HSPs)
chr4 (231-333)||(24924847-24924948)
chr4 (337-402)||(5272925-5272990)
chr4 (337-402)||(22048416-22048481)
chr4 (337-402)||(4838498-4838563)
chr4 (109-222)||(26654333-26654446)
chr4 (339-402)||(44428753-44428817)
chr4 (337-402)||(19730882-19730947)
chr4 (345-402)||(33239651-33239708)
chr4 (337-402)||(324173-324239)
chr4 (236-330)||(4697451-4697544)
chr4 (255-333)||(12568131-12568209)
chr4 (41-231)||(16288435-16288624)
chr4 (345-402)||(21668274-21668331)
chr4 (345-402)||(21677038-21677095)
chr4 (345-402)||(35416066-35416123)
chr4 (336-402)||(55327506-55327572)
chr4 (156-225)||(6244147-6244216)
chr4 (272-333)||(26654154-26654215)
chr4 (337-402)||(40994909-40994974)
chr4 (345-393)||(26373001-26373049)
chr4 (345-393)||(52619246-52619294)
chr4 (236-330)||(16675083-16675177)
chr4 (160-223)||(41635611-41635674)
chr4 (142-231)||(9354680-9354769)
chr4 (110-215)||(12567896-12568001)
chr4 (283-330)||(16288771-16288818)
chr4 (144-190)||(10070374-10070420)
chr4 (156-221)||(24332738-24332804)
chr4 (360-402)||(26070462-26070504)
chr4 (360-393)||(1188708-1188741)
chr4 (142-190)||(4732424-4732472)
chr4 (137-189)||(24924654-24924706)
[»] chr7 (42 HSPs)
chr7 (106-222)||(4979056-4979172)
chr7 (231-333)||(1545652-1545752)
chr7 (331-402)||(8107244-8107315)
chr7 (231-324)||(7948051-7948142)
chr7 (337-402)||(10345668-10345733)
chr7 (339-402)||(23795828-23795891)
chr7 (231-326)||(25621137-25621231)
chr7 (337-402)||(6173250-6173315)
chr7 (336-402)||(22321161-22321228)
chr7 (336-402)||(31157636-31157703)
chr7 (337-402)||(2632131-2632196)
chr7 (336-402)||(19471595-19471661)
chr7 (105-231)||(28036930-28037056)
chr7 (231-333)||(4978857-4978958)
chr7 (142-331)||(18046267-18046461)
chr7 (231-323)||(12468903-12468992)
chr7 (337-398)||(22825347-22825408)
chr7 (255-323)||(28037163-28037231)
chr7 (235-333)||(7524770-7524866)
chr7 (236-333)||(9022568-9022664)
chr7 (106-231)||(25621316-25621441)
chr7 (104-231)||(11994144-11994270)
chr7 (345-402)||(2478395-2478452)
chr7 (345-402)||(12089829-12089886)
chr7 (345-402)||(31879333-31879390)
chr7 (236-333)||(41131907-41132003)
chr7 (270-320)||(15682858-15682908)
chr7 (281-330)||(5531768-5531817)
chr7 (142-231)||(41131726-41131815)
chr7 (357-393)||(2796945-2796981)
chr7 (345-393)||(31663882-31663930)
chr7 (137-231)||(12468718-12468813)
chr7 (236-323)||(18084281-18084367)
chr7 (345-402)||(12184594-12184652)
chr7 (164-231)||(4587739-4587806)
chr7 (236-326)||(10649305-10649394)
chr7 (98-183)||(7948252-7948337)
chr7 (336-392)||(12191586-12191643)
chr7 (347-387)||(3544250-3544290)
chr7 (361-393)||(4704776-4704808)
chr7 (93-129)||(14987415-14987451)
chr7 (93-129)||(15417026-15417062)
[»] scaffold0298 (2 HSPs)
scaffold0298 (336-402)||(11565-11631)
scaffold0298 (336-402)||(15335-15401)
[»] chr8 (51 HSPs)
chr8 (336-402)||(9067528-9067594)
chr8 (336-402)||(11308348-11308414)
chr8 (337-402)||(8742645-8742710)
chr8 (337-402)||(41576693-41576758)
chr8 (337-402)||(3299536-3299601)
chr8 (337-402)||(27348761-27348826)
chr8 (233-333)||(23355430-23355529)
chr8 (255-333)||(22450051-22450129)
chr8 (231-333)||(41652031-41652132)
chr8 (337-400)||(16583113-16583177)
chr8 (259-333)||(19709520-19709594)
chr8 (337-402)||(22181311-22181376)
chr8 (231-333)||(28291590-28291690)
chr8 (336-398)||(28370832-28370895)
chr8 (345-402)||(28925512-28925570)
chr8 (337-402)||(34006135-34006200)
chr8 (106-226)||(19709704-19709824)
chr8 (255-324)||(5892595-5892664)
chr8 (105-231)||(22450276-22450402)
chr8 (247-301)||(22455158-22455212)
chr8 (233-333)||(15340941-15341040)
chr8 (233-333)||(15430006-15430105)
chr8 (233-333)||(15521310-15521409)
chr8 (106-222)||(18847193-18847309)
chr8 (98-189)||(27123898-27123990)
chr8 (234-333)||(32352162-32352259)
chr8 (234-333)||(32368823-32368920)
chr8 (255-322)||(10600223-10600290)
chr8 (156-231)||(11647528-11647603)
chr8 (105-223)||(33053637-33053756)
chr8 (236-330)||(27123662-27123755)
chr8 (357-402)||(16959286-16959331)
chr8 (265-333)||(11030666-11030734)
chr8 (103-190)||(12669077-12669165)
chr8 (105-229)||(24681005-24681132)
chr8 (335-402)||(13848687-13848754)
chr8 (256-311)||(24680834-24680889)
chr8 (270-333)||(6017555-6017620)
chr8 (243-288)||(13110196-13110241)
chr8 (154-231)||(32351991-32352068)
chr8 (154-231)||(32368652-32368729)
chr8 (98-129)||(32351946-32351977)
chr8 (98-129)||(32368607-32368638)
chr8 (142-200)||(10600433-10600491)
chr8 (146-200)||(22713898-22713952)
chr8 (144-190)||(23242097-23242143)
chr8 (142-184)||(23355291-23355333)
chr8 (106-184)||(41652259-41652336)
chr8 (150-231)||(22455321-22455402)
chr8 (92-129)||(23540565-23540602)
chr8 (156-196)||(30913256-30913296)
[»] chr5 (46 HSPs)
chr5 (231-333)||(24309027-24309128)
chr5 (231-333)||(24364198-24364299)
chr5 (337-402)||(9405159-9405224)
chr5 (337-402)||(11722638-11722703)
chr5 (337-402)||(30606438-30606503)
chr5 (29-200)||(24364415-24364585)
chr5 (337-400)||(33435339-33435402)
chr5 (339-402)||(34457030-34457093)
chr5 (336-402)||(14345195-14345261)
chr5 (337-402)||(7315939-7316004)
chr5 (337-402)||(16903971-16904036)
chr5 (337-398)||(24836461-24836522)
chr5 (337-398)||(31846685-31846746)
chr5 (98-225)||(10235806-10235933)
chr5 (336-402)||(11767489-11767556)
chr5 (235-333)||(24663532-24663629)
chr5 (231-328)||(30985574-30985669)
chr5 (255-335)||(22987727-22987807)
chr5 (37-187)||(24308748-24308897)
chr5 (113-231)||(28619459-28619577)
chr5 (231-333)||(31533060-31533156)
chr5 (246-318)||(22848007-22848079)
chr5 (235-311)||(21390639-21390714)
chr5 (144-231)||(22987533-22987620)
chr5 (231-324)||(10236029-10236120)
chr5 (236-333)||(25667298-25667394)
chr5 (345-402)||(27166468-27166525)
chr5 (160-230)||(21166395-21166465)
chr5 (142-190)||(23355461-23355509)
chr5 (337-393)||(42801049-42801105)
chr5 (336-391)||(6270636-6270691)
chr5 (29-128)||(21381750-21381849)
chr5 (147-190)||(22847832-22847875)
chr5 (142-207)||(24663364-24663429)
chr5 (89-129)||(20058969-20059009)
chr5 (236-288)||(24878353-24878404)
chr5 (345-393)||(34869114-34869162)
chr5 (137-231)||(9422903-9422996)
chr5 (146-200)||(24878171-24878225)
chr5 (142-231)||(25667489-25667579)
chr5 (137-190)||(22010872-22010925)
chr5 (92-129)||(26128856-26128893)
chr5 (142-190)||(17167566-17167614)
chr5 (146-190)||(19924268-19924312)
chr5 (246-333)||(36499575-36499663)
chr5 (160-223)||(39838751-39838815)
[»] chr3 (55 HSPs)
chr3 (336-402)||(9990130-9990196)
chr3 (337-400)||(52307447-52307510)
chr3 (337-402)||(7652584-7652649)
chr3 (336-402)||(10385430-10385497)
chr3 (255-330)||(27717993-27718068)
chr3 (337-402)||(8626358-8626424)
chr3 (251-333)||(17439141-17439223)
chr3 (337-402)||(23383039-23383105)
chr3 (108-217)||(7536349-7536457)
chr3 (255-333)||(15987566-15987644)
chr3 (231-320)||(25321133-25321220)
chr3 (106-231)||(25466242-25466367)
chr3 (100-231)||(4022947-4023078)
chr3 (247-322)||(53589149-53589224)
chr3 (336-402)||(22098715-22098781)
chr3 (337-402)||(23397030-23397096)
chr3 (106-231)||(48895805-48895930)
chr3 (337-393)||(20962620-20962676)
chr3 (337-401)||(27849913-27849977)
chr3 (233-315)||(1745066-1745146)
chr3 (106-231)||(14132304-14132430)
chr3 (345-402)||(37023425-37023482)
chr3 (337-393)||(11257847-11257903)
chr3 (104-231)||(44451093-44451219)
chr3 (255-333)||(7536146-7536224)
chr3 (235-333)||(14132137-14132234)
chr3 (160-225)||(1085532-1085597)
chr3 (345-402)||(36468806-36468863)
chr3 (255-324)||(45279949-45280017)
chr3 (137-225)||(1744879-1744967)
chr3 (108-231)||(53589330-53589454)
chr3 (142-225)||(15987375-15987458)
chr3 (255-333)||(12144997-12145079)
chr3 (142-231)||(45280169-45280258)
chr3 (345-402)||(48167561-48167618)
chr3 (345-393)||(2357903-2357951)
chr3 (146-190)||(8737457-8737501)
chr3 (146-190)||(9089695-9089739)
chr3 (105-225)||(12144761-12144881)
chr3 (137-200)||(25320987-25321050)
chr3 (232-290)||(9101731-9101788)
chr3 (336-402)||(33248724-33248790)
chr3 (265-318)||(4022757-4022810)
chr3 (105-189)||(4026633-4026717)
chr3 (269-333)||(15759600-15759664)
chr3 (256-324)||(17132702-17132769)
chr3 (25-60)||(19954621-19954656)
chr3 (98-129)||(29614930-29614961)
chr3 (234-333)||(48896019-48896117)
chr3 (360-402)||(4742387-4742429)
chr3 (149-231)||(17439361-17439443)
chr3 (142-190)||(4765963-4766011)
chr3 (106-174)||(9101920-9101988)
chr3 (147-187)||(26010709-26010749)
chr3 (156-184)||(39583974-39584002)
[»] chr1 (29 HSPs)
chr1 (336-402)||(9667057-9667123)
chr1 (337-402)||(39000543-39000608)
chr1 (337-402)||(431702-431768)
chr1 (336-402)||(12167577-12167643)
chr1 (336-402)||(33491559-33491625)
chr1 (337-402)||(38121294-38121359)
chr1 (100-231)||(24633965-24634096)
chr1 (106-209)||(25018415-25018516)
chr1 (231-313)||(44787392-44787473)
chr1 (337-398)||(49249802-49249864)
chr1 (248-333)||(24633332-24633417)
chr1 (108-225)||(33379565-33379682)
chr1 (231-324)||(33379384-33379476)
chr1 (337-402)||(16832145-16832210)
chr1 (345-402)||(40999474-40999531)
chr1 (106-231)||(44787556-44787681)
chr1 (93-190)||(22608135-22608233)
chr1 (142-190)||(33102844-33102892)
chr1 (345-391)||(11738168-11738214)
chr1 (231-333)||(25018624-25018725)
chr1 (345-393)||(16131245-16131293)
chr1 (132-231)||(16083448-16083547)
chr1 (161-231)||(4521812-4521882)
chr1 (146-200)||(17615074-17615128)
chr1 (345-402)||(13217418-13217475)
chr1 (348-393)||(20225735-20225780)
chr1 (106-200)||(11821583-11821673)
chr1 (288-333)||(23455188-23455233)
chr1 (98-130)||(25969112-25969144)
[»] scaffold0159 (1 HSPs)
scaffold0159 (337-402)||(28261-28326)
[»] scaffold0015 (1 HSPs)
scaffold0015 (337-402)||(175336-175401)
[»] scaffold0167 (2 HSPs)
scaffold0167 (116-220)||(731-835)
scaffold0167 (255-333)||(10314-10392)
[»] scaffold0124 (1 HSPs)
scaffold0124 (336-402)||(12929-12996)
[»] scaffold0002 (2 HSPs)
scaffold0002 (335-402)||(349966-350033)
scaffold0002 (142-192)||(376450-376500)
[»] scaffold0336 (1 HSPs)
scaffold0336 (337-402)||(9477-9543)
[»] scaffold0076 (1 HSPs)
scaffold0076 (337-402)||(25011-25077)
[»] scaffold0019 (2 HSPs)
scaffold0019 (337-402)||(168770-168835)
scaffold0019 (360-402)||(115953-115995)
[»] scaffold0444 (1 HSPs)
scaffold0444 (339-402)||(11850-11914)
[»] scaffold0320 (1 HSPs)
scaffold0320 (255-333)||(6392-6470)
[»] scaffold0147 (1 HSPs)
scaffold0147 (337-399)||(7469-7530)
[»] scaffold0039 (4 HSPs)
scaffold0039 (234-333)||(33280-33373)
scaffold0039 (255-333)||(48248-48321)
scaffold0039 (29-129)||(46432-46533)
scaffold0039 (255-316)||(51677-51733)
[»] scaffold0024 (2 HSPs)
scaffold0024 (135-190)||(39170-39225)
scaffold0024 (246-333)||(38925-39007)
[»] scaffold0014 (2 HSPs)
scaffold0014 (345-400)||(75675-75730)
scaffold0014 (137-208)||(191961-192032)
[»] scaffold0040 (1 HSPs)
scaffold0040 (236-333)||(26940-27034)
[»] scaffold0003 (1 HSPs)
scaffold0003 (106-231)||(89532-89657)
[»] scaffold0148 (1 HSPs)
scaffold0148 (231-324)||(22986-23075)
[»] scaffold0337 (2 HSPs)
scaffold0337 (89-190)||(4304-4406)
scaffold0337 (98-175)||(16989-17066)
[»] scaffold0065 (1 HSPs)
scaffold0065 (88-190)||(15047-15150)
[»] scaffold0142 (1 HSPs)
scaffold0142 (98-190)||(20306-20399)
[»] scaffold1102 (1 HSPs)
scaffold1102 (142-190)||(1175-1223)


Alignment Details
Target: chr6 (Bit Score: 186; Significance: 1e-100; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 19 - 232
Target Start/End: Complemental strand, 1469678 - 1469465
Alignment:
Q  19 tttttcacacttagaaaataatttgaaaagttatggaagttacttttaaaaaattgcataaatagaatttcattgggcatgccaatttgtttaccggtgt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  1469678 tttttcacacttagaaaataatttgaaaagttatggaagttacttctaaaaaattgcataaatagagtttcattgggcatgtcaatttgtttaccggtgt 1469579  T
Q  119 ttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatg 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||    
T  1469578 ttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttagaacatattgtgaaatgtttttgtagaaaatgtatgaatg 1469479  T
Q  219 ttcatcaaattcag 232  Q
    |||||||| |||||    
T  1469478 ttcatcaagttcag 1469465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 8667732 - 8667666
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8667732 ctgatgaaagatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 8667666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 28712350 - 28712451
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    ||||||||| |||||||| || |||||||||||||||||||||||| || |||||||||||||| |||||| |||||||||||||||||||||| | |||    
T  28712350 agacttaaatgtttaaaa-cgcagaaacttaaagaaaaggtaaattacattgcattaatgtaaaggtggttcgacaaatcagattacatacattatatat 28712448  T
Q  331 gac 333  Q
    |||    
T  28712449 gac 28712451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 17352678 - 17352778
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    ||||||| |||||||||  || ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  |||| |||||    
T  17352678 agacttagaagtttaaa--cgcagaaatttaaagaaaaggtaaattgcattgcattaatgtaaatgtggttcgacaaatcagattacaagcattatgtat 17352775  T
Q  331 gac 333  Q
    |||    
T  17352776 gac 17352778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 337 - 400
Target Start/End: Complemental strand, 3539848 - 3539784
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccaca 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3539848 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccaca 3539784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 223
Target Start/End: Original strand, 28712142 - 28712259
Alignment:
Q  105 ttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtag 204  Q
    |||||||||||||||||||||||||  | || |||| ||||||||||||| ||| |||||||| ||||||| |||||||||||||| ||| |||||  |     
T  28712142 ttgtttaccggtgtttttggtaaacaacgagactag-tttgattattacaggcaagatcaaaccagaaatcctaggacatgttgtgcaatctttttccat 28712240  T
Q  205 aaaatgtatgaatgttcat 223  Q
    ||| |||||||||||||||    
T  28712241 aaagtgtatgaatgttcat 28712259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 4031140 - 4031062
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||  ||||| | |||||| |||||||||||||||    
T  4031140 aaacttaaagaaaaggtaaattgcattgcattaatgtaaaggtggttcaacaaacctgattacttacattctgtatgac 4031062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 5670638 - 5670704
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  5670638 tgatgtaggatttttacctctcataaaactatttacacgtgagtatatataggatcgtgtccacagg 5670704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 9932166 - 9932232
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  9932166 tgatgaaagatttttacctctcataaaactctttacacgtaagtatatataggatcgtgtccacagg 9932232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 19724003 - 19723902
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    |||||||||||||||||| || | ||| |||||||||| |||||||||| |||||||||||||| || |||   |||||||||||||||||||| |||||    
T  19724003 agacttaaaagtttaaaa-cgcataaatttaaagaaaaagtaaattgcattgcattaatgtaaaggtagttcatcaaatcagattacatacattatgtat 19723905  T
Q  331 gac 333  Q
    |||    
T  19723904 gac 19723902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 4031376 - 4031251
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtaga 205  Q
    ||||||||||||||||||||||||   |||  ||  |||||||| ||||||||||||||||| ||||||| ||| |||||||||| ||| ||||| ||||    
T  4031376 tgtttaccggtgtttttggtaaacaagaagaataattttgattactacaagcatgatcaaaccagaaatcctagaacatgttgtgcaatctttttctaga 4031277  T
Q  206 aaatgtatgaatgttcatcaaattca 231  Q
    || ||   |||||||||||| |||||    
T  4031276 aagtgctcgaatgttcatcatattca 4031251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 233
Target Start/End: Complemental strand, 17296591 - 17296418
Alignment:
Q  61 cttttaaaaaattgcataaatagaatttcattgggcatgccaatttgtttaccggtgtttttggtaaacgccaa-gtctagctttgattattacaagcat 159  Q
    ||||| |||| ||||| ||||||  || |||||||||||||||||| |||| |||||||||||||||||   || |||||| |||| ||||||||| ||     
T  17296591 cttttcaaaatttgcacaaatagggttccattgggcatgccaatttatttatcggtgtttttggtaaacaagaaggtctagttttggttattacaatcag 17296492  T
Q  160 gatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattcaga 233  Q
    |||||||| ||||||| ||  |||||||||| ||  |||||  |||| |||  |||  ||||||||||||||||    
T  17296491 gatcaaacaagaaatcctacaacatgttgtgcaaattttttccagaatatgagtgagcgttcatcaaattcaga 17296418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 1469383 - 1469336
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgc 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1469383 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgc 1469336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 13003161 - 13003058
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtaga 205  Q
    |||||||||||| |||||||||||  || | |||| |||||||||||||||||  ||||||| |||||||||||||| ||||||| ||| |||||  |||    
T  13003161 tgtttaccggtgattttggtaaactacagggctagttttgattattacaagcagaatcaaaccagaaatcttaggacctgttgtgcaatcttttttcaga 13003062  T
Q  206 aaat 209  Q
    ||||    
T  13003061 aaat 13003058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 337 - 400
Target Start/End: Complemental strand, 16698709 - 16698646
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccaca 400  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||||||||| |||||||||    
T  16698709 tgatgaaggatttttccatctcataaaactatttacacgtgagtataataggattgtgtccaca 16698646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 243 - 333
Target Start/End: Original strand, 16793268 - 16793358
Alignment:
Q  243 ttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||| | |||||||||| |||||||||||||||| ||||||||  ||||  ||||| |||||||||||||||||||||  ||||||||    
T  16793268 ttaaaaatgcagaaacttaaggaaaaggtaaattgcattgcattaaaataaaaatggttcgacaaatcagattacatacatattgtatgac 16793358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 231
Target Start/End: Complemental strand, 24154541 - 24154373
Alignment:
Q  64 ttaaaaaattgcataaatagaatttcattgggcatgccaatttgtttaccggtgtttttggtaaacgccaagt-ctagctttgattattacaagcatgat 162  Q
    ||||||||||||| ||||||  | | |  |||| |||||||||||||| | || ||||||||||||  ||||  |||| ||||||||||||||| | |||    
T  24154541 ttaaaaaattgcacaaatagggtctaaccgggcgtgccaatttgtttaacagtttttttggtaaactacaagggctagttttgattattacaagtaggat 24154442  T
Q  163 caaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    ||||| | ||||| |||||| ||||||| ||| |||||  |||||||  |||| ||||||||| |||||    
T  24154441 caaaccataaatcctaggacttgttgtgcaatctttttccagaaaattcatgagtgttcatcatattca 24154373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 400
Target Start/End: Original strand, 26514789 - 26514853
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccaca 400  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  26514789 tgatgaaagatatttacctctcataaaactatttacacgtaagtatatataggatcttgtccaca 26514853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 16142851 - 16142924
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||||||||||||||||||||||||     |||||||||| |||||| |||||  ||||||||||||||||||||||||    
T  16142851 aaacttaaagaaaaggtaaattgca-----ttaatgtaaaggtggttcgacaatgcagattacatacattctgtatgac 16142924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 16142319 - 16142404
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagt-ctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    ||||||||||||||||||||||||   |||  || | |||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  16142319 tgtttaccggtgtttttggtaaacaataagggctggttttggttattacaaacatgatcaaactagaaatcctaggacatgttgtg 16142404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 32806133 - 32806190
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||||| ||||||||    
T  32806133 gatttttacatgtcataaaactatttacacgtaagtatgataggatcgtttccacagg 32806190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 231
Target Start/End: Complemental strand, 242412 - 242249
Alignment:
Q  67 aaaaattgcataaatagaatttcattgggcatgccaatttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaa 166  Q
    |||||||||| ||| ||| |  || ||||| ||| || ||||||||||| |||||||||||||  || |  |   |||| |||||||||||| |||||||    
T  242412 aaaaattgcacaaacagagtcacactgggcgtgcaaaattgtttaccggcgtttttggtaaacaacagggttgattttggttattacaagcaagatcaaa 242313  T
Q  167 ctagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    | |||| || |||||||||||||| |||||||||  ||||| ||  ||||||||||||| |||||    
T  242312 ccagaa-tcctaggacatgttgtgcaatatttttccagaaagtgcttgaatgttcatcatattca 242249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 16143157 - 16143223
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattct 326  Q
    |||||||||||||||||||||| ||     |||||||||| |||||| ||||||||||||||||||||||||    
T  16143157 aaacttaaagaaaaggtaaattaca-----ttaatgtaaaggtggttcgacaaatcagattacatacattct 16143223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 34992124 - 34992246
Alignment:
Q  108 tttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaa 207  Q
    |||| |||||||||||||||||  || | |||| ||| ||||||||||||| |||||||  ||||||| ||||| || ||||| |||||||||  | |||    
T  34992124 tttatcggtgtttttggtaaacaacatgactagttttaattattacaagcaggatcaaatcagaaatcctagga-atattgtgcaatatttttccataaa 34992222  T
Q  208 atgtatgaatgttcatcaaattca 231  Q
    ||  |||||||||||||| |||||    
T  34992223 atacatgaatgttcatcatattca 34992246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 14479893 - 14479848
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggat 390  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  14479893 gatttttacatctcataaaactatttacatgtaagtataataggat 14479848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 21595898 - 21595955
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| | |||||||||||||||||||| |||||||||||||||| ||| ||||    
T  21595898 gatttttacatgtcataaaactatttacacgtgagtataataggatcgtttccgcagg 21595955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 190
Target Start/End: Complemental strand, 14767181 - 14767093
Alignment:
Q  103 atttgtttaccggtgtttttggtaaacgccaagt-ctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    |||| ||| ||||||||||||||||||   |||  |||| ||||||||||||||||| |||||||| ||||||  ||||||||||||||    
T  14767181 atttattttccggtgtttttggtaaacaataagggctagttttgattattacaagcacgatcaaaccagaaattctaggacatgttgtg 14767093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 160
Target Start/End: Original strand, 11744312 - 11744379
Alignment:
Q  93 gggcatgccaatttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatg 160  Q
    |||||||||||||| ||||||||||||||||||||||  ||   |||| |||||||||||||| ||||    
T  11744312 gggcatgccaatttatttaccggtgtttttggtaaacaacatagctagttttgattattacaaacatg 11744379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 24154268 - 24154187
Alignment:
Q  253 agaaacttaaagaaaaggtaaattgcactgcatt--aatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||||| | ||||| ||| ||||||  |||||||| |||||| |||||||||| ||||||||||| ||||||||    
T  24154268 agaaacttaaagaaacg-taaatagcattgcatttaaatgtaaaggtggttcgacaaatcagtttacatacattttgtatgac 24154187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 16142524 - 16142620
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    |||||||||||||||||| |  | ||||||||||| || ||||||||||     |||||||||| |||||| |||||  ||||||||||||||||| |||    
T  16142524 agacttaaaagtttaaaa-cacataaacttaaagagaatgtaaattgca-----ttaatgtaaaggtggttcgacaatgcagattacatacattctatat 16142617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 10163361 - 10163282
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcatt--aatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||| | ||||||||| ||||||  |||||||| | |||| |||||||||| ||||||||||||| ||||||    
T  10163361 aaacttaaagaaatg-taaattgcattgcatttaaatgtaaacgcggttcgacaaatcagtttacatacattctatatgac 10163282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 10163592 - 10163467
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtaga 205  Q
    ||||||| | |||||||||||||    ||| |||| ||||||||||||||||| |||||||| ||||||  || || |||||||| ||| | |||  |||    
T  10163592 tgtttactgatgtttttggtaaaaaagaagactagttttgattattacaagcaggatcaaaccagaaattctaagatatgttgtgcaatctgtttccaga 10163493  T
Q  206 aaatgtatgaatgttcatcaaattca 231  Q
    ||||  |||| ||||||||| |||||    
T  10163492 aaattcatgagtgttcatcatattca 10163467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 24160624 - 24160672
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    ||||||||| | ||||||||||||| ||| |||||||||||||||||||    
T  24160624 gatttttacatgtcataaaactattaacatgtaagtataataggatcgt 24160672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 32783873 - 32783909
Alignment:
Q  93 gggcatgccaatttgtttaccggtgtttttggtaaac 129  Q
    ||||||||||||||||||||||||||||||| |||||    
T  32783873 gggcatgccaatttgtttaccggtgtttttgataaac 32783909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 333
Target Start/End: Complemental strand, 13002907 - 13002864
Alignment:
Q  290 gtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||| |||||| |||||||||| ||||||||||||||||||||    
T  13002907 gtaaaggtggttcgacaaatcagtttacatacattctgtatgac 13002864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 17352546 - 17352621
Alignment:
Q  105 ttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttagg 180  Q
    ||||||||| || ||||||||||||   | | |||| ||| |||||||||| ||||||||||||||||||| ||||    
T  17352546 ttgtttacctgtatttttggtaaacaataggactagttttaattattacaaacatgatcaaactagaaatcctagg 17352621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 190
Target Start/End: Complemental strand, 18560599 - 18560553
Alignment:
Q  144 tgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    ||||||||||||||| |||  |||||||||| |||||||||||||||    
T  18560599 tgattattacaagcaagatagaactagaaattttaggacatgttgtg 18560553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 18713521 - 18713567
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttg 188  Q
    ||||||||||||||||| |||||||| ||||||| | ||||||||||    
T  18713521 tttgattattacaagcaagatcaaaccagaaatccttggacatgttg 18713567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 23073219 - 23073129
Alignment:
Q  141 ctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    |||||||||||||||||| || || || | |||| |||| |||||||||| ||| |||||  | |||||||||  |||||||||| |||||    
T  23073219 ctttgattattacaagcaagaccagaccataaattttagaacatgttgtgcaatcttttttcaaaaaatgtatagatgttcatcatattca 23073129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 402
Target Start/End: Original strand, 25055942 - 25055984
Alignment:
Q  360 taaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||    
T  25055942 taaaactatttacacgtaagtataataagatcgtttccgcagg 25055984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 393
Target Start/End: Complemental strand, 6778356 - 6778299
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    |||||| | ||||||||| | ||||||||||||||||| || ||||||||| ||||||    
T  6778356 ctgatgtaagatttttacatgtcataaaactatttacatgtgagtataatatgatcgt 6778299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 333
Target Start/End: Original strand, 11744519 - 11744620
Alignment:
Q  234 cttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcatt--aatgtaaat---gtggttagacaaatcagattacatacattctgt 328  Q
    ||||||||||||||  |||||||||||||| | || |||||||||| ||||||  |||||||||   ||||||  ||||||||| ||| ||| |||||||    
T  11744519 cttaaaagtttaaa--cgtagaaacttaaa-acaatgtaaattgcattgcatttaaatgtaaattaggtggttcaacaaatcagtttatatagattctgt 11744615  T
Q  329 atgac 333  Q
    |||||    
T  11744616 atgac 11744620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 8e-34; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 20515886 - 20515761
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtaga 205  Q
    ||||||||||||||||||||||||   ||| |||| ||||||||||||||||| |||||||| |||||||||||||||||||||| ||| |||||  |||    
T  20515886 tgtttaccggtgtttttggtaaacaataagactagttttgattattacaagcaggatcaaaccagaaatcttaggacatgttgtgtaatctttttccaga 20515787  T
Q  206 aaatgtatgaatgttcatcaaattca 231  Q
    || ||||||||||||||||| |||||    
T  20515786 aagtgtatgaatgttcatcatattca 20515761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 17636686 - 17636783
Alignment:
Q  235 ttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||||||||||||| || ||||||||||||||||||||||||||  |||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  17636686 ttaaaagtttaaaa-cgcagaaacttaaagaaaaggtaaattgccttgcattaatgtaaaggtggttcgacaaatcagattacatacattttgtatgac 17636783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 17676544 - 17676641
Alignment:
Q  235 ttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||||||||||||| || | ||||||||||||||||||||||||  |||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  17676544 ttaaaagtttaaaa-cgcataaacttaaagaaaaggtaaattgccttgcattaatgtaaaggtggttcgacaaatcagattacatacattttgtatgac 17676641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 21498245 - 21498144
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    |||||||||||||||||| ||   ||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||| || |||||    
T  21498245 agacttaaaagtttaaaa-cgcgtaaacttaaagaaaaggtaaattgcattgcattaatgtaaaagtggttcgacaaatcagattacatacgttatgtat 21498147  T
Q  331 gac 333  Q
    |||    
T  21498146 gac 21498144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 21498440 - 21498315
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtaga 205  Q
    ||||||||||||||||||||||||    || |||||||||||||||||||||| | |||||||||||||| || || |||||||| ||| || || ||||    
T  21498440 tgtttaccggtgtttttggtaaacaagcagactagctttgattattacaagcacggtcaaactagaaatcctatgatatgttgtgcaatgttattctaga 21498341  T
Q  206 aaatgtatgaatgttcatcaaattca 231  Q
    || |||||||||||||| ||| ||||    
T  21498340 aagtgtatgaatgttcaccaagttca 21498315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 235 - 332
Target Start/End: Complemental strand, 17162119 - 17162024
Alignment:
Q  235 ttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatga 332  Q
    ||||||||||||| ||  | |||||||||| |||||||||||||| ||||||||| |||| |||| | ||||||||||||||||||||||||||||||    
T  17162119 ttaaaagtttaaacac--aaaaacttaaaggaaaggtaaattgcattgcattaatataaaggtggctcgacaaatcagattacatacattctgtatga 17162024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 29224515 - 29224449
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  29224515 tgatgaaggatttttacctctcataaaactatttacacgtgagtatatataggatcgtgtccacagg 29224449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 29337814 - 29337748
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  29337814 tgatgaaggatttttacctctcataaaactatttacacgtgagtatatataggatcgtgtccacagg 29337748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 337 - 400
Target Start/End: Original strand, 36039624 - 36039687
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccaca 400  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||    
T  36039624 tgatgaaggatttttccatctcataaaactatttacacgtaagtataataggatcgtgttcaca 36039687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 333
Target Start/End: Original strand, 2482023 - 2482097
Alignment:
Q  259 ttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||||||||||| ||||||||||||||  ||||| ||||||||| ||||||||||||| |||||||    
T  2482023 ttaaagaaaaggtaaattgcattgcattaatgtaaagatggttcgacaaatcaaattacatacattccgtatgac 2482097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 32890375 - 32890472
Alignment:
Q  235 ttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||||||||||||| || | ||||| ||||||||| |||||| || |||||||||||||| |||||| ||||||| |||||||||||||| ||||||||    
T  32890375 ttaaaagtttaaaa-cgcataaactaaaagaaaagataaatttcattgcattaatgtaaaagtggtttgacaaataagattacatacattatgtatgac 32890472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 8679165 - 8679222
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8679165 gatttttacatctcataaaactatttacacgtaagtataataggatcgtttccacagg 8679222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 333
Target Start/End: Complemental strand, 15438143 - 15438066
Alignment:
Q  256 aacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||| |||||||||||||| | |||||||||||  |||||| ||||||||| |||||||||||||||||||||    
T  15438143 aacttaaaggaaaggtaaattgcattacattaatgtaatggtggttcgacaaatcaaattacatacattctgtatgac 15438066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 42700336 - 42700401
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  42700336 tgatgtaggatttttacatctcataaaactatttacacgtaagtataataggatcgtttccgcagg 42700401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 15438380 - 15438259
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaa-tcttaggacatgttgtgaaatatttttgtag 204  Q
    ||||| || ||||||||| |||||   || ||||||||||||||| ||||||| ||| |||||||||| || || ||||||||||| ||| |||||  ||    
T  15438380 tgtttgccagtgtttttgataaactataattctagctttgattatcacaagcaggataaaactagaaaatcatatgacatgttgtgcaatcttttttcag 15438281  T
Q  205 aaaatgtatgaatgttcatcaa 226  Q
    |||||||||||||||| |||||    
T  15438280 aaaatgtatgaatgttaatcaa 15438259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 98 - 231
Target Start/End: Complemental strand, 17162348 - 17162215
Alignment:
Q  98 tgccaatttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatt 197  Q
    |||||||||||||||| |||||||||||||||   |    | | ||||||||||||||||| |||||||| ||||||| || ||||||||||| ||| ||    
T  17162348 tgccaatttgtttaccagtgtttttggtaaacaatagaattggttttgattattacaagcaggatcaaaccagaaatcctatgacatgttgtgcaatctt 17162249  T
Q  198 tttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    |||  | |||||  |||||||||||||| |||||    
T  17162248 tttccataaaatacatgaatgttcatcatattca 17162215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 23388926 - 23388989
Alignment:
Q  137 ctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatattttt 200  Q
    |||| |||||||||||||||||||||||||| ||||||| |||||||||||||| ||| |||||    
T  23388926 ctagttttgattattacaagcatgatcaaaccagaaatcctaggacatgttgtgcaatcttttt 23388989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 31404192 - 31404114
Alignment:
Q  253 agaaacttaaagaaaaggtaaattgcactgcattaatgt-aaatgtggttagacaaatcagattacatacattctgtat 330  Q
    ||||||||||||||||||||||||||| ||||||||  | ||| |||||| |||||||||  |||||||||||||||||    
T  31404192 agaaacttaaagaaaaggtaaattgcattgcattaaaataaaaggtggttcgacaaatcattttacatacattctgtat 31404114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 31759070 - 31759013
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  31759070 gatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 31759013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 25473263 - 25473334
Alignment:
Q  156 gcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgt--agaaaatgtatgaatgttcatca 225  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||| |  ||||||||| |||||||||||||    
T  25473263 gcatgatcaaactagaaatcctaggacatgttgtgcaatgttttttttcagaaaatgtttgaatgttcatca 25473334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 393
Target Start/End: Complemental strand, 28006876 - 28006828
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  28006876 gatttttacatgtcataaaactatttacacgtaagtataataggatcgt 28006828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 393
Target Start/End: Complemental strand, 43992304 - 43992256
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  43992304 gatttttacatgtcataaaactatttacacgtaagtataataggatcgt 43992256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 400
Target Start/End: Original strand, 13229712 - 13229767
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccaca 400  Q
    ||||||||| | |||||||||||||||||||||||||||||| |||||| ||||||    
T  13229712 gatttttacatgtcataaaactatttacacgtaagtataatatgatcgtttccaca 13229767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 27258189 - 27258135
Alignment:
Q  332 acacctgatgaaggatttttacctctcataaaactatttacacgtaagtataata 386  Q
    |||||||||| | ||||||||| | ||||||||||||||||||||||||||||||    
T  27258189 acacctgatgtaagatttttacatgtcataaaactatttacacgtaagtataata 27258135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 36556923 - 36556989
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||| | ||||||||| | |||||||||||||||||||||||||||||| |||||| ||| ||||    
T  36556923 ctgatgtaagatttttacatgtcataaaactatttacacgtaagtataatatgatcgtttccgcagg 36556989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 402
Target Start/End: Complemental strand, 14701435 - 14701379
Alignment:
Q  346 atttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||| | ||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  14701435 atttttacatgtcataaaactatttacacgtaagtataattggatcgtttccgcagg 14701379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 24543679 - 24543727
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    ||||||||||||||||||||||||||||||||| |||||| || |||||    
T  24543679 tttgattattacaagcatgatcaaactagaaattttaggatatattgtg 24543727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 402
Target Start/End: Original strand, 28457248 - 28457304
Alignment:
Q  346 atttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||| ||| ||||    
T  28457248 atttttacatgtcataaaactatttacacgtaagtataatatgatcgtttccgcagg 28457304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 330
Target Start/End: Complemental strand, 29891427 - 29891333
Alignment:
Q  236 taaaagtttaaaaacgtagaaacttaaagaaaagg-taaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    ||||||||||||| || | |||||||||||||| | ||||||||| ||||||||  ||||||||||| |||| |||||  |||||||||| |||||    
T  29891427 taaaagtttaaaa-cgcaaaaacttaaagaaaaagataaattgcattgcattaaaataaatgtggttcgacatatcagtgtacatacattttgtat 29891333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 325
Target Start/End: Complemental strand, 31000024 - 30999932
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattc 325  Q
    |||||||||||||||||  | ||  ||| |||||||||  ||||||||| |||| ||| ||||| || ||| |||||||||||||||||||||||    
T  31000024 agacttaaaagtttaaatgcata--aacataaagaaaatttaaattgcattgcactaaagtaaaagtagttcgacaaatcagattacatacattc 30999932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 25520767 - 25520681
Alignment:
Q  105 ttgtttaccggtgtttttggtaaacgccaagtctagcttt-gattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    |||||||||||||||||||||||||  ||||  ||| ||| | |||||||||||| ||||||||   ||||| ||||||||||||||    
T  25520767 ttgtttaccggtgtttttggtaaacaacaagggtaggttttggttattacaagcaggatcaaacccaaaatcctaggacatgttgtg 25520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 31000184 - 31000114
Alignment:
Q  161 atcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    ||||||||||||||| |||| ||||||||| | |||||||  ||||||||  ||||||||||||| |||||    
T  31000184 atcaaactagaaatcctagggcatgttgtgcagtatttttccagaaaatggttgaatgttcatcatattca 31000114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 402
Target Start/End: Original strand, 9783654 - 9783699
Alignment:
Q  357 tcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||||    
T  9783654 tcataaaactctttacacgtaagtataataggatcgtttccgcagg 9783699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 19011879 - 19011944
Alignment:
Q  160 gatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatca 225  Q
    ||||||| |||||||| |||||||| ||||| |||||||||  ||||| ||| |||||||||||||    
T  19011879 gatcaaattagaaatcctaggacatattgtgcaatatttttccagaaattgtttgaatgttcatca 19011944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 28760762 - 28760682
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcatt--aatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||||||||||||| ||||| ||   ||||||  |||||||| |||||| |||||||||| ||||||||||||| ||||||    
T  28760762 aaacttaaagaaaatgtaaaatgtgttgcatttaaatgtaaaggtggttcgacaaatcagtttacatacattctatatgac 28760682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 29891612 - 29891523
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    |||| |||||||||||| |||||||| | ||||| |||||||||||||||||  ||| |  |||||||   |||| ||||||||||||||    
T  29891612 tttggttattacaagcaggatcaaaccataaatcctaggacatgttgtgaaaagtttctccagaaaattagtgaacgttcatcaaattca 29891523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 393
Target Start/End: Original strand, 23924414 - 23924450
Alignment:
Q  357 tcataaaactatttacacgtaagtataataggatcgt 393  Q
    |||||||||||||||||||| ||||||||||||||||    
T  23924414 tcataaaactatttacacgtgagtataataggatcgt 23924450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 24662497 - 24662545
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    ||||||||| | ||||| |||||||||||||| ||||||||||||||||    
T  24662497 gatttttacatgtcatataactatttacacgtgagtataataggatcgt 24662545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 16467634 - 16467547
Alignment:
Q  113 cggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatattttt 200  Q
    ||||||||||| |||||   ||| ||||  || ||||||||||||  |||||||| ||||||| |||||||| ||||| |||||||||    
T  16467634 cggtgtttttgataaacaataagactagtgtttattattacaagcgagatcaaaccagaaatcataggacatattgtgcaatattttt 16467547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 128
Target Start/End: Original strand, 32890159 - 32890194
Alignment:
Q  93 gggcatgccaatttgtttaccggtgtttttggtaaa 128  Q
    |||| |||||||||||||||||||||||||||||||    
T  32890159 gggcgtgccaatttgtttaccggtgtttttggtaaa 32890194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 13370181 - 13370266
Alignment:
Q  146 attattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    ||||||||||||| |||||||  ||||||  ||| |||||||||| ||| |||||  | ||||| | ||||||||||||| |||||    
T  13370181 attattacaagcaggatcaaatcagaaattctagaacatgttgtgcaatctttttccaaaaaatatgtgaatgttcatcatattca 13370266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 190
Target Start/End: Complemental strand, 36772259 - 36772230
Alignment:
Q  161 atcaaactagaaatcttaggacatgttgtg 190  Q
    ||||||||||||||||||||||||||||||    
T  36772259 atcaaactagaaatcttaggacatgttgtg 36772230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 5e-32; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 24924847 - 24924948
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    |||||||||| ||||||| ||||||||||||||||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||||||| |||||    
T  24924847 agacttaaaattttaaaa-cgtagaaacttaaagaaaaggtatattgcattgcattaatgtaaaggtggttcgacaaatcagattacatacattatgtat 24924945  T
Q  331 gac 333  Q
    |||    
T  24924946 gac 24924948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 5272925 - 5272990
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5272925 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 5272990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 22048481 - 22048416
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22048481 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 22048416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 4838498 - 4838563
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4838498 tgatgaaagatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 4838563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 109 - 222
Target Start/End: Complemental strand, 26654446 - 26654333
Alignment:
Q  109 ttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaa 208  Q
    |||| ||||||||||||||||  | |||||||||||| |||||||||||||||||||||||||||||  | ||||||||||| ||  |||||  ||||||    
T  26654446 ttactggtgtttttggtaaactactagtctagctttgtttattacaagcatgatcaaactagaaatcccatgacatgttgtgcaaagtttttccagaaaa 26654347  T
Q  209 tgtatgaatgttca 222  Q
    ||||||||||||||    
T  26654346 tgtatgaatgttca 26654333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 44428753 - 44428817
Alignment:
Q  339 atgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44428753 atgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 44428817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 19730882 - 19730947
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||    
T  19730882 tgatgaaggatttttacctctcataaaacttttcacatgtaagtataataggatcgtgtccacagg 19730947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 33239708 - 33239651
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33239708 gatttttacctctcattaaactatttacacgtaagtataataggatcgtgtccacagg 33239651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 324239 - 324173
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||    
T  324239 tgatgaaggatttttacctctcataaaactatttacacatgagtatatataggatcgtgtccacagg 324173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 236 - 330
Target Start/End: Original strand, 4697451 - 4697544
Alignment:
Q  236 taaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    ||||||||||||| || | ||||||||||||||||||||||| | |||||||| ||||| |||||| ||| |||||||||||||||||| |||||    
T  4697451 taaaagtttaaaa-cgcataaacttaaagaaaaggtaaattgtattgcattaaagtaaaggtggttcgacgaatcagattacatacattttgtat 4697544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 12568131 - 12568209
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||| | | |||||||||||||||||| ||||||||    
T  12568131 aaacttaaagaaaaggtaaattgcattgcattaatgtaaaggtagtttggctaatcagattacatacattatgtatgac 12568209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 231
Target Start/End: Original strand, 16288435 - 16288624
Alignment:
Q  41 ttgaaaagttatggaagttacttttaaaaaattgcataaatagaatttcattgggcatgccaatttgtttaccggtgtttttggtaaacgccaagtctag 140  Q
    ||||||||||||||||||| |||  |||||||| || ||||||| |  ||  || | ||| |||||||||||  |||||||||||||||   ||| ||||    
T  16288435 ttgaaaagttatggaagtttcttcaaaaaaatt-cacaaatagagtcccaccggacgtgctaatttgtttacttgtgtttttggtaaactagaagactag 16288533  T
Q  141 ctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
     |||||||| ||||| ||  || |||| ||||| |||  ||||||||||| ||| |||||  ||||| ||||||| |||||||||||||||    
T  16288534 ttttgattaatacaaacaacattaaaccagaaaccttcagacatgttgtgcaatctttttccagaaagtgtatgattgttcatcaaattca 16288624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 21668274 - 21668331
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  21668274 gatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 21668331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 21677038 - 21677095
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  21677038 gatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 21677095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 35416066 - 35416123
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  35416066 gatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 35416123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 55327572 - 55327506
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||| | ||||||||| | |||||||||||||||||||||||||||||| |||||| ||| ||||    
T  55327572 ctgatgtaagatttttacatatcataaaactatttacacgtaagtataatatgatcgtttccgcagg 55327506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 6244216 - 6244147
Alignment:
Q  156 gcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatca 225  Q
    |||||||||||||||||||| || | ||||||||| ||| |||||  ||||||||| |||||||||||||    
T  6244216 gcatgatcaaactagaaatcctatgccatgttgtgcaatctttttccagaaaatgtttgaatgttcatca 6244147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 333
Target Start/End: Complemental strand, 26654215 - 26654154
Alignment:
Q  272 aaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||||||| |||||||||| ||| |||||| ||||||||| |||||||||||| ||||||||    
T  26654215 aaattgcattgcattaatgcaaaggtggttcgacaaatcatattacatacattatgtatgac 26654154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 40994909 - 40994974
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||| || |||||||| | |||||||||||||||||||||||||||||| |||||| || |||||    
T  40994909 tgatgtagtatttttacatgtcataaaactatttacacgtaagtataataagatcgtttctacagg 40994974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 26373001 - 26373049
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  26373001 gatttttacatttcataaaactatttacacgtaagtatgataggatcgt 26373049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 393
Target Start/End: Complemental strand, 52619294 - 52619246
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    ||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  52619294 gatttttacatgtcataaaactatttacacgtaagtataacaggatcgt 52619246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 330
Target Start/End: Original strand, 16675083 - 16675177
Alignment:
Q  236 taaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcatt-aatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    |||||||||||||  | |||||| |||||||||||||||||| | |||||| ||  |||| |||||| |||||||||  |||||||||||||||||    
T  16675083 taaaagtttaaaat-gcagaaacataaagaaaaggtaaattgtattgcatttaaaataaaagtggttcgacaaatcattttacatacattctgtat 16675177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 41635674 - 41635611
Alignment:
Q  160 gatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcat 223  Q
    |||| ||||||||||| |||| ||||||||| |||  |||| ||||||||||||||||||||||    
T  41635674 gatcgaactagaaatcctagggcatgttgtgcaatgattttctagaaaatgtatgaatgttcat 41635611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 9354769 - 9354680
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    |||| ||||||||  ||||||||||| ||||||  |||||||||||||| ||| |||||  |||||| |  |||| ||||||||||||||    
T  9354769 tttggttattacattcatgatcaaaccagaaattataggacatgttgtgcaatgtttttccagaaaaagagtgaacgttcatcaaattca 9354680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 12567896 - 12568001
Alignment:
Q  110 taccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaat 209  Q
    |||| |||||||||||||||| | |||||| ||||| |||||||||    |||||||||||||||   | ||||||||||  ||| |||||  |||||||    
T  12567896 taccagtgtttttggtaaacgacgagtctacctttgcttattacaaatgggatcaaactagaaataccaagacatgttgtacaatctttttccagaaaat 12567995  T
Q  210 gtatga 215  Q
    ||||||    
T  12567996 gtatga 12568001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 283 - 330
Target Start/End: Original strand, 16288771 - 16288818
Alignment:
Q  283 cattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    |||||||||||| ||||||  ||||||||||||||||||||| |||||    
T  16288771 cattaatgtaaaggtggttcaacaaatcagattacatacattttgtat 16288818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 10070374 - 10070420
Alignment:
Q  144 tgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    ||||||||||||||  || | ||||||||||||||||||||||||||    
T  10070374 tgattattacaagcgagaccgaactagaaatcttaggacatgttgtg 10070420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 24332804 - 24332738
Alignment:
Q  156 gcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaa-tgtatgaatgttc 221  Q
    |||| |||||||||||||| ||| ||||||||||| ||| ||||| ||||||| ||| |||||||||    
T  24332804 gcataatcaaactagaaattttatgacatgttgtgcaatgtttttttagaaaagtgtttgaatgttc 24332738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 402
Target Start/End: Complemental strand, 26070504 - 26070462
Alignment:
Q  360 taaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||    
T  26070504 taaaactatttacacgtgagtataataggatcgtttccgcagg 26070462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 360 - 393
Target Start/End: Complemental strand, 1188741 - 1188708
Alignment:
Q  360 taaaactatttacacgtaagtataataggatcgt 393  Q
    ||||||||||||||||| ||||||||||||||||    
T  1188741 taaaactatttacacgttagtataataggatcgt 1188708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 4732424 - 4732472
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    |||| ||||||||| || |||||||| ||||||| ||||||||||||||    
T  4732424 tttggttattacaaacaggatcaaaccagaaatcctaggacatgttgtg 4732472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 24924654 - 24924706
Alignment:
Q  137 ctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgt 189  Q
    |||| ||||||||||| |||||||||||||| ||||||  |||||||| ||||    
T  24924654 ctagttttgattattataagcatgatcaaaccagaaatactaggacatattgt 24924706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 8e-31; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 4979172 - 4979056
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtaga 205  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||| ||||| |||| || ||||||| | ||||||||||||| ||| ||||| ||||    
T  4979172 tgtttaccggtgtttttgttaaactacaagtctagctttgattattagaagcaggatcgaattagaaatttcaggacatgttgtgcaatctttttctaga 4979073  T
Q  206 aaatgtatgaatgttca 222  Q
    |||||||||||||||||    
T  4979072 aaatgtatgaatgttca 4979056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 1545752 - 1545652
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    |||||||||||||||||  || ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||| |||||    
T  1545752 agacttaaaagtttaaa--cgcagaaaattaaagaaaaggtaaattgcattgcattaatgtaaatgtggttcgacaaatcagattatatacattttgtat 1545655  T
Q  331 gac 333  Q
    |||    
T  1545654 gac 1545652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 331 - 402
Target Start/End: Original strand, 8107244 - 8107315
Alignment:
Q  331 gacacctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8107244 gacaactgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 8107315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 7948142 - 7948051
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacatt 324  Q
    |||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||    
T  7948142 agacttaaaagtttaaa--cgcagaaacttaaagaaaaggtaaattgcattgcattaatgtaaatatggtttgacaaatcagattacatacatt 7948051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 10345668 - 10345733
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10345668 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 10345733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 23795891 - 23795828
Alignment:
Q  339 atgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23795891 atgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 23795828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 231 - 326
Target Start/End: Complemental strand, 25621231 - 25621137
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattct 326  Q
    |||||||||||||||||| || ||||||||||||||||||||||||| | |||||||||||||| |||||| ||||||| ||||||||||||||||    
T  25621231 agacttaaaagtttaaaa-cgcagaaacttaaagaaaaggtaaattgtattgcattaatgtaaaggtggttcgacaaattagattacatacattct 25621137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 6173315 - 6173250
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6173315 tgatgaaggatttttacctctcataaaactatttacatgtaagtataataggatcgtgtccacagg 6173250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 22321161 - 22321228
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22321161 ctgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 22321228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 31157636 - 31157703
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31157636 ctgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 31157703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 2632196 - 2632131
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2632196 tgataaaggatttttacctctcataaaactatttacacgtgagtataataggatcgtgtccacagg 2632131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 19471595 - 19471661
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19471595 ctgatgaatgatttttccatctcataaaactatttacacgtaagtataataggatcgtgtccacagg 19471661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 28036930 - 28037056
Alignment:
Q  105 ttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtag 204  Q
    ||||||||  ||||||||| |||||  |||  |||| ||||||||||||||| | |||||||  ||||||||||||| |||||||| ||| ||||| |||    
T  28036930 ttgtttactagtgtttttgttaaacaacaaaactagttttgattattacaagtaggatcaaatcagaaatcttaggatatgttgtgcaatctttttttag 28037029  T
Q  205 aaaatgtatgaatgttcatcaaattca 231  Q
    ||| ||||||||||||||||| |||||    
T  28037030 aaagtgtatgaatgttcatcatattca 28037056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 4978958 - 4978857
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    |||||||||||||||||| || | |||||| |||||||||||||||||| ||||||||| || |  ||||| ||||||||||||||||| |||| |||||    
T  4978958 agacttaaaagtttaaaa-cgcataaacttgaagaaaaggtaaattgcattgcattaatatatagatggttcgacaaatcagattacatgcattatgtat 4978860  T
Q  331 gac 333  Q
    |||    
T  4978859 gac 4978857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 331
Target Start/End: Original strand, 18046267 - 18046461
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca-------gac 234  Q
    |||| |||||||||||| |||||||||||||||  |||||||||||||| ||  |||||  |||||| |  |||| |||||||||||  |       |||    
T  18046267 tttggttattacaagcaggatcaaactagaaatactaggacatgttgtgcaaagtttttccagaaaaagagtgaacgttcatcaaatgaaaataaaagac 18046366  T
Q  235 ttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatg 331  Q
    | || ||||||||| || | ||||||||||||||||||||||||| ||||||||  |||| |||||| ||||||||| |||||| ||||| ||||||    
T  18046367 t-aatagtttaaaa-cgcaaaaacttaaagaaaaggtaaattgcattgcattaaaataaaggtggttcgacaaatcatattacacacattatgtatg 18046461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 12468903 - 12468992
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacat 323  Q
    |||||||||| ||||||  || | ||||||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||||||||||||    
T  12468903 agacttaaaaatttaaa--cgcataaacttaaagaaaag-taaattgcattgcattaaagtaaatgtggttcgacaaatcagattacatacat 12468992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 22825408 - 22825347
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtcca 398  Q
    ||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||    
T  22825408 tgatgaaggatttttccatctcataaaactatttacacgtgagtataataggatcgtgtcca 22825347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 28037163 - 28037231
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacat 323  Q
    |||||| |||||||||||||||||| ||||||||||||||||| |||  ||||||||||||||||||||    
T  28037163 aaacttgaagaaaaggtaaattgcattgcattaatgtaaatgtagtttcacaaatcagattacatacat 28037231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 7524866 - 7524770
Alignment:
Q  235 ttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||||  | ||||||||||| |||| ||||||| || |||||||||||||| |||||| |||||||||||||||||| ||| ||||||||    
T  7524866 ttaaaagtttaaaat-gcagaaacttaaa-aaaatgtaaattacattgcattaatgtaaaggtggttcgacaaatcagattacataaattatgtatgac 7524770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 236 - 333
Target Start/End: Complemental strand, 9022664 - 9022568
Alignment:
Q  236 taaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||| ||||||   ||||||||||||||||||  | ||||||||  |||| |||||| || ||||||||||||||||||||||||||||    
T  9022664 taaaagtttaaaa-cgtagattgttaaagaaaaggtaaattttattgcattaaaataaaggtggttcgagaaatcagattacatacattctgtatgac 9022568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 25621441 - 25621316
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtaga 205  Q
    ||||||||||||||||||||||||   |||  ||||||||||||||||||| | |||||||||| ||||  || || |||||| | ||| ||||| ||||    
T  25621441 tgtttaccggtgtttttggtaaacaagaagattagctttgattattacaaggaggatcaaactataaattctatgatatgttgcgcaatgtttttctaga 25621342  T
Q  206 aaatgtatgaatgttcatcaaattca 231  Q
    || | |||||||||||| ||| ||||    
T  25621341 aagtatatgaatgttcaccaagttca 25621316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 104 - 231
Target Start/End: Complemental strand, 11994270 - 11994144
Alignment:
Q  104 tttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgta 203  Q
    |||||||| |||||||||||||||||  || | |||| ||| ||||||||||||| |||||||  ||||||| ||||| || ||||| |||||||||  |    
T  11994270 tttgtttatcggtgtttttggtaaacaacatgactagtttttattattacaagcaggatcaaatcagaaatcctagga-atattgtgcaatatttttcca 11994172  T
Q  204 gaaaatgtatgaatgttcatcaaattca 231  Q
     |||||  |||||||||||||| |||||    
T  11994171 taaaatacatgaatgttcatcatattca 11994144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 2478452 - 2478395
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  2478452 gatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 2478395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 12089829 - 12089886
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  12089829 gatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 12089886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 31879390 - 31879333
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  31879390 gatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 31879333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 236 - 333
Target Start/End: Original strand, 41131907 - 41132003
Alignment:
Q  236 taaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||| || |||||||||||||||| | |||||||   |||||||  | || |||||| |||||||||||||||||||||| ||||||||    
T  41131907 taaaagtttaaaa-cgcagaaacttaaagaaaaagcaaattgcctggcattaaaatgaaggtggttcgacaaatcagattacatacattttgtatgac 41132003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 15682858 - 15682908
Alignment:
Q  270 gtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacata 320  Q
    |||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  15682858 gtaaattgcattgcattaatgtaaaagtggttagacaaatcagattgcata 15682908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 5531817 - 5531768
Alignment:
Q  281 tgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| |||||    
T  5531817 tgcattaatgtaaaggtggttagacaaaccagattacatacattttgtat 5531768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 41131726 - 41131815
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    ||||||||||||||||| ||||||| |||||||  ||||| |||||||| ||  ||||| |||||| ||  |||| ||||||||||||||    
T  41131726 tttgattattacaagcacgatcaaattagaaattctaggatatgttgtgcaaagtttttctagaaagtgagtgaacgttcatcaaattca 41131815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 393
Target Start/End: Original strand, 2796945 - 2796981
Alignment:
Q  357 tcataaaactatttacacgtaagtataataggatcgt 393  Q
    |||||||||||||||||||||||||||||||||||||    
T  2796945 tcataaaactatttacacgtaagtataataggatcgt 2796981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 31663882 - 31663930
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||    
T  31663882 gatttttacatgtcataaaaccatttacacgtaagtataataggatcgt 31663930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 12468718 - 12468813
Alignment:
Q  137 ctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaat-atttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    |||| ||||||||||||||||||| |||| | ||||||| ||||||||||| || |||  |||||  | ||||| ||||||||||||||| |||||    
T  12468718 ctagttttgattattacaagcatggtcaatccagaaatcctaggacatgttatgcaatcttttttccataaaatatatgaatgttcatcatattca 12468813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 323
Target Start/End: Original strand, 18084281 - 18084367
Alignment:
Q  236 taaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacat 323  Q
    ||||||||||||| || ||||||||||||||||| ||||||||| | ||||||  |||| ||||||  ||||||||  ||||||||||    
T  18084281 taaaagtttaaaa-cgcagaaacttaaagaaaagataaattgcattacattaaaataaaggtggtttcacaaatcattttacatacat 18084367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 12184652 - 12184594
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||||  ||||||||    
T  12184652 gatttttacatctcataaaactatttacacgtgagtatatataggatcgaatccacagg 12184594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 4587739 - 4587806
Alignment:
Q  164 aaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    |||||||||||| ||| ||||||||||  || |||||  ||||||||| ||||||||||||| |||||    
T  4587739 aaactagaaatcgtagcacatgttgtgcgatcttttttcagaaaatgtttgaatgttcatcatattca 4587806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 236 - 326
Target Start/End: Complemental strand, 10649394 - 10649305
Alignment:
Q  236 taaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattct 326  Q
    ||||||||||||| |  ||||||||| || |||| ||||||||||| ||||||  |||| |||||| |  ||||||| |||||||||||||    
T  10649394 taaaagtttaaaa-cacagaaacttacaggaaagataaattgcactacattaaaataaaggtggtttggaaaatcagtttacatacattct 10649305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 183
Target Start/End: Complemental strand, 7948337 - 7948252
Alignment:
Q  98 tgccaatttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggaca 183  Q
    |||||||||||||| |||| ||||||||||||   | | ||||  ||||||||||||| || |||||||| | ||||| |||||||    
T  7948337 tgccaatttgtttagcggtatttttggtaaacaataggactagtcttgattattacaaacaggatcaaaccataaatcctaggaca 7948252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 392
Target Start/End: Complemental strand, 12191643 - 12191586
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcg 392  Q
    |||||| | |||||||||  ||||||||||||||||||||| |||||| |||||||||    
T  12191643 ctgatgtaagatttttacaactcataaaactatttacacgtgagtatatataggatcg 12191586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 387
Target Start/End: Original strand, 3544250 - 3544290
Alignment:
Q  347 tttttacctctcataaaactatttacacgtaagtataatag 387  Q
    ||||||| | ||||||||||||||||| |||||||||||||    
T  3544250 tttttacatgtcataaaactatttacaagtaagtataatag 3544290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 393
Target Start/End: Original strand, 4704776 - 4704808
Alignment:
Q  361 aaaactatttacacgtaagtataataggatcgt 393  Q
    ||||||||||||||||||||||||||| |||||    
T  4704776 aaaactatttacacgtaagtataatagaatcgt 4704808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 14987451 - 14987415
Alignment:
Q  93 gggcatgccaatttgtttaccggtgtttttggtaaac 129  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  14987451 gggcgtgccaatttatttaccggtgtttttggtaaac 14987415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 15417062 - 15417026
Alignment:
Q  93 gggcatgccaatttgtttaccggtgtttttggtaaac 129  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  15417062 gggcgtgccaatttatttaccggtgtttttggtaaac 15417026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 11565 - 11631
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11565 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 11631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 15335 - 15401
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15335 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 15401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 9067528 - 9067594
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9067528 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 9067594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 11308348 - 11308414
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11308348 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 11308414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 8742645 - 8742710
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8742645 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 8742710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 41576693 - 41576758
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41576693 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 41576758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 3299601 - 3299536
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3299601 tgatgaaggatttttacctctcataaaactatttacacataagtataataggatcgtgtccacagg 3299536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 27348826 - 27348761
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27348826 tgatgaaggatttttacctctcataaaactatttacacgtaagtataatagaatcgtgtccacagg 27348761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 233 - 333
Target Start/End: Original strand, 23355430 - 23355529
Alignment:
Q  233 acttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatga 332  Q
    ||||||||||| ||||||| | |||||||||||| | |||||||||| |||||||||||||| |||||| |||||||||||||||||||||| |||||||    
T  23355430 acttaaaagtt-aaaaacgcataaacttaaagaatacgtaaattgcattgcattaatgtaaaggtggttcgacaaatcagattacatacattttgtatga 23355528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 22450129 - 22450051
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||| ||||||||    
T  22450129 aaacttaaagaaatggtaaattgcattgcattaatgttaatgtggttcgacaaatcagattacatacattttgtatgac 22450051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 41652132 - 41652031
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    ||||||||||||||||||  | |||||||||||||||||||| ||| || | |||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  41652132 agacttaaaagtttaaaaggg-agaaacttaaagaaaaggtagattacattacattaatgtaaaggtggttcgacaaatcaaattacatacattctgtat 41652034  T
Q  331 gac 333  Q
    |||    
T  41652033 gac 41652031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 337 - 400
Target Start/End: Complemental strand, 16583177 - 16583113
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccaca 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16583177 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccaca 16583113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 333
Target Start/End: Complemental strand, 19709594 - 19709520
Alignment:
Q  259 ttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||| | ||||||    
T  19709594 ttaaagaaaaggtaaattgcattgcattaatgtaaatgtggttcgacaaatcaaattacatacattatctatgac 19709520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 22181376 - 22181311
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22181376 tgatgaaggatttttccatctcataaaactattcacacgtaagtataataggatcgtgtccacagg 22181311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 28291690 - 28291590
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    |||||||||||||||||  || | ||| ||||||||||| ||||||||| |||||||||||||| || ||| |||||||||||||||| ||||||| |||    
T  28291690 agacttaaaagtttaaa--cgcaaaaatttaaagaaaagctaaattgcattgcattaatgtaaaggttgttcgacaaatcagattacacacattctatat 28291593  T
Q  331 gac 333  Q
    |||    
T  28291592 gac 28291590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 28370895 - 28370832
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtcca 398  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  28370895 ctgatgaaggatttttacctctcataaaactatttacatgtaagtatatataggatcgtgtcca 28370832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 28925512 - 28925570
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28925512 gatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 28925570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 34006135 - 34006200
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  34006135 tgatgaaggttttttccatctcataaaactatttgcacgtaagtataataggatcgtgtccacagg 34006200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 106 - 226
Target Start/End: Complemental strand, 19709824 - 19709704
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtaga 205  Q
    ||||||||||||||||||||||||   ||| |||  |||||||||| |||||| |||||||| | ||||| |||||||||||||| ||| |||||  |||    
T  19709824 tgtttaccggtgtttttggtaaacaagaagcctaattttgattattgcaagcaggatcaaaccataaatcctaggacatgttgtgcaatcttttttcaga 19709725  T
Q  206 aaatgtatgaatgttcatcaa 226  Q
    || ||  ||||||||||||||    
T  19709724 aagtgcgtgaatgttcatcaa 19709704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 5892595 - 5892664
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacatt 324  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||   |||||||| ||||||||||||    
T  5892595 aaacttaaagaaaatgtaaattgcattgcattaatgtaaatgtggtacaacaaatcaaattacatacatt 5892664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 231
Target Start/End: Complemental strand, 22450402 - 22450276
Alignment:
Q  105 ttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtag 204  Q
    |||||||||||||||||||||||||   | | |||| ||||||||||||||||| |||||||| | ||||| |  |||||||| || ||| |||||  |     
T  22450402 ttgtttaccggtgtttttggtaaacaaaaggactagttttgattattacaagcaagatcaaaccataaatcctgtgacatgttatgcaatctttttccaa 22450303  T
Q  205 aaaatgtatgaatgttcatcaaattca 231  Q
    ||| ||||||||| ||||||| |||||    
T  22450302 aaattgtatgaatcttcatcatattca 22450276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 247 - 301
Target Start/End: Complemental strand, 22455212 - 22455158
Alignment:
Q  247 aaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggtt 301  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  22455212 aaacgcagaaacttaaagaaaaggtaaattgcattgcattaatgtaaaggtggtt 22455158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 333
Target Start/End: Complemental strand, 15341040 - 15340941
Alignment:
Q  233 acttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcatt--aatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    ||||||||||| ||||||  ||||||||| ||||| | ||||||||| ||||||  || ||||| |||||| |||||||||| |||||||||||||||||    
T  15341040 acttaaaagttcaaaaac--agaaacttatagaaatg-taaattgcattgcatttcaacgtaaaggtggtttgacaaatcagtttacatacattctgtat 15340944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 333
Target Start/End: Complemental strand, 15430105 - 15430006
Alignment:
Q  233 acttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcatt--aatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    ||||||||||| ||||||  ||||||||| ||||| | ||||||||| ||||||  || ||||| |||||| |||||||||| |||||||||||||||||    
T  15430105 acttaaaagttcaaaaac--agaaacttatagaaatg-taaattgcattgcatttcaacgtaaaggtggtttgacaaatcagtttacatacattctgtat 15430009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 333
Target Start/End: Complemental strand, 15521409 - 15521310
Alignment:
Q  233 acttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcatt--aatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    ||||||||||| ||||||  ||||||||| ||||| | ||||||||| ||||||  || ||||| |||||| |||||||||| |||||||||||||||||    
T  15521409 acttaaaagttcaaaaac--agaaacttatagaaatg-taaattgcattgcatttcaacgtaaaggtggtttgacaaatcagtttacatacattctgtat 15521313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 222
Target Start/End: Original strand, 18847193 - 18847309
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtaga 205  Q
    |||||||||||||||||||  |||   | | |||| ||||||||||||||| | |||||||||||||||| || ||||||||||| ||| |||||  | |    
T  18847193 tgtttaccggtgtttttggcgaacaagaggactagttttgattattacaagaaggatcaaactagaaatcctatgacatgttgtgcaatctttttccaaa 18847292  T
Q  206 aaatgtatgaatgttca 222  Q
    ||||  |||||||||||    
T  18847293 aaatacatgaatgttca 18847309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 189
Target Start/End: Complemental strand, 27123990 - 27123898
Alignment:
Q  98 tgccaatttgtttaccggtgtttttggtaaacgccaagtc-tagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgt 189  Q
    ||||||||||||||||||||||||||||||||   |||   | | |||| ||||||||||||||||||||  ||||||| |||||||||||||    
T  27123990 tgccaatttgtttaccggtgtttttggtaaacaagaagggatggttttggttattacaagcatgatcaaatcagaaatcctaggacatgttgt 27123898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 333
Target Start/End: Original strand, 32352162 - 32352259
Alignment:
Q  234 cttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||||  || | |||||| |||||||| | ||||| | | |||||||||||| |||||| ||||||||| |||||||||||| ||||||||    
T  32352162 cttaaaagtttaaa--cgcaaaaacttgaagaaaagttcaattgtattacattaatgtaaaagtggttcgacaaatcatattacatacattttgtatgac 32352259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 234 - 333
Target Start/End: Original strand, 32368823 - 32368920
Alignment:
Q  234 cttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||||  || | |||||| |||||||| | ||||| | | |||||||||||| |||||| ||||||||| |||||||||||| ||||||||    
T  32368823 cttaaaagtttaaa--cgcaaaaacttgaagaaaagttcaattgtattacattaatgtaaaagtggttcgacaaatcatattacatacattttgtatgac 32368920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 10600290 - 10600223
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacataca 322  Q
    |||||||||| |||||||||||||| |||||||| ||||| || | | ||||||||||||||||||||    
T  10600290 aaacttaaagtaaaggtaaattgcattgcattaaagtaaaggtagatcgacaaatcagattacataca 10600223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 11647603 - 11647528
Alignment:
Q  156 gcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    |||||||||||||||||||| ||||||||||| |  || |  ||| |||||||||||||||||||||||| |||||    
T  11647603 gcatgatcaaactagaaatcctaggacatgttctacaaaaaatttctagaaaatgtatgaatgttcatcatattca 11647528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 105 - 223
Target Start/End: Original strand, 33053637 - 33053756
Alignment:
Q  105 ttgtttaccggtgtttttggtaaacgccaagtctagctttga-ttattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgta 203  Q
    |||||||||||||||||||||||||   ||| |||| ||| | || ||||  ||| |||||||||||||||| |||| |||||| || |||  |||| ||    
T  33053637 ttgtttaccggtgtttttggtaaacaataagactagttttaaattgttacttgcaggatcaaactagaaatcctagggcatgttttgcaatgattttcta 33053736  T
Q  204 gaaaatgtatgaatgttcat 223  Q
    |||||| |||||||||||||    
T  33053737 gaaaatatatgaatgttcat 33053756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 236 - 330
Target Start/End: Complemental strand, 27123755 - 27123662
Alignment:
Q  236 taaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    ||||||||||||| || | |||||||||| || | ||||||||| ||||||||  |||| |||||| || ||||||||||||||||||| |||||    
T  27123755 taaaagtttaaaa-cgcataaacttaaaggaatgataaattgcattgcattaaaataaaggtggttcgataaatcagattacatacattatgtat 27123662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 357 - 402
Target Start/End: Complemental strand, 16959331 - 16959286
Alignment:
Q  357 tcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  16959331 tcataaaactatttacacgtaagtataataggatcgtttccgcagg 16959286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 333
Target Start/End: Original strand, 11030666 - 11030734
Alignment:
Q  265 aaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||| ||||||| |||||||| || || |||||| || ||||||||||||||||||||| ||||||    
T  11030666 aaaaggtcaattgcattgcattaaagttaaggtggttcgataaatcagattacatacattctatatgac 11030734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 103 - 190
Target Start/End: Complemental strand, 12669165 - 12669077
Alignment:
Q  103 atttgtttaccggtgtttttggtaaacgccaagt-ctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    |||||||||||||||||||||||||||   | |  || | ||||||||||||||||| |||||||| ||||||| ||| ||||||||||    
T  12669165 atttgtttaccggtgtttttggtaaacaatacgggctggttttgattattacaagcaggatcaaaccagaaatcatagaacatgttgtg 12669077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 24681132 - 24681005
Alignment:
Q  105 ttgtttaccggtgtttttggtaaacgccaagt-ctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgt- 202  Q
    |||||||||||||||||||| ||||   |||  || | |||||||||||||||||  ||||||| ||||||| || ||||||||||||| | ||||| |     
T  24681132 ttgtttaccggtgtttttggaaaacaagaagggctggttttgattattacaagcagaatcaaaccagaaatcctatgacatgttgtgaattttttttttc 24681033  T
Q  203 -agaaaatgtatgaatgttcatcaaatt 229  Q
     |||||| |  |||||||||||||||||    
T  24681032 cagaaaaagagtgaatgttcatcaaatt 24681005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 402
Target Start/End: Original strand, 13848687 - 13848754
Alignment:
Q  335 cctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||| | ||||||||| | ||||||||||||||||| || |||||||||||||||| ||| ||||    
T  13848687 cctgatgtaagatttttacatgtcataaaactatttacaagtgagtataataggatcgtttccgcagg 13848754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 311
Target Start/End: Complemental strand, 24680889 - 24680834
Alignment:
Q  256 aacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatca 311  Q
    ||||||||||||||||||||| || ||||||||  ||||||||||| |||||||||    
T  24680889 aacttaaagaaaaggtaaattacattgcattaaaataaatgtggttcgacaaatca 24680834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 333
Target Start/End: Original strand, 6017555 - 6017620
Alignment:
Q  270 gtaaattgcactgcatt--aatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||||||||| ||||||  ||||||||||| ||| |||||||||| ||||||||||| ||||||||    
T  6017555 gtaaattgcattgcatttaaatgtaaatgtagttcgacaaatcagtttacatacattatgtatgac 6017620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 13110196 - 13110241
Alignment:
Q  243 ttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaa 288  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||||    
T  13110196 ttaaaaacgcagaaacttaaagaaaagataaattgcattgcattaa 13110241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 32351991 - 32352068
Alignment:
Q  154 aagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    ||||| |||||||| ||||||| ||||||||||||||| || ||||| || |||||  |||||||||| ||| |||||    
T  32351991 aagcaggatcaaaccagaaatcctaggacatgttgtgacatctttttctataaaatacatgaatgttcgtcatattca 32352068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 32368652 - 32368729
Alignment:
Q  154 aagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    ||||| |||||||| ||||||| ||||||||||||||| || ||||| || |||||  |||||||||| ||| |||||    
T  32368652 aagcaggatcaaaccagaaatcctaggacatgttgtgacatctttttctataaaatacatgaatgttcgtcatattca 32368729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 129
Target Start/End: Original strand, 32351946 - 32351977
Alignment:
Q  98 tgccaatttgtttaccggtgtttttggtaaac 129  Q
    ||||||||||||||||||||||||||||||||    
T  32351946 tgccaatttgtttaccggtgtttttggtaaac 32351977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 129
Target Start/End: Original strand, 32368607 - 32368638
Alignment:
Q  98 tgccaatttgtttaccggtgtttttggtaaac 129  Q
    ||||||||||||||||||||||||||||||||    
T  32368607 tgccaatttgtttaccggtgtttttggtaaac 32368638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 200
Target Start/End: Complemental strand, 10600491 - 10600433
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatattttt 200  Q
    |||| |||||||||||||||||| |  ||||||| |||||||||||||| ||| |||||    
T  10600491 tttggttattacaagcatgatcatagcagaaatcgtaggacatgttgtgtaatgttttt 10600433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 22713952 - 22713898
Alignment:
Q  146 attattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatattttt 200  Q
    ||||||||||||| |||||||| ||||| | ||| |||||||||||||| |||||    
T  22713952 attattacaagcaggatcaaaccagaaaccctagaacatgttgtgaaatgttttt 22713898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 23242097 - 23242143
Alignment:
Q  144 tgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    ||||||||||||||| || | |||||||||||| |||||||||||||    
T  23242097 tgattattacaagcaagaccgaactagaaatctcaggacatgttgtg 23242143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 23355291 - 23355333
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacat 184  Q
    ||||||||||||||||| |||||||  ||||||||||||||||    
T  23355291 tttgattattacaagcaggatcaaatcagaaatcttaggacat 23355333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 41652336 - 41652259
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacat 184  Q
    |||| ||||||||||| | |||||  |||| |||| ||||||||||||||||| |||||||| ||||||| || |||||    
T  41652336 tgttcaccggtgttttcg-taaacaacaagactagttttgattattacaagcaggatcaaaccagaaatcatatgacat 41652259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 22455402 - 22455321
Alignment:
Q  150 ttacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    ||||||||| |||||||| ||||||| ||||| |||||||| ||| |||||  | ||| |  |||||||||||||| |||||    
T  22455402 ttacaagcaggatcaaaccagaaatcctaggatatgttgtgcaatctttttccaaaaagtacatgaatgttcatcatattca 22455321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 23540602 - 23540565
Alignment:
Q  92 tgggcatgccaatttgtttaccggtgtttttggtaaac 129  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  23540602 tgggcgtgccaatttgtttactggtgtttttggtaaac 23540565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 30913296 - 30913256
Alignment:
Q  156 gcatgatcaaactagaaatcttaggacatgttgtgaaatat 196  Q
    |||||||||||||||||||| ||| |||||||||| |||||    
T  30913296 gcatgatcaaactagaaatcctagaacatgttgtgcaatat 30913256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 24309027 - 24309128
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||| || ||||||||||| || ||| |||||||||||||||||| |||||||||    
T  24309027 agacttaaaagtttaaaa-cgtaaaaacttaaagaaaaggtaaattgcattgtattaatgtaaaggtagttcgacaaatcagattacatatattctgtat 24309125  T
Q  331 gac 333  Q
    |||    
T  24309126 gac 24309128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 24364299 - 24364198
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||| || ||||||||||| || ||| |||||||||||||||||| |||||||||    
T  24364299 agacttaaaagtttaaaa-cgtaaaaacttaaagaaaaggtaaattgcattgtattaatgtaaaggtagttcgacaaatcagattacatatattctgtat 24364201  T
Q  331 gac 333  Q
    |||    
T  24364200 gac 24364198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 9405224 - 9405159
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9405224 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 9405159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 11722638 - 11722703
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11722638 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 11722703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 30606438 - 30606503
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30606438 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 30606503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 29 - 200
Target Start/End: Complemental strand, 24364585 - 24364415
Alignment:
Q  29 ttagaaaataatttgaaaagttatggaagttacttttaaaaaattgcataaatagaatttcattgggcatgccaatttgtttaccggtgtttttggtaaa 128  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||| ||| ||  || || ||| | ||||||||||||||||||| |||||||||||    
T  24364585 ttagaaaataatttgaaaagttatggaagttac-ttccaaaaattgcacaaacagggttccactggacgtgccaatttgtttaccggtatttttggtaaa 24364487  T
Q  129 cgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatattttt 200  Q
    |   ||  |||| ||||||||||||||||| |||||||| || |||| ||| ||||||| || ||| |||||    
T  24364486 caagaaaactagttttgattattacaagcaggatcaaaccaggaatcctagaacatgttctgcaatcttttt 24364415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 337 - 400
Target Start/End: Complemental strand, 33435402 - 33435339
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccaca 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33435402 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccaca 33435339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 339 - 402
Target Start/End: Complemental strand, 34457093 - 34457030
Alignment:
Q  339 atgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34457093 atgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 34457030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 14345261 - 14345195
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14345261 ctgatgaagaatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 14345195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 7316004 - 7315939
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7316004 tgatgaaggatttttccctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 7315939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 16903971 - 16904036
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16903971 tgatgaaagatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 16904036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 24836522 - 24836461
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtcca 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24836522 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtcca 24836461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 31846746 - 31846685
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtcca 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31846746 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtcca 31846685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 98 - 225
Target Start/End: Original strand, 10235806 - 10235933
Alignment:
Q  98 tgccaatttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatt 197  Q
    |||||||||||||||  |||||||||||||||   ||| |||| |||||||||||||||||||||||||| ||||||  |||||||||||||| ||| ||    
T  10235806 tgccaatttgtttactagtgtttttggtaaacaataagactagttttgattattacaagcatgatcaaaccagaaattctaggacatgttgtgcaatctt 10235905  T
Q  198 tttgtagaaaatgtatgaatgttcatca 225  Q
    |||  | |||||  ||||||||||||||    
T  10235906 tttccaaaaaatacatgaatgttcatca 10235933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 11767556 - 11767489
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11767556 ctgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 11767489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 235 - 333
Target Start/End: Original strand, 24663532 - 24663629
Alignment:
Q  235 ttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||||||||||||| | | ||||||||||||||| |||||||||| |||||||||||||| ||||||  ||||||||||||||||||||| ||||||||    
T  24663532 ttaaaagtttaaaa-catggaaacttaaagaaaaagtaaattgcattgcattaatgtaaaggtggttcaacaaatcagattacatacattatgtatgac 24663629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 231 - 328
Target Start/End: Complemental strand, 30985669 - 30985574
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgt 328  Q
    |||||||||||||||||   |||||||||||||||||| |||||||||| ||||||||  ||||||||||| ||||||||||||||||||||| ||||    
T  30985669 agacttaaaagtttaaat--gtagaaacttaaagaaaatgtaaattgcattgcattaaaataaatgtggttcgacaaatcagattacatacatcctgt 30985574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 22987727 - 22987807
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgacac 335  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||| |||| ||||||||||||||||| ||||||||||    
T  22987727 aaacttaaagtaaaggtaaattgcattgcattaatgtaaaggtggttcgacatatcagattacatacattttgtatgacac 22987807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 187
Target Start/End: Original strand, 24308748 - 24308897
Alignment:
Q  37 taatttgaaaagttatggaagttacttttaaaaaattgcataaatagaatttcattgggcatgccaatttgtttaccggtgtttttggtaaacgccaagt 136  Q
    |||||||||||||||||||||||||||  ||||| ||||| ||| ||  || || ||| | ||||||||||||||||||| ||||||||||||   ||      
T  24308748 taatttgaaaagttatggaagttacttccaaaaa-ttgcacaaacagggttccactggacgtgccaatttgtttaccggtatttttggtaaacaagaaaa 24308846  T
Q  137 ctagctttgattattacaagcatgatcaaactagaaatcttaggacatgtt 187  Q
    |||| ||||||||||||||||| |||||||| || |||| ||| |||||||    
T  24308847 ctagttttgattattacaagcaggatcaaaccaggaatcctagaacatgtt 24308897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 28619577 - 28619459
Alignment:
Q  113 cggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgta 212  Q
    ||||||||||||| |||   ||| |||| ||| ||||||||||||| |||||||| ||||||| |||||||||||||| |||  ||||  |||||||||     
T  28619577 cggtgtttttggtgaacaagaagactagttttaattattacaagcaggatcaaaccagaaatcataggacatgttgtgcaatccttttccagaaaatgtg 28619478  T
Q  213 tgaatgttcatcaaattca 231  Q
    ||||||||||||| |||||    
T  28619477 tgaatgttcatcatattca 28619459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 333
Target Start/End: Complemental strand, 31533156 - 31533060
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    |||||||||||||||||| | || |||| ||||||||||||||||||||     |||||||||| |||||| |||||||||||||||||||||||| |||    
T  31533156 agacttaaaagtttaaaa-cataaaaacataaagaaaaggtaaattgca-----ttaatgtaaaggtggttcgacaaatcagattacatacattctctat 31533063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 22848007 - 22848079
Alignment:
Q  246 aaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattaca 318  Q
    |||||| ||||||||||||||||||||||||||| ||||||||| |||| ||| || ||||||||||||||||    
T  22848007 aaaacggagaaacttaaagaaaaggtaaattgcattgcattaatataaaggtgattcgacaaatcagattaca 22848079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 21390639 - 21390714
Alignment:
Q  235 ttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatca 311  Q
    ||||||||||||||  | ||||||||||||||||||||||| ||| |||||||||||||| |||||| |||||||||    
T  21390639 ttaaaagtttaaaat-gcagaaacttaaagaaaaggtaaatcgcattgcattaatgtaaaggtggttcgacaaatca 21390714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 22987533 - 22987620
Alignment:
Q  144 tgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    ||||||| ||||||| |||||||||||||||| || ||||||||||| ||| |||||  ||||| ||| ||||||||||||| |||||    
T  22987533 tgattataacaagcaggatcaaactagaaatcatatgacatgttgtgcaatctttttccagaaagtgtgtgaatgttcatcatattca 22987620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 10236029 - 10236120
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacatt 324  Q
    |||||||||||||||||  |  |||||||||||||||| |||||||||| ||||||||  |||| ||||||  ||||||| |||||||||||||    
T  10236029 agacttaaaagtttaaatgc--agaaacttaaagaaaatgtaaattgcattgcattaaaataaaagtggttcaacaaatccgattacatacatt 10236120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 236 - 333
Target Start/End: Complemental strand, 25667394 - 25667298
Alignment:
Q  236 taaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||| || | |||||||||||||||||||| |||| |||||||| ||| | |||||| |||||| || |||||| ||||| ||||||||    
T  25667394 taaaagtttaaaa-cgcataaacttaaagaaaaggtaaactgcattgcattaaagtataggtggttcgacaaaacaaattacacacattttgtatgac 25667298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 27166468 - 27166525
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  27166468 gatttttacatctcataaaactatttacacgtcagtataataggatcgtttccgcagg 27166525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 21166465 - 21166395
Alignment:
Q  160 gatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattc 230  Q
    |||||||||||||||  |||||||||||||| |||  ||||  ||||||||||||||||||||||| ||||    
T  21166465 gatcaaactagaaattctaggacatgttgtgcaatgattttccagaaaatgtatgaatgttcatcatattc 21166395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 23355461 - 23355509
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  23355461 tttggttattacaagaatgatcaaactagaaatcctaggacatgttgtg 23355509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 393
Target Start/End: Complemental strand, 42801105 - 42801049
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    ||||| ||||||||||| | |||||||||||||||||||| | ||||||||||||||    
T  42801105 tgatgtaggatttttacatgtcataaaactatttacacgtgactataataggatcgt 42801049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 391
Target Start/End: Complemental strand, 6270691 - 6270636
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatc 391  Q
    |||||| | ||||||||| | |||||||||||||||||||| ||||||||||||||    
T  6270691 ctgatgtaagatttttacatgtcataaaactatttacacgtgagtataataggatc 6270636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 21381750 - 21381849
Alignment:
Q  29 ttagaaaataatttgaaaagttatggaagttacttttaaaaaattgcataaatagaatttcattgggcatgccaatttgtttaccggtgtttttggtaaa 128  Q
    ||||||||| |||| ||||||||||||||||| ||| ||||  ||||| ||| ||  |   |  |||| |||||||||||||||||||||||||||||||    
T  21381750 ttagaaaattattttaaaagttatggaagttagtttaaaaattttgcaaaaacagggtcctaccgggcgtgccaatttgtttaccggtgtttttggtaaa 21381849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 22847832 - 22847875
Alignment:
Q  147 ttattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    ||||||||||||||||||||||||||||| |||||||| |||||    
T  22847832 ttattacaagcatgatcaaactagaaatcctaggacattttgtg 22847875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 24663364 - 24663429
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaa 207  Q
    |||| |||||||||||| |||||||| ||||||||||||||||| |||| ||  ||||| ||||||    
T  24663364 tttggttattacaagcacgatcaaacaagaaatcttaggacatgatgtgcaaagtttttctagaaa 24663429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 20059009 - 20058969
Alignment:
Q  89 cattgggcatgccaatttgtttaccggtgtttttggtaaac 129  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  20059009 cattgggcgtgccaatttgtttaccagtgtttttggtaaac 20058969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 24878353 - 24878404
Alignment:
Q  236 taaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaa 288  Q
    ||||||||||||| || ||||||||||||||||| ||||||||| ||||||||    
T  24878353 taaaagtttaaaa-cgcagaaacttaaagaaaagataaattgcattgcattaa 24878404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 34869114 - 34869162
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    ||||||||| | ||||||||||||||||| || ||||||||||||||||    
T  34869114 gatttttacatgtcataaaactatttacatgtgagtataataggatcgt 34869162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 231
Target Start/End: Original strand, 9422903 - 9422996
Alignment:
Q  137 ctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    |||| ||||||||||||||||| |||||||  ||||||| ||||| || ||||| ||| |||||  | |||||  |||||||||||||| |||||    
T  9422903 ctagttttgattattacaagcaggatcaaatcagaaatcctagga-atattgtgcaatctttttccataaaatacatgaatgttcatcatattca 9422996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 24878171 - 24878225
Alignment:
Q  146 attattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatattttt 200  Q
    ||||||||||||| |||||||  ||||||| |||||||||||||| ||| |||||    
T  24878171 attattacaagcaggatcaaagcagaaatcctaggacatgttgtgcaatgttttt 24878225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 25667579 - 25667489
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaat-atttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    |||| |||||||||||| |||||||||| |||||||||||  ||||||| |||  |||||  ||||||||  |||  ||||||||||||||    
T  25667579 tttggttattacaagcaggatcaaactaaaaatcttaggagctgttgtgcaatggttttttcagaaaatgagtgagagttcatcaaattca 25667489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 22010872 - 22010925
Alignment:
Q  137 ctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    |||| ||||||||||||||||  || | |||||||||||| |||||||||||||    
T  22010872 ctagttttgattattacaagcgagaccgaactagaaatctcaggacatgttgtg 22010925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 129
Target Start/End: Complemental strand, 26128893 - 26128856
Alignment:
Q  92 tgggcatgccaatttgtttaccggtgtttttggtaaac 129  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  26128893 tgggcgtgccaatttgtttatcggtgtttttggtaaac 26128856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 17167614 - 17167566
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    ||||||||||||||||| ||| |||| | ||||| ||||||||||||||    
T  17167614 tttgattattacaagcaggataaaaccataaatcctaggacatgttgtg 17167566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 19924312 - 19924268
Alignment:
Q  146 attattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    ||||||||||||| |||||| ||| ||||| ||||||||||||||    
T  19924312 attattacaagcaggatcaacctaaaaatcctaggacatgttgtg 19924268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 333
Target Start/End: Complemental strand, 36499663 - 36499575
Alignment:
Q  246 aaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgt-aaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||| |||||| || |||||||| ||||||| | ||||||||||| ||| |||||| || |||||||||| ||| |||| | ||||||    
T  36499663 aaaacatagaaatttgaagaaaagttaaattgtattgcattaatgtaaaaggtggttcgataaatcagattgcatccattatatatgac 36499575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 39838815 - 39838751
Alignment:
Q  160 gatcaaactagaaatcttaggacatgttgtg-aaatatttttgtagaaaatgtatgaatgttcat 223  Q
    ||||||| |||||||||| |||||||||||| |||   ||||  |||||||||||||||||||||    
T  39838815 gatcaaattagaaatctttggacatgttgtgcaaagtattttcaagaaaatgtatgaatgttcat 39838751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 9990196 - 9990130
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9990196 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 9990130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 337 - 400
Target Start/End: Original strand, 52307447 - 52307510
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccaca 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52307447 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccaca 52307510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 7652584 - 7652649
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7652584 tgataaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 7652649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 10385430 - 10385497
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10385430 ctgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 10385497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 27718068 - 27717993
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtat 330  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||| || |||||||||||||||||||||||||    
T  27718068 aaacttaaagaaaaggtaaattgcattgcattaatgtaaaggtggttcgataaatcagattacatacattctgtat 27717993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 8626424 - 8626358
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8626424 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 8626358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 17439223 - 17439141
Alignment:
Q  251 gtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||| ||| | ||||||    
T  17439223 gtagaaacttaaagaaaaggtaaattgcattgcattaatgtaaatgtagttcgacaaatcagattacatatattttatatgac 17439141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 23383105 - 23383039
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23383105 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 23383039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 7536457 - 7536349
Alignment:
Q  108 tttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaa 207  Q
    |||||||||| |||||||||||  |||||||||||||||||||||| || | |||||||||||||||| || |||||||| || ||| ||||| ||||||    
T  7536457 tttaccggtgattttggtaaactacaagtctagctttgattattacgagtaggatcaaactagaaatc-tatgacatgttctgcaatctttttctagaaa 7536359  T
Q  208 atgtatgaat 217  Q
    ||||||||||    
T  7536358 atgtatgaat 7536349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 15987566 - 15987644
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||||| |||||||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  15987566 aaactttaagaaaaggtattttgcattgcattaatgtaaatgtggttcgacaaatcagattacatacattttgtatgac 15987644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 231 - 320
Target Start/End: Original strand, 25321133 - 25321220
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacata 320  Q
    |||||||||||||||||  || |||||||||||||||| ||||||| || ||||||||||||||| ||||| ||||||||||||||||||    
T  25321133 agacttaaaagtttaaa--cgcagaaacttaaagaaaatgtaaattacattgcattaatgtaaatatggtttgacaaatcagattacata 25321220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 25466242 - 25466367
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtaga 205  Q
    |||||||||||||||||||||||    | | |||| ||||||||||||||||| |||||||||  ||||| ||||||||||| || ||| ||||  ||||    
T  25466242 tgtttaccggtgtttttggtaaataatatgactagttttgattattacaagcaggatcaaactgaaaatcctaggacatgttttgcaatcttttcctaga 25466341  T
Q  206 aaatgtatgaatgttcatcaaattca 231  Q
    |||| ||||||||||||||| |||||    
T  25466342 aaatatatgaatgttcatcatattca 25466367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 231
Target Start/End: Complemental strand, 4023078 - 4022947
Alignment:
Q  100 ccaatttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttt 199  Q
    ||||||||||||||||||||||||||||||     | |||  | ||||||||||||||| |||||||| |||| ||||| ||||||||||| ||| ||||    
T  4023078 ccaatttgtttaccggtgtttttggtaaacaatgggactatttatgattattacaagcaggatcaaaccagaattcttatgacatgttgtgcaatctttt 4022979  T
Q  200 tgtagaaaatgtatgaatgttcatcaaattca 231  Q
    | || |||||  |||||||||||||| |||||    
T  4022978 tctaaaaaatacatgaatgttcatcatattca 4022947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 247 - 322
Target Start/End: Complemental strand, 53589224 - 53589149
Alignment:
Q  247 aaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacataca 322  Q
    |||||||||||||||||||||||| |||||||| ||||||  |||||| |||||| ||||||||||||||||||||    
T  53589224 aaacgtagaaacttaaagaaaaggcaaattgcattgcatttgtgtaaaagtggttcgacaaatcagattacataca 53589149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 22098781 - 22098715
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||||    
T  22098781 ctgatgaaggatttttccatctcataaaactatttacatgtgagtataataggatcgtgtccacagg 22098715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 23397096 - 23397030
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||    
T  23397096 tgatgaaggatttttacctcttataaaactatttacacgtaagtatatataggatcgtatccacagg 23397030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 48895805 - 48895930
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtaga 205  Q
    ||||||||||||||||||||||||  || | |||  ||| ||||||||||||| ||||||||||||||| |||||||||| |||| ||| |||||  | |    
T  48895805 tgtttaccggtgtttttggtaaactacacggctaatttttattattacaagcaggatcaaactagaaattttaggacatgatgtgcaatctttttccaaa 48895904  T
Q  206 aaatgtatgaatgttcatcaaattca 231  Q
    |||||| ||| |||| |||| |||||    
T  48895905 aaatgtgtgagtgtttatcatattca 48895930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 337 - 393
Target Start/End: Original strand, 20962620 - 20962676
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20962620 tgatgtaggatttttacatctcataaaactatttacacgtaagtataataggatcgt 20962676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 337 - 401
Target Start/End: Original strand, 27849913 - 27849977
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacag 401  Q
    ||||||||||||||| | ||||||||||||||||||| || ||||||||||||||||||||||||    
T  27849913 tgatgaaggatttttccatctcataaaactatttacatgtgagtataataggatcgtgtccacag 27849977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 233 - 315
Target Start/End: Original strand, 1745066 - 1745146
Alignment:
Q  233 acttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagatt 315  Q
    |||||||||||||||  || |||||||| || ||||||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  1745066 acttaaaagtttaaa--cgcagaaacttgaacaaaaggtaaattgcattgcattaatgtaaaggtgattagacaaatcagatt 1745146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 14132430 - 14132304
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaa-gtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtag 204  Q
    ||||||||||||||||||||||||   || | || | |||| |||||||||||| ||||||||||||||||  ||||||||||||| ||| |||||  |     
T  14132430 tgtttaccggtgtttttggtaaacaagaaaggctggttttggttattacaagcaggatcaaactagaaatccaaggacatgttgtgcaatgtttttccaa 14132331  T
Q  205 aaaatgtatgaatgttcatcaaattca 231  Q
    ||| ||  |||||||||||||||||||    
T  14132330 aaagtgagtgaatgttcatcaaattca 14132304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 37023482 - 37023425
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||    
T  37023482 gatttttacatctcataaaactatttacacgtaagtataatatgatcgagtccacagg 37023425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 337 - 393
Target Start/End: Original strand, 11257847 - 11257903
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  11257847 tgatgtaggatttttacatctcataaaactatttacacataagtataataggatcgt 11257903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 104 - 231
Target Start/End: Complemental strand, 44451219 - 44451093
Alignment:
Q  104 tttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgta 203  Q
    |||||||| |||||||||||||||||  || | |||| ||||||||||||||||| |||||||  ||||||| ||||| || ||||| ||| |||||  |    
T  44451219 tttgtttatcggtgtttttggtaaacaacatgactagttttgattattacaagcaagatcaaatcagaaatcctagga-atattgtgcaatctttttcca 44451121  T
Q  204 gaaaatgtatgaatgttcatcaaattca 231  Q
     |||||  |||||||||||||| |||||    
T  44451120 taaaatacatgaatgttcatcatattca 44451093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 7536224 - 7536146
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||||||||| || ||||||||| | |||||||||||||| ||| || ||||||||| |||||||||||| ||||||||    
T  7536224 aaacttaaaggaagggtaaattgtattgcattaatgtaaaggtgattcgacaaatcaaattacatacattttgtatgac 7536146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 235 - 333
Target Start/End: Complemental strand, 14132234 - 14132137
Alignment:
Q  235 ttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||||||||||||| || | ||||||| ||||||||| ||||||| |||||||||||||   |||||  | ||||||||||||||||||| ||||||||    
T  14132234 ttaaaagtttaaaa-cgcataaacttacagaaaaggttaattgcattgcattaatgtaacgatggttcaataaatcagattacatacattttgtatgac 14132137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 1085532 - 1085597
Alignment:
Q  160 gatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatca 225  Q
    |||||||||||||||| |||||||||||||| |||  |||| |||||||| |||||||||||||||    
T  1085532 gatcaaactagaaatcctaggacatgttgtgcaatgattttctagaaaatatatgaatgttcatca 1085597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 36468806 - 36468863
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  36468806 gatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 36468863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 45280017 - 45279949
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacatt 324  Q
    ||||||||| ||||| ||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||    
T  45280017 aaacttaaataaaag-taaattgcattgcattaaagtagatgtggttcgacaaatcagattacatacatt 45279949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 1744879 - 1744967
Alignment:
Q  137 ctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatca 225  Q
    |||| ||||||||||||||  | ||| ||| |||||||||||||| |||||||| ||| |||||  | |||||||||||||||||||||    
T  1744879 ctagttttgattattacaaataggattaaattagaaatcttaggatatgttgtgcaatcttttttcaaaaaatgtatgaatgttcatca 1744967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 53589454 - 53589330
Alignment:
Q  108 tttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgt-agaa 206  Q
    ||||| |||||||||||||||    | | |||| ||||||||||||||| | |||||||| ||||||| |||||||| ||||| ||| ||||| | ||||    
T  53589454 tttactggtgtttttggtaaataataggactagttttgattattacaagtaggatcaaaccagaaatcctaggacattttgtgcaatctttttttcagaa 53589355  T
Q  207 aatgtatgaatgttcatcaaattca 231  Q
    |||  |||||||||||||| |||||    
T  53589354 aatacatgaatgttcatcatattca 53589330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 15987375 - 15987458
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatca 225  Q
    |||| |||||||||| | |||||||||||||||  |||||||||||||| ||| |||||  | ||||| |||||||||||||||    
T  15987375 tttggttattacaagtaggatcaaactagaaattctaggacatgttgtgcaatctttttccataaaatatatgaatgttcatca 15987458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 12144997 - 12145079
Alignment:
Q  255 aaacttaaagaaaa----ggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||||    ||||||||||| || ||||||||||| |||||  ||||||| |||||||||||||| ||||||||    
T  12144997 aaacttaaagaaaaaaagggtaaattgcattgtattaatgtaaaggtggtatgacaaattagattacatacattttgtatgac 12145079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 142 - 231
Target Start/End: Complemental strand, 45280258 - 45280169
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    ||||||||||||||| | |||||| ||||||||| ||||| |||||||| ||| |||||  ||||||| |||  |||||||||| |||||    
T  45280258 tttgattattacaagaacgatcaacctagaaatcgtaggatatgttgtgcaatctttttccagaaaatatatatatgttcatcatattca 45280169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 48167561 - 48167618
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| | ||||||||||||||| ||||||||||||||||||||| || |||||    
T  48167561 gatttttacatgtcataaaactatttatacgtaagtataataggatcgtttcgacagg 48167618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 393
Target Start/End: Complemental strand, 2357951 - 2357903
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    ||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  2357951 gatttttacatgtcataaaactatttacacgtaagtataatatgatcgt 2357903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 8737501 - 8737457
Alignment:
Q  146 attattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    |||||||||||||||||||||||||||||  ||||||||||||||    
T  8737501 attattacaagcatgatcaaactagaaattctaggacatgttgtg 8737457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 9089739 - 9089695
Alignment:
Q  146 attattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    |||||||||||||||||||||||||||||  ||||||||||||||    
T  9089739 attattacaagcatgatcaaactagaaattctaggacatgttgtg 9089695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 12144761 - 12144881
Alignment:
Q  105 ttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtag 204  Q
    |||||||||||||||||||||||||   ||| || | |||| |||||||||| | ||| |||| ||||||| || ||||||||  | ||| |||||  ||    
T  12144761 ttgtttaccggtgtttttggtaaacaataaggctggttttggttattacaagtaggattaaaccagaaatcctacgacatgttaggcaatcttttttaag 12144860  T
Q  205 aaaatgtatgaatgttcatca 225  Q
    ||| ||| |||||||||||||    
T  12144861 aaagtgtttgaatgttcatca 12144881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 25320987 - 25321050
Alignment:
Q  137 ctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatattttt 200  Q
    |||| ||||||||||||||||||| |||||| | ||||| |||||||||||||| ||| |||||    
T  25320987 ctagttttgattattacaagcatggtcaaaccaaaaatcgtaggacatgttgtgcaatcttttt 25321050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 290
Target Start/End: Complemental strand, 9101788 - 9101731
Alignment:
Q  232 gacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatg 290  Q
    |||||||||||||||||| | || |||||||||||||| ||||||||| ||||||||||    
T  9101788 gacttaaaagtttaaaaa-gcagcaacttaaagaaaagttaaattgcattgcattaatg 9101731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 33248790 - 33248724
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||| | ||||||||| | |||||||||||||||||| ||| |||||||||||||| ||| ||||    
T  33248790 ctgatgtaagatttttacatgtcataaaactatttacacataattataataggatcgtttccgcagg 33248724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 4022810 - 4022757
Alignment:
Q  265 aaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattaca 318  Q
    ||||||||||||||| | ||||||||||||||| ||||| |||| |||||||||    
T  4022810 aaaaggtaaattgcatttcattaatgtaaatgtagttaggcaaaccagattaca 4022757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 4026717 - 4026633
Alignment:
Q  105 ttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgt 189  Q
    ||||||| |||||||||| ||||||   ||  |||| ||||||||||| ||||| |||||||| |||||| ||||||||| ||||    
T  4026717 ttgtttatcggtgttttttgtaaacaataaaactagttttgattattataagcaagatcaaaccagaaattttaggacatattgt 4026633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 333
Target Start/End: Original strand, 15759600 - 15759664
Alignment:
Q  269 ggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||| || |||||  |||| |||||| |||||||||||||||||||| ||| ||||||    
T  15759600 ggtaaattgcattgtattaagataaaggtggtttgacaaatcagattacatacaatctatatgac 15759664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 324
Target Start/End: Original strand, 17132702 - 17132769
Alignment:
Q  256 aacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacatt 324  Q
    |||||||||||||| |||||| || |||||||| ||||| |||||| |||||||||  |||||||||||    
T  17132702 aacttaaagaaaag-taaatttcattgcattaaagtaaaggtggttcgacaaatcaagttacatacatt 17132769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 19954656 - 19954621
Alignment:
Q  25 acacttagaaaataatttgaaaagttatggaagtta 60  Q
    |||||| |||||||||||||||||||||||||||||    
T  19954656 acacttggaaaataatttgaaaagttatggaagtta 19954621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 129
Target Start/End: Complemental strand, 29614961 - 29614930
Alignment:
Q  98 tgccaatttgtttaccggtgtttttggtaaac 129  Q
    ||||||||||||||||||||||||||||||||    
T  29614961 tgccaatttgtttaccggtgtttttggtaaac 29614930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 333
Target Start/End: Original strand, 48896019 - 48896117
Alignment:
Q  234 cttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcatt--aatgtaaatgtggttagacaaatcagattacatacattctgtatg 331  Q
    |||||||||| |||||| ||  |||||||||||| | |||||| || ||||||  |||||||| |||||| |||||| ||| ||||||||||| ||||||    
T  48896019 cttaaaagttcaaaaacata--aacttaaagaaatg-taaatttcattgcatttaaatgtaaaggtggttcgacaaaccagtttacatacattatgtatg 48896115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 402
Target Start/End: Original strand, 4742387 - 4742429
Alignment:
Q  360 taaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||    
T  4742387 taaaactatttacacgtgagtataataggatcgtttccgcagg 4742429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 231
Target Start/End: Complemental strand, 17439443 - 17439361
Alignment:
Q  149 attacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    ||||||||||||||||||  | ||||| || ||||||||  | ||| |||||  ||||| ||||||||||||||||| |||||    
T  17439443 attacaagcatgatcaaatcataaatcataagacatgttaagcaatcttttttcagaaattgtatgaatgttcatcatattca 17439361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 4766011 - 4765963
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    |||| |||||||||||| || ||||| ||||||| ||||||||||||||    
T  4766011 tttggttattacaagcaggaacaaaccagaaatcctaggacatgttgtg 4765963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 9101988 - 9101920
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaat 174  Q
    ||||||||||| | ||||||||||   ||| ||| |||||||||||||||| |  ||||||||||||||    
T  9101988 tgtttaccggtatatttggtaaacaagaagactaactttgattattacaagaagcatcaaactagaaat 9101920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 26010709 - 26010749
Alignment:
Q  147 ttattacaagcatgatcaaactagaaatcttaggacatgtt 187  Q
    |||||||||||| ||| |||| |||||||||||||||||||    
T  26010709 ttattacaagcaggattaaaccagaaatcttaggacatgtt 26010749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 184
Target Start/End: Complemental strand, 39584002 - 39583974
Alignment:
Q  156 gcatgatcaaactagaaatcttaggacat 184  Q
    |||||||||||||||||||||||||||||    
T  39584002 gcatgatcaaactagaaatcttaggacat 39583974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 9667057 - 9667123
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9667057 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 9667123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 39000543 - 39000608
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39000543 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 39000608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 431702 - 431768
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  431702 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 431768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 12167577 - 12167643
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12167577 ctgatgaaggtttttcacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 12167643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 336 - 402
Target Start/End: Original strand, 33491559 - 33491625
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33491559 ctgataaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtctacagg 33491625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 38121294 - 38121359
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  38121294 tgatgaaggatttttacctctcataaaattatttacacgtaagtataataagatcgtgtccacagg 38121359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 231
Target Start/End: Complemental strand, 24634096 - 24633965
Alignment:
Q  100 ccaatttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttt 199  Q
    ||||||||||||||| ||||||| ||||||   ||| |||| ||||||||||||||||| ||||| || | ||||| |  |||||||| || ||| ||||    
T  24634096 ccaatttgtttaccgatgtttttcgtaaacaataagactagttttgattattacaagcaggatcacaccataaatcctttgacatgttatgcaatttttt 24633997  T
Q  200 tgtagaaaatgtatgaatgttcatcaaattca 231  Q
    | |||||| ||||||||||||||||| |||||    
T  24633996 tctagaaattgtatgaatgttcatcatattca 24633965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 25018415 - 25018516
Alignment:
Q  106 tgtttaccggtgtttttg-gtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtag 204  Q
    |||||||||||||||||  ||||||   ||| |||| |||||||||||||||||||||||||| ||||||| |||||||||||||| ||| ||||| |||    
T  25018415 tgtttaccggtgtttttttgtaaac---aaggctagttttgattattacaagcatgatcaaaccagaaatcctaggacatgttgtgcaatctttttctag 25018511  T
Q  205 aaaat 209  Q
    |||||    
T  25018512 aaaat 25018516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 44787473 - 44787392
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcaga 313  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||||  |||||| |||||||||||    
T  44787473 agacttaaaagtt-aaaaacgcagaaacttaaagaaaaggtaaattgcattgcaataatgtaacggtggttcgacaaatcaga 44787392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 337 - 398
Target Start/End: Complemental strand, 49249864 - 49249802
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtcca 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  49249864 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatatatgatcgtgtcca 49249802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 24633417 - 24633332
Alignment:
Q  248 aacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||| |||||||||||||||| |||||||||| | ||||||||||||  |||||  ||||||||||||||||||||| ||||||||    
T  24633417 aacgcagaaacttaaagaaaatgtaaattgcattacattaatgtaaagttggttctacaaatcagattacatacattatgtatgac 24633332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 33379682 - 33379565
Alignment:
Q  108 tttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaa 207  Q
    ||||||||||||||||||||||  ||||  ||| ||||||||||||||||| || ||||  |||||||||||||||| ||||| ||| |||||  | |||    
T  33379682 tttaccggtgtttttggtaaacaacaagattagttttgattattacaagcaggaccaaatcagaaatcttaggacatattgtgcaatcttttttcataaa 33379583  T
Q  208 atgtatgaatgttcatca 225  Q
     | |||||||||||||||    
T  33379582 gtatatgaatgttcatca 33379565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 231 - 324
Target Start/End: Complemental strand, 33379476 - 33379384
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacatt 324  Q
    |||||||||||||||||| |  | |||||||||||||| ||| |||||| ||||||||||||||  ||||| ||||||||||||||||| ||||    
T  33379476 agacttaaaagtttaaaa-cacataaacttaaagaaaacgtagattgcattgcattaatgtaaagctggtttgacaaatcagattacattcatt 33379384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 16832145 - 16832210
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||| ||| ||||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||    
T  16832145 tgatgtaggttttttacatctcataaaactatttacacgtgagtataataggatcgtttccgcagg 16832210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 40999474 - 40999531
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||| ||| ||||    
T  40999474 gatttttacatgtcataaaactatttacacgtaagtataataggatcgtttccgcagg 40999531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 44787681 - 44787556
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtaga 205  Q
    |||||||||||||||||| |||||  |||| |||| ||||||||||||||  | |||||||| | ||||| || ||||||||||| ||| |||||  |      
T  44787681 tgtttaccggtgtttttgataaacaacaagactagttttgattattacaactaggatcaaaccataaatcatatgacatgttgtgcaatcttttttcaag 44787582  T
Q  206 aaatgtatgaatgttcatcaaattca 231  Q
    |||  ||||||||||||||| |||||    
T  44787581 aaagatatgaatgttcatcatattca 44787556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 22608233 - 22608135
Alignment:
Q  93 gggcatgccaatttgtttaccggtgtttttggtaaacgc--caagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    |||| ||||||||||||||||||||||| ||||||||    |||| || | || ||||||||||| ||||||||||| ||||||| ||||||||||||||    
T  22608233 gggcgtgccaatttgtttaccggtgtttctggtaaacaatacaag-ctggtttcgattattacaaacatgatcaaaccagaaatcctaggacatgttgtg 22608135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 33102844 - 33102892
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  33102844 tttgattattacaagcaggatcaaaccagaaatcttaggacatgttgtg 33102892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 391
Target Start/End: Original strand, 11738168 - 11738214
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatc 391  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||    
T  11738168 gatttttacatgtcataaaactatttacacgtaagtataataggatc 11738214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 231 - 333
Target Start/End: Original strand, 25018624 - 25018725
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcatt--aatgtaaatgtggttagacaaatcagattacatacattctgt 328  Q
    |||||||||||||||||  || ||||||||||||||| ||||||||||| ||||||  ||| |||| |||||| | ||||| || ||||||||||| |||    
T  25018624 agacttaaaagtttaaa--cgcagaaacttaaagaaa-ggtaaattgcattgcatttaaatataaaggtggttcggcaaattagtttacatacattttgt 25018720  T
Q  329 atgac 333  Q
    |||||    
T  25018721 atgac 25018725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 393
Target Start/End: Complemental strand, 16131293 - 16131245
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    ||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  16131293 gatttttacatgtcataaaactatttacaagtaagtataataggatcgt 16131245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 16083448 - 16083547
Alignment:
Q  132 caagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    |||| |||| |||||||||||||| || |||||||| ||||| | ||||||||||| || ||| |||||  | |||||  || |||||||||||||||||    
T  16083448 caagactagttttgattattacaaacaggatcaaaccagaaaccctaggacatgttatgcaatctttttccataaaatagattaatgttcatcaaattca 16083547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 4521882 - 4521812
Alignment:
Q  161 atcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatgaatgttcatcaaattca 231  Q
    ||||||||||||||| | |||||||||||| ||| ||||| || ||||| |||||| |||||||| |||||    
T  4521882 atcaaactagaaatcattggacatgttgtgcaatttttttctataaaatatatgaaagttcatcatattca 4521812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Original strand, 17615074 - 17615128
Alignment:
Q  146 attattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatattttt 200  Q
    ||||||||||||| |||||||| ||||||| |||||||||||||| ||| |||||    
T  17615074 attattacaagcaggatcaaaccagaaatcctaggacatgttgtgcaatgttttt 17615128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 13217418 - 13217475
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||| | |||||||| ||||||||||| |||||||||||||||| ||| ||||    
T  13217418 gatttttacatgtcataaaattatttacacgtgagtataataggatcgtttccgcagg 13217475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 393
Target Start/End: Original strand, 20225735 - 20225780
Alignment:
Q  348 ttttacctctcataaaactatttacacgtaagtataataggatcgt 393  Q
    |||||| | ||||||||||||||||||| |||||||||||||||||    
T  20225735 ttttacatgtcataaaactatttacacgaaagtataataggatcgt 20225780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 106 - 200
Target Start/End: Original strand, 11821583 - 11821673
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatattttt 200  Q
    ||||||||||||||||||||||||  || | |||| ||||||||||||||| ||  |||||| ||||||| ||||||| |||||| ||| |||||    
T  11821583 tgtttaccggtgtttttggtaaacaacatgactagttttgattattacaag-at--tcaaaccagaaatc-taggacaagttgtgcaatcttttt 11821673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 23455188 - 23455233
Alignment:
Q  288 atgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||| |||||| ||||||||| |||||||||||| ||||||||    
T  23455188 atgtaaaggtggttcgacaaatcatattacatacattttgtatgac 23455233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 25969112 - 25969144
Alignment:
Q  98 tgccaatttgtttaccggtgtttttggtaaacg 130  Q
    |||||||||||||||| ||||||||||||||||    
T  25969112 tgccaatttgtttacccgtgtttttggtaaacg 25969144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 28261 - 28326
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28261 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 28326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 175401 - 175336
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  175401 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 175336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 835 - 731
Alignment:
Q  116 tgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaatgtatga 215  Q
    ||||||||||||||  ||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||| ||| |||||  | |||||||||||    
T  835 tgtttttggtaaactacaagtctagctttgattattacaagcaagttcaaactagaaatcctaggacatgttgtgcaatctttttccataaaatgtatga 736  T
Q  216 atgtt 220  Q
    |||||    
T  735 atgtt 731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 10392 - 10314
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  10392 aaacttaaagaaaaggtaaattgcattacattaatgtaaaggtggtttgacaaatcagattacatacattatgtatgac 10314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 12996 - 12929
Alignment:
Q  336 ctgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12996 ctgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 12929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 402
Target Start/End: Original strand, 349966 - 350033
Alignment:
Q  335 cctgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  349966 cctgataaaggatttttacctctcacaaaactatttacacgtaagtataataggatcgtgtccacagg 350033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 376500 - 376450
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaa 192  Q
    ||||||||||||||| | |||||||| ||||||| ||||||||||||||||    
T  376500 tttgattattacaaggaggatcaaaccagaaatcctaggacatgttgtgaa 376450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 337 - 402
Target Start/End: Complemental strand, 9543 - 9477
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9543 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 9477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 25011 - 25077
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  25011 tgatgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 25077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 337 - 402
Target Start/End: Original strand, 168770 - 168835
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  168770 tgatgaaggatttttacttctcataaaactacttacacgtaagtataataggatcgtgtccacagg 168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 360 - 402
Target Start/End: Original strand, 115953 - 115995
Alignment:
Q  360 taaaactatttacacgtaagtataataggatcgtgtccacagg 402  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||    
T  115953 taaaactatttacacgtgagtataataggatcgtttccgcagg 115995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 11850 - 11914
Alignment:
Q  339 atgaaggatttttacctctcataaaactatttacacgtaagtata-ataggatcgtgtccacagg 402  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  11850 atgaaggatttttacctctcataaaactatttacacgtaagtatatataggatcgtgtccacagg 11914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 6392 - 6470
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||||||||||||||| | |||||||||||| | |||| |||||||||||||||||||||| ||||||||    
T  6392 aaacttaaagaaaaggtaaattgcattacattaatgtaaaggcggttcgacaaatcagattacatacattatgtatgac 6470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 337 - 399
Target Start/End: Complemental strand, 7530 - 7469
Alignment:
Q  337 tgatgaaggatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccac 399  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  7530 tgatgaaggatttttacctctcataaaactatttacacgtgagtataataggat-gtgtccac 7469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 48; Significance: 3e-18; HSPs: 4)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 234 - 333
Target Start/End: Complemental strand, 33373 - 33280
Alignment:
Q  234 cttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||     |||||||||| |||||| ||||| ||| |||||||||||| ||||||||    
T  33373 cttaaaagtttaaaa-cgtataaacttaaagaaaaggtaaattgca-----ttaatgtaaaagtggttcgacaattcatattacatacattatgtatgac 33280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 333
Target Start/End: Original strand, 48248 - 48321
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||||||||||||| |||||||||| |     |||||||| |||||| |||||||||||||||||||||||||||||||    
T  48248 aaacttaaagaaaatgtaaattgcaat-----aatgtaaaagtggttcgacaaatcagattacatacattctgtatgac 48321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 46533 - 46432
Alignment:
Q  29 ttagaaaataatttgaaaa-gttatggaagttacttttaaaaaattgcataaatagaatttcattgggcatgccaatttgtttaccggtgtttttggtaa 127  Q
    ||||||||||||||||||| ||||||||| ||||||  ||||  ||||| ||||||  |  || ||| | ||||||||||||||||| ||||||||||||    
T  46533 ttagaaaataatttgaaaatgttatggaaattacttccaaaattttgcacaaatagggtcccactggacgtgccaatttgtttaccgttgtttttggtaa 46434  T
Q  128 ac 129  Q
    ||    
T  46433 ac 46432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 316
Target Start/End: Complemental strand, 51733 - 51677
Alignment:
Q  255 aaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagatta 316  Q
    ||||||||||||| |||||||||||     |||||||||| |||||| ||||||||||||||    
T  51733 aaacttaaagaaatggtaaattgca-----ttaatgtaaaagtggttcgacaaatcagatta 51677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 190
Target Start/End: Complemental strand, 39225 - 39170
Alignment:
Q  135 gtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    |||||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  39225 gtctagttttggttattacaagcaggatcaaactagaaatcttaggacatgttgtg 39170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 333
Target Start/End: Complemental strand, 39007 - 38925
Alignment:
Q  246 aaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    |||||| | ||||||||||||||| |||||||||     |||||||||| |||||| |||||||||||||||||||||| | ||||||    
T  39007 aaaacgcataaacttaaagaaaagataaattgca-----ttaatgtaaaggtggttcgacaaatcagattacatacattttatatgac 38925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 345 - 400
Target Start/End: Original strand, 75675 - 75730
Alignment:
Q  345 gatttttacctctcataaaactatttacacgtaagtataataggatcgtgtccaca 400  Q
    ||||||||| | |||||||||||||||||||| |||||||||||||||||||||||    
T  75675 gatttttacatgtcataaaactatttacacgtgagtataataggatcgtgtccaca 75730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 192032 - 191961
Alignment:
Q  137 ctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtagaaaa 208  Q
    |||| |||| |||||| ||||||||||||||||||||||||| ||||||||||| ||  ||||| |||||||    
T  192032 ctagttttggttattataagcatgatcaaactagaaatcttacgacatgttgtggaaagtttttctagaaaa 191961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 236 - 333
Target Start/End: Complemental strand, 27034 - 26940
Alignment:
Q  236 taaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacattctgtatgac 333  Q
    ||||||||||||| || ||||||| ||||||||| ||||||||| ||||||||  |||| |||||| ||||||| |||||||||||||| ||||||||    
T  27034 taaaagtttaaaa-cgcagaaact-aaagaaaagataaattgcattgcattaaa-taaaggtggttcgacaaattagattacatacattatgtatgac 26940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 89532 - 89657
Alignment:
Q  106 tgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtgaaatatttttgtaga 205  Q
    ||||||||||||||||| ||||||   ||| |||| ||||||||||||||| | ||| |||  ||||||| |||||||| ||| | ||| |||||  | |    
T  89532 tgtttaccggtgtttttagtaaacaataagactagttttgattattacaaggaggattaaagcagaaatcctaggacatattgcgcaatctttttccata 89631  T
Q  206 aaatgtatgaatgttcatcaaattca 231  Q
    |||| ||||||||||||||| |||||    
T  89632 aaatatatgaatgttcatcatattca 89657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 231 - 324
Target Start/End: Original strand, 22986 - 23075
Alignment:
Q  231 agacttaaaagtttaaaaacgtagaaacttaaagaaaaggtaaattgcactgcattaatgtaaatgtggttagacaaatcagattacatacatt 324  Q
    ||||||||||||||||| ||    |||||||||||||| |||||||||| || |||||| ||||||||||   ||||||||||||| |||||||    
T  22986 agacttaaaagtttaaacac----aaacttaaagaaaacgtaaattgcattgaattaatttaaatgtggtacaacaaatcagattatatacatt 23075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 89 - 190
Target Start/End: Original strand, 4304 - 4406
Alignment:
Q  89 cattgggcatgccaatttgtttaccggtgtttttggtaaacgccaagtc-tagctttgattattacaagcatgatcaaactagaaatcttaggacatgtt 187  Q
    ||||| || ||||||| ||||||||||||||||||||||||   |||   | | ||||||||||||||||| |||||||| ||||||| |||||| ||||    
T  4304 cattgcgcgtgccaatatgtttaccggtgtttttggtaaacaataagggatggttttgattattacaagcaggatcaaaccagaaatcctaggacgtgtt 4403  T
Q  188 gtg 190  Q
    |||    
T  4404 gtg 4406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 16989 - 17066
Alignment:
Q  98 tgccaatttgtttaccggtgtttttggtaaacgccaagtctagctttgattattacaagcatgatcaaactagaaatc 175  Q
    ||||||| |||||||| |||||||||||||||   |||    | ||||||||||||||||| ||||||||||||||||    
T  16989 tgccaatatgtttaccagtgtttttggtaaacaataagggatggtttgattattacaagcaggatcaaactagaaatc 17066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 15047 - 15150
Alignment:
Q  88 tcattgggcatgccaatttgtttaccggtgtttttggtaaacgccaagtc-tagctttgattattacaagcatgatcaaactagaaatcttaggacatgt 186  Q
    |||||| || ||||||| |||||||||||||||| |||||||   |||   | | |||||||||||||||||||||||||| | ||||| |||||| |||    
T  15047 tcattgagcgtgccaatatgtttaccggtgttttgggtaaacaataagggatggttttgattattacaagcatgatcaaaccacaaatcctaggacgtgt 15146  T
Q  187 tgtg 190  Q
    ||||    
T  15147 tgtg 15150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 20306 - 20399
Alignment:
Q  98 tgccaatttgtttaccggtgtttttggtaaacgccaagtc-tagctttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    |||||||| ||||||||||||||| |||||||   |||   | | |||| |||||||||||| |||||||| ||||||||| ||||||||||||    
T  20306 tgccaattagtttaccggtgttttgggtaaacaagaagggatggttttggttattacaagcaggatcaaaccagaaatcttgggacatgttgtg 20399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1102 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 1223 - 1175
Alignment:
Q  142 tttgattattacaagcatgatcaaactagaaatcttaggacatgttgtg 190  Q
    |||| |||||||||||| |||||||| ||||||  ||||||||||||||    
T  1223 tttggttattacaagcaagatcaaaccagaaattctaggacatgttgtg 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University