View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3651_low_1 (Length: 707)

Name: NF3651_low_1
Description: NF3651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3651_low_1
NF3651_low_1
[»] chr4 (44 HSPs)
chr4 (115-700)||(48911227-48911813)
chr4 (19-101)||(12624656-12624740)
chr4 (26-102)||(26203089-26203167)
chr4 (19-102)||(20291299-20291384)
chr4 (315-472)||(48975036-48975193)
chr4 (19-74)||(28116566-28116621)
chr4 (19-102)||(31486446-31486532)
chr4 (21-78)||(14602718-14602775)
chr4 (19-76)||(29584881-29584938)
chr4 (22-107)||(13096606-13096692)
chr4 (19-74)||(38136344-38136399)
chr4 (22-72)||(25477216-25477266)
chr4 (19-73)||(37175083-37175136)
chr4 (19-76)||(3684249-3684306)
chr4 (19-75)||(30049419-30049475)
chr4 (22-74)||(30153286-30153338)
chr4 (22-74)||(52198792-52198844)
chr4 (28-75)||(20293731-20293778)
chr4 (22-72)||(20262458-20262508)
chr4 (19-77)||(22651450-22651508)
chr4 (19-73)||(34543692-34543746)
chr4 (28-103)||(54701357-54701434)
chr4 (22-67)||(50782774-50782819)
chr4 (39-79)||(754502-754542)
chr4 (19-74)||(5416930-5416983)
chr4 (19-67)||(19654424-19654472)
chr4 (25-101)||(20185723-20185802)
chr4 (25-102)||(32866463-32866542)
chr4 (39-78)||(722377-722416)
chr4 (37-72)||(56217102-56217137)
chr4 (26-101)||(22750910-22750987)
chr4 (19-68)||(3094177-3094226)
chr4 (22-67)||(5536493-5536538)
chr4 (19-68)||(37625186-37625235)
chr4 (26-67)||(39237657-39237698)
chr4 (22-67)||(46729302-46729346)
chr4 (19-67)||(48472556-48472605)
chr4 (297-426)||(48952213-48952342)
chr4 (22-67)||(51787767-51787812)
chr4 (24-68)||(5932882-5932925)
chr4 (19-67)||(33246558-33246606)
chr4 (19-67)||(41920099-41920147)
chr4 (585-625)||(48952023-48952063)
chr4 (19-67)||(56373405-56373453)
[»] scaffold0536 (3 HSPs)
scaffold0536 (257-700)||(5536-5979)
scaffold0536 (274-700)||(9553-9963)
scaffold0536 (585-694)||(812-921)
[»] chr8 (29 HSPs)
chr8 (19-101)||(43980645-43980727)
chr8 (19-101)||(24962427-24962510)
chr8 (19-102)||(26878790-26878875)
chr8 (18-104)||(24276616-24276704)
chr8 (19-79)||(22590359-22590419)
chr8 (19-101)||(31746467-31746551)
chr8 (19-67)||(14577714-14577762)
chr8 (19-103)||(34882628-34882714)
chr8 (19-72)||(16644098-16644151)
chr8 (34-74)||(885451-885491)
chr8 (19-79)||(7172203-7172263)
chr8 (22-78)||(40602106-40602162)
chr8 (22-76)||(2562795-2562849)
chr8 (23-73)||(15702248-15702298)
chr8 (22-101)||(40790749-40790830)
chr8 (22-67)||(37956117-37956162)
chr8 (24-72)||(25198280-25198328)
chr8 (19-67)||(25888591-25888639)
chr8 (24-67)||(14522671-14522714)
chr8 (41-105)||(40517699-40517765)
chr8 (22-68)||(57253-57299)
chr8 (22-68)||(14846986-14847032)
chr8 (19-104)||(14906559-14906645)
chr8 (22-72)||(25185021-25185071)
chr8 (26-67)||(10396297-10396338)
chr8 (19-105)||(17933661-17933748)
chr8 (22-67)||(24512232-24512277)
chr8 (22-67)||(38761423-38761468)
chr8 (23-67)||(16002789-16002833)
[»] chr6 (20 HSPs)
chr6 (19-102)||(19838890-19838975)
chr6 (22-101)||(22410908-22410988)
chr6 (22-101)||(15981754-15981835)
chr6 (19-75)||(31945974-31946030)
chr6 (22-73)||(1763803-1763854)
chr6 (19-66)||(3888004-3888051)
chr6 (22-101)||(16327083-16327164)
chr6 (22-101)||(16350481-16350562)
chr6 (22-67)||(5895727-5895772)
chr6 (22-67)||(11302851-11302896)
chr6 (22-78)||(27441763-27441819)
chr6 (19-74)||(28238376-28238431)
chr6 (28-66)||(5084612-5084650)
chr6 (24-78)||(6791363-6791417)
chr6 (19-68)||(3729384-3729433)
chr6 (19-68)||(5604539-5604588)
chr6 (22-67)||(16186569-16186614)
chr6 (19-67)||(11081892-11081940)
chr6 (19-67)||(12514647-12514695)
chr6 (19-67)||(31536008-31536056)
[»] chr5 (24 HSPs)
chr5 (19-102)||(39690546-39690631)
chr5 (19-101)||(21912081-21912164)
chr5 (19-97)||(27642467-27642546)
chr5 (19-102)||(38972186-38972271)
chr5 (19-75)||(43060570-43060626)
chr5 (19-74)||(30348137-30348192)
chr5 (19-104)||(3559087-3559172)
chr5 (27-73)||(4378132-4378178)
chr5 (24-78)||(7510591-7510645)
chr5 (19-69)||(14044558-14044608)
chr5 (22-101)||(15898526-15898606)
chr5 (24-78)||(25690754-25690808)
chr5 (22-76)||(27587825-27587879)
chr5 (22-102)||(10523337-10523418)
chr5 (28-72)||(4857567-4857611)
chr5 (19-67)||(11980712-11980760)
chr5 (22-78)||(20976353-20976409)
chr5 (19-67)||(21574940-21574988)
chr5 (147-203)||(31742730-31742786)
chr5 (22-76)||(35569068-35569122)
chr5 (19-68)||(18729583-18729632)
chr5 (22-67)||(29866185-29866230)
chr5 (19-108)||(32067781-32067872)
chr5 (19-67)||(36177288-36177336)
[»] chr1 (42 HSPs)
chr1 (19-102)||(15512841-15512926)
chr1 (19-102)||(28949024-28949109)
chr1 (19-101)||(31305277-31305361)
chr1 (22-102)||(44335248-44335329)
chr1 (22-103)||(23982655-23982738)
chr1 (19-77)||(2342889-2342947)
chr1 (19-69)||(38680468-38680518)
chr1 (19-101)||(4813522-4813606)
chr1 (19-76)||(13723538-13723595)
chr1 (19-101)||(15179369-15179453)
chr1 (22-103)||(8984724-8984807)
chr1 (28-102)||(51996912-51996989)
chr1 (19-72)||(30336049-30336102)
chr1 (24-72)||(32047432-32047480)
chr1 (19-62)||(15911612-15911655)
chr1 (24-104)||(27531055-27531137)
chr1 (19-62)||(28723713-28723756)
chr1 (22-73)||(30898626-30898677)
chr1 (22-72)||(3143393-3143443)
chr1 (22-72)||(5085152-5085202)
chr1 (19-102)||(10842287-10842372)
chr1 (22-67)||(16582528-16582573)
chr1 (22-67)||(28334278-28334323)
chr1 (27-101)||(52141245-52141321)
chr1 (21-73)||(20564764-20564816)
chr1 (19-67)||(25258325-25258373)
chr1 (19-67)||(32152153-32152201)
chr1 (24-76)||(47643529-47643580)
chr1 (19-100)||(50692369-50692452)
chr1 (19-66)||(31808032-31808079)
chr1 (22-69)||(48721931-48721978)
chr1 (24-78)||(4817969-4818023)
chr1 (24-78)||(4829769-4829823)
chr1 (22-72)||(10160709-10160759)
chr1 (19-73)||(32144300-32144354)
chr1 (22-72)||(33231830-33231880)
chr1 (19-68)||(23393572-23393621)
chr1 (22-67)||(25269372-25269417)
chr1 (22-67)||(34696946-34696991)
chr1 (34-67)||(35001345-35001378)
chr1 (19-67)||(3143794-3143842)
chr1 (22-99)||(46495270-46495349)
[»] chr2 (31 HSPs)
chr2 (19-101)||(17663584-17663668)
chr2 (19-101)||(20361946-20362027)
chr2 (22-101)||(45214685-45214766)
chr2 (19-74)||(3645312-3645367)
chr2 (19-78)||(42250937-42250996)
chr2 (22-79)||(27297561-27297618)
chr2 (19-78)||(41865701-41865760)
chr2 (19-102)||(247619-247704)
chr2 (22-72)||(44424586-44424636)
chr2 (19-68)||(2395797-2395846)
chr2 (19-68)||(4398585-4398633)
chr2 (19-109)||(21012811-21012897)
chr2 (24-73)||(28265017-28265066)
chr2 (24-68)||(35178859-35178903)
chr2 (24-104)||(40346147-40346229)
chr2 (22-101)||(14420637-14420718)
chr2 (22-76)||(27749499-27749553)
chr2 (22-101)||(38449778-38449859)
chr2 (19-68)||(2917158-2917207)
chr2 (22-67)||(15851527-15851572)
chr2 (22-67)||(17251025-17251070)
chr2 (22-67)||(37355032-37355077)
chr2 (26-102)||(44421408-44421486)
chr2 (26-76)||(4033568-4033618)
chr2 (22-72)||(9718236-9718286)
chr2 (19-73)||(26512061-26512115)
chr2 (22-68)||(41665705-41665751)
chr2 (19-68)||(24774860-24774909)
chr2 (22-67)||(44274731-44274776)
chr2 (24-68)||(1829729-1829773)
chr2 (19-67)||(32860457-32860505)
[»] chr3 (36 HSPs)
chr3 (22-101)||(46435796-46435877)
chr3 (19-73)||(14645952-14646006)
chr3 (22-94)||(31531491-31531565)
chr3 (19-73)||(11388110-11388164)
chr3 (19-102)||(20945363-20945448)
chr3 (28-102)||(44338040-44338116)
chr3 (22-97)||(51263046-51263122)
chr3 (19-73)||(11344547-11344601)
chr3 (22-76)||(26517281-26517335)
chr3 (19-68)||(11393916-11393965)
chr3 (22-69)||(46048515-46048562)
chr3 (19-74)||(52325566-52325621)
chr3 (26-68)||(29645352-29645394)
chr3 (22-72)||(30476031-30476081)
chr3 (19-73)||(42010857-42010911)
chr3 (22-79)||(23157078-23157135)
chr3 (19-76)||(25750513-25750570)
chr3 (45-103)||(28477334-28477394)
chr3 (19-76)||(31650728-31650785)
chr3 (19-67)||(27638140-27638188)
chr3 (19-102)||(37729092-37729176)
chr3 (19-101)||(41740036-41740121)
chr3 (19-66)||(41825200-41825247)
chr3 (22-72)||(12077809-12077859)
chr3 (19-102)||(29676802-29676887)
chr3 (19-69)||(33287859-33287909)
chr3 (22-72)||(41727304-41727354)
chr3 (24-73)||(26121321-26121370)
chr3 (24-102)||(28228137-28228217)
chr3 (22-67)||(35145235-35145280)
chr3 (19-68)||(41543670-41543719)
chr3 (22-67)||(42891414-42891459)
chr3 (21-66)||(49891946-49891991)
chr3 (19-71)||(48581309-48581361)
chr3 (19-67)||(49000447-49000495)
chr3 (22-74)||(50363015-50363067)
[»] chr7 (25 HSPs)
chr7 (19-105)||(20124144-20124232)
chr7 (22-102)||(20123409-20123491)
chr7 (23-102)||(23875996-23876077)
chr7 (19-73)||(26632836-26632890)
chr7 (22-104)||(29636104-29636188)
chr7 (19-78)||(48193600-48193659)
chr7 (19-97)||(37491680-37491760)
chr7 (19-101)||(40740911-40740994)
chr7 (19-74)||(21753433-21753488)
chr7 (22-67)||(4089564-4089609)
chr7 (26-101)||(6376201-6376273)
chr7 (23-67)||(19236132-19236176)
chr7 (22-74)||(21388231-21388283)
chr7 (20-67)||(46783903-46783950)
chr7 (19-73)||(31373759-31373813)
chr7 (22-68)||(37048030-37048076)
chr7 (22-72)||(48610200-48610250)
chr7 (22-72)||(48767555-48767605)
chr7 (22-67)||(2276641-2276686)
chr7 (22-67)||(18122106-18122151)
chr7 (22-67)||(25750364-25750409)
chr7 (22-67)||(37673733-37673778)
chr7 (22-67)||(40263707-40263752)
chr7 (19-67)||(27213483-27213531)
chr7 (19-59)||(29992979-29993019)
[»] scaffold1091 (1 HSPs)
scaffold1091 (19-76)||(1974-2031)
[»] scaffold0005 (1 HSPs)
scaffold0005 (21-78)||(214603-214660)
[»] scaffold0038 (1 HSPs)
scaffold0038 (19-74)||(38538-38593)
[»] scaffold0003 (1 HSPs)
scaffold0003 (22-78)||(45542-45598)


Alignment Details
Target: chr4 (Bit Score: 535; Significance: 0; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 535; E-Value: 0
Query Start/End: Original strand, 115 - 700
Target Start/End: Original strand, 48911227 - 48911813
Alignment:
Q  115 gggcaaccagagttaggatc-tctccattgttggacattaaaagcaatagcagaaacaattaattagtacaatacctctctcatcatcacgttcattcta 213  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  48911227 gggcaaccagagttaggatcctctccattgttggacattaaaagcaatagcagaaacagttaattgctacaatacctctctcatcatcacgttcattcta 48911326  T
Q  214 attcatatatagtatccaaacacacagaagacaaggcaaagatgatgaatacggaagaaggagaagagaaaccacttaatatatacttcataccttactt 313  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  || |||||||||||||||||    
T  48911327 attcattcatagtatccaaacacacagaagacaaggcaaagatgatgaatacggaagaaggagaagagaaagcacttaccatctacttcataccttactt 48911426  T
Q  314 agcacctggccacatgatccctctatgcgacatagcaactctctttgccttacgccgtcaaaatgtcaccatcataaccacaccctccaatgctcaaatc 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48911427 agcacctggccacatgatccctctatgcgacatagcaactctctttgccttacgccgtcaaaatgtcaccatcataaccacaccctccaatgctcaaatc 48911526  T
Q  414 cttggcaaatctattcctttaaaccaacaccttcgtattcacactgttccatttccttcacaagcagtaggcctccccgatggtgtcgaacccctcttca 513  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  48911527 cttggcaaatctattcctttaaaccaacaccttcgtattcacactgttccatttccttcacaagcagtaggcctccccgatggcgtcgaacccctcttca 48911626  T
Q  514 ccaccaccgacctcgacaacctcaccaaaatctatcgagcagccactctactccgaccaaccatccaacacttcgtggagcagcacccaccagattgcat 613  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48911627 ccaccaccgacctcgacaacctcaccaaaatctatcgagcagccactctactccgaccaaccatccaacacttcgtggagcagcacccaccagattgcat 48911726  T
Q  614 cgtcgctgatttcatgtatccttgggttcatgaacttgcaaacaagctacaaattcctagacttgctttcaacggtttctctctgtt 700  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48911727 cgtggctgatttcatgtatccttgggttcatgaacttgcaaacaagctacaaattcctagacttgctttcaacggtttctctctgtt 48911813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 12624740 - 12624656
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagta 101  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||||||||||||| |||||  |||||||||| ||||||||||||    
T  12624740 aatagtcacattaattacactaacaacttttcttaagaaatgtgaaaaaagcaacggggggttacatatagggacggagggagta 12624656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 26203167 - 26203089
Alignment:
Q  26 acattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    ||||||| |||| |||||||||||||||||||||||| |||||| ||||||||  |||||||||| |||||||||||||    
T  26203167 acattaattacagtaacaacttttcttaataaatgtggaaaaagtaaagggggcttacatatagggacggagggagtat 26203089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 20291384 - 20291299
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    |||||||||||||| |||| || ||||||||||||| ||||||||||||||||||||| |  |||||||||| ||| |||||||||    
T  20291384 aatagacacattaattacattaccaacttttcttaagaaatgtgaaaaaagcaaagggagtttacatatagggacgaagggagtat 20291299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 315 - 472
Target Start/End: Complemental strand, 48975193 - 48975036
Alignment:
Q  315 gcacctggccacatgatccctctatgcgacatagcaactctctttgccttacgccgtcaaaatgtcaccatcataaccacaccctccaatgctcaaatcc 414  Q
    |||||||||||||||| ||||||||||||||| || || |||||||||| | || ||||  |||| |||||||| ||||| ||||| ||||| ||||||     
T  48975193 gcacctggccacatgacccctctatgcgacattgctacactctttgcctcatgcggtcaccatgttaccatcattaccactccctctaatgcccaaatca 48975094  T
Q  415 ttggcaaatctattcctttaaaccaacaccttcgtattcacactgttccatttccttc 472  Q
    ||  |||||| || ||||   || | ||||| ||  |||| |||||||||||||||||    
T  48975093 ttctcaaatccatcccttctcacaaccacctccgccttcatactgttccatttccttc 48975036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 28116566 - 28116621
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  28116566 aatagacatattaattacactaacaacttttcttaaaaaatgtgaaaaaagcaaag 28116621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 31486532 - 31486446
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaa-aaaagc--aaagggggtacatataggaacggagggagtat 102  Q
    |||||||||||||| | ||||||||||||||||||| ||||||||| ||||||  ||||||  |||||||||| |||||||||||||    
T  31486532 aatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaaaagcaaaaagggcttacatatagggacggagggagtat 31486446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 14602718 - 14602775
Alignment:
Q  21 tagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||| ||| ||||    
T  14602718 tagacacattaattacactaacaacttttcttaagaaatgtgaaaaaagtaaaagggg 14602775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 29584938 - 29584881
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg 76  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||||||    
T  29584938 aatagacacattaattacactaacaatttttcttaagaaatgtgaaaaatgcaaaggg 29584881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 13096606 - 13096692
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtattattt 107  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||| |||||| |  || ||| ||| ||||||||||||| ||||    
T  13096606 agacacattaattacactaacaacttttcttaa-aaatgtgaaaaaagtaaagggagtttaaatacagggacggagggagtataattt 13096692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 38136399 - 38136344
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||    
T  38136399 aatagacacattaattacactaacaaattttcttaagaaatgtgaaaaaaccaaag 38136344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 25477266 - 25477216
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  25477266 agacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaa 25477216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 37175083 - 37175136
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||    
T  37175083 aatagacacattaattacac-aacaacttttcttaagaaatgtgaaaaaagcaaa 37175136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 3684249 - 3684306
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg 76  Q
    |||||||||||||| |||||  ||||  ||||||||||||||||||||||||||||||    
T  3684249 aatagacacattaattacaccgacaatctttcttaataaatgtgaaaaaagcaaaggg 3684306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 30049475 - 30049419
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagg 75  Q
    |||||||||||||| ||||||||  ||||||||||| |||||||||||||| |||||    
T  30049475 aatagacacattaattacactaatcacttttcttaaaaaatgtgaaaaaagtaaagg 30049419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 30153286 - 30153338
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||| ||||||    
T  30153286 agacacattaattacactgacaacttttcttaagaaatgtgaaaaacgcaaag 30153338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 52198792 - 52198844
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    ||||| ||||| |||||| |||||||||||||| |||||||||||||||||||    
T  52198792 agacatattaattacactgacaacttttcttaagaaatgtgaaaaaagcaaag 52198844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 20293778 - 20293731
Alignment:
Q  28 attaactacactaacaacttttcttaataaatgtgaaaaaagcaaagg 75  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||||||    
T  20293778 attaattacactgacaacttttcttaagaaatgtgaaaaaagcaaagg 20293731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 20262458 - 20262508
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||| ||||    
T  20262458 agacacattaattacactgacaacttttcttaagaaatgtgaaaaaggcaa 20262508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 22651508 - 22651450
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggg 77  Q
    |||| ||||||||| |||| ||| || ||||||||| ||||||||||||||||||||||    
T  22651508 aataaacacattaattacattaataaattttcttaagaaatgtgaaaaaagcaaagggg 22651450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 34543746 - 34543692
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    |||||||||||||| |||||  |||||||||||||| ||||||||| ||||||||    
T  34543746 aatagacacattaattacacggacaacttttcttaagaaatgtgaataaagcaaa 34543692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 54701357 - 54701434
Alignment:
Q  28 attaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggg--gtacatataggaacggagggagtatt 103  Q
    ||||| |||||| |||||||||||||| |||||||||||| | ||||| |   |||||| ||||||||||||||||||    
T  54701357 attaattacactgacaacttttcttaaaaaatgtgaaaaatgtaaaggagacttacatacaggaacggagggagtatt 54701434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 50782819 - 50782774
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  50782819 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 50782774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 754502 - 754542
Alignment:
Q  39 taacaacttttcttaataaatgtgaaaaaagcaaagggggt 79  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  754502 taacaacttttcttaaaaaatgtgaaaaaagcaaaaggggt 754542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 5416930 - 5416983
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    |||||||||||||  ||||| ||||||||||||||| |||||||||| ||||||||    
T  5416930 aatagacacatta--tacacaaacaacttttcttaagaaatgtgaaagaagcaaag 5416983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 19654472 - 19654424
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||||||||| ||||||||||  ||||||||| ||||||||||||    
T  19654472 aatagacacattaattacactaacagtttttcttaagaaatgtgaaaaa 19654424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 20185723 - 20185802
Alignment:
Q  25 cacattaactacactaacaacttttcttaataaatgtgaaaaaa-gcaaaggggg--tacatataggaacggagggagta 101  Q
    |||||||| ||||||||||| ||||||||| ||||||||||||| | |||||| |  |||||||||| ||| ||||||||    
T  20185723 cacattaattacactaacaaattttcttaagaaatgtgaaaaaatgtaaagggagtttacatatagggacgtagggagta 20185802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 32866542 - 32866463
Alignment:
Q  25 cacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggg--gtacatataggaacggagggagtat 102  Q
    |||||||| |||||  |||||||||||||| |||||||| ||| |||||||||   |||||||||||||| | |||||||    
T  32866542 cacattaattacaccgacaacttttcttaagaaatgtgagaaatgcaaaggggacttacatataggaacgaaaggagtat 32866463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 722416 - 722377
Alignment:
Q  39 taacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  722416 taacaacttttcttaaaaaatgtgaaaaaagcaaaagggg 722377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 56217102 - 56217137
Alignment:
Q  37 actaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    |||||||||||||||||| |||||||||||||||||    
T  56217102 actaacaacttttcttaaaaaatgtgaaaaaagcaa 56217137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 22750910 - 22750987
Alignment:
Q  26 acattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagta 101  Q
    ||||||| |||||  |||||||||||||| |||||||||||| |||||| |||  |||||  ||| ||||||||||||    
T  22750910 acattaattacacagacaacttttcttaagaaatgtgaaaaatgcaaagagggattacattaagggacggagggagta 22750987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 3094226 - 3094177
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    |||||||||||||| |||  |||||||||||||||| |||||| ||||||    
T  3094226 aatagacacattaattactttaacaacttttcttaagaaatgtcaaaaaa 3094177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 5536538 - 5536493
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||| |||| ||||||||| ||||||||||||    
T  5536538 agacacattaattacactgacaatttttcttaagaaatgtgaaaaa 5536493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 37625186 - 37625235
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    |||| ||||||||| || ||| |||||||||||||| |||||||||||||    
T  37625186 aataaacacattaattatactgacaacttttcttaagaaatgtgaaaaaa 37625235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 39237657 - 39237698
Alignment:
Q  26 acattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||| |||||| |||||||||||||| ||||||||||||    
T  39237657 acattaattacactgacaacttttcttaaaaaatgtgaaaaa 39237698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 46729346 - 46729302
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  46729346 agacacattaattacactgacaacttttcttaa-aaatgtgaaaaa 46729302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 48472556 - 48472605
Alignment:
Q  19 aatagacacattaactacactaacaacttttctt-aataaatgtgaaaaa 67  Q
    |||||||||||||| |||||| |||||||||||| || ||||||||||||    
T  48472556 aatagacacattaattacactgacaacttttcttaaaaaaatgtgaaaaa 48472605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 426
Target Start/End: Complemental strand, 48952342 - 48952213
Alignment:
Q  297 tacttcataccttacttagcacctggccacatgatccctctatgcgacatagcaactctctttgccttacgccgtcaaaatgtcaccatcataaccacac 396  Q
    |||||||| || ||||||||| | || |||||||||||| |||| ||||||||  |||||||||| | |||  ||||   ||| || ||||||||||| |    
T  48952342 tacttcattccatacttagcagcagggcacatgatccctttatgtgacatagcttctctctttgcttcacgtggtcactttgttacaatcataaccactc 48952243  T
Q  397 cctccaatgctcaaatccttggcaaatcta 426  Q
      || |||||| ||||||||  ||||||||    
T  48952242 attcaaatgctaaaatccttcccaaatcta 48952213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 51787812 - 51787767
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||  |||||||||||||| ||||||||||||    
T  51787812 agacacattaattacaccgacaacttttcttaagaaatgtgaaaaa 51787767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 5932925 - 5932882
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    ||||||||| |||||| |||||||||||||| |||||||||||||    
T  5932925 acacattaattacactgacaacttttcttaa-aaatgtgaaaaaa 5932882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 33246558 - 33246606
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||  |||| ||||||||||||||||||||| ||||||| ||||    
T  33246558 aatagacattttaattacactaacaacttttcttaaaaaatgtggaaaa 33246606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 41920099 - 41920147
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||| | ||||| | ||||||||||||||||||| ||||||||||||    
T  41920099 aatagaaatattaattgcactaacaacttttcttaagaaatgtgaaaaa 41920147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 585 - 625
Target Start/End: Complemental strand, 48952063 - 48952023
Alignment:
Q  585 ttcgtggagcagcacccaccagattgcatcgtcgctgattt 625  Q
    |||||||||||||||||||| ||||||||||| || |||||    
T  48952063 ttcgtggagcagcacccacctgattgcatcgtggcggattt 48952023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 56373405 - 56373453
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||| ||||||||| | ||||||||| ||||||||| ||||||||||||    
T  56373405 aataaacacattaattgcactaacaatttttcttaagaaatgtgaaaaa 56373453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 236; Significance: 1e-130; HSPs: 3)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 257 - 700
Target Start/End: Original strand, 5536 - 5979
Alignment:
Q  257 gatgaatacggaagaaggagaagagaaaccacttaatatatacttcataccttacttagcacctggccacatgatccctctatgcgacatagcaactctc 356  Q
    |||| ||| ||||||||||||||||||| |||||| ||| |||||||||||||||||||| ||||| || ||||||||| |||| ||||||||||| |||    
T  5536 gatggatatggaagaaggagaagagaaagcacttactatctacttcataccttacttagctcctggtcatatgatccctttatgtgacatagcaacactc 5635  T
Q  357 tttgccttacgccgtcaaaatgtcaccatcataaccacaccctccaatgctcaaatccttggcaaatctattcctttaaaccaacaccttcgtattcaca 456  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  5636 tttgccttacgccgtcaaaaagttaccatcataaccacaccctccaatgctcaaatccttggcaaatccatccctttaaaccaacacctccgtattcaca 5735  T
Q  457 ctgttccatttccttcacaagcagtaggcctccccgatggtgtcgaacccctcttcaccaccaccgacctcgacaacctcaccaaaatctatcgagcagc 556  Q
    | |||||||||||||| || | ||| |||||||| ||||| ||||||  ||||| | || ||||||||||||| || ||   ||| |||| || |||  |    
T  5736 ccgttccatttccttcccatgaagttggcctccctgatggcgtcgaaagcctctccgccgccaccgacctcgagaatcttcgcaagatctttcaagccac 5835  T
Q  557 cactctactccgaccaaccatccaacacttcgtggagcagcacccaccagattgcatcgtcgctgatttcatgtatccttgggttcatgaacttgcaaac 656  Q
    |||||| |||| |||| ||||||||||||||||||||||||||||||| |||||||| || || |||||| ||| |||||||||| ||||||||||||||    
T  5836 cactctcctccaaccacccatccaacacttcgtggagcagcacccaccggattgcattgtggcggatttcttgtttccttgggttgatgaacttgcaaac 5935  T
Q  657 aagctacaaattcctagacttgctttcaacggtttctctctgtt 700  Q
    ||||| ||||||||||||||   |||||||||||||||||||||    
T  5936 aagcttcaaattcctagactcagtttcaacggtttctctctgtt 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 274 - 700
Target Start/End: Original strand, 9553 - 9963
Alignment:
Q  274 gagaagagaaaccacttaatatatacttcataccttacttagcacctggccacatgatccctctatgcgacatagcaactctctttgccttacgccgtca 373  Q
    ||||||||||| ||||||| || |||||||||||||||||| ||||||| || |||||||||||||||||||||                ||||| ||||    
T  9553 gagaagagaaagcacttaaaatctacttcataccttacttatcacctggtcatatgatccctctatgcgacata----------------tacgctgtca 9636  T
Q  374 aaatgtcaccatcataaccacaccctccaatgctcaaatccttggcaaatctattcctttaaaccaacaccttcgtattcacactgttccatttccttca 473  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||     
T  9637 aaatgttaccatcataaccacaccttccaacgctcaaatccttggcaaatctatccctttaaaccaacatctccgtattcacactgttccatttccttcc 9736  T
Q  474 caagcagtaggcctccccgatggtgtcgaacccctcttcaccaccaccgacctcgacaacctcaccaaaatctatcgagcagccactctactccgaccaa 573  Q
    |||| ||||||||||||||| ||||| |||   ||||   || |||| ||| || | ||| |   |||||||| || |||  ||||||| |||||||||     
T  9737 caagaagtaggcctccccgacggtgtagaaagtctctctgccgccactgacttcaataacatggtcaaaatctttcaagctaccactctcctccgaccac 9836  T
Q  574 ccatccaacacttcgtggagcagcacccaccagattgcatcgtcgctgatttcatgtatccttgggttcatgaacttgcaaacaagctacaaattcctag 673  Q
    ||||||||||||||||||||||||||||||| |||||||||||  | |||||  ||| |||||||||| ||||||||||||||||||| |||||||| ||    
T  9837 ccatccaacacttcgtggagcagcacccaccggattgcatcgtgacagattttttgtttccttgggttgatgaacttgcaaacaagcttcaaattccaag 9936  T
Q  674 acttgctttcaacggtttctctctgtt 700  Q
    |||  ||||||||||||||||||||||    
T  9937 actctctttcaacggtttctctctgtt 9963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 585 - 694
Target Start/End: Original strand, 812 - 921
Alignment:
Q  585 ttcgtggagcagcacccaccagattgcatcgtcgctgatttcatgtatccttgggttcatgaacttgcaaacaagctacaaattcctagacttgctttca 684  Q
    |||||||| ||| | ||||| ||||||||||| || |||||  | |  ||||||||  |||| || ||||||||||| || ||||| ||| |||| ||||    
T  812 ttcgtggaacaggaaccacctgattgcatcgtagcggattttttattcccttgggtggatgagctggcaaacaagcttcacattccgagatttgccttca 911  T
Q  685 acggtttctc 694  Q
    ||||||||||    
T  912 acggtttctc 921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 9e-32; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 43980645 - 43980727
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggggtacatataggaacggagggagta 101  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||    
T  43980645 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagaaaagggggtacatatagggacggagggagta 43980727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 24962427 - 24962510
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg-ggtacatataggaacggagggagta 101  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   |||||||||| ||||||||||||    
T  24962427 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagggaattacatatagggacggagggagta 24962510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 26878790 - 26878875
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    |||||||||||||| |||| |||||||||||||||| |||||||||||| ||||||||||  |||||||||  |||||||||||||    
T  26878790 aatagacacattaattacattaacaacttttcttaagaaatgtgaaaaaggcaaagggggtttacatatagagacggagggagtat 26878875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 24276616 - 24276704
Alignment:
Q  18 caatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtatta 104  Q
    ||||||||||||||| || ||||||||||||| |||| |||||||||||| |||||| |||  |||||||||| |||||||||||||||    
T  24276616 caatagacacattaattatactaacaactttttttaagaaatgtgaaaaaggcaaagagggtttacatatagggacggagggagtatta 24276704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 22590419 - 22590359
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggggt 79  Q
    |||||||||||||| | ||||||||| ||||||||| ||||||||||||||||||||||||    
T  22590419 aatagacacattaattgcactaacaaattttcttaagaaatgtgaaaaaagcaaagggggt 22590359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 31746467 - 31746551
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa--agggggtacatataggaacggagggagta 101  Q
    |||||||||||||| | ||||||||| ||||||||| |||||||||||||||||  ||||| |||||||| | ||| ||||||||    
T  31746467 aatagacacattaattgcactaacaatttttcttaagaaatgtgaaaaaagcaaagaggggttacatataaggacgaagggagta 31746551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 14577714 - 14577762
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  14577714 aatagacacattaattacactaacaacttttcttaagaaatgtgaaaaa 14577762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 34882714 - 34882628
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtatt 103  Q
    |||||||||||||| | || |||||| ||||||||| |||||||||||||  ||| ||||  || ||||||||||||||||||||||    
T  34882714 aatagacacattaattgcattaacaatttttcttaaaaaatgtgaaaaaaataaaaggggattatatataggaacggagggagtatt 34882628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 16644098 - 16644151
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||||||| ||||    
T  16644098 aatatacacattaattacactaacaacttttcttaagaaatgtgaaaaatgcaa 16644151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 885491 - 885451
Alignment:
Q  34 tacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  885491 tacactgacaacttttcttaataaatgtgaaaaaagcaaag 885451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 7172263 - 7172203
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggggt 79  Q
    |||||||||||||| ||||| || || ||||||||| |||||||||||||||||| |||||    
T  7172263 aatagacacattaattacaccaaaaagttttcttaagaaatgtgaaaaaagcaaaaggggt 7172203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 40602106 - 40602162
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    ||||||||||| | |||||| ||||||||| || |||||||||||||||||||||||    
T  40602106 agacacattaattgcactaataacttttctgaaaaaatgtgaaaaaagcaaaggggg 40602162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 2562795 - 2562849
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg 76  Q
    ||||||||||| |||||| |||  ||||||||| |||||||||||||||||||||    
T  2562795 agacacattaattacactgacagtttttcttaagaaatgtgaaaaaagcaaaggg 2562849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 15702298 - 15702248
Alignment:
Q  23 gacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    |||||||||||||||||| |||||||||||||| |  ||||||||||||||    
T  15702298 gacacattaactacactaccaacttttcttaattagagtgaaaaaagcaaa 15702248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 40790830 - 40790749
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagta 101  Q
    |||| |||||| |||||| |||||||||||||| |||||||||||||  ||||||||  |||||  ||| ||||||||||||    
T  40790830 agacgcattaattacactgacaacttttcttaagaaatgtgaaaaaaataaagggggtttacattaagggacggagggagta 40790749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 37956162 - 37956117
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  37956162 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 37956117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 25198328 - 25198280
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||| |||||| |||||||||||||| |||||||||||| ||||    
T  25198328 acacattaattacactgacaacttttcttaagaaatgtgaaaaaggcaa 25198280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 25888639 - 25888591
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||| ||||| ||||||||||||||||||||| |||||| |||||    
T  25888639 aatagacatattaattacactaacaacttttcttaagaaatgtaaaaaa 25888591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 14522671 - 14522714
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||    
T  14522671 acacattaattacactaacaatttttcttaagaaatgtgaaaaa 14522714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 40517765 - 40517699
Alignment:
Q  41 acaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtattat 105  Q
    |||||||||||||| |||||||||||| |||||| |||  |||||||| | ||| ||||||||||||    
T  40517765 acaacttttcttaaaaaatgtgaaaaatgcaaagagggcttacatataaggacgaagggagtattat 40517699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 57253 - 57299
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    ||||||||||| |||||  |||||||||||||| |||||||||||||    
T  57253 agacacattaattacaccgacaacttttcttaagaaatgtgaaaaaa 57299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 14846986 - 14847032
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    ||||||||||| |||||  |||||||||||||| |||||||||||||    
T  14846986 agacacattaattacaccgacaacttttcttaaaaaatgtgaaaaaa 14847032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 14906645 - 14906559
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaag-caaagggggtacatataggaacggagggagtatta 104  Q
    |||||||| ||||| |||| ||| ||||||| | || ||||||||||||||  ||||||| || ||| ||| |||||||||||||||    
T  14906645 aatagacatattaattacattaataacttttatgaaaaaatgtgaaaaaagtaaaaggggttatatagagggacggagggagtatta 14906559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 25185071 - 25185021
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||  |||||| |||||||||||||| |||||||||||| ||||    
T  25185071 agacacattagttacactgacaacttttcttaagaaatgtgaaaaaggcaa 25185021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 10396297 - 10396338
Alignment:
Q  26 acattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||| |||| | |||||||||||||||||||||||||||    
T  10396297 acattaattacattgacaacttttcttaataaatgtgaaaaa 10396338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 17933748 - 17933661
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtattat 105  Q
    |||||||||||||| ||||   |||| ||||||||  ||||||||||||| |||||||||  |||||| | ||||||| ||||||||||    
T  17933748 aatagacacattaattacatcgacaatttttcttacgaaatgtgaaaaaa-caaagggggcttacatacaagaacggatggagtattat 17933661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 24512232 - 24512277
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||| |||| ||||||||| ||||||||||||    
T  24512232 agacacattaattacactgacaaattttcttaaaaaatgtgaaaaa 24512277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 38761423 - 38761468
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||| ||||||||| ||||||||| |||||||    
T  38761423 agacacattaattacactgacaactttttttaataaatatgaaaaa 38761468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 16002789 - 16002833
Alignment:
Q  23 gacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||||| |||||  |||||||||||||| ||||||||||||    
T  16002789 gacacattaattacacagacaacttttcttaaaaaatgtgaaaaa 16002833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 19838975 - 19838890
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||| |||||||||||||    
T  19838975 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagggggattacatatagggacggagggagtat 19838890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 22410908 - 22410988
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggg-gtacatataggaacggagggagta 101  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||  |||||||| | | ||||||||||    
T  22410908 agacacattaattacactaacaacttttcttaagaaatgtgaaaaaagtaaaggggtttacatataaggatggagggagta 22410988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 15981835 - 15981754
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagta 101  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||||  ||||||| |  | |||||||||||||||||||||    
T  15981835 agacacattaattacaccaacaacttttcttaagaaatgtgaaaaatacaaagggagcttgcatataggaacggagggagta 15981754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 31945974 - 31946030
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagg 75  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||| |||||    
T  31945974 aatagacacattaattacactaacaaattttcttaagaaatgtgaaaaaaggaaagg 31946030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 1763854 - 1763803
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    ||||||||||| |||||| |||||||||||||| |||| |||||||||||||    
T  1763854 agacacattaattacactgacaacttttcttaagaaatatgaaaaaagcaaa 1763803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 3888004 - 3888051
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaa 66  Q
    |||||||||||||||| || |||||||||||||||| |||||||||||    
T  3888004 aatagacacattaactgcaataacaacttttcttaagaaatgtgaaaa 3888051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 16327164 - 16327083
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagta 101  Q
    ||||||||||| || | | |||||||||||||| ||||||||||||  |||||| ||  |||||||||||||| ||||||||    
T  16327164 agacacattaattatattgacaacttttcttaagaaatgtgaaaaatacaaaggaggcttacatataggaacgcagggagta 16327083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 16350562 - 16350481
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagta 101  Q
    |||| |||||| |||||| ||||||||| |||| ||||||||||||  |||||| ||  |||||||||||||| ||||||||    
T  16350562 agactcattaattacactgacaacttttattaaaaaatgtgaaaaatacaaaggaggcttacatataggaacgcagggagta 16350481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 5895772 - 5895727
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||| |||||||||||||||| ||||||||||||    
T  5895772 agacacattaattacattaacaacttttcttaagaaatgtgaaaaa 5895727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 11302896 - 11302851
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| || |||||||||||||||||| ||||||||||||    
T  11302896 agacacattaattatactaacaacttttcttaagaaatgtgaaaaa 11302851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 27441819 - 27441763
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    ||||||||||||| |||  ||||| ||||||||||||||||||||| |||| |||||    
T  27441819 agacacattaactgcacagacaacatttcttaataaatgtgaaaaatgcaatggggg 27441763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 28238376 - 28238431
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    |||||||||||||| || |||||||| |||| |||| |||||||||| ||||||||    
T  28238376 aatagacacattaattatactaacaatttttattaagaaatgtgaaagaagcaaag 28238431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 5084612 - 5084650
Alignment:
Q  28 attaactacactaacaacttttcttaataaatgtgaaaa 66  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  5084612 attaattacactaacaacttttcttaagaaatgtgaaaa 5084650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 6791417 - 6791363
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    ||||||||| |||| | ||||||||| |||| |||||||||||||||||| ||||    
T  6791417 acacattaattacattgacaactttttttaagaaatgtgaaaaaagcaaaagggg 6791363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 3729433 - 3729384
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    |||||||||||||| ||||| ||||| ||||||||| |||||| ||||||    
T  3729433 aatagacacattaattacaccaacaatttttcttaagaaatgtaaaaaaa 3729384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 5604539 - 5604588
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    ||||||||||||||||||| |||||| ||| |||||||||  ||||||||    
T  5604539 aatagacacattaactacattaacaaatttacttaataaaaatgaaaaaa 5604588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 16186614 - 16186569
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||||| |||||||||||  ||||||||||||    
T  16186614 agacacattaattacactaataacttttcttacaaaatgtgaaaaa 16186569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 11081940 - 11081892
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||| | ||||| ||||||||||||||||||||| | ||||||||||    
T  11081940 aatagatatattaattacactaacaacttttcttaagatatgtgaaaaa 11081892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 12514647 - 12514695
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||||||||| | ||||||||| ||||||||| | ||||||||||    
T  12514647 aatagacacattaattgcactaacaatttttcttaaaatatgtgaaaaa 12514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 31536056 - 31536008
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||| | ||||| ||||||||||||||||||||| |||||| |||||    
T  31536056 aatagatatattaattacactaacaacttttcttaagaaatgtaaaaaa 31536008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 39690546 - 39690631
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||| |||||||||||||    
T  39690546 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaaggggggttacatatagggacggagggagtat 39690631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 21912164 - 21912081
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggg-gtacatataggaacggagggagta 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||| ||||||||||||    
T  21912164 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggcttatatatagggacggagggagta 21912081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 27642546 - 27642467
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg-tacatataggaacggaggg 97  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||    
T  27642546 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaagggggttacatatagggacggaggg 27642467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 38972186 - 38972271
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa--gggggtacatataggaacggagggagtat 102  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| | |||  | |  |||||||||| |||||||||||||    
T  38972186 aatagacacattaattacactaacaacttttcttaagaaatgtgaaaaatgtaaaatgtgtttacatatagggacggagggagtat 38972271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 43060570 - 43060626
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagg 75  Q
    |||||||||||||| |||||||||||||||| |||| ||||||||||||| ||||||    
T  43060570 aatagacacattaattacactaacaacttttattaaaaaatgtgaaaaaaacaaagg 43060626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 30348137 - 30348192
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    |||||||||||||| || | |||||||||||||| | |||||||||||||||||||    
T  30348137 aatagacacattaagtaaattaacaacttttcttcagaaatgtgaaaaaagcaaag 30348192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 3559087 - 3559172
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggg-gtacatataggaacggagggagtatta 104  Q
    |||||||||||||| || || ||||| ||||||||| |||||||||||||  |||||||  ||||| |||| |||||||||||||||    
T  3559087 aatagacacattaattataccaacaatttttcttaagaaatgtgaaaaaacaaaaggggtttacatttagg-acggagggagtatta 3559172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 4378178 - 4378132
Alignment:
Q  27 cattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||    
T  4378178 cattaattacactaacaactttttttaagaaatgtgaaaaaagcaaa 4378132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 7510645 - 7510591
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||  |||||||||    
T  7510645 acacattaattacactaataacttttcttaaaaaatgtgaaaaatacaaaggggg 7510591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 14044558 - 14044608
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaag 69  Q
    |||||||| ||||||| || |||||||||||||||| ||||||||||||||    
T  14044558 aatagacatattaactgcattaacaacttttcttaagaaatgtgaaaaaag 14044608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 15898526 - 15898606
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagta 101  Q
    ||||||||||| |||||| |||||||||||||| ||| ||| |||| ||||||||||  |||||||| | ||||||||||||    
T  15898526 agacacattaattacactgacaacttttcttaagaaaagtg-aaaatgcaaagggggtttacatatatggacggagggagta 15898606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 25690754 - 25690808
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    ||||||||| |||||  |||||||||||||| ||||||||| |||||||||||||    
T  25690754 acacattaattacaccgacaacttttcttaagaaatgtgaacaaagcaaaggggg 25690808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 27587879 - 27587825
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg 76  Q
    ||||||||||| || ||| |||||||||||||| |||||||||||||| ||||||    
T  27587879 agacacattaattatactgacaacttttcttaagaaatgtgaaaaaagtaaaggg 27587825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 10523337 - 10523418
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa-agggggtacatataggaacggagggagtat 102  Q
    ||||||||||| |||||| | |||||||||||| |||| |||||||||||| ||||  |||||| | | |||||||||||||    
T  10523337 agacacattaattacactgataacttttcttaaaaaatatgaaaaaagcaagagggcttacataaaaggacggagggagtat 10523418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 4857567 - 4857611
Alignment:
Q  28 attaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||| |||||||||||||||| |||| |||||||||||||||||    
T  4857567 attaattacactaacaacttttattaagaaatgtgaaaaaagcaa 4857611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 11980760 - 11980712
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||||||||| |||||||||||||||| |||| |||| |||||||    
T  11980760 aatagacacattaattacactaacaacttttattaaaaaatatgaaaaa 11980712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 20976353 - 20976409
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    ||||||||||| |||||| |||| ||||||||| |||| ||||||||| ||||||||    
T  20976353 agacacattaattacactgacaaattttcttaagaaatatgaaaaaagtaaaggggg 20976409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 21574940 - 21574988
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||||||||| |||||||| ||| |||||||| ||||||||||||    
T  21574940 aatagacacattaagtacactaaaaacatttcttaagaaatgtgaaaaa 21574988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 31742786 - 31742730
Alignment:
Q  147 gacattaaaagcaatagcagaaacaattaattagtacaatacctctctcatcatcac 203  Q
    |||| ||||||||||||| |||| ||||||||  ||||||| |||||||||||||||    
T  31742786 gacactaaaagcaatagcggaaataattaattgctacaataactctctcatcatcac 31742730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 35569068 - 35569122
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg 76  Q
    ||||||||||| |||||| | |||||||||||| |||||||||||| | ||||||    
T  35569068 agacacattaattacactgataacttttcttaagaaatgtgaaaaatgtaaaggg 35569122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 18729632 - 18729583
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    |||||||||||||| ||||| || || ||||||||| |||||||||||||    
T  18729632 aatagacacattaattacacaaataatttttcttaagaaatgtgaaaaaa 18729583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 29866230 - 29866185
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||| ||||| | ||||||||||||||||||| ||||||||||||    
T  29866230 agacatattaattgcactaacaacttttcttaagaaatgtgaaaaa 29866185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 32067872 - 32067781
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaag--caaagggggtacatataggaacggagggagtattatttt 108  Q
    ||||||||||| || | ||||||| | ||||||||| |||||| |||||||  |||||||  |||||||||  ||||||| ||||| |||||    
T  32067872 aatagacacatgaattgcactaactatttttcttaagaaatgtaaaaaaagtacaaagggcttacatatagagacggaggaagtatgatttt 32067781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 36177336 - 36177288
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||||||||| |||||| | |||||||||||| |||||| |||||    
T  36177336 aatagacacattaattacactgataacttttcttaagaaatgtaaaaaa 36177288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 2e-29; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 15512841 - 15512926
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||| |||||||||||||    
T  15512841 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaaggggggttacatatagggacggagggagtat 15512926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 28949024 - 28949109
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||| |||||||||||||    
T  28949024 aatagacacattaactacactaacaacttttcttaagaaatgtgaaaaaagcaaaggggggttacatatagggacggagggagtat 28949109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 31305361 - 31305277
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagta 101  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||||    
T  31305361 aatagacacattaattacaccaacaacttttcttaataaatgtgaaaaaagcaaaaggggtttacatatagggacggagggagta 31305277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 44335329 - 44335248
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    ||||||||||| |||||| ||||||||| |||| ||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  44335329 agacacattaattacactgacaacttttattaagaaatgtgaaaaaa-caaagggggtttacatataggaacggagggagtat 44335248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 23982655 - 23982738
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggg--gtacatataggaacggagggagtatt 103  Q
    ||||||||||| |||| | |||||||||||||| |||||||||||| |||||||||   |||||||||| ||||||||||||||    
T  23982655 agacacattaattacattgacaacttttcttaagaaatgtgaaaaatgcaaaggggacttacatatagggacggagggagtatt 23982738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 2342947 - 2342889
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggg 77  Q
    |||||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||    
T  2342947 aatagacacattaagtaaactaacaatttttcttaaaaaatgtgaaaaaagcaaagggg 2342889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 38680518 - 38680468
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaag 69  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  38680518 aatagacacattaattacactaacaacttttcttaagaaatgtgaaaaaag 38680468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 4813522 - 4813606
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa--gggggtacatataggaacggagggagta 101  Q
    |||||||||||||| | || |||||||||||||||| ||||||||||||||||||  |||| || ||||||| ||| ||||||||    
T  4813522 aatagacacattaattgcattaacaacttttcttaagaaatgtgaaaaaagcaaaagggggttatatatagggacgaagggagta 4813606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 13723538 - 13723595
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg 76  Q
    |||||||||||||| | ||||||||||||||||||| |||||||||||| ||||||||    
T  13723538 aatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaatgcaaaggg 13723595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 15179453 - 15179369
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagta 101  Q
    |||||||||||||| |||||| |||| ||||||||| |||||||||||||||||| ||||  |||||||||| |||  |||||||    
T  15179453 aatagacacattaattacactgacaatttttcttaagaaatgtgaaaaaagcaaatggggtttacatatagggacgatgggagta 15179369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 103
Target Start/End: Original strand, 8984724 - 8984807
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtatt 103  Q
    ||||||||||| ||||||||||| ||| ||||| |||||||||||| ||||||| ||  |||||||||| || |||||||||||    
T  8984724 agacacattaattacactaacaattttccttaaaaaatgtgaaaaatgcaaaggaggcttacatatagggacagagggagtatt 8984807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 51996989 - 51996912
Alignment:
Q  28 attaactacactaacaacttttcttaataaat-gtgaaaaaagcaaagggggt--acatataggaacggagggagtat 102  Q
    ||||| |||||| |||||||||||||| |||| ||||||| ||||||||||||  ||||||||| |||||||||||||    
T  51996989 attaattacactgacaacttttcttaagaaattgtgaaaatagcaaagggggtttacatatagggacggagggagtat 51996912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 30336102 - 30336049
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    |||||||||||||| |||||  |||||||||||||| |||||||||||||||||    
T  30336102 aatagacacattaattacaccgacaacttttcttaagaaatgtgaaaaaagcaa 30336049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 32047480 - 32047432
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  32047480 acacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaa 32047432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 15911612 - 15911655
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtg 62  Q
    |||||||||||||| ||||||||||||||||||||| |||||||    
T  15911612 aatagacacattaagtacactaacaacttttcttaagaaatgtg 15911655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 27531137 - 27531055
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg--ggtacatataggaacggagggagtatta 104  Q
    ||||||||| || ||| |||||||||||||| |||||||||||| ||||||||    |||||| ||| |||||||||||||||    
T  27531137 acacattaattatactgacaacttttcttaagaaatgtgaaaaatgcaaagggaacttacatacagggacggagggagtatta 27531055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 28723713 - 28723756
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtg 62  Q
    |||||||||||||| ||||||||||||||||||||| |||||||    
T  28723713 aatagacacattaattacactaacaacttttcttaaaaaatgtg 28723756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 30898626 - 30898677
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    ||||||||||| |||||| |||| ||||||||| ||||||||||||||||||    
T  30898626 agacacattaattacactgacaatttttcttaagaaatgtgaaaaaagcaaa 30898677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 3143443 - 3143393
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||| |||| | |||||||||||||| |||||||||||||||||    
T  3143443 agacacattaattacaatgacaacttttcttaagaaatgtgaaaaaagcaa 3143393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 5085152 - 5085202
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||| ||||    
T  5085152 agacacattaattacactgacaacttttcttaaaaaatgtgaaaaaggcaa 5085202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 10842372 - 10842287
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa--gggggtacatataggaacggagggagtat 102  Q
    |||||||| ||||| | || |||||||||||||||| |||||||||||||| |||  |||| || ||||||| ||| |||||||||    
T  10842372 aatagacatattaattgcattaacaacttttcttaagaaatgtgaaaaaagtaaaagggggttatatatagggacgaagggagtat 10842287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 16582573 - 16582528
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  16582573 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 16582528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 28334278 - 28334323
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  28334278 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 28334323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 52141245 - 52141321
Alignment:
Q  27 cattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa--gggggtacatataggaacggagggagta 101  Q
    |||||| |||||||| || ||||||||| ||||||||||||||||||  | || |||||||||| ||||| ||||||    
T  52141245 cattaattacactaataatttttcttaaaaaatgtgaaaaaagcaaatggaggttacatatagggacggatggagta 52141321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 20564816 - 20564764
Alignment:
Q  21 tagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    |||||||||||  ||||||| ||||||||||||| |||||||||||| |||||    
T  20564816 tagacacattagttacactatcaacttttcttaacaaatgtgaaaaatgcaaa 20564764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 25258373 - 25258325
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||||||||| | ||||||||||||||||||| |||| |||||||    
T  25258373 aatagacacattaattgcactaacaacttttcttaaaaaatatgaaaaa 25258325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 32152201 - 32152153
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||||||||| | ||| ||||||||||||||| ||||||||||||    
T  32152201 aatagacacattaattgcaccaacaacttttcttaagaaatgtgaaaaa 32152153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 47643580 - 47643529
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg 76  Q
    ||||||||| |||||| |||||||||||||| |||||||| ||||||||||||    
T  47643580 acacattaattacactgacaacttttcttaagaaatgtga-aaaagcaaaggg 47643529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 50692452 - 50692369
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagt 100  Q
    |||||||||||||| | || | |||||||||||||| |||||||||||  ||||||||||  || ||||||| || ||||||||    
T  50692452 aatagacacattaattgcattgacaacttttcttaagaaatgtgaaaagggcaaagggggcttatatatagggactgagggagt 50692369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 31808032 - 31808079
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaa 66  Q
    |||||||||||||| |||||||||||||||||| || || ||||||||    
T  31808032 aatagacacattaattacactaacaacttttctcaagaagtgtgaaaa 31808079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 48721931 - 48721978
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaag 69  Q
    ||||||||||| |||||| ||| |||||||||| ||||||||||||||    
T  48721931 agacacattaattacactgacagcttttcttaagaaatgtgaaaaaag 48721978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 4817969 - 4818023
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    ||||| ||| |||||  |||||||||||||| ||||||||||||| |||||||||    
T  4817969 acacaataattacaccgacaacttttcttaagaaatgtgaaaaaaacaaaggggg 4818023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 4829769 - 4829823
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    ||||| ||| |||||  |||||||||||||| ||||||||||||| |||||||||    
T  4829769 acacaataattacaccgacaacttttcttaagaaatgtgaaaaaaacaaaggggg 4829823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 10160759 - 10160709
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||| |||||| | |||||||||||| |||||||||||| ||||    
T  10160759 agacacattaattacactgataacttttcttaagaaatgtgaaaaaggcaa 10160709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 32144354 - 32144300
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    |||||||||||||| | ||| ||||||||||||||| |||||| ||||| |||||    
T  32144354 aatagacacattaaatgcaccaacaacttttcttaagaaatgtaaaaaatgcaaa 32144300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 33231880 - 33231830
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||| |||||| ||||||||| |||| |||||||||||| ||||    
T  33231880 agacacattaattacactgacaactttttttaagaaatgtgaaaaaggcaa 33231830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 23393572 - 23393621
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    |||||| ||||||| |||| |||||||||||||||| |||| ||||||||    
T  23393572 aatagatacattaattacattaacaacttttcttaaaaaatatgaaaaaa 23393621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 25269417 - 25269372
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||  |||||| |||||||||||||| ||||||||||||    
T  25269417 agacacattatttacactgacaacttttcttaaaaaatgtgaaaaa 25269372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 34696946 - 34696991
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||| ||||| |||||| |||||||||||||| ||||||||||||    
T  34696946 agacatattaattacactgacaacttttcttaaaaaatgtgaaaaa 34696991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 35001345 - 35001378
Alignment:
Q  34 tacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||| |||||||||||||||||||||||||||    
T  35001345 tacactgacaacttttcttaataaatgtgaaaaa 35001378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 3143794 - 3143842
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||||||||| ||||||| ||||||||||||| | || |||||||    
T  3143794 aatagacacattaattacactatcaacttttcttaagacatatgaaaaa 3143842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 46495349 - 46495270
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggag 99  Q
    ||||||||||| |||||| |||| |||| || | ||||||||||||| |||||| ||  |||||||| | ||||||||||    
T  46495349 agacacattaattacactgacaatttttttttaaaaatgtgaaaaaaacaaaggaggtttacatatatggacggagggag 46495270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 5e-24; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 17663668 - 17663584
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagta 101  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||    
T  17663668 aataggcacattaattacactaacaacttttcttaagaaatgtgaaaaaagcaaaggggggttacatatagggacggagggagta 17663584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 20362027 - 20361946
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggggtacatataggaacggagggagta 101  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||| | ||| || ||||||| ||||||||||||    
T  20362027 aatagacacattaactacactaacaatttttcttaagaaatgtgaaaaaagcaga-gggttatatatagggacggagggagta 20361946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 45214766 - 45214685
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagta 101  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||| ||||||||||  ||||||| || ||||||||||||    
T  45214766 agacacattaattacactgacaacttttcttaagaaatgtgaaaaatgcaaagggggcttacatatcgggacggagggagta 45214685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 3645367 - 3645312
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    |||||||||||||| || |||||||||||||||||| |||||||||||||||||||    
T  3645367 aatagacacattaagtaaactaacaacttttcttaagaaatgtgaaaaaagcaaag 3645312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 42250937 - 42250996
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    |||||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||    
T  42250937 aatagacacattaattacactaccaacttttcataagaaatgtgaaaaaagcaaaggggg 42250996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 27297618 - 27297561
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggggt 79  Q
    ||||||||||| ||||||||||  ||||||||| ||||||||||||||||||||||||    
T  27297618 agacacattaattacactaacagtttttcttaagaaatgtgaaaaaagcaaagggggt 27297561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 41865760 - 41865701
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    |||||||||||||| || || ||||||||||||||| |||||||||||||||||| ||||    
T  41865760 aatagacacattaattagaccaacaacttttcttaagaaatgtgaaaaaagcaaaagggg 41865701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 247704 - 247619
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||||| | || || |  || ||||||| |||||||||||||    
T  247704 aatagacacattaattacactaacaactttccttaaaaaatgtgaaaaaacccaatggagcttaaatatagggacggagggagtat 247619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 44424636 - 44424586
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||| ||||    
T  44424636 agacacattaattacactaacaacttttcttaagaaatgtgaaaaatgcaa 44424586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 2395846 - 2395797
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  2395846 aatagacacattaattacactaacaacttttcttaagaaatgtaaaaaaa 2395797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 4398585 - 4398633
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  4398585 aatagacacattaattacactaacaacttttcttaa-aaatgtgaaaaaa 4398633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 21012897 - 21012811
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggggtacatataggaacggagggagtattattttt 109  Q
    |||| ||||||||| | ||||||||||||||||||| |||| ||||||| ||||| ||     |||||||||||||||||||| |||||||    
T  21012897 aataaacacattaattgcactaacaacttttcttaagaaatttgaaaaatgcaaaagg----tatataggaacggagggagtactattttt 21012811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 28265017 - 28265066
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    ||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  28265017 acacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaaa 28265066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 35178859 - 35178903
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    |||||||||||||||| |||||||||||||| |||||||||||||    
T  35178859 acacattaactacactgacaacttttcttaagaaatgtgaaaaaa 35178903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 40346147 - 40346229
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtatta 104  Q
    ||||||||| | ||| ||||||||||||||| ||||||||||||| ||||| |||  |||||||||| ||| | |||||||||    
T  40346147 acacattaattgcacaaacaacttttcttaaaaaatgtgaaaaaaacaaagagggtttacatatagggacgaatggagtatta 40346229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 14420718 - 14420637
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagta 101  Q
    ||||||||||| ||||||||||||||||||| | |||  | ||||||| ||||||||  |||||||||| |||||| |||||    
T  14420718 agacacattaattacactaacaacttttctttagaaaaataaaaaaagtaaagggggcttacatatagggacggagagagta 14420637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 27749553 - 27749499
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg 76  Q
    ||||| ||||| |||||| |||||||||||||| |||||||||||||| ||||||    
T  27749553 agacatattaattacactgacaacttttcttaagaaatgtgaaaaaagtaaaggg 27749499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 38449778 - 38449859
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag--ggggtacatataggaacggagggagta 101  Q
    ||||||||||| ||||  || ||||||| |||| |||||||||||||| ||||  ||| |||||||||| ||||||||||||    
T  38449778 agacacattaattacaaaaataacttttattaagaaatgtgaaaaaagaaaaggagggttacatatagggacggagggagta 38449859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 2917158 - 2917207
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    |||||||||||||| || |||||||||||||||||| ||||||| |||||    
T  2917158 aatagacacattaattatactaacaacttttcttaagaaatgtggaaaaa 2917207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 15851572 - 15851527
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  15851572 agacacattaattacactcacaacttttcttaagaaatgtgaaaaa 15851527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 17251025 - 17251070
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| || |||||||||||||||||| ||||||||||||    
T  17251025 agacacattaattatactaacaacttttcttaaaaaatgtgaaaaa 17251070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 37355077 - 37355032
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  37355077 agacacattaattacacaaacaacttttcttaagaaatgtgaaaaa 37355032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 44421486 - 44421408
Alignment:
Q  26 acattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    ||||||| |||||| |||| ||||||||| |||||||||||||| |||||| |  |||||  ||| |||||||||||||    
T  44421486 acattaattacactgacaatttttcttaagaaatgtgaaaaaagtaaagggagtttacattaagggacggagggagtat 44421408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 4033618 - 4033568
Alignment:
Q  26 acattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg 76  Q
    ||||||| |||||||| |||||||||||| |||| | ||||||||||||||    
T  4033618 acattaattacactaataacttttcttaagaaatataaaaaaagcaaaggg 4033568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 9718236 - 9718286
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||| |||||| ||||| |||||||| |||||||||||| ||||    
T  9718236 agacacattaattacactgacaacatttcttaagaaatgtgaaaaatgcaa 9718286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 26512115 - 26512061
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    |||| ||||||||| || |||||||| |||| |||| ||||||||||||||||||    
T  26512115 aataaacacattaattatactaacaattttttttaagaaatgtgaaaaaagcaaa 26512061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 41665751 - 41665705
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    ||||||||||| |||||| ||||| |||||||| |||||||||||||    
T  41665751 agacacattaattacactgacaacatttcttaagaaatgtgaaaaaa 41665705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 24774909 - 24774860
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    |||||| ||||||| |||||||| || ||||||||| |||||||||||||    
T  24774909 aatagatacattaattacactaataaattttcttaaaaaatgtgaaaaaa 24774860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 44274731 - 44274776
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||| | |||||||||||||| ||||||||||||    
T  44274731 agacacattaattacattgacaacttttcttaaaaaatgtgaaaaa 44274776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 1829773 - 1829729
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    ||||||||| | ||||||| ||||||||||||| |||||||||||    
T  1829773 acacattaaattcactaaccacttttcttaatatatgtgaaaaaa 1829729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 32860457 - 32860505
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||| ||||| ||||||||||| ||||||||||||||||  ||||||||    
T  32860457 aataaacacactaactacactaccaacttttcttaataagagtgaaaaa 32860505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 7e-20; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 46435796 - 46435877
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagta 101  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||  ||||||| || ||||||||||||    
T  46435796 agacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaaagggggtttacatattgggacggagggagta 46435877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 14645952 - 14646006
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  14645952 aatagacacattaattacactaacaacttttcttaaaaaatgtgaaaaaagcaaa 14646006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 31531491 - 31531565
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagc--aaagggggtacatataggaacgga 94  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||||||  ||||||| |||||||||| |||||    
T  31531491 agacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaaaaaggggttacatatagggacgga 31531565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 11388164 - 11388110
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  11388164 aatagacacattaattacactaacaatttttcttaagaaatgtgaaaaaagcaaa 11388110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 20945363 - 20945448
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| | ||| || |  |||||||||| |||| ||||||||    
T  20945363 aatagacacattaattacactaacaacttttcttaagaaatgtgaaaaatgtaaaaggtgtttacatatagggacggtgggagtat 20945448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 44338116 - 44338040
Alignment:
Q  28 attaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||| ||||  |||||||||| || ||||||||||    
T  44338116 attaactacactaacaacttttcttaaaaaatgtgaaaataacaaaaggggtttacatatagggacagagggagtat 44338040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 51263122 - 51263046
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggg-gtacatataggaacggaggg 97  Q
    ||||||||||| ||||||||||| |||| |||| |||||||||||| | |||||||  |||||||||||||||||||    
T  51263122 agacacattaattacactaacaattttttttaagaaatgtgaaaaatgtaaaggggtttacatataggaacggaggg 51263046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 11344601 - 11344547
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    |||||||||||||| ||||| || |||||||||||| ||||||||||||||||||    
T  11344601 aatagacacattaattacaccaataacttttcttaagaaatgtgaaaaaagcaaa 11344547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 26517281 - 26517335
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg 76  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||| ||||||||    
T  26517281 agacacattaattacactgacaacttttcttaagaaatgtgaaaaatgcaaaggg 26517335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 11393965 - 11393916
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    |||||||||||||| |||||||||||||||| |||| |||||||||||||    
T  11393965 aatagacacattaattacactaacaactttttttaaaaaatgtgaaaaaa 11393916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 46048562 - 46048515
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaag 69  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||||    
T  46048562 agacacattaattacactgacaacttttcttaagaaatgtgaaaaaag 46048515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 52325566 - 52325621
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    |||||||||||||| ||||||||||  ||||||||| |||||||||||| ||||||    
T  52325566 aatagacacattaattacactaacattttttcttaagaaatgtgaaaaatgcaaag 52325621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 29645394 - 29645352
Alignment:
Q  26 acattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  29645394 acattaattacactaacaacatttcttaataaatgtgaaaaaa 29645352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 30476081 - 30476031
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||| ||||    
T  30476081 agacacattaattacactgacaacttttcttaaaaaatgtgaaaaaggcaa 30476031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 42010911 - 42010857
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    |||||||||||||| |||| |||||| ||||||||| ||||||||||||| ||||    
T  42010911 aatagacacattaattacattaacaaattttcttaagaaatgtgaaaaaaacaaa 42010857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 23157135 - 23157078
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggggt 79  Q
    ||||||||||| |||||| |||| ||||||||| ||||||||| ||| ||||||||||    
T  23157135 agacacattaattacactgacaatttttcttaagaaatgtgaacaaaacaaagggggt 23157078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 25750570 - 25750513
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg 76  Q
    |||||||| ||||| |||| ||||||| |||||||| |||||| ||||||||||||||    
T  25750570 aatagacaaattaattacattaacaacctttcttaagaaatgtaaaaaaagcaaaggg 25750513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 28477394 - 28477334
Alignment:
Q  45 cttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtatt 103  Q
    |||||||||| |||||||||||||| ||||||||  |||||||||| ||||||| ||||||    
T  28477394 cttttcttaagaaatgtgaaaaaagaaaagggggcttacatatagggacggaggaagtatt 28477334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 31650728 - 31650785
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg 76  Q
    |||||||||||||| | || |||||| |||| ||||||||||||||||| ||||||||    
T  31650728 aatagacacattaattgcattaacaattttttttaataaatgtgaaaaatgcaaaggg 31650785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 27638140 - 27638188
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||| ||||||| |||||||| |||||||||||| ||||||||||||    
T  27638140 aatagagacattaattacactaataacttttcttaagaaatgtgaaaaa 27638188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 37729092 - 37729176
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaa-gcaaagggggtacatataggaacggagggagtat 102  Q
    |||||||||||||| || | |||||| ||||||||| |||||||||||||   ||||| | || |||||| ||||||||||||||    
T  37729092 aatagacacattaattatattaacaatttttcttaagaaatgtgaaaaaacaaaaaggagttatatatagaaacggagggagtat 37729176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 41740036 - 41740121
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa---gggggtacatataggaacggagggagta 101  Q
    |||||||||||||| |  | ||| || ||||||||| |||||||||||||| |||   |||| || ||||||||||||||||||||    
T  41740036 aatagacacattaattgtattaataatttttcttaaaaaatgtgaaaaaagtaaaaagggggttatatataggaacggagggagta 41740121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 41825200 - 41825247
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaa 66  Q
    |||||||||||||| |||||| |||||||||||||| || ||||||||    
T  41825200 aatagacacattaattacactgacaacttttcttaagaagtgtgaaaa 41825247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 12077809 - 12077859
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||| |||||| |||||||||||||| |||| ||||||| ||||    
T  12077809 agacacattaattacactgacaacttttcttaagaaatttgaaaaatgcaa 12077859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 29676802 - 29676887
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    |||||||||||||| |||||| |||| ||||||||| |||| ||||||| |||| ||| |  |||||  ||| |||||||||||||    
T  29676802 aatagacacattaattacactgacaatttttcttaagaaatatgaaaaaggcaatgggtgcctacattaagggacggagggagtat 29676887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 33287909 - 33287859
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaag 69  Q
    |||||||| ||||| |||||||  |||||||||||| ||||||||||||||    
T  33287909 aatagacaaattaattacactacaaacttttcttaagaaatgtgaaaaaag 33287859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 41727304 - 41727354
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||| |||||| ||||||||| |||| |||||||||||| ||||    
T  41727304 agacacattaattacactgacaactttttttaagaaatgtgaaaaaggcaa 41727354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 26121370 - 26121321
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    ||||||||| |||||| |||||||||||||| |||||| ||||| |||||    
T  26121370 acacattaattacactgacaacttttcttaagaaatgtaaaaaatgcaaa 26121321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 28228217 - 28228137
Alignment:
Q  24 acacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    ||||||||| | |||||||||||||| |||| |||| | ||||||||||||| ||  || ||||||| |||||| ||||||    
T  28228217 acacattaattgcactaacaactttttttaagaaatatcaaaaaagcaaaggaggcttatatatagggacggagagagtat 28228137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 35145280 - 35145235
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||| |||| |||||| |||||||||||||| ||||||||||||    
T  35145280 agacacgttaattacactcacaacttttcttaagaaatgtgaaaaa 35145235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 41543670 - 41543719
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    |||||||||||||| |||||  ||||||||| |||| |||||||||||||    
T  41543670 aatagacacattaaatacacagacaactttttttaagaaatgtgaaaaaa 41543719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 42891459 - 42891414
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||| ||||| || |||||||||||||||||| ||||||||||||    
T  42891459 agacaaattaattatactaacaacttttcttaagaaatgtgaaaaa 42891414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 49891991 - 49891946
Alignment:
Q  21 tagacacattaactacactaacaacttttcttaataaatgtgaaaa 66  Q
    ||||||||||||  |||||| ||||||||||||||| |||||||||    
T  49891991 tagacacattaatcacactatcaacttttcttaatatatgtgaaaa 49891946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 48581361 - 48581309
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagca 71  Q
    |||| ||||||||||||||  || ||||||| |||| ||||||||||||||||    
T  48581361 aataaacacattaactacatcaataactttttttaagaaatgtgaaaaaagca 48581309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 49000495 - 49000447
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||||||||| | ||  ||||||||||||||| ||||||||||||    
T  49000495 aatagacacattaattgcatcaacaacttttcttaaaaaatgtgaaaaa 49000447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 50363067 - 50363015
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    ||||| ||||| |||||| |||| ||||||||| ||||||||||||| |||||    
T  50363067 agacatattaattacactgacaatttttcttaaaaaatgtgaaaaaaacaaag 50363015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 3e-19; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 19 - 105
Target Start/End: Complemental strand, 20124232 - 20124144
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtattat 105  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||| ||||  |||||  ||| ||||||||||||||||    
T  20124232 aatagacacattaattacaccaacaacttttcttaaaaaatgtgaaaaaagcaaaaggggcttacattaagggacggagggagtattat 20124144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 22 - 102
Target Start/End: Complemental strand, 20123491 - 20123409
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtat 102  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||||||||||| |  |||||||||| ||||||| |||||    
T  20123491 agacacattaattacactgacaacttttcttaagaaatgtgaaaaaagcaaagggagtttacatatagggacggaggaagtat 20123409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 23876077 - 23875996
Alignment:
Q  23 gacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg--ggtacatataggaacggagggagtat 102  Q
    |||| |||||||||||||||||||||| |||| |||||||||||||||||||||    |||||||||| |||||||||||||    
T  23876077 gacatattaactacactaacaactttttttaagaaatgtgaaaaaagcaaagggaatttacatatagggacggagggagtat 23875996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 26632890 - 26632836
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  26632890 aatagacacattaactacactaacaatttttcttaaaaaatgtgaaaaaagcaaa 26632836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 29636104 - 29636188
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg--tacatataggaacggagggagtatta 104  Q
    ||||||||||| |||| | |||||||||||||| ||||||| |||| ||||||||||  |||||||||| |||||||||||||||    
T  29636104 agacacattaattacattgacaacttttcttaaaaaatgtgtaaaatgcaaagggggtttacatatagggacggagggagtatta 29636188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 48193659 - 48193600
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||| ||||||||||    
T  48193659 aatagacacattaattacactaacaatttttcttaaaaaatgtgaaaaatgcaaaggggg 48193600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 37491680 - 37491760
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg--ggtacatataggaacggaggg 97  Q
    |||||||||||||| | ||||||||||||||||||| |||||||||||||| |||| |    |||||||||||||||||||    
T  37491680 aatagacacattaattgcactaacaacttttcttaagaaatgtgaaaaaagtaaagagaacttacatataggaacggaggg 37491760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 40740994 - 40740911
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa-agcaaagggggtacatataggaacggagggagta 101  Q
    |||||||| ||||| |||| |||||||||||||||| |||||||||||| |  ||||||| || ||||||| ||||||||||||    
T  40740994 aatagacatattaattacattaacaacttttcttaagaaatgtgaaaaagataaaaggggttatatatagggacggagggagta 40740911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 21753488 - 21753433
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    ||||||||| ||||||| |||||| |||||| |||| |||||||||||||||||||    
T  21753488 aatagacacgttaactaaactaaccacttttattaagaaatgtgaaaaaagcaaag 21753433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 4089564 - 4089609
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  4089564 agacacattaattacactgacaacttttcttaagaaatgtgaaaaa 4089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 6376201 - 6376273
Alignment:
Q  26 acattaactacactaacaacttttcttaataaatgtgaaaaaagcaaagggggtacatataggaacggagggagta 101  Q
    ||||||| ||||||||||| ||||||||| ||||||||||||||    |||  |||||||||| ||||||||||||    
T  6376201 acattaattacactaacaatttttcttaagaaatgtgaaaaaag---tgggcttacatatagggacggagggagta 6376273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 19236132 - 19236176
Alignment:
Q  23 gacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||    
T  19236132 gacacattaattacactaacaacttttcttacgaaatgtgaaaaa 19236176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 21388283 - 21388231
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    ||||||||||| |||||  |||| ||||||||| |||||||||||||||||||    
T  21388283 agacacattaattacaccgacaaattttcttaagaaatgtgaaaaaagcaaag 21388231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 46783903 - 46783950
Alignment:
Q  20 atagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||||| | |||||| |||||||||||| ||||||||||||    
T  46783903 atagacacattaatttcactaataacttttcttaagaaatgtgaaaaa 46783950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 31373759 - 31373813
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaa 73  Q
    |||||||||||||| | | ||||||| ||||||||| |||||||||||| |||||    
T  31373759 aatagacacattaattgccctaacaatttttcttaagaaatgtgaaaaatgcaaa 31373813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 37048076 - 37048030
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaa 68  Q
    ||||||||||| |||||| | |||||||||||| |||||||||||||    
T  37048076 agacacattaattacactgataacttttcttaagaaatgtgaaaaaa 37048030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Original strand, 48610200 - 48610250
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||| |||| | |||||||||||||| |||||||||||| ||||    
T  48610200 agacacattaattacagtgacaacttttcttaaaaaatgtgaaaaatgcaa 48610250  T

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Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 48767605 - 48767555
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaa 72  Q
    ||||||||||| |||||| ||||| ||| |||| |||||||||||||||||    
T  48767605 agacacattaattacactgacaacgttttttaagaaatgtgaaaaaagcaa 48767555  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 2276641 - 2276686
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||| |||||||||||| ||||||||| |||| ||||||||||||    
T  2276641 agacaaattaactacactgacaacttttgttaagaaatgtgaaaaa 2276686  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 18122106 - 18122151
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||| ||| |||||| |||||||||||||| ||||||||||||    
T  18122106 agacacactaattacactcacaacttttcttaagaaatgtgaaaaa 18122151  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 25750409 - 25750364
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||| ||||||||| |||| ||||||||||||    
T  25750409 agacacattaattacactgacaactttttttaagaaatgtgaaaaa 25750364  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 37673778 - 37673733
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||| ||||| |||||||| ||||||||||||    
T  37673778 agacacattaattacactcacaacatttcttaagaaatgtgaaaaa 37673733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 40263752 - 40263707
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    ||||||||||| |||||  |||||||||||||| ||||||||||||    
T  40263752 agacacattaattacaccgacaacttttcttaaaaaatgtgaaaaa 40263707  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 27213531 - 27213483
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaa 67  Q
    |||||||| ||||  | ||||||||||||||||||| ||||||||||||    
T  27213531 aatagacatattagttgcactaacaacttttcttaagaaatgtgaaaaa 27213483  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 29993019 - 29992979
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaat 59  Q
    |||||||||||||| | ||||||||||||||||||| ||||    
T  29993019 aatagacacattaattgcactaacaacttttcttaagaaat 29992979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1091 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold1091
Description:

Target: scaffold1091; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 1974 - 2031
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggg 76  Q
    |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||    
T  1974 aatagacacattaattacactaacaacttatcttaagaaatgtgaaaaaagcaaaggg 2031  T

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Target: scaffold0005 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 214660 - 214603
Alignment:
Q  21 tagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||| ||| ||||    
T  214660 tagacacattaattacactaacaacttttcttaagaaatgtgaaaaaagtaaaagggg 214603  T

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Target: scaffold0038 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 38538 - 38593
Alignment:
Q  19 aatagacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaag 74  Q
    |||||||||||||| || |||||||| |||| |||| |||||||||| ||||||||    
T  38538 aatagacacattaattatactaacaatttttattaagaaatgtgaaagaagcaaag 38593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 45542 - 45598
Alignment:
Q  22 agacacattaactacactaacaacttttcttaataaatgtgaaaaaagcaaaggggg 78  Q
    ||||||||||||| |||  ||||| ||| ||||||||||||||||| |||| |||||    
T  45542 agacacattaactgcacagacaacatttattaataaatgtgaaaaatgcaatggggg 45598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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