View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3654_low_8 (Length: 307)
Name: NF3654_low_8
Description: NF3654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3654_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 168; Significance: 5e-90; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 92 - 291
Target Start/End: Complemental strand, 29977931 - 29977731
Alignment:
| Q |
92 |
acatgaagaactagaaattaattccctatattccatnnnnnnn-ttatttcgctctaagaactagaaatctataaatatttcaacatatcaaaataatca |
190 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29977931 |
acatgaagaactagaaattaattccctatattccataaaaaaaattatttcgctctaagaactagaaatctataaatatttcaacatatcaaaataatca |
29977832 |
T |
|
| Q |
191 |
cattttactacctagttatcttgattcaattaaatgtatatgttaaatttgtctgtgcatccaaactaaattatcaaaataattaaacttttattgcaaa |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29977831 |
cattttactacctagttatcttgattcaattaaatgtatatattaaatttgtctgtgcatccaaactaaattatcaaaataattaaacttttattgcaaa |
29977732 |
T |
|
| Q |
291 |
c |
291 |
Q |
| |
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| |
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| T |
29977731 |
c |
29977731 |
T |
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