View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3654_low_5 (Length: 366)

Name: NF3654_low_5
Description: NF3654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3654_low_5
NF3654_low_5
[»] scaffold0390 (2 HSPs)
scaffold0390 (1-349)||(2703-3051)
scaffold0390 (1-349)||(15687-16035)
[»] chr2 (27 HSPs)
chr2 (1-349)||(22138213-22138561)
chr2 (84-293)||(32296025-32296227)
chr2 (84-313)||(24428859-24429077)
chr2 (89-253)||(32240500-32240661)
chr2 (84-173)||(32303738-32303827)
chr2 (1-83)||(19666581-19666663)
chr2 (1-82)||(19669222-19669303)
chr2 (3-71)||(9636800-9636868)
chr2 (1-83)||(68045-68127)
chr2 (1-83)||(43645946-43646028)
chr2 (1-70)||(23821730-23821799)
chr2 (1-70)||(23830809-23830878)
chr2 (8-81)||(25265520-25265592)
chr2 (4-71)||(24884742-24884809)
chr2 (1-83)||(24571404-24571486)
chr2 (3-71)||(6094771-6094839)
chr2 (3-71)||(24277816-24277884)
chr2 (3-71)||(19433456-19433524)
chr2 (3-71)||(25595075-25595143)
chr2 (1-83)||(25305498-25305581)
chr2 (9-71)||(16292925-16292987)
chr2 (1-51)||(24294667-24294717)
chr2 (10-54)||(33128107-33128151)
chr2 (1-83)||(31146293-31146374)
chr2 (8-69)||(22775331-22775392)
chr2 (8-69)||(22780709-22780770)
chr2 (226-255)||(32303694-32303723)
[»] scaffold0786 (1 HSPs)
scaffold0786 (1-349)||(4170-4518)
[»] scaffold1678 (1 HSPs)
scaffold1678 (84-261)||(103-280)
[»] chr5 (25 HSPs)
chr5 (1-83)||(23981628-23981710)
chr5 (1-76)||(23493972-23494047)
chr5 (1-83)||(7728473-7728555)
chr5 (1-83)||(19862262-19862344)
chr5 (3-83)||(6456679-6456759)
chr5 (3-71)||(24084132-24084200)
chr5 (3-71)||(29918020-29918088)
chr5 (3-71)||(26559939-26560007)
chr5 (3-70)||(22885697-22885764)
chr5 (1-71)||(21617069-21617139)
chr5 (1-71)||(37983417-37983487)
chr5 (3-83)||(3673917-3673997)
chr5 (3-71)||(21109805-21109873)
chr5 (1-83)||(5450955-5451037)
chr5 (1-83)||(432516-432598)
chr5 (1-67)||(21222736-21222802)
chr5 (2-83)||(1168317-1168397)
chr5 (3-68)||(16835426-16835491)
chr5 (8-71)||(11763629-11763692)
chr5 (3-70)||(23234610-23234677)
chr5 (8-83)||(24183245-24183319)
chr5 (9-67)||(28902252-28902310)
chr5 (9-67)||(28938647-28938705)
chr5 (2-83)||(11337299-11337379)
chr5 (8-69)||(23417301-23417362)
[»] chr7 (41 HSPs)
chr7 (3-83)||(20583666-20583746)
chr7 (1-83)||(13274840-13274922)
chr7 (3-83)||(14940810-14940890)
chr7 (1-71)||(9611360-9611430)
chr7 (1-71)||(9838932-9839002)
chr7 (1-83)||(12248233-12248315)
chr7 (1-83)||(13863042-13863124)
chr7 (8-82)||(31501233-31501307)
chr7 (1-71)||(34241312-34241382)
chr7 (1-83)||(49047786-49047868)
chr7 (2-71)||(16915052-16915121)
chr7 (2-83)||(16919613-16919694)
chr7 (3-83)||(4484782-4484862)
chr7 (1-83)||(16570118-16570200)
chr7 (1-83)||(16595462-16595544)
chr7 (1-71)||(48356697-48356767)
chr7 (3-71)||(13448951-13449019)
chr7 (3-71)||(17947716-17947784)
chr7 (3-83)||(38424274-38424354)
chr7 (9-83)||(14935421-14935495)
chr7 (9-83)||(15363014-15363088)
chr7 (3-69)||(15368403-15368469)
chr7 (2-67)||(13377583-13377648)
chr7 (3-71)||(4446268-4446335)
chr7 (3-71)||(9723931-9723999)
chr7 (3-71)||(15358852-15358920)
chr7 (3-71)||(28390367-28390435)
chr7 (3-71)||(33559702-33559770)
chr7 (3-71)||(46474056-46474124)
chr7 (1-71)||(17224062-17224132)
chr7 (3-69)||(45149657-45149723)
chr7 (8-83)||(28722169-28722245)
chr7 (8-71)||(8267852-8267915)
chr7 (1-83)||(12369953-12370034)
chr7 (2-83)||(11287471-11287551)
chr7 (2-83)||(12759041-12759121)
chr7 (1-83)||(3049636-3049717)
chr7 (1-83)||(3895078-3895159)
chr7 (1-83)||(26070377-26070458)
chr7 (1-83)||(26094164-26094245)
chr7 (4-36)||(14272045-14272077)
[»] scaffold0700 (1 HSPs)
scaffold0700 (1-71)||(2578-2648)
[»] scaffold0123 (1 HSPs)
scaffold0123 (5-83)||(8067-8145)
[»] scaffold0080 (2 HSPs)
scaffold0080 (1-67)||(43926-43992)
scaffold0080 (3-71)||(23796-23864)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-83)||(79592-79674)
[»] chr8 (33 HSPs)
chr8 (1-83)||(29306470-29306552)
chr8 (8-71)||(22742824-22742887)
chr8 (1-83)||(23158213-23158295)
chr8 (1-83)||(23226188-23226270)
chr8 (1-83)||(39446878-39446960)
chr8 (1-70)||(33611178-33611247)
chr8 (3-71)||(18261595-18261663)
chr8 (3-71)||(33528480-33528548)
chr8 (3-71)||(38635772-38635840)
chr8 (3-71)||(45559061-45559129)
chr8 (1-71)||(15933351-15933421)
chr8 (9-83)||(19331426-19331500)
chr8 (1-83)||(21198264-21198346)
chr8 (1-83)||(23837251-23837333)
chr8 (1-71)||(26011547-26011617)
chr8 (9-71)||(33172289-33172351)
chr8 (5-83)||(38533706-38533784)
chr8 (1-83)||(23149834-23149913)
chr8 (5-77)||(23151951-23152023)
chr8 (3-71)||(27233191-27233259)
chr8 (1-71)||(5854667-5854737)
chr8 (3-71)||(18041656-18041724)
chr8 (3-71)||(22497333-22497401)
chr8 (3-71)||(45465250-45465318)
chr8 (3-71)||(24552694-24552762)
chr8 (11-83)||(25296222-25296293)
chr8 (11-83)||(25758242-25758313)
chr8 (11-70)||(20709755-20709814)
chr8 (3-54)||(37653757-37653808)
chr8 (12-83)||(21681066-21681137)
chr8 (4-69)||(22735964-22736029)
chr8 (2-83)||(37611722-37611802)
chr8 (43-83)||(22981368-22981408)
[»] chr6 (25 HSPs)
chr6 (1-83)||(18398991-18399073)
chr6 (1-83)||(15079820-15079902)
chr6 (1-71)||(25651290-25651360)
chr6 (1-83)||(33324746-33324828)
chr6 (1-83)||(35136124-35136206)
chr6 (3-71)||(29605505-29605573)
chr6 (3-71)||(34966922-34966990)
chr6 (1-72)||(33538492-33538563)
chr6 (3-69)||(19854210-19854276)
chr6 (1-83)||(21623221-21623303)
chr6 (1-83)||(22361877-22361959)
chr6 (10-83)||(16887904-16887977)
chr6 (8-81)||(35009569-35009641)
chr6 (8-71)||(17083321-17083384)
chr6 (8-71)||(18629732-18629795)
chr6 (8-71)||(32352107-32352170)
chr6 (1-71)||(18381807-18381877)
chr6 (1-83)||(25367349-25367431)
chr6 (3-71)||(29160427-29160495)
chr6 (11-81)||(22848078-22848148)
chr6 (5-59)||(25919670-25919724)
chr6 (4-71)||(17557141-17557207)
chr6 (1-81)||(28195207-28195288)
chr6 (3-71)||(22462221-22462288)
chr6 (8-71)||(23222811-23222874)
[»] chr4 (28 HSPs)
chr4 (1-71)||(7964835-7964905)
chr4 (3-81)||(38764764-38764842)
chr4 (3-71)||(18238281-18238349)
chr4 (4-83)||(13809622-13809701)
chr4 (3-69)||(7185970-7186036)
chr4 (1-83)||(15044881-15044963)
chr4 (1-83)||(41166058-41166140)
chr4 (1-83)||(52265620-52265702)
chr4 (3-83)||(15013394-15013474)
chr4 (3-71)||(40905058-40905125)
chr4 (3-83)||(41256481-41256561)
chr4 (3-71)||(41916850-41916918)
chr4 (8-71)||(47468472-47468535)
chr4 (8-83)||(47535177-47535252)
chr4 (2-67)||(15109477-15109542)
chr4 (3-71)||(13590198-13590266)
chr4 (3-71)||(54398438-54398506)
chr4 (8-71)||(13442800-13442863)
chr4 (1-71)||(18276487-18276557)
chr4 (3-71)||(50220064-50220132)
chr4 (5-52)||(19821919-19821966)
chr4 (1-83)||(27961024-27961106)
chr4 (2-83)||(16732223-16732303)
chr4 (8-83)||(21959576-21959650)
chr4 (1-83)||(12837313-12837394)
chr4 (1-71)||(14901285-14901355)
chr4 (1-83)||(30232609-30232690)
chr4 (1-81)||(18494442-18494522)
[»] chr1 (20 HSPs)
chr1 (1-83)||(22143473-22143555)
chr1 (6-71)||(52400689-52400754)
chr1 (1-71)||(37233984-37234054)
chr1 (1-83)||(51627776-51627858)
chr1 (3-59)||(8538046-8538102)
chr1 (3-59)||(8603285-8603341)
chr1 (3-83)||(21195069-21195149)
chr1 (1-71)||(17608981-17609051)
chr1 (3-71)||(33397407-33397475)
chr1 (6-70)||(49997406-49997470)
chr1 (1-71)||(13376964-13377034)
chr1 (1-83)||(20177228-20177310)
chr1 (9-71)||(40436393-40436455)
chr1 (3-71)||(5768293-5768361)
chr1 (9-71)||(25093920-25093982)
chr1 (8-85)||(35522430-35522506)
chr1 (11-67)||(16645975-16646031)
chr1 (1-36)||(41229098-41229133)
chr1 (9-67)||(16656699-16656757)
chr1 (1-83)||(27329868-27329949)
[»] scaffold0253 (2 HSPs)
scaffold0253 (3-71)||(7457-7525)
scaffold0253 (3-71)||(16882-16950)
[»] scaffold0077 (1 HSPs)
scaffold0077 (3-71)||(6599-6667)
[»] scaffold0095 (1 HSPs)
scaffold0095 (1-83)||(33840-33922)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-83)||(104735-104816)
[»] chr3 (39 HSPs)
chr3 (1-83)||(9590866-9590948)
chr3 (1-83)||(11061118-11061200)
chr3 (1-83)||(14295491-14295573)
chr3 (1-83)||(14301118-14301200)
chr3 (1-83)||(14528124-14528206)
chr3 (1-83)||(17139561-17139643)
chr3 (1-83)||(11329073-11329155)
chr3 (3-81)||(14814879-14814957)
chr3 (3-69)||(33369034-33369100)
chr3 (2-83)||(14080563-14080644)
chr3 (3-71)||(4162329-4162397)
chr3 (3-71)||(6228749-6228817)
chr3 (3-71)||(12953019-12953087)
chr3 (8-71)||(41661625-41661688)
chr3 (1-83)||(16880176-16880258)
chr3 (2-83)||(3576550-3576631)
chr3 (2-83)||(17191595-17191676)
chr3 (2-71)||(17204754-17204823)
chr3 (1-70)||(34559952-34560021)
chr3 (8-71)||(43427640-43427703)
chr3 (9-71)||(11638418-11638480)
chr3 (1-83)||(12488838-12488920)
chr3 (1-83)||(12560348-12560430)
chr3 (5-83)||(14059325-14059403)
chr3 (1-83)||(39656579-39656661)
chr3 (3-71)||(31412457-31412525)
chr3 (3-59)||(50313242-50313298)
chr3 (3-69)||(1990858-1990924)
chr3 (1-51)||(38811152-38811202)
chr3 (1-83)||(54424065-54424146)
chr3 (1-83)||(55440961-55441043)
chr3 (8-69)||(38375804-38375865)
chr3 (8-71)||(10912945-10913008)
chr3 (8-83)||(12349652-12349726)
chr3 (1-83)||(17100706-17100787)
chr3 (1-83)||(17101391-17101472)
chr3 (1-71)||(47784871-47784941)
chr3 (1-54)||(15876121-15876174)
chr3 (2-83)||(17523002-17523082)
[»] scaffold0521 (1 HSPs)
scaffold0521 (5-83)||(11151-11229)
[»] scaffold0480 (1 HSPs)
scaffold0480 (1-83)||(8994-9076)
[»] scaffold0447 (2 HSPs)
scaffold0447 (1-83)||(4616-4698)
scaffold0447 (1-83)||(9230-9312)
[»] scaffold0342 (1 HSPs)
scaffold0342 (1-83)||(5993-6075)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-83)||(2428-2510)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-83)||(70418-70500)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-71)||(76971-77041)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-83)||(159352-159434)
scaffold0014 (2-83)||(85386-85466)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-71)||(69510-69580)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-82)||(11740-11821)
[»] scaffold0970 (1 HSPs)
scaffold0970 (1-65)||(2508-2572)
[»] scaffold0670 (1 HSPs)
scaffold0670 (3-71)||(7799-7867)
[»] scaffold0165 (2 HSPs)
scaffold0165 (3-71)||(30019-30087)
scaffold0165 (3-71)||(22054-22122)
[»] scaffold0389 (1 HSPs)
scaffold0389 (1-83)||(10715-10797)
[»] scaffold0125 (1 HSPs)
scaffold0125 (8-78)||(41709-41778)
[»] scaffold0025 (2 HSPs)
scaffold0025 (3-69)||(85588-85654)
scaffold0025 (1-67)||(53399-53465)
[»] scaffold0010 (1 HSPs)
scaffold0010 (1-71)||(31073-31143)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-71)||(197377-197447)
[»] scaffold0554 (1 HSPs)
scaffold0554 (2-83)||(1970-2050)
[»] scaffold0132 (1 HSPs)
scaffold0132 (8-69)||(13567-13628)
[»] scaffold1272 (1 HSPs)
scaffold1272 (1-81)||(362-442)
[»] scaffold0598 (1 HSPs)
scaffold0598 (3-71)||(3307-3374)
[»] scaffold0193 (1 HSPs)
scaffold0193 (3-71)||(4660-4728)
[»] scaffold0148 (1 HSPs)
scaffold0148 (3-71)||(37613-37681)
[»] scaffold0004 (2 HSPs)
scaffold0004 (3-71)||(27552-27620)
scaffold0004 (3-71)||(86412-86480)
[»] scaffold0456 (2 HSPs)
scaffold0456 (8-83)||(1658-1733)
scaffold0456 (8-83)||(8803-8878)
[»] scaffold0406 (1 HSPs)
scaffold0406 (8-71)||(14096-14159)
[»] scaffold0383 (1 HSPs)
scaffold0383 (1-83)||(7224-7307)
[»] scaffold0151 (1 HSPs)
scaffold0151 (8-83)||(22534-22609)
[»] scaffold0031 (2 HSPs)
scaffold0031 (4-71)||(97322-97389)
scaffold0031 (11-83)||(70676-70748)
[»] scaffold0018 (1 HSPs)
scaffold0018 (10-81)||(51312-51382)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-83)||(28589-28671)
[»] scaffold0138 (1 HSPs)
scaffold0138 (25-83)||(22541-22599)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-83)||(3372-3454)
[»] scaffold0022 (4 HSPs)
scaffold0022 (1-83)||(103034-103116)
scaffold0022 (1-83)||(109643-109725)
scaffold0022 (8-71)||(68082-68145)
scaffold0022 (3-51)||(131891-131939)
[»] scaffold0120 (1 HSPs)
scaffold0120 (2-83)||(21566-21646)
[»] scaffold0367 (1 HSPs)
scaffold0367 (10-54)||(17462-17506)
[»] scaffold0023 (1 HSPs)
scaffold0023 (10-54)||(61375-61419)
[»] scaffold0601 (1 HSPs)
scaffold0601 (8-71)||(998-1061)
[»] scaffold0162 (2 HSPs)
scaffold0162 (8-55)||(8332-8379)
scaffold0162 (1-83)||(7137-7219)
[»] scaffold0610 (1 HSPs)
scaffold0610 (2-83)||(689-769)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-69)||(33715-33783)
[»] scaffold0020 (1 HSPs)
scaffold0020 (3-71)||(108065-108132)
[»] scaffold1867 (1 HSPs)
scaffold1867 (8-83)||(204-278)
[»] scaffold0387 (1 HSPs)
scaffold0387 (3-34)||(1107-1138)
[»] scaffold0190 (1 HSPs)
scaffold0190 (8-83)||(9997-10071)
[»] scaffold0026 (1 HSPs)
scaffold0026 (8-83)||(89975-90050)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-83)||(24841-24922)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-83)||(46218-46299)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-71)||(35531-35601)
[»] scaffold0483 (1 HSPs)
scaffold0483 (12-81)||(6725-6794)
[»] scaffold0396 (1 HSPs)
scaffold0396 (2-83)||(11821-11901)
[»] scaffold0195 (1 HSPs)
scaffold0195 (2-83)||(631-711)
[»] scaffold0153 (1 HSPs)
scaffold0153 (3-48)||(1889-1934)
[»] scaffold0075 (1 HSPs)
scaffold0075 (2-83)||(4995-5075)
[»] scaffold0035 (1 HSPs)
scaffold0035 (2-83)||(118076-118156)


Alignment Details
Target: scaffold0390 (Bit Score: 329; Significance: 0; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 3051 - 2703
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcatacaatgaacatgagtttg 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3051 cacttagcaacaacaacatcaattaaacatggttctcttcataattcaaaaacatcatagcataattcaaccaattgagcatacaatgaacatgagtttg 2952  T
Q  101 tatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaattttcacaacattaagt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2951 tatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacaggtcaattgtgccaatagaattttcacaacattaagt 2852  T
Q  201 ggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcattcgcaa 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2851 ggcttttattttatttttcgtttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcattggcaa 2752  T
Q  301 gcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggttt 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2751 gcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggttt 2703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 16035 - 15687
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcatacaatgaacatgagtttg 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16035 cacttagcaacaacaacatcaattaaacatggttctcttcataattcaaaaacatcatagcataattcaaccaattgagcatacaatgaacatgagtttg 15936  T
Q  101 tatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaattttcacaacattaagt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15935 tatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacaggtcaattgtgccaatagaattttcacaacattaagt 15836  T
Q  201 ggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcattcgcaa 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15835 ggcttttattttatttttcgtttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcattggcaa 15736  T
Q  301 gcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggttt 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15735 gcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggttt 15687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 329; Significance: 0; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 22138213 - 22138561
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcatacaatgaacatgagtttg 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22138213 cacttagcaacaacaacatcaattaaacatggttctcttcataattcaaaaacatcatagcataattcaaccaattgagcatacaatgaacatgagtttg 22138312  T
Q  101 tatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaattttcacaacattaagt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22138313 tatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacaggtcaattgtgccaatagaattttcacaacattaagt 22138412  T
Q  201 ggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcattcgcaa 300  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22138413 ggcttttattttatttttcgtttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcattggcaa 22138512  T
Q  301 gcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggttt 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22138513 gcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggttt 22138561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 84 - 293
Target Start/End: Complemental strand, 32296227 - 32296025
Alignment:
Q  84 caatgaacatgagtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaa 183  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||    
T  32296227 caataaacatgattttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacagatacaggtcaattgtgccaatataa 32296128  T
Q  184 ttttcacaacattaagtggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaa 283  Q
     ||||||||||||||||||||||||||||||||||   ||| | |||||||||||||||||||||||||||| ||       |||||||| |||||||||    
T  32296127 atttcacaacattaagtggcttttattttattttttgattaggtttaatgaataagttgaatgattgtttaatca-------atcatcaagcttgtccaa 32296035  T
Q  284 acccaactca 293  Q
    ||||||||||    
T  32296034 acccaactca 32296025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 84 - 313
Target Start/End: Original strand, 24428859 - 24429077
Alignment:
Q  84 caatgaacatgagtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaa 183  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||    |||||||||||||    
T  24428859 caatgaacatgagtttgtatagttaggcataataaccaacaaaacatttttgcagagaaataataatttaaacagatacaggt----tgtgccaatagaa 24428954  T
Q  184 ttttcacaacattaagtggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaa 283  Q
    |||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||       |||||||| |||||||||    
T  24428955 ttttcacaacattaagtgacttttattttatttttcgtttaggattaatgaataagttgaatgattatttaatca-------atcatcaagcttgtccaa 24429047  T
Q  284 acccaactcattcgcaagcttgtaacattc 313  Q
    ||||||||| ||  ||||||| | ||||||    
T  24429048 acccaactcttttacaagcttttcacattc 24429077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 89 - 253
Target Start/End: Original strand, 32240500 - 32240661
Alignment:
Q  89 aacatgagtttgtatagttacacataataaccaacaacacatttttgcagagaaataa-taatttaaacatatacatgtcaattgtgccaatagaatttt 187  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||    ||| |||||||||||||    
T  32240500 aacaagagtttgtatagttacacataataaccaataacacatttttgcagagaaataaataatttaaacagatacaggt----tgtaccaatagaatttt 32240595  T
Q  188 cacaacattaagtggcttttattttatttttcatttacgattaatgaataagttgaatgattgttt 253  Q
    |||||||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||||||||    
T  32240596 cacaacattaagtggcctttattttatttttcgtttaggattaacgaataagttgaatgattgttt 32240661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 32303827 - 32303738
Alignment:
Q  84 caatgaacatgagtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgt 173  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||  ||||||||||||||    
T  32303827 caatgaacatgagtttttatagttacatataataaccaacaacacatttttgcagagaaataatggtttaaacagttacatgtcaattgt 32303738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 19666581 - 19666663
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||||| |||| |||||||||||||||||| |||||||||    
T  19666581 cacttagcaacaacaacatcaattgaacatggttctcatcataattcaataacaacatagcataattcaaccatttgagcata 19666663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 19669303 - 19669222
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcat 82  Q
    |||||||||||||||||||||||| |||||| ||| | |||||||||||||||| |||| |||||||||||||||| |||||    
T  19669303 cacttagcaacaacaacatcaattgaacatggttcacatcataattcaacaacaacatatcataattcaaccaattaagcat 19669222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 9636800 - 9636868
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  9636800 cttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 9636868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 68045 - 68127
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| ||||||| |||   || |||||||||||| |||||||||||||||| | |||||||||    
T  68045 cacttagcaacaacaacatcaattgaacatgaatcttaccacaattcaacaacaacatagcataattcaacaatttgagcata 68127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 43645946 - 43646028
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| |||||||||||   || | |||||||||| |||||||||||||||| | |||||||||    
T  43645946 cacttagcaacaacaacatcaattgaacatgattcttaccacagttcaacaacaacatagcataattcaacaatttgagcata 43646028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23821799 - 23821730
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 70  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||||||| | ||||||| |||||||    
T  23821799 cacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaataacatagcacaattcaa 23821730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23830878 - 23830809
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 70  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||||||| | ||||||| |||||||    
T  23830878 cacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaataacatagcacaattcaa 23830809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 25265592 - 25265520
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 81  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||| ||||||| ||||| ||||||||||||    
T  25265592 caacaacaacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattc-accaattgagca 25265520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 24884742 - 24884809
Alignment:
Q  4 ttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||||| | ||||||| ||||||||    
T  24884742 ttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaataacatagcacaattcaac 24884809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24571486 - 24571404
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||| ||||||||||||||||| | ||||| |||   || |||||||||| | ||||||||||||||||||||||||||||    
T  24571486 cacttaacaacaacaacatcaattgatcatgaatcttaacacaattcaacaaaaacatagcataattcaaccaattgagcata 24571404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 6094771 - 6094839
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| || ||||||||| |||| || ||||||||    
T  6094771 cttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacataacacaattcaac 6094839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 24277816 - 24277884
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||| ||||||||||||||| ||| |||||||||||| |||| || ||||||||    
T  24277816 cttaacaacaacaacatcatttaaacatgattctcatcacaattcaacaacaacataacacaattcaac 24277884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 19433524 - 19433456
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||| |||||||||||    | ||||||| |||| ||||||||||||||||    
T  19433524 cttagcaacaacaacatcaattgaacatgattcttacaacaattcaataacaacatagcataattcaac 19433456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 25595075 - 25595143
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| ||||||||||||||||||||||||| |||| ||| || |||| |||| ||||||| ||||||||    
T  25595075 cttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaaaaacaacatagcacaattcaac 25595143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 25305498 - 25305581
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaa-catcatagcataattcaaccaattgagcata 83  Q
    |||||||| ||||||||||||||| ||||||| |||   || |||||||||| || |||||||||||||||| | |||||||||    
T  25305498 cacttagccacaacaacatcaattgaacatgactcttaccacaattcaacaatcaacatagcataattcaacaatttgagcata 25305581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 16292987 - 16292925
Alignment:
Q  9 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| |||| ||| || ||||||||| ||||| | ||||||||    
T  16292987 aacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagtacaattcaac 16292925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 24294717 - 24294667
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaaca 51  Q
    |||||||||||||||||||||||| ||||||| ||||  ||||||||||||    
T  24294717 cacttagcaacaacaacatcaattgaacatgaatctcagcataattcaaca 24294667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 33128107 - 33128151
Alignment:
Q  10 acaacaacatcaattaaacatgattctcttcataattcaacaaca 54  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||    
T  33128107 acaacaatatcaattaaacatgattctcatcacaattcaacaaca 33128151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 31146374 - 31146293
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||  |||||||||| |||| || |||  | | |||||||||||| |||||||||||||||| | |||||||||    
T  31146374 cacttagcaacagtaacatcaattgaacaggaatcttattacaattcaacaaca-catagcataattcaacaatttgagcata 31146293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 22775392 - 22775331
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    |||||||||| |||||| ||||||| |||  ||| |||||||| ||| ||||||||||||||    
T  22775392 caacaacaacttcaattgaacatgaatcttatcacaattcaactacaacatagcataattca 22775331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 22780770 - 22780709
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    |||||||||| |||||| ||||||| |||  ||| |||||||| ||| ||||||||||||||    
T  22780770 caacaacaacttcaattgaacatgaatcttatcacaattcaactacaacatagcataattca 22780709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 255
Target Start/End: Complemental strand, 32303723 - 32303694
Alignment:
Q  226 gattaatgaataagttgaatgattgtttaa 255  Q
    ||||||||||||||||||||||||||||||    
T  32303723 gattaatgaataagttgaatgattgtttaa 32303694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 4518 - 4170
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcatacaatgaacatgagtttg 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4518 cacttagcaacaacaacatcaattaaacatggttctcttcataattcaaaaacatcatagcataattcaaccaattgagcatacaatgaacatgagtttg 4419  T
Q  101 tatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaattttcacaacattaagt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4418 tatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacaggtcaattgtgccaatagaattttcacaacattaagt 4319  T
Q  201 ggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcattcgcaa 300  Q
     |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4318 agcttttattttattttttgtttacgattaatgaataagttgaatgattgtttaaacaatcaattatcatcaatcttgtccaaacccaactcattggcaa 4219  T
Q  301 gcttgtaacattcctcatcaattgtcttggtcctgaatgcaaggggttt 349  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4218 gcttgtaacattcctcatcaattgtcttggtcccgaatgcaaggggttt 4170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1678 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold1678
Description:

Target: scaffold1678; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 84 - 261
Target Start/End: Original strand, 103 - 280
Alignment:
Q  84 caatgaacatgagtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacatatacatgtcaattgtgccaatagaa 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||    
T  103 caatgaacatgagtttgtatagttacacataataaccaacaacacatttttgcagagaaataataatttaaacagatccaggtcaattgtgccaatagaa 202  T
Q  184 ttttcacaacattaagtggcttttattttatttttcatttacgattaatgaataagttgaatgattgtttaaacaatc 261  Q
    ||||| ||||||||| || ||||||||||||||||  |||| ||||||| |||||||||||||||||||||| |||||    
T  203 ttttcgcaacattaaatgacttttattttatttttggtttaggattaataaataagttgaatgattgtttaatcaatc 280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 6e-25; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23981710 - 23981628
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||||||||||| |||| ||||||||||||| |||||||||    
T  23981710 cacttagcaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatatcataattcaaccatttgagcata 23981628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 23493972 - 23494047
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaatt 76  Q
    |||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| |||||||||||||||||||||    
T  23493972 cacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcaaccaatt 23494047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7728473 - 7728555
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| |||||||||||||||| | |||||||||    
T  7728473 cacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcaacaatttgagcata 7728555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 19862262 - 19862344
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||||||  ||||||||||  ||| |||||||||||| |||||||||||||||| | |||||||||    
T  19862262 cacttagcaacaacaacatcaattgcacatgattcttatcacaattcaacaacaacatagcataattcaacaatttgagcata 19862344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 6456679 - 6456759
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||| || |||||||| | |||||||||    
T  6456679 cttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacataacacaattcaacaatttgagcata 6456759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 24084132 - 24084200
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||||||||||||||||| | ||| |||||||||||| ||||||| ||||||||    
T  24084132 cttagcaacaacaacatcaattaaacatgattcacatcacaattcaacaacaacatagcacaattcaac 24084200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 29918020 - 29918088
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| || ||||||||    
T  29918020 cttagcaacaacaacatcagttaaacatgattctcatcataattcaacaacaacataacacaattcaac 29918088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 26560007 - 26559939
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||||||| |||||| ||| || ||||||||| ||||||| ||||||||    
T  26560007 cttagcaacaacaacatcaattaaacataattctcatcacaaatcaacaacaacatagcacaattcaac 26559939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 22885697 - 22885764
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 70  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||||||||| |||| || |||||||    
T  22885697 cttaacaacaacaacatcaattaaacatgattctcaacataattcaacaacaacataacacaattcaa 22885764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21617069 - 21617139
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||| ||| |||||||||||| ||||| | ||||||||    
T  21617069 cacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagaacaattcaac 21617139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37983417 - 37983487
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||| |||||||||||||||||||||||||||||| | | |||||||||| | ||||||| ||||||||    
T  37983417 cacttaacaacaacaacatcaattaaacatgattctcattacaattcaacaataacatagcacaattcaac 37983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 3673917 - 3673997
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||| | |||||  ||  ||| |||||||||||| |||||||||||||||| | |||||||||    
T  3673917 cttagcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacatagcataattcaacaatttgagcata 3673997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 21109805 - 21109873
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| || ||||||||| |||| || ||||||||    
T  21109805 cttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacataacacaattcaac 21109873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 5451037 - 5450955
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||| || ||||||| | |  ||| |||||||||||| |||||||||||||| | | |||||||||    
T  5451037 cacttagcaacaacaacatcagttgaacatgaattttatcacaattcaacaacaacatagcataattcatcaatttgagcata 5450955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 432516 - 432598
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| ||||||| |||   || ||| |||||||| ||||| |||||||| | | |||||||||    
T  432516 cacttagcaacaacaacatcaattgaacatgaatcttaccacaatccaacaacaacatagtataattcatcaatttgagcata 432598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21222802 - 21222736
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 67  Q
    ||||||||||||||||||| |||| ||||||| |||  ||| |||||||||||| ||||||| ||||    
T  21222802 cacttagcaacaacaacattaattgaacatgaatcttatcacaattcaacaacaacatagcacaatt 21222736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 1168397 - 1168317
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| ||| ||||||||| ||||||||||||||    
T  1168397 acttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacattgcataattc-accaattgagcata 1168317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 16835491 - 16835426
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattc 68  Q
    |||| |||||||||||| |||||||||||| |||| ||| || ||||||||| ||||||| |||||    
T  16835491 cttaacaacaacaacattaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattc 16835426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 11763692 - 11763629
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||| ||||||||||||| || | ||| || ||||||||| ||||||| ||||||||    
T  11763692 caacaacaacaacaattaaacatgaatcccatcacaaatcaacaacaacatagcacaattcaac 11763629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 23234677 - 23234610
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 70  Q
    |||| ||| |||||||||||||||||||||||||| |||  | |||||||||  |||||| |||||||    
T  23234677 cttaacaataacaacatcaattaaacatgattctcatcactaatcaacaacaaaatagcacaattcaa 23234610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 24183319 - 24183245
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||| |||||||| | |||||  ||| ||| |||||||||||| || |||||||||| ||||||||||||||    
T  24183319 caacaacaccatcaattgatcatgaaactcatcacaattcaacaacaacaaagcataattc-accaattgagcata 24183245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 28902252 - 28902310
Alignment:
Q  9 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 67  Q
    ||||||||| |||||| ||||||| |||  ||| |||||||||||| ||||||||||||    
T  28902252 aacaacaacttcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 28902310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 28938647 - 28938705
Alignment:
Q  9 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 67  Q
    ||||||||| |||||| ||||||| |||  ||| |||||||||||| ||||||||||||    
T  28938647 aacaacaacttcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 28938705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 11337379 - 11337299
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| |||| |||||||| ||||| ||||||||    
T  11337379 acttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacataacataattc-accaaatgagcata 11337299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 23417301 - 23417362
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    ||||||||||||||||||||||||| | ||  || || ||||||||| ||||||| ||||||    
T  23417301 caacaacaacatcaattaaacatgaatgtcaccacaaatcaacaacaacatagcacaattca 23417362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 20583746 - 20583666
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| | |||||||||    
T  20583746 cttaacaacaacaacatcaattaaacatgattctcatcataattcaacaacaacatagcacaattcaacaatttgagcata 20583666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13274840 - 13274922
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| ||||||||||||||||||||||||||||    
T  13274840 cacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcata 13274922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 14940810 - 14940890
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||| |||||||||||||| ||||||||||||||| |||||||||||||||| ||||||| |||||||| | |||||||||    
T  14940810 cttaacaacaacaacatcatttaaacatgattctcatcataattcaacaacaacatagcacaattcaacaatttgagcata 14940890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9611360 - 9611430
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  9611360 cacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaac 9611430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9838932 - 9839002
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  9838932 cacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaac 9839002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12248315 - 12248233
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||| ||| | ||||| |||  ||| |||||||||||| ||||||||||||||||||||||||||||    
T  12248315 cacttagcaacaacaacatccattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcata 12248233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 13863124 - 13863042
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||| ||||| ||||||| | |  ||| |||||||||||| ||||||||||||||||||||||||||||    
T  13863124 cacttagcaacaacaacaacaattgaacatgaatattatcacaattcaacaacaacatagcataattcaaccaattgagcata 13863042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 31501233 - 31501307
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcat 82  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||||||| | ||||||||    
T  31501233 caacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaacaatttgagcat 31501307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34241382 - 34241312
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||||||||    
T  34241382 cacttatcaacaacaacatcaattaaacatgattctcatcataattcaacaacaacataacacaattcaac 34241312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 49047868 - 49047786
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||| |||||||||||||||||||||||    
T  49047868 cacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacataacataattcaaccaattgagcata 49047786  T

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Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 16915121 - 16915052
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  16915121 acttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaac 16915052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 16919613 - 16919694
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||||||| ||||||  ||| |||||||||||| |||||||||||||| | | |||||||||    
T  16919613 acttagcaacaacaacatcaattaaacacgattcttatcacaattcaacaacaacatagcataattcatcaatttgagcata 16919694  T

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Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 4484782 - 4484862
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||| |||||||||||||||||||||||||||||| ||| ||||||||||||  |||||| |||||||| | |||||||||    
T  4484782 cttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaatatagcacaattcaacaatttgagcata 4484862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 16570200 - 16570118
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | |||||  ||  ||  |||||||||||| ||||||||||||||||||||||||||||    
T  16570200 cacttagcaacaacaacatcaattgatcatgaaacttatctcaattcaacaacaacatagcataattcaaccaattgagcata 16570118  T

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Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 16595462 - 16595544
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | |||||  ||  ||  |||||||||||| ||||||||||||||||||||||||||||    
T  16595462 cacttagcaacaacaacatcaattgatcatgaaacttatctcaattcaacaacaacatagcataattcaaccaattgagcata 16595544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48356697 - 48356767
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||||||||| |||| || ||||||||    
T  48356697 cacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacataacacaattcaac 48356767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 13449019 - 13448951
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||| | ||||||| ||||||||    
T  13449019 cttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaataacatagcacaattcaac 13448951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 17947784 - 17947716
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| || ||||||||| ||||||| ||||||||    
T  17947784 cttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacatagcacaattcaac 17947716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 38424274 - 38424354
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||| |||||||||||||| |||||||| |||||| |||||||||||||||| ||||| | |||||||| | |||||||||    
T  38424274 cttaacaacaacaacatcacttaaacataattctcatcataattcaacaacaacatagaacaattcaacaatttgagcata 38424354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 14935421 - 14935495
Alignment:
Q  9 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||| |||| || |||||||| | |||||||||    
T  14935421 aacaacaacatcatttaaaaatgattctcatcataattcaacaacaacatatcacaattcaacaatttgagcata 14935495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 15363014 - 15363088
Alignment:
Q  9 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||| |||| || |||||||| | |||||||||    
T  15363014 aacaacaacatcatttaaaaatgattctcatcataattcaacaacaacatatcacaattcaacaatttgagcata 15363088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 15368403 - 15368469
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    |||| |||||||||||||| ||||||||||||||| |||||||||||||||| |||| || ||||||    
T  15368403 cttaacaacaacaacatcatttaaacatgattctcatcataattcaacaacaacatatcacaattca 15368469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 13377583 - 13377648
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 67  Q
    ||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||    
T  13377583 acttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 13377648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 4446268 - 4446335
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| ||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||| ||||||||    
T  4446268 cttatcaacaacaacatcaattaa-catgattctcatcacaattcaacaacaacatagcacaattcaac 4446335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 9723999 - 9723931
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| ||||||||||||||||||||||||| |||| ||| || ||||||||| ||||||| ||||||||    
T  9723999 cttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaac 9723931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 15358852 - 15358920
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||| | ||| |||||||||||| |||| || ||||||||    
T  15358852 cttaacaacaacaacatcaattaaacatgattcccatcacaattcaacaacaacataacacaattcaac 15358920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 28390367 - 28390435
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| ||||||||||||||||||||||||||| || ||| |||||||||| | ||||||| ||||||||    
T  28390367 cttaacaacaacaacatcaattaaacatgattatcatcacaattcaacaataacatagcacaattcaac 28390435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 33559702 - 33559770
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| || ||||||||| |||| || ||||||||    
T  33559702 cttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacataacacaattcaac 33559770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 46474056 - 46474124
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| ||||||||||||||||||||||||| |||| ||| || ||||||||| ||||||| ||||||||    
T  46474056 cttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaac 46474124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 17224132 - 17224062
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||    | |||||||||||| ||||||||||||||||    
T  17224132 cacttagcaacaacaacatcaattgaacatgactcttacaacaattcaacaacaacatagcataattcaac 17224062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 45149657 - 45149723
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    |||| ||||||||||||||||||||||||| |||| ||| ||  |||||||||||||||| ||||||    
T  45149657 cttaacaacaacaacatcaattaaacatgaatctcatcacaaaccaacaacatcatagcacaattca 45149723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 28722169 - 28722245
Alignment:
Q  8 caacaacaacatcaattaaacatga-ttctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||| ||| |||||||||| ||||| ||| |||||||||||| ||||||| |||||||| | |||||||||    
T  28722169 caacaacaacttcatttaaacatgaattctcatcacaattcaacaacaacatagcacaattcaacaatttgagcata 28722245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 8267915 - 8267852
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||| |||||||||||||| |||||| ||| || ||||||||| ||||||| ||||||||    
T  8267915 caacaacatcatcaattaaacataattctcatcacaaatcaacaacaacatagcacaattcaac 8267852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12370034 - 12369953
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||||| |||||   |  ||| |||||||||||| ||  ||||||||| ||||||||||||||    
T  12370034 cacttagcaacaacaacatcaattaatcatgaaagttatcacaattcaacaacaacaaggcataattc-accaattgagcata 12369953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 11287471 - 11287551
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||| | | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  11287471 acttagcaacaacaacatcaactgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 11287551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 12759041 - 12759121
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||| ||||||||||| ||||| | |||||  ||  |||||||||| ||||| ||||||||||||| ||||||||||||||    
T  12759041 acttaacaacaacaacaacaattgatcatgaaacttatcataattcaccaacaacatagcataattc-accaattgagcata 12759121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3049636 - 3049717
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||| ||||||||||||| ||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  3049636 cacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 3049717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3895078 - 3895159
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||| ||||||||||||| ||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  3895078 cacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 3895159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 26070458 - 26070377
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| |||| |||||||| ||||||| ||||||    
T  26070458 cacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacataacataattc-accaattaagcata 26070377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 26094245 - 26094164
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| |||| |||||||| ||||||| ||||||    
T  26094245 cacttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacataacataattc-accaattaagcata 26094164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 14272077 - 14272045
Alignment:
Q  4 ttagcaacaacaacatcaattaaacatgattct 36  Q
    ||||||||||||||||||||| |||||||||||    
T  14272077 ttagcaacaacaacatcaattgaacatgattct 14272045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2578 - 2648
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||||||||||||    
T  2578 cacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcataattcaac 2648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 8067 - 8145
Alignment:
Q  5 tagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||| |||||| ||||| ||||||||| |||||| |||||||||||||| |||||||||||||    
T  8067 tagcaacaacaacatcaattgaacatggttctcatcataattccacaacaacatagcataattcacccaattgagcata 8145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43992 - 43926
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 67  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  43992 cacttagcaacaacaacatcaattaaacatgattctcatcataattcaacaacaacatagcacaatt 43926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 23864 - 23796
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||| ||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  23864 cttaacaacaacaacgtcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 23796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 79592 - 79674
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| |||||| ||| | |||||||||||||||| |||| |||||||||||||||| ||||||    
T  79592 cacttagcaacaacaacatcaattgaacatggttcacatcataattcaacaacaacatatcataattcaaccaattaagcata 79674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29306470 - 29306552
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||| |||||||| | |||||||||    
T  29306470 cacttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacatagcacaattcaacaatttgagcata 29306552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 22742824 - 22742887
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  22742824 caacaacaacatcaattaaacatgattctcatcataattcaacaacaacatagcacaattcaac 22742887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23158213 - 23158295
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||| |||||||||| | ||| |||||| ||||| |||||||||||||||| |||| |||||||||||||||||||||||    
T  23158213 cacttaggaacaacaacaactattgaacatggttctcatcataattcaacaacaacataacataattcaaccaattgagcata 23158295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23226270 - 23226188
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||| ||||||||||||||||| |||||| ||||| |||||||||||||||| |||| |||||||||| || |||||||||    
T  23226270 cacttaacaacaacaacatcaattgaacatggttctcatcataattcaacaacaacataacataattcaatcatttgagcata 23226188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 39446960 - 39446878
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| ||||||||||||||||||||| ||||||    
T  39446960 cacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttagcata 39446878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 33611247 - 33611178
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 70  Q
    ||||||||||||||||||||||||||||||| |||||  || |||||||||||| |||||||||||||||    
T  33611247 cacttagcaacaacaacatcaattaaacatggttctcaacacaattcaacaacaacatagcataattcaa 33611178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 18261663 - 18261595
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  18261663 cttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 18261595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 33528480 - 33528548
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||| ||||||||    
T  33528480 cttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacatagcacaattcaac 33528548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 38635840 - 38635772
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| |||| || ||||||||    
T  38635840 cttaacaacaacaacatcaattaaacatgattctcatcataattcaacaacaacataacacaattcaac 38635772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 45559129 - 45559061
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  45559129 cttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 45559061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15933351 - 15933421
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||||||||| |||| || ||||||||    
T  15933351 cacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacataacacaattcaac 15933421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 19331500 - 19331426
Alignment:
Q  9 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| || ||||| | |||||||||    
T  19331500 aacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaactcaacaatttgagcata 19331426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21198346 - 21198264
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| |||||||||||   || |||||||||||| |||| ||||||||||| | |||||||||    
T  21198346 cacttagcaacaacaacatcaattgaacatgattcttaccacaattcaacaacaacataacataattcaacaatttgagcata 21198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23837251 - 23837333
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| ||||||| |||   || |||||||||||| |||||||||||||||| | |||||||||    
T  23837251 cacttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaacaacatagcataattcaacaatttgagcata 23837333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26011547 - 26011617
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||| ||| |||||||||||| ||||||| ||||||||    
T  26011547 cacttagcaacaacaacatcaattcaacatgaatctcatcacaattcaacaacaacatagcacaattcaac 26011617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 33172289 - 33172351
Alignment:
Q  9 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  33172289 aacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 33172351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 38533706 - 38533784
Alignment:
Q  5 tagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||| ||||||| |||| ||| |||||||||||| |||||||||||||||  | |||||||||    
T  38533706 tagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaataatttgagcata 38533784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23149834 - 23149913
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||| |||| | ||| |||||||||||| ||||||||||||||   | ||||||||||||||||||||||||||    
T  23149834 cacttagcaacaaaaacaactattgaacatgattctcatcataattcaacaa---cttagcataattcaaccaattgagcata 23149913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 23152023 - 23151951
Alignment:
Q  5 tagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattg 77  Q
    ||||||||||| |||||||| |||| | ||||| |||||||||||||||| |||| |||||||||||||||||    
T  23152023 tagcaacaacagcatcaattgaacacggttctcatcataattcaacaacaacatatcataattcaaccaattg 23151951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 27233259 - 27233191
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||| || ||||||||    
T  27233259 cttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacataacacaattcaac 27233191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5854667 - 5854737
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||| ||| |||||||||||| ||||||| || |||||    
T  5854667 cacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcacaactcaac 5854737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 18041724 - 18041656
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| || ||||||||| |||| || ||||||||    
T  18041724 cttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacataacacaattcaac 18041656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 22497401 - 22497333
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| ||||||||||||||||||||||||| |||| ||| || ||||||||| ||||||| ||||||||    
T  22497401 cttatcaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaac 22497333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 45465318 - 45465250
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||| | ||||||  ||||||||    
T  45465318 cttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaataacatagctcaattcaac 45465250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 24552762 - 24552694
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| || | ||||||| |||| || ||||||||    
T  24552762 cttaacaacaacaacatcaattaaacatgattctcatcacaaattaacaacaacataacacaattcaac 24552694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 25296222 - 25296293
Alignment:
Q  11 caacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||| |||||| |||||||| ||||||| ||||| | |||||||| | |||||||||    
T  25296222 caacaacatcaattaaacataattctcatcataattgaacaaca-catagaacaattcaacaatttgagcata 25296293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 25758242 - 25758313
Alignment:
Q  11 caacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||| |||||| |||||||| ||||||| ||||| | |||||||| | |||||||||    
T  25758242 caacaacatcaattaaacataattctcatcataattgaacaaca-catagaacaattcaacaatttgagcata 25758313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 20709755 - 20709814
Alignment:
Q  11 caacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 70  Q
    ||||||||||||||||||||||||||| ||| || |||||||||  |||||| |||||||    
T  20709755 caacaacatcaattaaacatgattctcatcaaaactcaacaacaaaatagcacaattcaa 20709814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 37653808 - 37653757
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaaca 54  Q
    |||| ||||||||||||||||||||||||||||||  || ||||||||||||    
T  37653808 cttaacaacaacaacatcaattaaacatgattctcaacagaattcaacaaca 37653757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 21681066 - 21681137
Alignment:
Q  12 aacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||| | |||||  ||  ||| |||||||||||| || ||||||||| |||||||||||||||    
T  21681066 aacaacatcaattgatcatgaaactaatcacaattcaacaacaacaaagcataatttaaccaattgagcata 21681137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 22736029 - 22735964
Alignment:
Q  4 ttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    ||||||| ||||||||||||| ||||||| |||  ||| ||| |||||||| ||||| ||||||||    
T  22736029 ttagcaagaacaacatcaattgaacatgaatcttatcacaatccaacaacaacatagtataattca 22735964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 37611722 - 37611802
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||| ||||||||||| ||||| | |||||  || |||| |||||| ||||| || |||||||||| ||||||||||||||    
T  37611722 acttaacaacaacaacaacaattgatcatgaaacttttcacaattcatcaacaacaaagcataattc-accaattgagcata 37611802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 22981368 - 22981408
Alignment:
Q  43 aattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||| |||||||||||||||| | |||||||||    
T  22981368 aattcaacaacaacatagcataattcaacaatttgagcata 22981408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 18398991 - 18399073
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| ||||||| |||| ||| |||||||||||| |||||||||||||||| | |||||||||    
T  18398991 cacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcataattcaacaatttgagcata 18399073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15079902 - 15079820
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||| ||||| ||||||| |||||| ||||| ||||||||||||||||  ||||||||||||| |||||||||||||    
T  15079902 cacttagcaataacaatatcaattgaacatggttctcatcataattcaacaacaatatagcataattcacccaattgagcata 15079820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25651290 - 25651360
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  25651290 cacttagcaacaacaacatcaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaac 25651360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 33324746 - 33324828
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||| ||||||||||||| |||||| ||||| |||||||||||| |||  ||||||||||||| |||||||||||||    
T  33324746 cacttagcaataacaacatcaattgaacatggttctcatcataattcaaccacaatatagcataattcatccaattgagcata 33324828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 35136206 - 35136124
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||| ||||||||||||| |||||| ||||| |||||||||||| |||  ||||||||||||| |||||||||||||    
T  35136206 cacttagcaataacaacatcaattgaacatggttctcatcataattcaaccacaatatagcataattcatccaattgagcata 35136124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 29605505 - 29605573
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||||||| ||||||| ||||||||    
T  29605505 cttagcaacaacaacatcaattaagcatgattcacatcataattcaacaacaacatagcacaattcaac 29605573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 34966922 - 34966990
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| || ||||||||| ||||||||||||||||    
T  34966922 cttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacatagcataattcaac 34966990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33538563 - 33538492
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaacc 72  Q
    |||||||||| |||||||||||||||||||||||||| ||| |||||||||| | ||||||| |||||||||    
T  33538563 cacttagcaataacaacatcaattaaacatgattctcatcacaattcaacaataacatagcacaattcaacc 33538492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 19854210 - 19854276
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||| ||||||    
T  19854210 cttagcaacaacaacatcaattaaacatgattctcatcacaattcaacaataacatagcacaattca 19854276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 21623221 - 21623303
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||  |||||||||||   || |||||||||||| |||||||||||||||| | |||||||||    
T  21623221 cacttagcaacaacaacatcaatagaacatgattcttaccacaattcaacaacaacatagcataattcaacaatttgagcata 21623303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22361959 - 22361877
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| ||||||| | || ||| |||||||||||| |||||||||||||| | | |||||||||    
T  22361959 cacttagcaacaacaacatcaattgaacatgaatttcatcacaattcaacaacaacatagcataattcatcaatttgagcata 22361877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Complemental strand, 16887977 - 16887904
Alignment:
Q  10 acaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||| ||||||| |||||| ||||| |||||||||||||||| |||| ||||||||| |||||||||||||    
T  16887977 acaacaaaatcaattgaacatggttctcatcataattcaacaacaacataacataattcacccaattgagcata 16887904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 35009641 - 35009569
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 81  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||| ||||||| ||||| ||||||||||||    
T  35009641 caacaacaacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattc-accaattgagca 35009569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 17083384 - 17083321
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||| ||||||||    
T  17083384 caacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacatagcacaattcaac 17083321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 18629795 - 18629732
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| | ||||||| ||||||||    
T  18629795 caacaacaacatcaattaaacatgattctcatcacaattcaacaataacatagcacaattcaac 18629732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 32352107 - 32352170
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||||||||| ||| || ||||||||| |||| |||||||||||    
T  32352107 caacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacataacataattcaac 32352170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18381877 - 18381807
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| || |||||||||||||    
T  18381877 cacttagcaacaacaacatcaattgaacatgactcttatcacaattcaacaacaacaaagcataattcaac 18381807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 25367431 - 25367349
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| |||| || |||||||| | |||||||||    
T  25367431 cacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacataacacaattcaacaatttgagcata 25367349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 29160495 - 29160427
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||  || ||||||||| ||||||| ||||||||    
T  29160495 cttaacaacaacaacatcaattaaacatgattctcatcgcaaatcaacaacaacatagcacaattcaac 29160427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 22848078 - 22848148
Alignment:
Q  11 caacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 81  Q
    |||||||||||||||| ||| |||| | |||||||||||||||| ||||||| |||||||| | |||||||    
T  22848078 caacaacatcaattaagcattattcccatcataattcaacaacaacatagcacaattcaacaatttgagca 22848148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 25919670 - 25919724
Alignment:
Q  5 tagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcata 59  Q
    |||||||||||||||||||| |||||| ||||| |||||||||||||||| ||||    
T  25919670 tagcaacaacaacatcaattgaacatggttctcatcataattcaacaacaacata 25919724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 17557207 - 17557141
Alignment:
Q  4 ttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| |||||| |  ||| |||||||||||| ||||||| ||||||||    
T  17557207 ttagcaacaacaacatcaattaaatatgattataatcacaattcaacaacaacatagca-aattcaac 17557141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 28195288 - 28195207
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgat-tctcttcataattcaacaacatcatagcataattcaaccaattgagca 81  Q
    |||||||||||||| ||| ||||| | ||| |  |||| ||| |||||||||||||||| |||||||||||| |||||||||    
T  28195288 cacttagcaacaaccacaacaattgatcataaaatctcatcacaattcaacaacatcatggcataattcaactaattgagca 28195207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 22462288 - 22462221
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||| |||||||||| |||| ||| ||  |||||||||||||||| ||||||||    
T  22462288 cttaacaacaacaacatcatttaaacatgaatctcatcacaa-ccaacaacatcatagcacaattcaac 22462221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 23222811 - 23222874
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||||||||| |||| ||| || | ||||||| ||||| | ||||||||    
T  23222811 caacaacaacatcaattaaacatgaatctcatcacaaataaacaacaacatagtacaattcaac 23222874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7964905 - 7964835
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  7964905 cacttagcaacaacaaaatcaattaaacatgattctcatcataattcaacaacaacatagcacaattcaac 7964835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 81
Target Start/End: Original strand, 38764764 - 38764842
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 81  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||||| | |||||||    
T  38764764 cttaacaacaacaacatcaattaaacatgattctcatcataattgaacaacaacatcgcataattcaacaatttgagca 38764842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 18238349 - 18238281
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  18238349 cttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 18238281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 13809701 - 13809622
Alignment:
Q  4 ttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||||||||||||||| |||||||||||    
T  13809701 ttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaactaattgagcata 13809622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 7186036 - 7185970
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    |||||||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||| ||||||    
T  7186036 cttagcaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacatagcacaattca 7185970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 15044881 - 15044963
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| |||||||||||||| | | |||||||||    
T  15044881 cacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataattcatcaatttgagcata 15044963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 41166140 - 41166058
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| ||||||| |||   || |||||||||||| |||||||||||||||| | |||||||||    
T  41166140 cacttagcaacaacaacatcaattgaacatgactcttgccacaattcaacaacaacatagcataattcaacaatttgagcata 41166058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 52265702 - 52265620
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| ||| |||||||||||| | |||||||||    
T  52265702 cacttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacattgcataattcaacaatttgagcata 52265620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 15013474 - 15013394
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||| ||||||||| |||||||||||||||||||| ||| |||||||||||| | ||||| |||||||| | |||||||||    
T  15013474 cttaacaacaacaatatcaattaaacatgattctcatcacaattcaacaacaacctagcacaattcaacaatttgagcata 15013394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 40905125 - 40905058
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| |||||||||| ||| |||||||||||| ||||||| ||||||||    
T  40905125 cttagcaacaacaacatcaattaa-catgattctcatcacaattcaacaacaacatagcacaattcaac 40905058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 41256561 - 41256481
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||| |||||||||||||||||||||||| ||||| ||| |||||||||||| | ||||| |||||||| | |||||||||    
T  41256561 cttaacaacaacaacatcaattaaacatggttctcatcacaattcaacaacaacctagcacaattcaacaatttgagcata 41256481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 41916918 - 41916850
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  41916918 cttaacaacaacaacatcagttaaacatgattctcatcacaattcaacaacaacatagcacaattcaac 41916850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 47468535 - 47468472
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||| |||| || ||||||||    
T  47468535 caacaacaacatcaattaaacatgattctcatcacaattcaacaacaacataacacaattcaac 47468472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 47535252 - 47535177
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||| |||||| |||||||||||  |||||||||||||||| |||||||||||||| | | |||||||||    
T  47535252 caacaacaacgtcaattgaacatgattcttatcataattcaacaacaacatagcataattcatcaatttgagcata 47535177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 15109542 - 15109477
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 67  Q
    ||||||||||||||||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||    
T  15109542 acttagcaacaacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 15109477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 13590266 - 13590198
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| ||||||||||||||||||||||||| |||| ||| || ||||||||| ||||||| ||||||||    
T  13590266 cttaacaacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaac 13590198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 54398438 - 54398506
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| || ||||||||| |||| || ||||||||    
T  54398438 cttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacataacacaattcaac 54398506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 13442863 - 13442800
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| | |||| || ||||||||    
T  13442863 caacaacaacatcaattaaacatgattctcatcacaattcaacaataacataacacaattcaac 13442800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18276487 - 18276557
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||| |||||||||||||||||| ||||||| |||| ||| ||||||||||||  |||||| ||||||||    
T  18276487 cactttgcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaatatagcacaattcaac 18276557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 50220132 - 50220064
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| || ||||||||| || | || ||||||||    
T  50220132 cttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacacaacacaattcaac 50220064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 19821966 - 19821919
Alignment:
Q  5 tagcaacaacaacatcaattaaacatgattctcttcataattcaacaa 52  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||||||    
T  19821966 tagcaacaacaacatcaattgaacatggttctcatcataattcaacaa 19821919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 27961024 - 27961106
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||| ||||||||||||||||| | ||||| |||  | | ||||||||||||  ||| |||||||||||||||| ||||||    
T  27961024 cacttaacaacaacaacatcaattgatcatgaatcttataacaattcaacaacaatataacataattcaaccaatttagcata 27961106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 16732223 - 16732303
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||| ||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  16732223 acttagcaacaacgacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 16732303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 21959650 - 21959576
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  21959650 caacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 21959576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12837394 - 12837313
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||| ||||||||||||| ||| | |||||  ||  ||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  12837394 cacttaacaacaacaacatccattgaccatgaaacttatcacaatttaacaacaacatagcataattc-accaattgagcata 12837313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 14901285 - 14901355
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| || ||||||||   || ||||||| || | |||| |||||||||||    
T  14901285 cacttagcaacaacaacatcaattgaatatgattcttaccacaattcaataataacatatcataattcaac 14901355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 30232690 - 30232609
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||| ||||||||||||| ||| | |||||  ||  ||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  30232690 cacttaacaacaacaacatccattgatcatgaaacttatcacaatttaacaacaacatagcataattc-accaattgagcata 30232609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 18494522 - 18494442
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 81  Q
    |||||| |||||||| || ||||| | ||||| |||   || |||||||||||| |||||||| || ||||||||||||||    
T  18494522 cacttaacaacaacagcaacaattgatcatgaatcttaacacaattcaacaacaacatagcatcatccaaccaattgagca 18494442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 22143555 - 22143473
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||| |||||||||||||| | |||| ||||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  22143555 cacttagcagcaacaacatcaattgagcatggttctcatcataattcaacaacaacatagcataattcaaccatttgagcata 22143473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 52400689 - 52400754
Alignment:
Q  6 agcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  52400689 agcaacaacaacgtcaattaaacatgattctcatcataattcaacaacaacatagcacaattcaac 52400754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37234054 - 37233984
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||| ||| |||||||| ||| ||||||||||||||||    
T  37234054 cacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaaccacaacatagcataattcaac 37233984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 51627858 - 51627776
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||| |||||||||||||||||| ||||    
T  51627858 cacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaccatatcataattcaaccaattgaacata 51627776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 8538102 - 8538046
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcata 59  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  8538102 cttaacaacaacaacatcaattaaacatgattctcatcataattcaacaacaacata 8538046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 8603341 - 8603285
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcata 59  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  8603341 cttaacaacaacaacatcaattaaacatgattctcatcataattcaacaacaacata 8603285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 21195069 - 21195149
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||| |||||||||||| ||||||||||||||||| ||| |||||||||||| | ||||| |||||||| | |||||||||    
T  21195069 cttaacaacaacaacattaattaaacatgattctcatcacaattcaacaacaacctagcacaattcaacaatttgagcata 21195149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17608981 - 17609051
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||| ||||||||||| ||||| ||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  17608981 cacttaacaacaacaacaacaattgaacatgaatctcatcataattcaacaacaacatagcacaattcaac 17609051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 33397407 - 33397475
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| ||||||||| |||||||||||||||||||| ||| || ||||||||| ||||||| ||||||||    
T  33397407 cttaacaacaacaagatcaattaaacatgattctcatcacaaatcaacaacaacatagcacaattcaac 33397475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 49997470 - 49997406
Alignment:
Q  6 agcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 70  Q
    |||||||||||||||| |||||||||||||||  | ||||||||||||| ||||||| |||||||    
T  49997470 agcaacaacaacatcagttaaacatgattctcaccttaattcaacaacaacatagcacaattcaa 49997406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13377034 - 13376964
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| | ||||| | ||  ||||||||||||||| |||| |||||||||||    
T  13377034 cacttagcaacaacaacatcaattgagcatgactttcaccataattcaacaacaacataacataattcaac 13376964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 20177228 - 20177310
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| ||| ||| | |   || |||||||||||| |||||||||||||||| | |||||||||    
T  20177228 cacttagcaacaacaacatcaattgaacttgacttttaccacaattcaacaacaacatagcataattcaacaatttgagcata 20177310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 40436455 - 40436393
Alignment:
Q  9 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||| |||||| ||| || ||||||||| ||||||| ||||||||    
T  40436455 aacaacaacatcaattaaacataattctcatcacaaatcaacaacaacatagcacaattcaac 40436393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 5768361 - 5768293
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| || | ||||||| |||| || ||||||||    
T  5768361 cttaacaacaacaacatcaattaaacatgattctcatcacaaattaacaacaacataacacaattcaac 5768293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 25093920 - 25093982
Alignment:
Q  9 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| |||| ||| || ||||||||| |||| || ||||||||    
T  25093920 aacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacataacacaattcaac 25093982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 35522506 - 35522430
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcataca 85  Q
    ||||||||||||||||| | |||||  ||  ||| |||||||||||| || |||||||||| ||||||||||||||||    
T  35522506 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattc-accaattgagcataca 35522430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 16645975 - 16646031
Alignment:
Q  11 caacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 67  Q
    |||||||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||    
T  16645975 caacaacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 16646031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 41229133 - 41229098
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattct 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  41229133 cacttagcaacaacaacatcaattgaacatgattct 41229098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 16656699 - 16656757
Alignment:
Q  9 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 67  Q
    ||||||||| |||||| ||||||| |||  ||| |||||||||||| ||||||||||||    
T  16656699 aacaacaacttcaattgaacatgaatcttatcacaattcaacaacaacatagcataatt 16656757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27329949 - 27329868
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||| ||||||||||||| ||| | |||||  ||  ||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  27329949 cacttaacaacaacaacatccattgatcatgaaacttatcacaatttaacaacaacatagcataattc-accaattgagcata 27329868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 7457 - 7525
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  7457 cttagcaacaccaacatcaattaaacatgattctcatcataattcaacaacagcatagcacaattcaac 7525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 16882 - 16950
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  16882 cttagcaacaccaacatcaattaaacatgattctcatcataattcaacaacagcatagcacaattcaac 16950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 6599 - 6667
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  6599 cttagcaacaacatcatcaattaaacatgattctcatcataattcaacaacaacatagcacaattcaac 6667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 33922 - 33840
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| ||||||||||||||||||||| ||||||    
T  33922 cacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaatttagcata 33840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 104816 - 104735
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||||| |||| || || |||||||||||||||| |||| ||||||||||||| |||||||||    
T  104816 cacttagcaacaacaacatcaattaa-catggttatcatcataattcaacaacaacataacataattcaaccatttgagcata 104735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9590948 - 9590866
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||| ||||||||||||||||| |||||| ||||| ||| || ||||||||| |||||||||||||||| |||||||||||    
T  9590948 cacttaacaacaacaacatcaattgaacatggttctcatcagaactcaacaacaacatagcataattcaacaaattgagcata 9590866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11061200 - 11061118
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||| |||||||||||||| ||||||| | |  ||| |||||||||||| ||||||||||||||||||||||||||||    
T  11061200 cacttagcaccaacaacatcaattgaacatgactattatcacaattcaacaacaacatagcataattcaaccaattgagcata 11061118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14295491 - 14295573
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||| |||||||||||||||| | ||||| |||  ||| |||||||||||| ||||||||||||||||||||||||||||    
T  14295491 cacttagaaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcata 14295573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14301118 - 14301200
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||| |||||||||||||||| | ||||| |||  ||| |||||||||||| ||||||||||||||||||||||||||||    
T  14301118 cacttagaaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaaccaattgagcata 14301200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 14528206 - 14528124
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||||||| |||||||||||||||||||    
T  14528206 cacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcatgattcaaccaattgagcata 14528124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17139561 - 17139643
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||||||| |||||||||||||||||||    
T  17139561 cacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcatgattcaaccaattgagcata 17139643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11329155 - 11329073
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||||||||||||||| | |||||||||    
T  11329155 cacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacatagcataattcaacaatttgagcata 11329073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 14814957 - 14814879
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 81  Q
    |||| |||||||||||||||||||||||||||||  ||| |||||||||||| ||||||| |||||||| | |||||||    
T  14814957 cttaacaacaacaacatcaattaaacatgattcttatcacaattcaacaacaacatagcacaattcaacaatttgagca 14814879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 33369100 - 33369034
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    |||| |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||    
T  33369100 cttaacaacaaaaacatcaattaaacatgattctcatcataattcaacaacaacatagcacaattca 33369034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 14080563 - 14080644
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||| |||| ||||||||||||| |||||| ||||| ||||||||||||||||  |||||| |||||| |||||||||||||    
T  14080563 acttcgcaataacaacatcaattgaacatggttctcatcataattcaacaacaatatagcacaattcacccaattgagcata 14080644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 4162397 - 4162329
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||||||||||||||||| | |||| ||||||||||| |||| || ||||||||    
T  4162397 cttagcaacaacaacatcaattaaacatgattcacgtcatcattcaacaacaacataacacaattcaac 4162329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 6228817 - 6228749
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||||||||||||||| | | ||||||||| |||||| ||||||| ||||||||    
T  6228817 cttagcaacaacaacatcaattaaacatgatccacatcataattcgacaacaacatagcacaattcaac 6228749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 12953019 - 12953087
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||||||| | |||| ||| |||||||||||| ||||||| ||||||||    
T  12953019 cttagcaacaacaacatcaattaaacataaatctcatcacaattcaacaacaacatagcacaattcaac 12953087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 41661625 - 41661688
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| | ||||||| ||||||||    
T  41661625 caacaacaacatcaattaaacatgattctcatcacaattcaacaataacatagcacaattcaac 41661688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 16880176 - 16880258
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||| |||||||||| ||||||| |||  ||| |||||||||||| ||||||||||||  || |||||||||||    
T  16880176 cacttagcaacaataacatcaattgaacatgaatcttatcacaattcaacaacaacatagcataatttcacaaattgagcata 16880258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 3576631 - 3576550
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||| |||||||| |||  ||| |||||||||||| ||||||||||| || | | |||||||||    
T  3576631 acttagcaacaacaacatcaatcaaacatgactcttatcacaattcaacaacaacatagcataatccatcaatttgagcata 3576550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 17191595 - 17191676
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||| |||||||||||||||||||||||  ||| |||||| ||||| |||| ||||||||| | | |||||||||    
T  17191595 acttagcaacagcaacatcaattaaacatgattcttatcacaattcagcaacaacataacataattcatcaatttgagcata 17191676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 17204754 - 17204823
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||| ||||||||||||||   ||| ||||||||||||  |||||||||||||||    
T  17204754 acttagcaacaacaacatccattaaacatgattcctatcacaattcaacaacaatatagcataattcaac 17204823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34559952 - 34560021
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaa 70  Q
    |||||||||||||||||||||||  ||||||| |||| |||||||||||||||  |||| ||||||||||    
T  34559952 cacttagcaacaacaacatcaatcgaacatgaatctcatcataattcaacaactacataacataattcaa 34560021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 43427703 - 43427640
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||| |||||||||| ||| || ||||||||| ||||||| ||||||||    
T  43427703 caacaacaacatcaattaatcatgattctcatcacaactcaacaacaacatagcacaattcaac 43427640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 11638418 - 11638480
Alignment:
Q  9 aacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| |||| ||| || ||||||||| ||||||| ||||||||    
T  11638418 aacaacaacatcaattaaacatgaatctcatcacaaatcaacaacaacatagcacaattcaac 11638480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12488920 - 12488838
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | ||||| |||  ||| |||||||||||| |||| ||||||||| | | |||||||||    
T  12488920 cacttagcaacaacaacatcaattgatcatgaatcttatcacaattcaacaacaacataacataattcatcaatttgagcata 12488838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 12560430 - 12560348
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||| ||| | ||||| ||   ||| |||||||||||| |||||||||||||||||| ||| |||||    
T  12560430 cacttagcaacaacaacatccattgatcatgaatcatatcacaattcaacaacaacatagcataattcaaccagttgggcata 12560348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 14059403 - 14059325
Alignment:
Q  5 tagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||| |||||||||| ||||||| | |  ||| |||||||||||| |||||||||||||| | |||||||||||    
T  14059403 tagcaacaataacatcaattgaacatgaatattatcacaattcaacaacaacatagcataattcatcaaattgagcata 14059325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 39656579 - 39656661
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||| ||||||||| ||||||| |||    | |||||||||||| |||||||||||||||| | |||||||||    
T  39656579 cacttagcaacaaccacatcaattgaacatgaatcttacaacaattcaacaacaacatagcataattcaacaatttgagcata 39656661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 31412525 - 31412457
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| ||||||||||||||||||||| | |||||| ||| |||||||||||| |||| || ||||||||    
T  31412525 cttaacaacaacaacatcaattaaacctaattctcatcacaattcaacaacaacatatcacaattcaac 31412457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 50313242 - 50313298
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcata 59  Q
    |||| |||||||||||||||||||||||||||| | ||| |||||||||||| ||||    
T  50313242 cttaacaacaacaacatcaattaaacatgattcccatcacaattcaacaacaacata 50313298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 1990858 - 1990924
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    |||| |||||||||||||| ||||||||||||||| ||| | |||||||||| |||| || ||||||    
T  1990858 cttaacaacaacaacatcatttaaacatgattctcatcacagttcaacaacaacataacacaattca 1990924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 38811202 - 38811152
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaaca 51  Q
    |||||||||||||||||||||||| ||||||| ||||  ||||||||||||    
T  38811202 cacttagcaacaacaacatcaattgaacatgaatctcagcataattcaaca 38811152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 54424065 - 54424146
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||| ||||||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  54424065 cacttagcaataacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 54424146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 55441043 - 55440961
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||| |||||||||||||| | |||||  ||  ||| |||||||| ||| ||||| |||||||||||| |||||||||    
T  55441043 cacttagcatcaacaacatcaattgatcatgaaacttatcacaattcaaccacaacatagtataattcaaccagttgagcata 55440961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 38375865 - 38375804
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    ||||||||||||||||||||||||| ||||  || | |||||||||| ||||||| ||||||    
T  38375865 caacaacaacatcaattaaacatgaatctcaccacatttcaacaacaacatagcacaattca 38375804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 10912945 - 10913008
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||||||||| ||||  || | |||||| ||| ||||||| ||||||||    
T  10912945 caacaacaacatcaattaaacatgaatctcaccacatttcaaccacaacatagcacaattcaac 10913008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 12349726 - 12349652
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||| | |||||  ||  ||| |||||||||||| || |||||||||| ||||||||||||||    
T  12349726 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattc-accaattgagcata 12349652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17100706 - 17100787
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||| |||||| |||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  17100706 cacttaacaacaataacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 17100787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 17101391 - 17101472
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||| |||||| |||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  17101391 cacttaacaacaataacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 17101472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 47784941 - 47784871
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||| ||||||||||||||| | |||||| ||||    | |||||||||||| ||||||||||||||||    
T  47784941 cacttaacaacaacaacatcaactgaacatgtttcttactacaattcaacaacaacatagcataattcaac 47784871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15876121 - 15876174
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaaca 54  Q
    |||||| ||||||||||||||||| ||||||| |||  ||| ||||||||||||    
T  15876121 cacttaccaacaacaacatcaattgaacatgaatcttatcacaattcaacaaca 15876174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 17523082 - 17523002
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||   |||||  ||  ||| |||||| ||| | ||||||||||||| ||||||||||||||    
T  17523082 acttagcaacaacaacatcaattggtcatgaaacttatcacaattcatcaataacatagcataattc-accaattgagcata 17523002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 11151 - 11229
Alignment:
Q  5 tagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||||||||  |||||||| |||||| | |||||||||    
T  11151 tagcaacaacaacatcaattgaacatggttctcatcataattcaacaacaagatagcatatttcaactatttgagcata 11229  T

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Target: scaffold0480 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9076 - 8994
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | |||||  ||  ||| |||| ||||||| ||||||||||||||||||||||||||||    
T  9076 cacttagcaacaacaacatcaattgatcatgaaacttatcacaatttaacaacaacatagcataattcaaccaattgagcata 8994  T

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Target: scaffold0447 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 4616 - 4698
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| || |||| | |  ||| |||| ||||||| ||||||||||||||||||||||||||||    
T  4616 cacttagcaacaacaacatcaattgaaaatgaatattatcacaattaaacaacaacatagcataattcaaccaattgagcata 4698  T

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Target: scaffold0447; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 9230 - 9312
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| || |||| | |  ||| |||| ||||||| ||||||||||||||||||||||||||||    
T  9230 cacttagcaacaacaacatcaattgaaaatgaatattatcacaattaaacaacaacatagcataattcaaccaattgagcata 9312  T

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Target: scaffold0342 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 5993 - 6075
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| ||||||| | |  ||| |||||||||||  |||||||||||| |||||||||||||||    
T  5993 cacttagcaacaacaacatcaattgaacatgaatattatcacaattcaacaaccacatagcataatttaaccaattgagcata 6075  T

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Target: scaffold0243 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 2510 - 2428
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||| |||||||||||||||| ||||||| |||  |||||||||||||||| |||||||||||||| | | |||||||||    
T  2510 cacttaggaacaacaacatcaattgaacatgagtcttatcataattcaacaacaacatagcataattcatcaatttgagcata 2428  T

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Target: scaffold0058 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 70500 - 70418
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||| ||||||||||||| |||||| | ||| ||||||||||||||||  ||| ||||||||| |||||||||||||    
T  70500 cacttagcaataacaacatcaattgaacatggtcctcatcataattcaacaacaatataacataattcacccaattgagcata 70418  T

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Target: scaffold0053 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 77041 - 76971
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| ||||  || |||||||||||| ||||||||||||||||    
T  77041 cacttagcaacaacaacatcaattgaacatgaatctcaccacaattcaacaacaacatagcataattcaac 76971  T

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Target: scaffold0014 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 159352 - 159434
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| | |||||  ||  ||| ||||||||| || ||||||||||||||||||||||||||||    
T  159352 cacttagcaacaacaacatcaattgatcatgaaacttatcacaattcaacatcaacatagcataattcaaccaattgagcata 159434  T

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Target: scaffold0014; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 85386 - 85466
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| | ||||||||||| ||||||| ||||||    
T  85386 acttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacctagcataattc-accaattaagcata 85466  T

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Target: scaffold0009 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 69510 - 69580
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||| ||| |||||||||||| ||||||| ||||||||    
T  69510 cacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacatagcacaattcaac 69580  T

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Target: scaffold0021 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 11740 - 11821
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcat 82  Q
    |||||||||||||||||||||||| | |||||  ||  ||| ||||| |||||| |||||||||||||||||||||||||||    
T  11740 cacttagcaacaacaacatcaattgatcatgaaacttatcacaattctacaacaacatagcataattcaaccaattgagcat 11821  T

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Target: scaffold0970 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0970
Description:

Target: scaffold0970; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 2508 - 2572
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataa 65  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||||||||||| |||| |||||    
T  2508 cacttagcaacaacaacatcaattgaacatggttctcatcataattcaacaacaacatatcataa 2572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 7867 - 7799
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| || ||||||||| ||||||| ||||||||    
T  7867 cttaacaacaacaacatcaattaaacatgattctcatcacaaatcaacaacaacatagcacaattcaac 7799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 30019 - 30087
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||| | ||||||| ||||||||    
T  30019 cttaacaacaacaacatcaattaaacatgattctcatcacaattcaacaaaaacatagcacaattcaac 30087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 22054 - 22122
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| ||||||||||||||||||||||||| |||| ||| |||||||||||| ||||||  ||||||||    
T  22054 cttaacaacaacaacatcaattaaacatgaatctcatcacaattcaacaacaacatagcccaattcaac 22122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10715 - 10797
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||| ||||||||||||| |||||| ||||| ||||||||| |||||| | || |||||| ||||||||| ||||||    
T  10715 cacttagcaaaaacaacatcaattgaacatggttctcatcataattcgacaacaacgtatcataatccaaccaattaagcata 10797  T

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Target: scaffold0125 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 41709 - 41778
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattga 78  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||| ||||||| ||||| |||||||||    
T  41709 caacaacaacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattc-accaattga 41778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 85588 - 85654
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    |||||||||||||| |||| ||||||||||||||| |||||||||||||||| |||| || ||||||    
T  85588 cttagcaacaacaatatcacttaaacatgattctcatcataattcaacaacaacataacacaattca 85654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 53399 - 53465
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataatt 67  Q
    |||||||||||||||||||| ||| ||||||| |||| ||| |||||| |||||  |||||||||||    
T  53399 cacttagcaacaacaacatccattgaacatgaatctcatcacaattcatcaacaaaatagcataatt 53465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31073 - 31143
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||| ||| |||||||||| | ||||||| ||||||||    
T  31073 cacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaagaacatagcacaattcaac 31143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 197447 - 197377
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||| ||||||| |||| ||| |||||||||||| ||||| | ||||||||    
T  197447 cacttagcaacaacaacatcaattgaacatgaatctcatcacaattcaacaacaacataggacaattcaac 197377  T

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Target: scaffold0554 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 1970 - 2050
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||||| | ||||| |||  | | || ||||||||| ||||||||||||||||||||||||||||    
T  1970 acttagcaacaacaacatcaattgatcatgaatcttataacaaatcaacaaca-catagcataattcaaccaattgagcata 2050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 13567 - 13628
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||| ||||||| ||||||    
T  13567 caacaacaacatcaattgaacatggttctcatcataattcaacaacaacatagcaaaattca 13628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 362 - 442
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 81  Q
    |||||||||||||||||||||||| ||||||| |||   || |||||||||| | |||||||||||||||| | |||||||    
T  362 cacttagcaacaacaacatcaattgaacatgactcttaccacaattcaacaataacatagcataattcaacaatttgagca 442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 3307 - 3374
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| ||||||||||||||||||||||||||| || ||| |||||||||||| ||||||| ||||||||    
T  3307 cttaacaacaacaacatcaattaaacatgatt-tcatcacaattcaacaacaacatagcacaattcaac 3374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 4660 - 4728
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||| | ||| |||||||||||| |||| || ||||||||    
T  4660 cttaacaacaacaacatcaattaaacatgattcccatcacaattcaacaacaacataacacaattcaac 4728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 37613 - 37681
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||||||||||||||||||||||||| ||  |||||||||| | ||||||| ||||||||    
T  37613 cttaacaacaacaacatcaattaaacatgattctcgtctcaattcaacaataacatagcacaattcaac 37681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 27552 - 27620
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||| ||||||||||||||||||||| ||| ||||||||||||  |||||| ||||||||    
T  27552 cttaacaacaacatcatcaattaaacatgattctcatcacaattcaacaacaatatagcacaattcaac 27620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 86412 - 86480
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||| |||||||||||||||||||| || ||| |||| ||| | | ||||||| ||||||||    
T  86412 cttaacaacaaaaacatcaattaaacatgattatcatcacaattgaactataacatagcacaattcaac 86480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 1733 - 1658
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||| |||||| | |||| ||||| |||||||||||||||| |||||||||||||| ||| |||| ||||    
T  1733 caacaacaacttcaattgagcatggttctcatcataattcaacaacaacatagcataattcacccatttgaacata 1658  T

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Target: scaffold0456; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 8878 - 8803
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||| |||||| | |||| ||||| |||||||||||||||| |||||||||||||| ||| |||| ||||    
T  8878 caacaacaacttcaattgagcatggttctcatcataattcaacaacaacatagcataattcacccatttgaacata 8803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 14096 - 14159
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| | | ||| ||||||||||    
T  14096 caacaacaacatcaattaaacatgattctcatcacaattcaacaataacgtagtataattcaac 14159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 7224 - 7307
Alignment:
Q  1 cacttagcaacaacaacatc-aattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||| |||| || |||| | |  ||| |||| ||||||| ||||||||||||||||||||||||||||    
T  7224 cacttagcaacaacaacatccaattgaaaatgaatattatcacaattaaacaacaacatagcataattcaaccaattgagcata 7307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 22609 - 22534
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||||||| | ||  |||||||||||| ||||||| |||||||  | |||||||||    
T  22609 caacaacaacatcaattaaacatgattcacatctcaattcaacaacaacatagcacaattcaataatttgagcata 22534  T

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Target: scaffold0031 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 97389 - 97322
Alignment:
Q  4 ttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| |||||||| ||||||| ||||||| |||| ||||||||||||| || ||||||||||||||||    
T  97389 ttagtaacaacaatatcaattgaacatgaatctcatcataattcaacaccaacatagcataattcaac 97322  T

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Target: scaffold0031; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 70676 - 70748
Alignment:
Q  11 caacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||| | |||||  ||  ||| |||||||||||| || |||||||||||||||||| ||||||    
T  70676 caacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattcaaccaattaagcata 70748  T

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Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 81
Target Start/End: Complemental strand, 51382 - 51312
Alignment:
Q  10 acaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 81  Q
    |||||||||||||||||||||||||||| ||| |||||| ||||  |||| |||||||| ||||||||||||    
T  51382 acaacaacatcaattaaacatgattctcatcacaattcatcaaccacataacataattc-accaattgagca 51312  T

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Target: scaffold0150 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28589 - 28671
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||||| ||||| |||||    | |||||||||||| |||| ||||||||||| | |||||||||    
T  28589 cacttagcaacaacaacatcaattgaacataattcttactacaattcaacaacaacataccataattcaacaatttgagcata 28671  T

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Target: scaffold0138 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 22599 - 22541
Alignment:
Q  25 aaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||| ||||| |||||||||||||||| | |||||||||||| |||||||||||||    
T  22599 aaacatggttctcatcataattcaacaacaacttagcataattcacccaattgagcata 22541  T

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Target: scaffold0092 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3372 - 3454
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||| ||||||||||| | ||||| |||  ||| |||||||| ||| ||||||||||||  ||||||||||||||    
T  3372 cacttagcaacatcaacatcaattgatcatgaatcttatcacaattcaactacaacatagcataattggaccaattgagcata 3454  T

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Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 103116 - 103034
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||| ||||| |||||||||| ||||||| | |  ||| |||||||||||| |||||||||||||||| |||| ||||||    
T  103116 cacttagaaacaataacatcaattgaacatgaatgttatcacaattcaacaacaacatagcataattcaacaaatttagcata 103034  T

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Target: scaffold0022; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 109643 - 109725
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||||||||||||||||||| | | ||||| |||  ||| |||||||||||| ||||||| |||||||| | |||||||||    
T  109643 cacttagcaacaacaacatcaactgatcatgaatcttatcacaattcaacaacaacatagcaaaattcaacaatttgagcata 109725  T

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Target: scaffold0022; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 68145 - 68082
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||||||||| ||||  || | |||||||||| |||| || ||||||||    
T  68145 caacaacaacatcaattaaacatgaatctcaccacatttcaacaacaacataacacaattcaac 68082  T

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Target: scaffold0022; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 131891 - 131939
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaaca 51  Q
    |||| ||||||||||| ||||||| |||||||||| ||| |||||||||    
T  131891 cttaacaacaacaacaacaattaagcatgattctcatcacaattcaaca 131939  T

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Target: scaffold0120 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 21566 - 21646
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||| ||| |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  21566 acttagcaacaacaacatcaaataatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 21646  T

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Target: scaffold0367 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 17506 - 17462
Alignment:
Q  10 acaacaacatcaattaaacatgattctcttcataattcaacaaca 54  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  17506 acaacaacatcaattaaacatgattctcatcacaattcaacaaca 17462  T

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Target: scaffold0023 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 61419 - 61375
Alignment:
Q  10 acaacaacatcaattaaacatgattctcttcataattcaacaaca 54  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||    
T  61419 acaacaacatcaattaaacatgattctcatcacaattcaacaaca 61375  T

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Target: scaffold0601 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 1061 - 998
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||||||||||||||| ||||  || | |||||||||| ||||||| ||||||||    
T  1061 caacaacaacatcaattaaacatgaatctccccacatttcaacaacaacatagcacaattcaac 998  T

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Target: scaffold0162 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 8379 - 8332
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacat 55  Q
    ||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  8379 caacaacaacatcaattgaacatggttctcatcataattcaacaacat 8332  T

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Target: scaffold0162; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 7219 - 7137
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||| |||||||||||||| |||||||||||  ||| ||| ||| |||| |||| ||||||| ||| | |||||||||    
T  7219 cacttagcagcaacaacatcaattgaacatgattcttatcacaatccaataacaacataacataattaaacaatttgagcata 7137  T

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Target: scaffold0610 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 769 - 689
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||| ||||||||    
T  769 acttagcaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaaatgagcata 689  T

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Target: scaffold0103 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33715 - 33783
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattca 69  Q
    |||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||||    
T  33715 cacttagcaacaacaacatcaattgatcatgaaacttatcaaaattcatcaacaacatagcataattca 33783  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 108065 - 108132
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    |||| ||||||||||||||||||||||||||  || ||| |||||||||| | || |||||||||||||    
T  108065 cttaacaacaacaacatcaattaaacatgatcttcatcacaattcaacaataaca-agcataattcaac 108132  T

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Target: scaffold1867 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1867
Description:

Target: scaffold1867; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 204 - 278
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||| | |||||  ||  ||| |||||||||||| || |||||||||| ||||||||||||||    
T  204 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattc-accaattgagcata 278  T

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Target: scaffold0387 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 1138 - 1107
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgatt 34  Q
    ||||||||||||||||||||||||||||||||    
T  1138 cttagcaacaacaacatcaattaaacatgatt 1107  T

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Target: scaffold0190 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 9997 - 10071
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||| | |||||  ||  ||| |||||||||||| || |||||||||| ||||||||||||||    
T  9997 caacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaagcataattc-accaattgagcata 10071  T

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Target: scaffold0026 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 90050 - 89975
Alignment:
Q  8 caacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||| |||||| |  || |||||||||||||| |  |||||||||| ||  ||||||||||||    
T  90050 caacaacaacatcaattgaacatggtcttcatcataattcaacaataatatagcataatccactcaattgagcata 89975  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24922 - 24841
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||| ||||||||||||| ||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||||||||    
T  24922 cacttaacaacaacaacatctattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgagcata 24841  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 46218 - 46299
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||| |||||||||||| ||| | |||||  ||  ||| |||| ||||||| ||||||||||||| ||||||||||||||    
T  46218 cacttagaaacaacaacatccattgatcatgaaacttatcacaatttaacaacaacatagcataattc-accaattgagcata 46299  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35531 - 35601
Alignment:
Q  1 cacttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaac 71  Q
    ||||||||||||| |||||||||| ||||||| |||   || | |||||||||| |||||||||| |||||    
T  35531 cacttagcaacaaaaacatcaattgaacatgactcttaccacatttcaacaacaacatagcataaatcaac 35601  T

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Target: scaffold0483 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Original strand, 6725 - 6794
Alignment:
Q  12 aacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagca 81  Q
    ||||||||||||| ||||||| |||   || |||||||||| | |||||||||||||||| | |||||||    
T  6725 aacaacatcaattgaacatgactcttaccacaattcaacaatagcatagcataattcaacaatttgagca 6794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 11901 - 11821
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||||| | |||||  ||  ||| |||||| ||||| ||  ||||||||| ||||||||||||||    
T  11901 acttagcaacaacaacatcaattgatcatgaaacttatcaaaattcatcaacaacaatgcataattc-accaattgagcata 11821  T

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Target: scaffold0195 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 711 - 631
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    |||||| |||||||||||||||| | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||| ||||||||    
T  711 acttagtaacaacaacatcaattgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaaatgagcata 631  T

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Target: scaffold0153 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 1889 - 1934
Alignment:
Q  3 cttagcaacaacaacatcaattaaacatgattctcttcataattca 48  Q
    |||| ||||| |||||||||||||||||||||||| ||| ||||||    
T  1889 cttaacaacatcaacatcaattaaacatgattctcatcacaattca 1934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 4995 - 5075
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||||| | |||||  ||  ||| |||||||||||| || | |||||||| ||||||| ||||||    
T  4995 acttagcaacaacaacatcaattgatcatgaaacttatcacaattcaacaacaacaaatcataattc-accaattaagcata 5075  T

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Target: scaffold0035 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 118156 - 118076
Alignment:
Q  2 acttagcaacaacaacatcaattaaacatgattctcttcataattcaacaacatcatagcataattcaaccaattgagcata 83  Q
    ||||||||||||||||||||| | | |||||  ||  ||| |||||| ||||| ||||||||||||| ||||||||| ||||    
T  118156 acttagcaacaacaacatcaactgatcatgaaacttatcacaattcatcaacaacatagcataattc-accaattgaacata 118076  T

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