View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3654_low_9 (Length: 304)

Name: NF3654_low_9
Description: NF3654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3654_low_9
NF3654_low_9
[»] chr8 (43 HSPs)
chr8 (15-290)||(39719245-39719522)
chr8 (15-88)||(45101397-45101470)
chr8 (15-83)||(21648928-21648996)
chr8 (35-88)||(38844807-38844860)
chr8 (39-88)||(40842015-40842064)
chr8 (37-88)||(28623130-28623181)
chr8 (37-88)||(39021462-39021513)
chr8 (15-88)||(3650114-3650187)
chr8 (15-88)||(40102024-40102097)
chr8 (36-88)||(12659053-12659105)
chr8 (36-88)||(41344687-41344739)
chr8 (21-88)||(11114672-11114739)
chr8 (37-88)||(37873124-37873175)
chr8 (37-83)||(27836186-27836232)
chr8 (36-98)||(41293739-41293801)
chr8 (36-81)||(7129541-7129586)
chr8 (15-88)||(8841031-8841104)
chr8 (15-88)||(11879487-11879560)
chr8 (15-88)||(11896903-11896976)
chr8 (15-88)||(14029240-14029313)
chr8 (51-88)||(20288534-20288571)
chr8 (51-88)||(21075163-21075200)
chr8 (15-88)||(21418589-21418662)
chr8 (36-81)||(23258040-23258085)
chr8 (31-88)||(30943852-30943909)
chr8 (15-88)||(32174955-32175028)
chr8 (27-88)||(39259064-39259124)
chr8 (15-88)||(42716321-42716394)
chr8 (36-88)||(1065418-1065470)
chr8 (36-88)||(1158353-1158405)
chr8 (21-88)||(2621786-2621854)
chr8 (36-88)||(11223877-11223929)
chr8 (36-88)||(12045671-12045723)
chr8 (16-88)||(14707950-14708022)
chr8 (36-88)||(22852857-22852909)
chr8 (36-88)||(29509267-29509319)
chr8 (36-88)||(30927949-30928001)
chr8 (36-88)||(35633987-35634039)
chr8 (36-88)||(35937530-35937582)
chr8 (36-88)||(36497662-36497714)
chr8 (36-88)||(37343375-37343427)
chr8 (36-88)||(41273516-41273568)
chr8 (36-88)||(42012608-42012660)
[»] chr6 (22 HSPs)
chr6 (15-88)||(9954549-9954622)
chr6 (15-88)||(29383558-29383631)
chr6 (15-88)||(32457249-32457322)
chr6 (36-88)||(237416-237468)
chr6 (15-83)||(21506342-21506410)
chr6 (36-88)||(22492045-22492097)
chr6 (36-88)||(28965858-28965910)
chr6 (39-83)||(29172996-29173040)
chr6 (21-88)||(11785356-11785423)
chr6 (18-88)||(10521127-10521197)
chr6 (51-88)||(2056784-2056821)
chr6 (15-88)||(8395343-8395416)
chr6 (15-88)||(8778869-8778942)
chr6 (15-88)||(32253781-32253854)
chr6 (36-88)||(3339517-3339569)
chr6 (36-88)||(6435037-6435089)
chr6 (36-88)||(15722521-15722573)
chr6 (36-88)||(19789094-19789146)
chr6 (36-88)||(23633341-23633393)
chr6 (36-88)||(25924882-25924934)
chr6 (36-88)||(28883766-28883818)
chr6 (36-83)||(34570612-34570660)
[»] chr3 (58 HSPs)
chr3 (15-88)||(9027874-9027947)
chr3 (21-88)||(22813073-22813140)
chr3 (15-88)||(108432-108505)
chr3 (39-88)||(11173459-11173508)
chr3 (15-88)||(18169158-18169231)
chr3 (15-83)||(14207381-14207449)
chr3 (15-83)||(14215129-14215197)
chr3 (36-88)||(34271508-34271560)
chr3 (37-88)||(47849673-47849724)
chr3 (15-77)||(32717588-32717650)
chr3 (15-88)||(24537220-24537293)
chr3 (15-88)||(37303071-37303144)
chr3 (36-88)||(462419-462471)
chr3 (36-88)||(1901944-1901996)
chr3 (36-88)||(1911390-1911442)
chr3 (36-88)||(5398919-5398971)
chr3 (36-88)||(20380907-20380959)
chr3 (36-88)||(26279885-26279937)
chr3 (36-88)||(31176458-31176510)
chr3 (36-88)||(32931936-32931988)
chr3 (39-83)||(34733312-34733356)
chr3 (36-88)||(36818957-36819009)
chr3 (36-88)||(43409380-43409432)
chr3 (15-83)||(48649586-48649654)
chr3 (36-88)||(51464290-51464342)
chr3 (36-83)||(25959560-25959607)
chr3 (15-74)||(31249319-31249378)
chr3 (37-88)||(55344315-55344366)
chr3 (15-81)||(20893239-20893305)
chr3 (15-88)||(8066356-8066429)
chr3 (15-88)||(11335299-11335372)
chr3 (15-88)||(14957837-14957910)
chr3 (15-88)||(32457752-32457825)
chr3 (15-88)||(37303384-37303457)
chr3 (15-88)||(49196697-49196770)
chr3 (15-88)||(51410807-51410880)
chr3 (39-88)||(51672864-51672913)
chr3 (15-88)||(52727445-52727518)
chr3 (51-88)||(53473611-53473648)
chr3 (36-88)||(1295333-1295385)
chr3 (52-88)||(3069608-3069644)
chr3 (36-88)||(11327109-11327161)
chr3 (36-88)||(12792639-12792691)
chr3 (36-88)||(19418175-19418227)
chr3 (36-88)||(20215949-20216001)
chr3 (36-88)||(20714244-20714296)
chr3 (36-88)||(28300666-28300718)
chr3 (36-88)||(30400174-30400226)
chr3 (36-88)||(32008034-32008086)
chr3 (36-88)||(35376569-35376621)
chr3 (36-88)||(36869855-36869907)
chr3 (15-83)||(41309006-41309074)
chr3 (39-83)||(41348999-41349043)
chr3 (36-88)||(41877689-41877741)
chr3 (36-88)||(42424211-42424263)
chr3 (36-88)||(43900775-43900827)
chr3 (36-88)||(44334819-44334871)
chr3 (36-88)||(47773993-47774045)
[»] chr7 (34 HSPs)
chr7 (15-88)||(19426581-19426654)
chr7 (21-88)||(28824504-28824571)
chr7 (51-90)||(37173007-37173046)
chr7 (27-88)||(384364-384425)
chr7 (15-88)||(6353726-6353799)
chr7 (36-88)||(9055268-9055320)
chr7 (36-88)||(27164855-27164907)
chr7 (36-88)||(29162297-29162349)
chr7 (36-88)||(30864435-30864487)
chr7 (36-88)||(33881723-33881775)
chr7 (36-88)||(38023442-38023494)
chr7 (36-88)||(42060657-42060709)
chr7 (36-88)||(43079650-43079702)
chr7 (36-88)||(48866948-48867000)
chr7 (21-88)||(49069250-49069318)
chr7 (36-83)||(28596912-28596959)
chr7 (51-90)||(37325852-37325891)
chr7 (39-81)||(3040420-3040462)
chr7 (50-88)||(31274561-31274599)
chr7 (39-93)||(41966328-41966382)
chr7 (15-88)||(2790178-2790251)
chr7 (39-88)||(20406542-20406591)
chr7 (51-88)||(29763831-29763868)
chr7 (15-88)||(33684681-33684754)
chr7 (35-88)||(39369303-39369356)
chr7 (15-88)||(40842406-40842479)
chr7 (36-88)||(2756947-2756999)
chr7 (36-88)||(4971291-4971343)
chr7 (36-80)||(7701332-7701376)
chr7 (36-88)||(17500698-17500750)
chr7 (36-88)||(17552464-17552516)
chr7 (36-88)||(28081800-28081852)
chr7 (36-88)||(30941179-30941231)
chr7 (36-88)||(33050184-33050236)
[»] chr5 (42 HSPs)
chr5 (36-88)||(42699058-42699110)
chr5 (21-88)||(12718383-12718450)
chr5 (15-93)||(19376129-19376207)
chr5 (15-81)||(40223782-40223848)
chr5 (15-88)||(125093-125166)
chr5 (15-88)||(34381013-34381086)
chr5 (36-88)||(12779624-12779676)
chr5 (15-83)||(12910790-12910858)
chr5 (36-88)||(39595273-39595325)
chr5 (38-83)||(8097255-8097301)
chr5 (18-88)||(10232500-10232570)
chr5 (39-88)||(7077363-7077412)
chr5 (15-88)||(14073053-14073125)
chr5 (36-88)||(9594479-9594531)
chr5 (36-88)||(9599746-9599798)
chr5 (51-83)||(11464155-11464187)
chr5 (15-83)||(18449267-18449335)
chr5 (36-88)||(30574395-30574447)
chr5 (36-88)||(36581483-36581535)
chr5 (36-88)||(36713196-36713248)
chr5 (37-88)||(14914373-14914424)
chr5 (37-88)||(32873168-32873219)
chr5 (37-88)||(38500944-38500995)
chr5 (39-81)||(5698349-5698391)
chr5 (18-88)||(12661947-12662017)
chr5 (50-88)||(41383386-41383424)
chr5 (51-88)||(3263541-3263578)
chr5 (36-88)||(19844326-19844379)
chr5 (51-88)||(38010873-38010910)
chr5 (15-83)||(6515435-6515503)
chr5 (36-88)||(7144578-7144630)
chr5 (36-88)||(12401193-12401245)
chr5 (36-88)||(19127125-19127177)
chr5 (36-88)||(22647579-22647631)
chr5 (36-88)||(26660429-26660481)
chr5 (36-88)||(26932021-26932073)
chr5 (36-88)||(28903992-28904044)
chr5 (36-88)||(28940387-28940439)
chr5 (36-88)||(31708371-31708423)
chr5 (52-88)||(35814454-35814490)
chr5 (36-88)||(36548398-36548450)
chr5 (36-88)||(39788724-39788776)
[»] chr4 (71 HSPs)
chr4 (23-83)||(12694433-12694493)
chr4 (21-88)||(51717285-51717352)
chr4 (15-88)||(16004323-16004396)
chr4 (36-88)||(1031756-1031808)
chr4 (36-88)||(4896518-4896570)
chr4 (36-88)||(31240649-31240701)
chr4 (36-88)||(35332707-35332759)
chr4 (21-88)||(23094377-23094444)
chr4 (35-88)||(169519-169572)
chr4 (15-88)||(11064086-11064159)
chr4 (15-88)||(34116537-34116610)
chr4 (15-88)||(46794498-46794571)
chr4 (15-88)||(52392222-52392295)
chr4 (15-88)||(53308341-53308414)
chr4 (15-88)||(53583125-53583198)
chr4 (36-88)||(5208345-5208397)
chr4 (36-88)||(31804347-31804399)
chr4 (36-88)||(36444413-36444465)
chr4 (15-83)||(38844487-38844555)
chr4 (36-88)||(39010155-39010207)
chr4 (36-88)||(44170637-44170689)
chr4 (41-89)||(45548807-45548855)
chr4 (48-88)||(51318704-51318744)
chr4 (36-88)||(52669627-52669679)
chr4 (36-88)||(55595950-55596002)
chr4 (36-83)||(29525864-29525911)
chr4 (21-88)||(31221414-31221481)
chr4 (36-83)||(33484126-33484173)
chr4 (21-88)||(51397874-51397941)
chr4 (15-90)||(52224092-52224167)
chr4 (36-83)||(52487287-52487334)
chr4 (42-88)||(26885292-26885338)
chr4 (15-81)||(32408469-32408534)
chr4 (51-88)||(1796367-1796404)
chr4 (51-88)||(7037517-7037554)
chr4 (31-88)||(9162067-9162124)
chr4 (15-88)||(23347776-23347849)
chr4 (15-88)||(25523195-25523268)
chr4 (15-88)||(44165910-44165983)
chr4 (15-88)||(47998595-47998668)
chr4 (15-88)||(51039113-51039186)
chr4 (15-88)||(51296186-51296259)
chr4 (51-88)||(51377326-51377363)
chr4 (36-81)||(52632164-52632209)
chr4 (51-88)||(54800999-54801036)
chr4 (51-88)||(55268034-55268071)
chr4 (36-88)||(149305-149357)
chr4 (36-88)||(1562554-1562606)
chr4 (36-88)||(3222990-3223042)
chr4 (36-88)||(9032781-9032833)
chr4 (36-100)||(12241047-12241111)
chr4 (36-88)||(13267496-13267548)
chr4 (36-88)||(15596397-15596449)
chr4 (36-88)||(20632666-20632718)
chr4 (36-88)||(27001427-27001479)
chr4 (36-88)||(29513714-29513766)
chr4 (36-88)||(33438046-33438098)
chr4 (36-80)||(34616359-34616403)
chr4 (36-88)||(36812421-36812473)
chr4 (36-80)||(38382120-38382164)
chr4 (52-88)||(39241324-39241360)
chr4 (36-88)||(43358614-43358666)
chr4 (36-88)||(44368220-44368272)
chr4 (36-88)||(46566930-46566982)
chr4 (36-88)||(47105912-47105964)
chr4 (36-80)||(48402358-48402402)
chr4 (36-88)||(49424838-49424890)
chr4 (37-88)||(50721763-50721815)
chr4 (36-88)||(51224856-51224908)
chr4 (36-88)||(56025257-56025309)
chr4 (36-80)||(56364278-56364322)
[»] scaffold0011 (2 HSPs)
scaffold0011 (15-88)||(219661-219734)
scaffold0011 (36-88)||(18596-18648)
[»] chr1 (34 HSPs)
chr1 (36-88)||(27352631-27352683)
chr1 (36-88)||(50226897-50226949)
chr1 (21-88)||(45740547-45740614)
chr1 (15-88)||(366658-366731)
chr1 (15-88)||(18541048-18541121)
chr1 (15-88)||(36690569-36690642)
chr1 (15-88)||(36706670-36706743)
chr1 (36-88)||(26501296-26501348)
chr1 (36-88)||(27810265-27810317)
chr1 (36-88)||(43457837-43457889)
chr1 (37-88)||(3606113-3606164)
chr1 (36-83)||(14247670-14247717)
chr1 (36-83)||(48576523-48576570)
chr1 (36-103)||(50777441-50777508)
chr1 (38-88)||(25302663-25302713)
chr1 (18-88)||(30439251-30439321)
chr1 (15-88)||(15061846-15061919)
chr1 (36-88)||(20288357-20288410)
chr1 (15-88)||(28253016-28253089)
chr1 (15-88)||(31436821-31436894)
chr1 (15-88)||(39010815-39010888)
chr1 (15-88)||(48872948-48873020)
chr1 (36-89)||(52714978-52715031)
chr1 (36-88)||(3919301-3919353)
chr1 (36-88)||(13813559-13813611)
chr1 (36-88)||(16658439-16658491)
chr1 (36-88)||(18610774-18610826)
chr1 (36-99)||(21433418-21433482)
chr1 (36-88)||(29489377-29489429)
chr1 (36-88)||(30530592-30530644)
chr1 (40-88)||(39669807-39669855)
chr1 (36-80)||(46907005-46907049)
chr1 (36-88)||(49621364-49621416)
chr1 (35-83)||(50035554-50035602)
[»] chr2 (51 HSPs)
chr2 (48-91)||(26321727-26321770)
chr2 (48-91)||(26321895-26321938)
chr2 (38-88)||(39247483-39247533)
chr2 (15-88)||(6365187-6365260)
chr2 (15-88)||(13711062-13711135)
chr2 (15-88)||(23880096-23880169)
chr2 (36-92)||(33030120-33030177)
chr2 (15-88)||(36435682-36435755)
chr2 (36-88)||(3091742-3091794)
chr2 (36-88)||(5067664-5067716)
chr2 (36-88)||(5954501-5954553)
chr2 (36-88)||(6884911-6884963)
chr2 (36-88)||(12600049-12600101)
chr2 (36-88)||(14140355-14140407)
chr2 (36-88)||(14797668-14797720)
chr2 (36-88)||(29893611-29893663)
chr2 (36-88)||(30856808-30856860)
chr2 (36-88)||(36582260-36582312)
chr2 (36-88)||(36909861-36909913)
chr2 (36-88)||(41715438-41715490)
chr2 (36-88)||(43356290-43356342)
chr2 (37-88)||(4738591-4738642)
chr2 (5-88)||(13104480-13104563)
chr2 (37-88)||(33296090-33296141)
chr2 (36-83)||(39454257-39454304)
chr2 (15-89)||(9202513-9202587)
chr2 (50-88)||(37966368-37966406)
chr2 (15-88)||(1889148-1889221)
chr2 (15-88)||(5455450-5455523)
chr2 (51-88)||(30487502-30487539)
chr2 (15-88)||(31635807-31635880)
chr2 (15-88)||(32688541-32688614)
chr2 (15-88)||(32749999-32750072)
chr2 (15-88)||(41353494-41353567)
chr2 (36-88)||(2308340-2308392)
chr2 (36-88)||(3196105-3196157)
chr2 (36-88)||(4432315-4432367)
chr2 (36-88)||(7498009-7498061)
chr2 (36-88)||(10687942-10687994)
chr2 (36-88)||(11229339-11229391)
chr2 (36-88)||(13553148-13553200)
chr2 (36-88)||(15283268-15283320)
chr2 (36-88)||(23048101-23048153)
chr2 (36-80)||(25270808-25270852)
chr2 (52-88)||(25801836-25801872)
chr2 (36-88)||(27307249-27307301)
chr2 (36-88)||(31296863-31296915)
chr2 (36-88)||(34144569-34144621)
chr2 (36-88)||(34249581-34249633)
chr2 (36-88)||(34442114-34442166)
chr2 (36-88)||(39737704-39737756)
[»] scaffold0154 (1 HSPs)
scaffold0154 (39-88)||(4316-4365)
[»] scaffold0060 (1 HSPs)
scaffold0060 (15-88)||(6818-6891)
[»] scaffold0026 (1 HSPs)
scaffold0026 (15-88)||(113626-113699)
[»] scaffold0018 (1 HSPs)
scaffold0018 (15-88)||(36003-36076)
[»] scaffold0003 (2 HSPs)
scaffold0003 (51-88)||(88809-88846)
scaffold0003 (36-88)||(337119-337171)
[»] scaffold0131 (1 HSPs)
scaffold0131 (36-88)||(15552-15604)
[»] scaffold0204 (1 HSPs)
scaffold0204 (15-88)||(27340-27413)
[»] scaffold0184 (1 HSPs)
scaffold0184 (36-88)||(16612-16664)
[»] scaffold0130 (1 HSPs)
scaffold0130 (36-88)||(25704-25755)
[»] scaffold0078 (1 HSPs)
scaffold0078 (36-88)||(56180-56232)
[»] scaffold0049 (1 HSPs)
scaffold0049 (36-88)||(72187-72239)
[»] scaffold0020 (1 HSPs)
scaffold0020 (36-88)||(155907-155959)
[»] scaffold0004 (1 HSPs)
scaffold0004 (36-88)||(249160-249212)


Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 15 - 290
Target Start/End: Original strand, 39719245 - 39719522
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattcttttagtaataatagagaattttttgg 114  Q
    ||||||||||||||| |||  |||| ||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  39719245 aagaggataatgtaactatcagagaaaaagttatcaaaaagttgtcacaaattgattgtacaaatatcatttcttttagtaataatagagaattttttgg 39719344  T
Q  115 accgtgtggtagtgcggaaaggaaaggggga--ctaagtaaagttttaattaggataaagaattgtggataattatggcatcaccctataagacatatac 212  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  39719345 accgtgtggtagtgcggaaaggaaagggggagactaagtaaagttttaattaggataaggaattgtggataattatggcatcaccctataaggcatatac 39719444  T
Q  213 ataaacaacaatggtggagtgggattgtgacacttgtaagatgatcaaacattggttgctttcatttgaggcatgttt 290  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39719445 ataaacaacaatggtgaagtgggattgtgacacttgtaagatgatcaaacattggttgctttcatttgaggcatgttt 39719522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 45101470 - 45101397
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  45101470 aagaggataatgtgagtatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 45101397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 21648928 - 21648996
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||||||||||| | |||  ||||||||||| | |||||||| |||||||||||||||||||||||||    
T  21648928 aagaggataatgtgagtatgagagagaaagttgttaaaaagttgtcacaaattggttgtacaaatatca 21648996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 38844807 - 38844860
Alignment:
Q  35 ggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||    
T  38844807 ggagagaaagttatctaaaagttgtcacaaaatggttgtacaaatatcatttct 38844860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 40842064 - 40842015
Alignment:
Q  39 agaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| ||||    
T  40842064 agaaagttgtcaaaaagttatcacaaagtggttgtacaaatatcatttct 40842015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 28623130 - 28623181
Alignment:
Q  37 agagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||| |||||||||||||||| | ||||||||||||||||| ||||    
T  28623130 agagaaagttgtcaaaaagttatcacataatggttgtacaaatatcatttct 28623181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 39021462 - 39021513
Alignment:
Q  37 agagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  39021462 agagagagttgtcaaaaagttatcacaaaatggttgtacaaatatcatttct 39021513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 3650187 - 3650114
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| | | |||  ||||||||||| | ||||| |||| ||||||||||||||||||||||| ||||    
T  3650187 aagaggataatatgagtatgagagagaaagttgttaaaaaattattacaaattggttgtacaaatatcatttct 3650114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 40102097 - 40102024
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||||| |||  ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  40102097 aagagaataatgtaagtatgagagagaaagttgtcaaaaagttgtgaaaaagtggttgtacaaatatcatttct 40102024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 12659105 - 12659053
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||||||||||||||||||||| ||||    
T  12659105 gagagaaagttgtcaaaaagttgttaaaaattggttgtacaaatatcatttct 12659053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 41344687 - 41344739
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||| |||||||||||||||||| || |||||||||||||| ||||    
T  41344687 gagagaaggttgtcaaaaagttatcacaaactgattgtacaaatatcatttct 41344739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 11114672 - 11114739
Alignment:
Q  21 ataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| |||||  ||||||||||| ||||||||||||  |||| ||| ||||||||||||| ||||    
T  11114672 ataatgtgaatatgagagagaaagttgtcaaaaagttattgcaaaatggatgtacaaatatcatttct 11114739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 37873124 - 37873175
Alignment:
Q  37 agagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||| |||||||||||||| ||| ||||| ||||||||||| ||||    
T  37873124 agagaaagttgtcaaaaagttatcataaaatggttttacaaatatcatttct 37873175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 27836232 - 27836186
Alignment:
Q  37 agagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    |||| ||||| |||||||||| ||||||| |||||||||||||||||    
T  27836232 agagtaagttgtcaaaaagttgtcacaaagtggttgtacaaatatca 27836186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 41293739 - 41293801
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattcttttagtaata 98  Q
    ||||||||||| |  ||||||| |||||||||||||||| |||||||| |||| |||| ||||    
T  41293739 gagagaaagttgtacaaaagttgtcacaaattggttgtaaaaatatcatttctcttagaaata 41293801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 7129586 - 7129541
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatat 81  Q
    ||||||||||| || ||||||| ||||||| |||||||||||||||    
T  7129586 gagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatat 7129541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 8841104 - 8841031
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||||||| |||   ||||||| || ||||||| || ||||||| ||||||||||||||||| ||||    
T  8841104 aagatgataatgtaagtatgatagagaaaattgtcaaaaaattctcacaaagtggttgtacaaatatcatttct 8841031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 11879487 - 11879560
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| |||||||||| ||||||| |||  ||||| |||||| ||||    
T  11879487 aagaggataatgtgagtatgagagagaaagttgtcaaaaagttgtcacaaagtggacgtacatatatcatttct 11879560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 11896903 - 11896976
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| |||||||||| ||||||| |||  ||||| |||||| ||||    
T  11896903 aagaggataatgtgagtatgagagagaaagttgtcaaaaagttgtcacaaagtggacgtacatatatcatttct 11896976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 14029240 - 14029313
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | ||   |||||||| || ||||||| ||||||||||||| || ||||||||||| ||||    
T  14029240 aagaggataatgtgagtaaaagagagaaaattgtcaaaaaattatcacaaattgattatacaaatatcatttct 14029313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 20288571 - 20288534
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  20288571 aaaagttgtcacaaattggttgtacaaatatcatttct 20288534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 21075200 - 21075163
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  21075200 aaaagttgtcacaaattggttgtacaaatatcatttct 21075163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 21418589 - 21418662
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| |||||| ||| ||| ||| ||||||||||||||||| ||||    
T  21418589 aagagtataatgtgagtatgagagagaaagttgtcaaaaggttgtcagaaagtggttgtacaaatatcatttct 21418662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 23258085 - 23258040
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatat 81  Q
    ||||||||||| || ||||||| |||||||||| ||||||||||||    
T  23258085 gagagaaagttgtcgaaaagttctcacaaattgattgtacaaatat 23258040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 30943852 - 30943909
Alignment:
Q  31 tattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||||| || |||||||||| | | ||||||||||||||||||||| ||||    
T  30943852 tattagagagaaaattgtcaaaaagttgttaaaaattggttgtacaaatatcatttct 30943909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 32175028 - 32174955
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| ||||||| || ||||||| ||| ||||| ||||||| ||||    
T  32175028 aagaggataatgtgagtatgagagagaaagttgtcaaaaaattgtcacaaagtggatgtacgaatatcatttct 32174955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 39259064 - 39259124
Alignment:
Q  27 taaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||  |||||||||||||  |||| ||||||||||||| |||||||||||||| ||||    
T  39259064 taaatatgagagagaaagttatacaaaa-ttatcacaaattgattgtacaaatatcatttct 39259124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 42716394 - 42716321
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||||| | |||  ||||||||||| ||||||| |||| | ||| ||||||||||||||||| ||||    
T  42716394 aagaagataatgtgagtatgagagagaaagttgtcaaaaaattatgaaaaagtggttgtacaaatatcatttct 42716321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 1065470 - 1065418
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  | ||||| ||||||||||||||||||||||||| ||||    
T  1065470 gagagaaagttgtacagaagttgtcacaaattggttgtacaaatatcatttct 1065418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 1158353 - 1158405
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||||| | ||||||||||||||||||||| ||||    
T  1158353 gagagaaagttgttcaaaagttattagaaattggttgtacaaatatcatttct 1158405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 2621854 - 2621786
Alignment:
Q  21 ataatgtaaatattggagagaaagttatca-aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||| |||  |||| |||||| ||| ||||||||||||||||| |||||| |||||||| ||||    
T  2621854 ataatgtaagtataagagataaagttgtcacaaaagttatcacaaattagttgtataaatatcatttct 2621786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 11223877 - 11223929
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||| ||||| ||||||| ||| ||||||||||||| ||||    
T  11223877 gagagaaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttct 11223929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 12045671 - 12045723
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| |||| || ||||||||||||||||| ||||    
T  12045671 gagagaaagttgtctaaaagttgtcactaaatggttgtacaaatatcatttct 12045723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 14708022 - 14707950
Alignment:
Q  16 agaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| ||||| |||||||   |||||||||||||||||| || ||| |||||| || ||||||||||| ||||    
T  14708022 agagcataatataaatatgaaagagaaagttatcaaaaaattgtcataaattgattctacaaatatcatttct 14707950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 22852857 - 22852909
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||| |||| ||||| ||||||| ||||||||||||||||| ||||    
T  22852857 gagaaaaagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttct 22852909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 29509319 - 29509267
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| |  |||| ||||||||||||||||| ||||    
T  29509319 gagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttct 29509267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 30927949 - 30928001
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  |||| || ||||||||||||||||||||||||| ||||    
T  30927949 gagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcatttct 30928001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 35633987 - 35634039
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| ||| ||| |||||||| |||||||| ||||    
T  35633987 gagagaaagttgtcaaaaagttgtcagaaagtggttgtagaaatatcatttct 35634039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 35937530 - 35937582
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| | ||||| ||||||||||||||||| ||||    
T  35937530 gagagaaagttgtccaaaagttgttacaaaatggttgtacaaatatcatttct 35937582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 36497714 - 36497662
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| ||||||| | ||||||||||||||| ||||    
T  36497714 gagagaaagttgtctaaaagttgtcacaaaatagttgtacaaatatcatttct 36497662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 37343427 - 37343375
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||| |||| |||||||| | | ||||||||||||||| ||||    
T  37343427 gagagaaagttatccaaaaattatcacataatagttgtacaaatatcatttct 37343375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 41273568 - 41273516
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| |||||||||| |||||||||||||| ||||    
T  41273568 gagagaaagttgtacaaaagttgtcacaaattgtttgtacaaatatcatttct 41273516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 42012608 - 42012660
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||||||| ||| | |||||| |||||||| ||||    
T  42012608 gagagaaagttgtcaaaaagttatcataaagtagttgtataaatatcatttct 42012660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 9954622 - 9954549
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||||| |||  ||||||||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  9954622 aagaggataatgtaagtatgagagagaaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttct 9954549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 29383631 - 29383558
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| |||||||||| ||| ||| ||||||||||||||||| ||||    
T  29383631 aagagtataatgtgagtatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttct 29383558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 32457249 - 32457322
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  |||||||| || |||||||||| ||||||| ||||||||||||||||| ||||    
T  32457249 aagagtataatgtgagtatgtgagagaaaattgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 32457322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 237416 - 237468
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| ||||||||| |||||||  ||||||||||||||||| ||||    
T  237416 gagagaaagttgtcaaaaagtaatcacaagatggttgtacaaatatcatttct 237468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 21506410 - 21506342
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    |||| |||||||| | |||  ||||||||||| |||||||||| ||| ||| |||||||||||||||||    
T  21506410 aagaagataatgtgagtatgagagagaaagttgtcaaaaagttgtcaaaaaatggttgtacaaatatca 21506342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 22492045 - 22492097
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||| ||||||||||||| |||||||||| |||||| ||||    
T  22492045 gagagaaagttgtcaagaagttatcacaaaatggttgtacatatatcatttct 22492097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 28965858 - 28965910
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | ||||| ||||||||||||||||| ||||    
T  28965858 gagagaaagttgtcaaaaagttgtaacaaaatggttgtacaaatatcatttct 28965910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 29173040 - 29172996
Alignment:
Q  39 agaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||    
T  29173040 agaaagttattaaaaagttatcataaaatggttgtacaaatatca 29172996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 11785423 - 11785356
Alignment:
Q  21 ataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| |||||  || |||||||| ||||||| || ||||||| ||||||||||||||||| ||||    
T  11785423 ataatgtgaatatgagatagaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttct 11785356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 10521197 - 10521127
Alignment:
Q  18 aggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||| | |||  |||| ||| ||||||||||||||||||||| |  |||||||||||||| ||||    
T  10521197 aggataatgtgagtatgagagataaaattatcaaaaagttatcacaaagtaattgtacaaatatcatttct 10521127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 2056821 - 2056784
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  2056821 aaaagttgtcacaaattggttgtacaaatatcatttct 2056784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 8395416 - 8395343
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  8395416 aagagaataatgtgagtatgagagagaaagttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 8395343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 8778869 - 8778942
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||||| | |||  ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  8778869 aagaagataatgtgagtatgtgagagaaagttgtcaaaaagttgttaaaaaatggttgtacaaatatcatttct 8778942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 32253854 - 32253781
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  |||||||| |||||| ||| |||||| ||| ||||||||||||||||| ||||    
T  32253854 aagagtataatgtgagtatgagagagaaaattatcacaaaattatcaaaaagtggttgtacaaatatcatttct 32253781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 3339517 - 3339569
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| ||||||| ||||||||||||||||| ||||    
T  3339517 gagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttct 3339569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 6435089 - 6435037
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||| || ||||||| ||||||| ||||||||||||||||| ||||    
T  6435089 gagataaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttct 6435037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 15722521 - 15722573
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||| |||||||||| ||||||| || |||||||||||||| ||||    
T  15722521 gagagaaggttgtcaaaaagttgtcacaaaatgattgtacaaatatcatttct 15722573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 19789094 - 19789146
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  19789094 gagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttct 19789146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 23633341 - 23633393
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||||| | ||| |||||||| |||||||| ||||    
T  23633341 gagagaaagttgtcaaaaagttataataaagtggttgtagaaatatcatttct 23633393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 25924882 - 25924934
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| |  |||| ||||||||||||||||| ||||    
T  25924882 gagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttct 25924934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 28883766 - 28883818
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||| ||||| | ||| ||||||||||||||||| ||||    
T  28883766 gagagaaagttgtcaaaaggttattaaaaaatggttgtacaaatatcatttct 28883818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 34570612 - 34570660
Alignment:
Q  36 gagagaaagttatca-aaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||||||||| ||| ||||||||| ||||| |||||||||||||||||    
T  34570612 gagagaaagttgtcacaaaagttattacaaaatggttgtacaaatatca 34570660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 9027947 - 9027874
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  |||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  9027947 aagagaataatgtgagtatgagagagaaagttatcaaaaagttatcacaaagtggttgtacaaatatcatttct 9027874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 22813140 - 22813073
Alignment:
Q  21 ataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||||| |||||||||||| |||||||||| ||| ||| ||||||||||||||||| ||||    
T  22813140 ataatgtgaatatgggagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttct 22813073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 108505 - 108432
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| ||||||| || ||||||| ||||||||||||||||| ||||    
T  108505 aagaggataatgtgagtatgagagagaaagttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttct 108432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 11173508 - 11173459
Alignment:
Q  39 agaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  11173508 agaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcaattct 11173459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 18169231 - 18169158
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| |||||| ||||||  |||||||| || |||||||||| ||||||| ||||||||||||||||| ||||    
T  18169231 aagagaataatgcaaatatgagagagaaatttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 18169158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 14207449 - 14207381
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||| ||||||| | |||  ||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  14207449 aagagtataatgtgagtatgagagagaaagttgtcaaaaggttatcacaaagtggttgtacaaatatca 14207381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 14215197 - 14215129
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||| ||||||| | |||  ||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  14215197 aagagtataatgtgagtatgagagagaaagttgtcaaaaggttatcacaaagtggttgtacaaatatca 14215129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 34271508 - 34271560
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||||| ||||    
T  34271508 gagagaaagttatcaaaaagttgttacaaagtggttgtacaaatatcatttct 34271560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 47849724 - 47849673
Alignment:
Q  37 agagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||| ||||||| |||||||||| ||||||||||||||||| ||||    
T  47849724 agagaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttct 47849673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 32717588 - 32717650
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaa 77  Q
    ||||||||||||||| |||  || |||||||| |||||||||| ||||||| |||||||||||    
T  32717588 aagaggataatgtaagtatgagatagaaagttgtcaaaaagttgtcacaaagtggttgtacaa 32717650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 24537293 - 24537220
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||||| |||  || |||| ||| |||||||||| ||||||| ||| ||||||||||||| ||||    
T  24537293 aagaggataatgtaagtatgagaaagaaggttgtcaaaaagttgtcacaaagtggatgtacaaatatcatttct 24537220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 37303071 - 37303144
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  37303071 aagaggataatgtgagtatgagagagaaagttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 37303144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 462419 - 462471
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| ||||||| ||||||||||||||||| ||||    
T  462419 gagagaaagttgtctaaaagttgtcacaaaatggttgtacaaatatcatttct 462471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 1901944 - 1901996
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| ||||||| ||||||||||||||||| ||||    
T  1901944 gagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttct 1901996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 1911390 - 1911442
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| ||||||| ||||||||||||||||| ||||    
T  1911390 gagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttct 1911442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 5398971 - 5398919
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| ||||||| || ||||||| ||||||||||||||||| ||||    
T  5398971 gagagaaagttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttct 5398919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 20380907 - 20380959
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||| ||||| ||||||| ||||||||||||||||| ||||    
T  20380907 gagagaaagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttct 20380959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 26279937 - 26279885
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| ||| ||| ||||||||||||||||| ||||    
T  26279937 gagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttct 26279885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 31176458 - 31176510
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||| |||||||||| ||||||||||||||||| ||||    
T  31176458 gagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttct 31176510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 32931936 - 32931988
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| ||||||||||||||||||||||||| ||||    
T  32931936 gagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 32931988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 34733312 - 34733356
Alignment:
Q  39 agaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||    
T  34733312 agaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatca 34733356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 36819009 - 36818957
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| ||||||||||||||||||||||||| ||||    
T  36819009 gagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 36818957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 43409380 - 43409432
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||| |||||||||| ||||||||||||||||| ||||    
T  43409380 gagagaaagttttccaaaaattatcacaaagtggttgtacaaatatcatttct 43409432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 48649654 - 48649586
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||||||||||| | |||  ||||||||||| |||||||||| | | ||| |||||||||||||||||    
T  48649654 aagaggataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaagtggttgtacaaatatca 48649586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 51464290 - 51464342
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  51464290 gagataaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 51464342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 25959560 - 25959607
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||||||||| || ||||||||||||||| ||||||| |||||||||    
T  25959560 gagagaaagttgtctaaaagttatcacaaagtggttgtccaaatatca 25959607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 31249319 - 31249378
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgta 74  Q
    |||||||||||||||||||  ||||||||||||| |||||||| ||| ||| || |||||    
T  31249319 aagaggataatgtaaatatgagagagaaagttattaaaaagttgtcaaaaaatgattgta 31249378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 55344315 - 55344366
Alignment:
Q  37 agagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| || |||| ||||||||||||| ||||||||||||||||| ||||    
T  55344315 agagaaaattgtcaagaagttatcacaaaatggttgtacaaatatcatttct 55344366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 20893239 - 20893305
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatat 81  Q
    |||||||||||||  ||||  | || |||||| ||||||| |||||||||| |||||||||||||||    
T  20893239 aagaggataatgtggatatgagggataaagttgtcaaaaaattatcacaaaatggttgtacaaatat 20893305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 8066429 - 8066356
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||| ||| | |||  ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  8066429 aagaggatagtgtgagtatgagagagaaagttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 8066356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 11335299 - 11335372
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||| ||| |||||  ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  11335299 aagaagatattgtgaatatgagagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttct 11335372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 14957910 - 14957837
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| |||||  |||| ||| || | |||||||| ||||||| ||||||||||||||||| ||||    
T  14957910 aagagtataatgtgaatatgagagaaaaaattgttaaaaagttgtcacaaagtggttgtacaaatatcatttct 14957837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 32457752 - 32457825
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| ||| |||||| ||| ||| ||||||||||||||||| ||||    
T  32457752 aagagtataatgtgagtatgagagagaaagttgtcacaaagttgtcaaaaagtggttgtacaaatatcatttct 32457825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 37303457 - 37303384
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| ||||||||||   | ||| ||||||||||||||||| ||||    
T  37303457 aagaggataatgtgagtatgagagagaaagttgtcaaaaagttgcgagaaagtggttgtacaaatatcatttct 37303384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 49196770 - 49196697
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  |||||||| || ||| |||||| ||||||| ||||||||||||||||| ||||    
T  49196770 aagagtataatgtgagtatgagagagaaaattgtcacaaagttgtcacaaaatggttgtacaaatatcatttct 49196697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 51410880 - 51410807
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| |||||   ||||||| || |||||||||| | | ||| ||||||||||||||||| ||||    
T  51410880 aagaggataatgtgaatatgaaagagaaaattgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 51410807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 51672913 - 51672864
Alignment:
Q  39 agaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| |||||||||||||||||| | | ||||||||||||| ||||    
T  51672913 agaaagttgtcaaaaagttatcacaaagtagatgtacaaatatcatttct 51672864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 52727445 - 52727518
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| ||||||| |||||| ||| || |||||||||||||| ||||    
T  52727445 aagagtataatgtgagtatgtgagagaaagttgtcaaaaaattatcataaagtgattgtacaaatatcatttct 52727518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 53473648 - 53473611
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  53473648 aaaagttatcacaaattgattgtacaaatatcatttct 53473611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 1295385 - 1295333
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||| || ||||||||||||||| | ||||||||||||||| ||||    
T  1295385 gagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcatttct 1295333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 3069608 - 3069644
Alignment:
Q  52 aaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  3069608 aaagttgtcacaaattggttgtacaaatatcatttct 3069644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 11327161 - 11327109
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| ||||||| ||||||||||||||||| ||||    
T  11327161 gagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttct 11327109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 12792691 - 12792639
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||| || ||||||| ||||||||||||||||| ||||    
T  12792691 gagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttct 12792639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 19418175 - 19418227
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||| |||||||||| ||| ||| ||||||||||||||||| ||||    
T  19418175 gagagaaggttgtcaaaaagttgtcataaaatggttgtacaaatatcatttct 19418227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 20216001 - 20215949
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||| || ||||||| ||||||||||||||||| ||||    
T  20216001 gagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttct 20215949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 20714296 - 20714244
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  | ||||| ||||||||||||||||||||||||| ||||    
T  20714296 gagagaaagttgtacagaagttgtcacaaattggttgtacaaatatcatttct 20714244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 28300666 - 28300718
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| | |||||||| ||| ||| ||||||||||||||||| ||||    
T  28300666 gagagaaagttgttaaaaagttgtcataaagtggttgtacaaatatcatttct 28300718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 30400174 - 30400226
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| ||||||||| ||||||||||||||| ||||    
T  30400174 gagagaaagttgtacaaaagttgtcacaaatttgttgtacaaatatcatttct 30400226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 32008086 - 32008034
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||||||||||| ||||||||| ||||    
T  32008086 gagagaaagttgtcaaaaagttgttagaaattggttgtgcaaatatcatttct 32008034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 35376569 - 35376621
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||| || ||||||| ||||||||||||||||| ||||    
T  35376569 gagagaaagttgtctaaaaattgtcacaaaatggttgtacaaatatcatttct 35376621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 36869855 - 36869907
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| ||| ||| ||||||||||||||||| ||||    
T  36869855 gagagaaagttgtctaaaagttgtcaaaaaatggttgtacaaatatcatttct 36869907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 41309074 - 41309006
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||||||||||| | |||  |||||||| || | ||||| || ||||||| |||||||||||||||||    
T  41309074 aagaggataatgtgagtatgagagagaaaattgttaaaaaattgtcacaaagtggttgtacaaatatca 41309006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 41348999 - 41349043
Alignment:
Q  39 agaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    |||||||| || |||| |||||||||| |||||||||||||||||    
T  41348999 agaaagttgtctaaaaattatcacaaaatggttgtacaaatatca 41349043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 41877741 - 41877689
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| |  |||| ||||||||||||||||| ||||    
T  41877741 gagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttct 41877689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 42424263 - 42424211
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||| |||||||||||| | ||| |||| |||||||||||||||||    
T  42424263 gagataaagttgtcaaaaagttataataaagtggtcgtacaaatatcaattct 42424211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 43900775 - 43900827
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  43900775 gagagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcatttct 43900827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 44334819 - 44334871
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  44334819 gagagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcatttct 44334871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 47773993 - 47774045
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| ||||||||| ||||||||||||||| ||  ||||||||||||| ||||    
T  47773993 gagataaagttatctaaaagttatcacaaaatgaatgtacaaatatcatttct 47774045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 19426654 - 19426581
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  19426654 aagaggataatgtgagtatgagagagaaagttgtcaaaaagttgtcacaaaatggttgtacaaatatcatttct 19426581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 28824571 - 28824504
Alignment:
Q  21 ataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| |||||  ||||||||||| |||||||||| ||| ||| ||||||||||||||||| ||||    
T  28824571 ataatgtgaatatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttct 28824504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 37173007 - 37173046
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattcttt 90  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  37173007 aaaagttatcacaaattggttgtacaaatatcatttcttt 37173046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 88
Target Start/End: Complemental strand, 384425 - 384364
Alignment:
Q  27 taaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||  |||||||||||||  |||||||||  |||| ||||||||||||||||||||||    
T  384425 taaatataagagagaaagttatataaaagttatatcaaaatggttgtacaaatatcaattct 384364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 6353799 - 6353726
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||| |||||||  ||||||||||||||| ||| || ||| ||| ||||||||||||||||| ||||    
T  6353799 aagagtataatataaatatgagagagaaagttatcacaaaattgtcaaaaaatggttgtacaaatatcatttct 6353726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 9055320 - 9055268
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||||||||||||||||||||| ||||    
T  9055320 gagagaaagttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 9055268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 27164855 - 27164907
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||  ||||||| |||||||||| |||||||||||||| ||||    
T  27164855 gagagaaagttatacaaaagttgtcacaaattgattgtacaaatatcatttct 27164907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 29162297 - 29162349
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||  ||||||| |||||||||| |||||||||||||| ||||    
T  29162297 gagagaaagttatacaaaagttgtcacaaattgattgtacaaatatcatttct 29162349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 30864435 - 30864487
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| ||||||||||||||||||||||||| ||||    
T  30864435 gagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 30864487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 33881723 - 33881775
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||||||||||||||  |||| |||||||| |||||||| ||||    
T  33881723 gagagaaagttatcaaaaagttataccaaaatggttgtataaatatcatttct 33881775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 38023442 - 38023494
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||| |||||||||| ||||||||||||||||| ||||    
T  38023442 gagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttct 38023494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 42060709 - 42060657
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| ||||||||||||  |||| ||||||||||||||||| ||||    
T  42060709 gagagaaagttgtcaaaaagttatagcaaaatggttgtacaaatatcatttct 42060657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 43079650 - 43079702
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||| |||||||||| ||||||||||||||||| ||||    
T  43079650 gagagaaagttgtccaaaaattatcacaaagtggttgtacaaatatcatttct 43079702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 48866948 - 48867000
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| ||||||| ||| ||||||||||||| ||||    
T  48866948 gagagaaagttgtcaaaaagttgtcacaaagtggctgtacaaatatcatttct 48867000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 49069318 - 49069250
Alignment:
Q  21 ataatgtaaatattggagagaaagttatca-aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||  |||||||| |||||| ||||||| ||| ||| ||||||||||||||||| ||||    
T  49069318 ataatgtaaatatgagagagaaaattatcacaaaagttgtcaaaaagtggttgtacaaatatcatttct 49069250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 28596959 - 28596912
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||||||||| | |||||||| ||||||| |||||||||||||||||    
T  28596959 gagagaaagttgtaaaaaagttgtcacaaagtggttgtacaaatatca 28596912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 37325852 - 37325891
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattcttt 90  Q
    ||||||| ||||||||||||||||||||||||| ||||||    
T  37325852 aaaagttgtcacaaattggttgtacaaatatcatttcttt 37325891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 3040462 - 3040420
Alignment:
Q  39 agaaagttatcaaaaagttatcacaaattggttgtacaaatat 81  Q
    ||||||||||  ||||||| |||||||||||||||||||||||    
T  3040462 agaaagttatacaaaagttgtcacaaattggttgtacaaatat 3040420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 31274561 - 31274599
Alignment:
Q  50 aaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  31274561 aaaaagttgtcacaaattggttgtacaaatatcatttct 31274599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 41966382 - 41966328
Alignment:
Q  39 agaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattcttttag 93  Q
    |||||||| ||||||| || ||||||| ||||||||||||||||| |||| ||||    
T  41966382 agaaagttgtcaaaaaattgtcacaaagtggttgtacaaatatcatttctcttag 41966328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 2790251 - 2790178
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| ||||||| || | ||||| ||||||||||||||||| ||||    
T  2790251 aagagtataatgtgagtatgagagagaaagttgtcaaaaaattgttacaaagtggttgtacaaatatcatttct 2790178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 20406591 - 20406542
Alignment:
Q  39 agaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| |||||||||| ||||||  ||||||||||||||||| ||||    
T  20406591 agaaagttgtcaaaaagttgtcacaagatggttgtacaaatatcatttct 20406542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 29763868 - 29763831
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  29763868 aaaagttatcacaaaatggttgtacaaatatcatttct 29763831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 33684754 - 33684681
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| | |||||||| | | ||| ||||||||||||||||| ||||    
T  33684754 aagaggataatgtgagtatgagagagaaagttgtaaaaaagttgtgagaaagtggttgtacaaatatcatttct 33684681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 39369356 - 39369303
Alignment:
Q  35 ggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||||||||||||| | |||||  |||||||||||||||| ||||    
T  39369356 ggagaaaaagttatcaaaaagttgttacaaaagggttgtacaaatatcatttct 39369303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 40842479 - 40842406
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| ||||||  || ||||||| ||| ||||||||||||| ||||    
T  40842479 aagaggataatgtgagtatgagagagaaagttgtcaaaagattgtcacaaagtggatgtacaaatatcatttct 40842406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 2756947 - 2756999
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||| |||||||||| | | ||||||||||||||||||||| ||||    
T  2756947 gagataaagttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 2756999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 4971343 - 4971291
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| ||||||| ||||||||||||||||| ||||    
T  4971343 gagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatcatttct 4971291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 7701376 - 7701332
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaata 80  Q
    ||||||| ||| |||||||||||||| ||| ||||||||||||||    
T  7701376 gagagaaggttgtcaaaaagttatcataaagtggttgtacaaata 7701332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 17500750 - 17500698
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||| |||||||||||| | ||| ||||||||||||||||| ||||    
T  17500750 gagataaagttgtcaaaaagttataataaagtggttgtacaaatatcatttct 17500698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 17552464 - 17552516
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||| |||||||||||| | ||| ||||||||||||||||| ||||    
T  17552464 gagataaagttgtcaaaaagttataataaagtggttgtacaaatatcatttct 17552516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 28081800 - 28081852
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| | ||||| |||| ||||| ||||||||||||||||| ||||    
T  28081800 gagagaaagttgtaaaaaaattattacaaaatggttgtacaaatatcatttct 28081852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 30941231 - 30941179
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||| |||| || | ||||| ||||||||||||||||| ||||    
T  30941231 gagagaaagttatctaaaaattgttacaaagtggttgtacaaatatcatttct 30941179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 33050236 - 33050184
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| ||||||| ||||||||||||||||| ||||    
T  33050236 gagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttct 33050184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 42699110 - 42699058
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||| ||||    
T  42699110 gagagaaagttatcaaaaagttgtcacaaaatggttgtacaaatatcatttct 42699058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 12718383 - 12718450
Alignment:
Q  21 ataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| |||||  |||| |||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  12718383 ataatgtgaatatgagagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttct 12718450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 19376129 - 19376207
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattcttttag 93  Q
    ||||| ||||||| | |||  |||||||||||||||||||||| ||| ||| ||||||||||||||||| |||| ||||    
T  19376129 aagagtataatgtgagtatgagagagaaagttatcaaaaagttgtcagaaagtggttgtacaaatatcatttctcttag 19376207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 40223782 - 40223848
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatat 81  Q
    ||||||||||||| | |||  ||||||||||| |||||||||| ||||||| |||||||||||||||    
T  40223782 aagaggataatgtgagtatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatat 40223848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 125166 - 125093
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||| || ||||||||||||||||||| ||||||| | ||||||||||||||| ||||    
T  125166 aagagaataatgtgagtattagaaagaaagttatcaaaaagttgtcacaaagtagttgtacaaatatcatttct 125093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 34381086 - 34381013
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  34381086 aagagaataatgtgagtatgagagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 34381013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 12779624 - 12779676
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  12779624 gagataaagttgtcaaaaagttgtcacaaattggttgtacaaatatcatttct 12779676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 12910858 - 12910790
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||||||||| ||| ||   |||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  12910858 aagaggataatataagtacaagagagaaaattatcaaaaagttgtcacaaagtggttgtacaaatatca 12910790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 39595325 - 39595273
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  39595325 gagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 39595273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 83
Target Start/End: Complemental strand, 8097301 - 8097255
Alignment:
Q  38 gagaaagttatca-aaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||    
T  8097301 gagaaagttatcacaaaagttatcaaaaattggttgtacaaatatca 8097255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 10232570 - 10232500
Alignment:
Q  18 aggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||| |||||  ||||||||||| |||||| ||||||||||| | | ||||||||||||| ||||    
T  10232570 aggataatgtgaatatgagagagaaagttgtcaaaaggttatcacaaagttgatgtacaaatatcatttct 10232500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 7077363 - 7077412
Alignment:
Q  39 agaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||| ||||    
T  7077363 agaaagttatcaaaaagttgtaacaaaatggttgtacaaatatcatttct 7077412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 14073125 - 14073053
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||||| |||  |||||||| ||||||||| ||| ||||||| ||| ||||||||||||| ||||    
T  14073125 aagaggataatgtaagtatgagagagaaaattatcaaaaggttgtcacaaa-tggatgtacaaatatcatttct 14073053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 9594531 - 9594479
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| ||||||||||||||||||||||||| ||||    
T  9594531 gagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 9594479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 9599746 - 9599798
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| ||||||||||||||||||||||||| ||||    
T  9599746 gagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 9599798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 11464155 - 11464187
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatca 83  Q
    |||||||||||||||||||||||||||||||||    
T  11464155 aaaagttatcacaaattggttgtacaaatatca 11464187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 18449335 - 18449267
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||||||||||| | |||  ||||||||||| | |||||||| ||||||| ||| |||||||||||||    
T  18449335 aagaggataatgtgagtatgagagagaaagttgttaaaaagttgtcacaaagtggatgtacaaatatca 18449267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 30574395 - 30574447
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| ||||||||||||||||||||||||| ||||    
T  30574395 gagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 30574447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 36581483 - 36581535
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||| |||||||||| ||||||||||||||||| ||||    
T  36581483 gagagaaagttgtctaaaaattatcacaaagtggttgtacaaatatcatttct 36581535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 36713196 - 36713248
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||| ||||| ||||||| ||||||||||||||||| ||||    
T  36713196 gagagaaagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttct 36713248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 14914424 - 14914373
Alignment:
Q  37 agagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||| || ||||||| ||||||| ||||||||||||||||| ||||    
T  14914424 agagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttct 14914373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 32873168 - 32873219
Alignment:
Q  37 agagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||| |||||||||| | | ||||||||||||||||||||| ||||    
T  32873168 agagaaagttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 32873219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 38500995 - 38500944
Alignment:
Q  37 agagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||| ||||||| || ||||||| ||||||||||||||||| ||||    
T  38500995 agagaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttct 38500944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 5698349 - 5698391
Alignment:
Q  39 agaaagttatcaaaaagttatcacaaattggttgtacaaatat 81  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||    
T  5698349 agaaagttatctaaaagttattacaaaatggttgtacaaatat 5698391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 12661947 - 12662017
Alignment:
Q  18 aggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||| | |||  ||||||||||| ||||||| || ||||||| ||| ||||||||||||| ||||    
T  12661947 aggataatgtgagtatgagagagaaagttgtcaaaaaattgtcacaaagtggatgtacaaatatcatttct 12662017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 41383386 - 41383424
Alignment:
Q  50 aaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  41383386 aaaaagttatcacaaaatggttgtacaaatatcagttct 41383424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 3263541 - 3263578
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  3263541 aaaagttgtcacaaattggttgtacaaatatcatttct 3263578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 19844326 - 19844379
Alignment:
Q  36 gagagaaagttatca-aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||||| ||||||||||| ||| | ||||||||||||||| ||||    
T  19844326 gagagaaagttatcacaaaagttatcaaaaaatagttgtacaaatatcatttct 19844379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 38010910 - 38010873
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  38010910 aaaagttatcacaaattgattgtacaaatatcatttct 38010873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 6515435 - 6515503
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    |||| |||||||| |||||   |||| ||||| |||||||||| ||||||  |||||||||||||||||    
T  6515435 aagatgataatgtgaatatgatagaggaagttttcaaaaagttgtcacaaggtggttgtacaaatatca 6515503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 7144630 - 7144578
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||||||| ||| ||||||||||||||||| ||||    
T  7144630 gagagaaagttgtttaaaagttatcataaaatggttgtacaaatatcatttct 7144578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 12401245 - 12401193
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| | |||||||| | |||||||| |||||||||||||| ||||    
T  12401245 gagagaaagttgtaaaaaagttgttacaaattgattgtacaaatatcatttct 12401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 19127177 - 19127125
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||| |||| |||| ||||| ||||||| ||||||||||||||||| ||||    
T  19127177 gagagagagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttct 19127125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 22647579 - 22647631
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||||||||||| ||||||||| ||||    
T  22647579 gagagaaagttgtcaaaaagttgttagaaattggttgtgcaaatatcatttct 22647631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 26660429 - 26660481
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||| ||||| ||||||| ||| ||||||||||||| ||||    
T  26660429 gagagaaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttct 26660481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 26932021 - 26932073
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||| ||||| ||||||| ||| ||||||||||||| ||||    
T  26932021 gagagaaagttgtcaagaagttgtcacaaaatggatgtacaaatatcatttct 26932073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 28904044 - 28903992
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| ||||||  ||||||||||||||||| ||||    
T  28904044 gagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcatttct 28903992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 28940439 - 28940387
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| ||||||  ||||||||||||||||| ||||    
T  28940439 gagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcatttct 28940387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 31708423 - 31708371
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  31708423 gagagaaagttgtcaaaaagttgttataaaatggttgtacaaatatcatttct 31708371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 35814490 - 35814454
Alignment:
Q  52 aaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  35814490 aaagttatcacaaaatggttgtacaaatatcatttct 35814454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 36548398 - 36548450
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| ||| |||||| ||||||| ||||| ||||||||||| ||||    
T  36548398 gagagaaagttgtcagaaagttgtcacaaaatggttatacaaatatcatttct 36548450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 39788724 - 39788776
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| ||||| | ||||||||||||||||| ||||    
T  39788724 gagagaaagttgtccaaaagttgtcacataatggttgtacaaatatcatttct 39788776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 12694433 - 12694493
Alignment:
Q  23 aatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||| |||||  |||||||||||||||||||||| ||||||| |||||||||||||||||    
T  12694433 aatgtgaatatgagagagaaagttatcaaaaagttgtcacaaaatggttgtacaaatatca 12694493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 51717285 - 51717352
Alignment:
Q  21 ataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||| |||  || ||||||||||||| ||||| ||||||||||||||||||||||||| ||||    
T  51717285 ataatgtaagtatgagaaagaaagttatcaagaagttgtcacaaattggttgtacaaatatcatttct 51717352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 16004323 - 16004396
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| |||||| ||||||| |||||||||||||| ||| ||| |||||| |||||||||| ||||    
T  16004323 aagagtataatgtgaatattagagagaaggttatcaaaaagttgtcataaagtggttgaacaaatatcatttct 16004396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 1031808 - 1031756
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||||||| ||||    
T  1031808 gagagaaagttgtcaagaagttatcacaaagtggttgtacaaatatcatttct 1031756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 4896518 - 4896570
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  4896518 gagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 4896570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 31240701 - 31240649
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| | |||||||||||||||| ||||||||||||||||| ||||    
T  31240701 gagagaaagttgtaaaaaagttatcacaaagtggttgtacaaatatcatttct 31240649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 35332759 - 35332707
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||||||||| |||||| ||| ||||||||||||||||| ||||    
T  35332759 gagagaaagttatcaaaaaattatcataaagtggttgtacaaatatcatttct 35332707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 23094444 - 23094377
Alignment:
Q  21 ataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||   |||||||||| || ||||||||||||||| || |||||||||||||| ||||    
T  23094444 ataatgtaaatatgaaagagaaagttgtctaaaagttatcacaaaatgattgtacaaatatcatttct 23094377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 169519 - 169572
Alignment:
Q  35 ggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||| || |||||||||| ||||||| ||||||||||||||||| ||||    
T  169519 ggagagaaaattgtcaaaaagttgtcacaaaatggttgtacaaatatcatttct 169572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 11064086 - 11064159
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||| ||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  11064086 aagagcataatgtgagtatgagagagaatgttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 11064159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 34116537 - 34116610
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  |||||||| || |||||||||| ||||||| ||||||||||||||||| ||||    
T  34116537 aagagtataatgtgagtatgagagagaaaattgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 34116610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 46794498 - 46794571
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| |||||||||| ||| ||| ||||||||||||||||| ||||    
T  46794498 aagagtataatgtgagtatgagagagaaagttgtcaaaaagttgtcagaaagtggttgtacaaatatcatttct 46794571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 52392222 - 52392295
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  |||| |||||| |||||||||| ||||||| ||| ||||||||||||| ||||    
T  52392222 aagaggataatgtgagtatgagagataaagttgtcaaaaagttgtcacaaagtggatgtacaaatatcatttct 52392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 53308414 - 53308341
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| |||| |||| |||| ||||||||||| ||||||| ||||||||||||  || ||||||||||| ||||    
T  53308414 aagagaataacgtaagtattagagagaaagttgtcaaaaaattatcacaaattaattatacaaatatcatttct 53308341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 53583125 - 53583198
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  53583125 aagaggataatgtgagtatgagagagaaagttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 53583198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 5208345 - 5208397
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| ||||||||||||||||||||||||| ||||    
T  5208345 gagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttct 5208397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 31804347 - 31804399
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| |||||||||| |||||||||| || |||||||||||||| ||||    
T  31804347 gagagaaaattatcaaaaaattatcacaaagtgattgtacaaatatcatttct 31804399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 36444413 - 36444465
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| | |||||||||||| ||| ||||||||||||||||| ||||    
T  36444413 gagagaaagttgttaaaaagttatcataaaatggttgtacaaatatcatttct 36444465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 38844487 - 38844555
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||| ||||||| |||||  ||||||||||| |||||||||| | | ||| |||||||||||||||||    
T  38844487 aagagaataatgtgaatataagagagaaagttgtcaaaaagttgtgagaaagtggttgtacaaatatca 38844555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 39010155 - 39010207
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||| | |||||||||| ||||||| ||||||||||||||||| ||||    
T  39010155 gagagaaagctgtcaaaaagttgtcacaaaatggttgtacaaatatcatttct 39010207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 44170637 - 44170689
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| ||||||| |||| ||||| ||||||||||||||||| ||||    
T  44170637 gagagaaagttgtcaaaaaattataacaaaatggttgtacaaatatcatttct 44170689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 45548807 - 45548855
Alignment:
Q  41 aaagttatcaaaaagttatcacaaattggttgtacaaatatcaattctt 89  Q
    |||||| ||||||| |||||||||| ||||||||||||||||| |||||    
T  45548807 aaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttctt 45548855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 51318744 - 51318704
Alignment:
Q  48 tcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  51318744 tcaaaaagttatcacaaagtggttgtacaaatatcatttct 51318704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 52669627 - 52669679
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  |||||||||||||||||| |||||||||||||| ||||    
T  52669627 gagagaaagttgtacaaaagttatcacaaattgtttgtacaaatatcatttct 52669679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 55596002 - 55595950
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||||||||||||||||||||| ||||    
T  55596002 gagagaaagttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 55595950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 29525911 - 29525864
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    |||||||||||||||||||||| | | ||| |||||||||||||||||    
T  29525911 gagagaaagttatcaaaaagttgtaataaaatggttgtacaaatatca 29525864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 31221481 - 31221414
Alignment:
Q  21 ataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||| |||  ||||||||||| |  ||||||| |||||||||| |||||||||||||| ||||    
T  31221481 ataatgtaagtatgagagagaaagttgtataaaagttgtcacaaattgattgtacaaatatcatttct 31221414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 33484126 - 33484173
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||||||||| || |||| |||||||||| |||||||||||||||||    
T  33484126 gagagaaagttgtccaaaaattatcacaaaatggttgtacaaatatca 33484173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 51397874 - 51397941
Alignment:
Q  21 ataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||||| ||| |||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  51397874 ataatgtgaatatgggatagaaagttgtcaaaaagttgtaataaagtggttgtacaaatatcatttct 51397941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 52224167 - 52224092
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattcttt 90  Q
    ||||| ||||||| | |||  ||||||||||| ||||||| |||||| ||| ||||||||| ||||||| ||||||    
T  52224167 aagagtataatgtgagtatgtgagagaaagttgtcaaaaaattatcataaagtggttgtactaatatcatttcttt 52224092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 52487287 - 52487334
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    |||||||||||||  |||| |||||||||||| |||||||||||||||    
T  52487287 gagagaaagttatacaaaaattatcacaaattagttgtacaaatatca 52487334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 26885338 - 26885292
Alignment:
Q  42 aagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| ||||||| ||||||| ||||||||||||||||| ||||    
T  26885338 aagttatctaaaagttgtcacaaagtggttgtacaaatatcatttct 26885292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 32408469 - 32408534
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatat 81  Q
    ||||| |||||||||||||    ||||||||| | |||||||||||||||| |||||||||||||||    
T  32408469 aagagtataatgtaaatatgtatgagaaagttgttaaaaagttatcacaaa-tggttgtacaaatat 32408534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 1796404 - 1796367
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  1796404 aaaagttgtcacaaattggttgtacaaatatcatttct 1796367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 7037517 - 7037554
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  7037517 aaaagttgtcacaaattggttgtacaaatatcatttct 7037554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 9162124 - 9162067
Alignment:
Q  31 tattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||||| || |||||||||| ||||||| || |||||||||||||| ||||    
T  9162124 tattagagagaaaattgtcaaaaagttgtcacaaaatgattgtacaaatatcatttct 9162067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 23347849 - 23347776
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  |||||||| || | |||||||| ||||||| ||| ||||||||||||| ||||    
T  23347849 aagaggataatgtgagtatgagagagaaaattgttaaaaagttgtcacaaagtggatgtacaaatatcatttct 23347776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 25523195 - 25523268
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| |||||||||| | | ||| | ||||||||||||||| ||||    
T  25523195 aagaggataatgtgagtatgagagagaaagttgtcaaaaagttgtgagaaaatagttgtacaaatatcatttct 25523268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 44165983 - 44165910
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| ||||||| || || |||| ||||||||||||||||| ||||    
T  44165983 aagagaataatgtgagtatgagagagaaagttgtcaaaaaattgtcgcaaagtggttgtacaaatatcatttct 44165910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 47998668 - 47998595
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||| ||| |||  |||| |||||| |||||||||| | ||||| ||||||||||||||||| ||||    
T  47998668 aagagaataatataagtatgagagaaaaagttgtcaaaaagttgttacaaaatggttgtacaaatatcatttct 47998595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 51039113 - 51039186
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  |||| |||||| |||||||||| ||||||| | ||||||||||||||| ||||    
T  51039113 aagagaataatgtgattatgagagataaagttgtcaaaaagttgtcacaaagtagttgtacaaatatcatttct 51039186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 51296186 - 51296259
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| |||||||||| ||| ||| || |||||||||||||| ||||    
T  51296186 aagagtataatgtgagtatgtgagagaaagttgtcaaaaagttgtcataaagtgattgtacaaatatcatttct 51296259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 51377326 - 51377363
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  51377326 aaaagttgtcacaaattggttgtacaaatatcatttct 51377363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 52632209 - 52632164
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatat 81  Q
    |||||| ||||||||||||||||||| ||| | |||||||||||||    
T  52632209 gagagagagttatcaaaaagttatcataaaatagttgtacaaatat 52632164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 54801036 - 54800999
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  54801036 aaaagttatcacaaagtggttgtacaaatatcatttct 54800999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 55268034 - 55268071
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  55268034 aaaagttgtcacaaattggttgtacaaatatcatttct 55268071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 149305 - 149357
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| ||||||| || | | ||||||||||||||||||||| ||||    
T  149305 gagagaaagttgtcaaaaaattgttagaaattggttgtacaaatatcatttct 149357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 1562554 - 1562606
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  1562554 gagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttct 1562606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 3223042 - 3222990
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| |||||||||| |||||||||||||| ||||    
T  3223042 gagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 3222990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 9032833 - 9032781
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| |||||||||| |||||||||||||| ||||    
T  9032833 gagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 9032781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 12241111 - 12241047
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattcttttagtaataat 100  Q
    ||||||||||| |||||||||| | | ||| | ||||||||||||||| |||| ||| |||||||    
T  12241111 gagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctcttaataataat 12241047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 13267496 - 13267548
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||| || ||||||| ||||||||||||||||| ||||    
T  13267496 gagagaaagttttccaaaatttgtcacaaaatggttgtacaaatatcatttct 13267548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 15596449 - 15596397
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||| |||| |||| ||||| ||||||| ||||||||||||||||| ||||    
T  15596449 gagagagagttgtcaagaagttgtcacaaagtggttgtacaaatatcatttct 15596397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 20632666 - 20632718
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||  ||||||||||| ||| |||||||| |||||||| ||||    
T  20632666 gagagaaagttatgcaaaagttatcaaaaaatggttgtataaatatcatttct 20632718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 27001427 - 27001479
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  | ||||| ||||||||||||||||||||||||| ||||    
T  27001427 gagagaaagttgtacagaagttgtcacaaattggttgtacaaatatcatttct 27001479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 29513714 - 29513766
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| |  |||| ||||||||||||||||| ||||    
T  29513714 gagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttct 29513766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 33438098 - 33438046
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| ||||| |||| || ||||||||||||| ||||||||||| ||||    
T  33438098 gagagaaaattatctaaaaattgtcacaaattggttttacaaatatcatttct 33438046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 34616403 - 34616359
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaata 80  Q
    ||||||| ||| |||||||||||||| ||| ||||||||||||||    
T  34616403 gagagaaggttgtcaaaaagttatcataaagtggttgtacaaata 34616359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 36812421 - 36812473
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| | | ||||||||||||||||||||| ||||    
T  36812421 gagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttct 36812473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 38382164 - 38382120
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaata 80  Q
    ||||||| ||| |||||||||||||| ||| ||||||||||||||    
T  38382164 gagagaaggttgtcaaaaagttatcataaagtggttgtacaaata 38382120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 39241324 - 39241360
Alignment:
Q  52 aaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  39241324 aaagttgtcacaaattggttgtacaaatatcatttct 39241360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 43358666 - 43358614
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| | | ||||||||||||||||||||| ||||    
T  43358666 gagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttct 43358614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 44368220 - 44368272
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| |||||||||| |||||||||||||| ||||    
T  44368220 gagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 44368272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 46566982 - 46566930
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| ||||||| ||| ||||||||||||| ||||    
T  46566982 gagagaaagttgtctaaaagttgtcacaaagtggatgtacaaatatcatttct 46566930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 47105964 - 47105912
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  |||||||||||||||||  |||||||||||||| ||||    
T  47105964 gagagaaagttgtacaaaagttatcacaaattaattgtacaaatatcatttct 47105912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 48402358 - 48402402
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaata 80  Q
    ||||||| ||| |||||||||||||| ||| ||||||||||||||    
T  48402358 gagagaaggttgtcaaaaagttatcataaagtggttgtacaaata 48402402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 49424838 - 49424890
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | |||||  |||||||||||||||| ||||    
T  49424838 gagagaaagttgtcaaaaagttgttacaaaaaggttgtacaaatatcatttct 49424890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 50721763 - 50721815
Alignment:
Q  37 agagaaagttatca-aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||| ||||||| ||| ||||||||||| ||||||||| ||||    
T  50721763 agagaaagttatcacaaaagttgtcaaaaattggttgttcaaatatcatttct 50721815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 51224856 - 51224908
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| |  |||| ||||||||||||||||| ||||    
T  51224856 gagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttct 51224908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 56025309 - 56025257
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| |  |||| ||||||||||||||||| ||||    
T  56025309 gagagaaagttgtcaaaaagttgtagcaaaatggttgtacaaatatcatttct 56025257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 56364278 - 56364322
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaata 80  Q
    ||||||| ||| |||||||||||||| ||| ||||||||||||||    
T  56364278 gagagaaggttgtcaaaaagttatcataaagtggttgtacaaata 56364322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 219661 - 219734
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| |||||  || |||||||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  219661 aagagtataatgtgaatataagaaagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 219734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 18648 - 18596
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||||||||||||||||||||||||||||| ||||    
T  18648 gagagaaagttgtacaaaagttatcacaaattggttgtacaaatatcatttct 18596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000007; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 27352683 - 27352631
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||||||||||| ||||||||||||||||| ||||    
T  27352683 gagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcatttct 27352631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 50226897 - 50226949
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  50226897 gagagaaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 50226949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 45740547 - 45740614
Alignment:
Q  21 ataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| |||||  |||| |||| |||||||||||| ||||||| ||||||||||||||||| ||||    
T  45740547 ataatgtgaatatgagagaaaaagctatcaaaaagttgtcacaaagtggttgtacaaatatcatttct 45740614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 366731 - 366658
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| |||||||||||||| ||| |||||||| |||||||| ||||    
T  366731 aagagtataatgtgagtatgagagagaaagttgtcaaaaagttatcagaaagtggttgtataaatatcatttct 366658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 18541048 - 18541121
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||||| |||||  ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  18541048 aagaagataatgtgaatatgagagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttct 18541121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 36690569 - 36690642
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| ||||||| || | | ||||||||||||||||||||| ||||    
T  36690569 aagaggataatgtgagtatgagagagaaagttgtcaaaaaattgtgagaaattggttgtacaaatatcatttct 36690642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 36706670 - 36706743
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| ||||||| || | | ||||||||||||||||||||| ||||    
T  36706670 aagaggataatgtgagtatgagagagaaagttgtcaaaaaattgtgagaaattggttgtacaaatatcatttct 36706743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 26501348 - 26501296
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||||| ||||| ||||||||||||||||| ||||    
T  26501348 gagagaaagttgtccaaaagttattacaaaatggttgtacaaatatcatttct 26501296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 27810265 - 27810317
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||||||||||||||||||||| ||||    
T  27810265 gagagaaagttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 27810317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 43457837 - 43457889
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||||||||| |||| ||||||||||||||||| ||||    
T  43457837 gagagaaagttgtccaaaagttatcgcaaaatggttgtacaaatatcatttct 43457889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 3606113 - 3606164
Alignment:
Q  37 agagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||| |||||||||| | | ||||||||||||||||||||| ||||    
T  3606113 agagaaagttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 3606164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 14247717 - 14247670
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    ||||||||||| ||||||| |||||||||| | |||||||||||||||    
T  14247717 gagagaaagttgtcaaaaaattatcacaaagtcgttgtacaaatatca 14247670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 48576523 - 48576570
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    |||||||||||||||||||||| ||| ||| ||||| |||||||||||    
T  48576523 gagagaaagttatcaaaaagttgtcataaaatggttatacaaatatca 48576570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 50777441 - 50777508
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattcttttagtaataataga 103  Q
    |||||||||||||| |||| || || || | ||||||||||||||||| |||| |||| |||||||||    
T  50777441 gagagaaagttatccaaaaattgtcgcataatggttgtacaaatatcacttctcttaggaataataga 50777508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 25302663 - 25302713
Alignment:
Q  38 gagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||| ||| ||||||| ||||||||||||||||| ||||    
T  25302663 gagaaagttattaaaaggttgtcacaaagtggttgtacaaatatcatttct 25302713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 30439321 - 30439251
Alignment:
Q  18 aggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||| | |||  |||| |||||| ||||||| || ||| ||||||||||||||||||||| ||||    
T  30439321 aggataatgtgagtatgagagataaagttgtcaaaaaattgtcataaattggttgtacaaatatcatttct 30439251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 15061919 - 15061846
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||||| | |||  |||||||| || |||||||||| ||||||| ||||| ||||||||||| ||||    
T  15061919 aagatgataatgtgagtatgagagagaaaattgtcaaaaagttgtcacaaagtggttatacaaatatcatttct 15061846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 20288357 - 20288410
Alignment:
Q  36 gagagaaagttatc-aaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||||||| ||||||||||| ||||||||||||| ||||    
T  20288357 gagagaaagttgtctaaaaagttgtcacaaattggatgtacaaatatcatttct 20288410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 28253089 - 28253016
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  |||||||| || |||||||||| | | ||| ||||||||||||||||| ||||    
T  28253089 aagaggataatgtgagtatgagagagaaaattgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 28253016  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 31436894 - 31436821
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  |||||||| || |||||||||| | | ||| ||||||||||||||||| ||||    
T  31436894 aagaggataatgtgagtatgagagagaaaattgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 31436821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 39010888 - 39010815
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| |||||||||| | | ||| ||| ||||||||||||| ||||    
T  39010888 aagaggataatgtgagtatgagagagaaagttgtcaaaaagttgtgagaaagtggctgtacaaatatcatttct 39010815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 48872948 - 48873020
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| || ||||||| ||||||| |||||||| |||||||| ||||    
T  48872948 aagaggataatgtgagtatgagagagaaagttctc-aaaagttgtcacaaagtggttgtataaatatcatttct 48873020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 52715031 - 52714978
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattctt 89  Q
    ||||||||||| | |||||||| ||||||| || |||||||||||||| |||||    
T  52715031 gagagaaagttgtaaaaaagttgtcacaaaatgattgtacaaatatcatttctt 52714978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 3919353 - 3919301
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||| |||| ||||| ||||||||||||||||| ||||    
T  3919353 gagagaaagttgtccaaaaattataacaaaatggttgtacaaatatcatttct 3919301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 13813611 - 13813559
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  | ||||| ||||||||||||||||||||||||| ||||    
T  13813611 gagagaaagttgtacagaagttgtcacaaattggttgtacaaatatcatttct 13813559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 16658491 - 16658439
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| ||||||  ||||||||||||||||| ||||    
T  16658491 gagagaaagttgtctaaaagttgtcacaatgtggttgtacaaatatcatttct 16658439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 18610826 - 18610774
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| | |||||||| ||||||| | ||||||||||||||| ||||    
T  18610826 gagagaaagttgtaaaaaagttgtcacaaaatagttgtacaaatatcatttct 18610774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 21433418 - 21433482
Alignment:
Q  36 gagagaaagttatca-aaaagttatcacaaattggttgtacaaatatcaattcttttagtaataa 99  Q
    ||||||||||| ||| ||||||| | ||||| ||||||||||||||||| |||| |||| |||||    
T  21433418 gagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctcttagaaataa 21433482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 29489377 - 29489429
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |   |||||||||||||| ||||||||||||||||| ||||    
T  29489377 gagagaaagttgtaccaaagttatcacaaaatggttgtacaaatatcatttct 29489429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 30530592 - 30530644
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| ||||||| |||||||| |||||||| ||||    
T  30530592 gagagaaagttgtctaaaagttgtcacaaaatggttgtataaatatcatttct 30530644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 39669855 - 39669807
Alignment:
Q  40 gaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||||||| || ||||||| ||||||||||||||||| ||||    
T  39669855 gaaagttgtcaaaaaattgtcacaaaatggttgtacaaatatcatttct 39669807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 46907049 - 46907005
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaata 80  Q
    ||||||| ||| |||||||||||||| ||| ||||||||||||||    
T  46907049 gagagaaggttgtcaaaaagttatcataaagtggttgtacaaata 46907005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 49621416 - 49621364
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||| |||| ||||| ||||||||||||||||| ||||    
T  49621416 gagagaaagttgtctaaaaattattacaaaatggttgtacaaatatcatttct 49621364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 50035554 - 50035602
Alignment:
Q  35 ggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    |||||||||||| |  ||||||| ||||||| |||||||||||||||||    
T  50035554 ggagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatca 50035602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 26321727 - 26321770
Alignment:
Q  48 tcaaaaagttatcacaaattggttgtacaaatatcaattctttt 91  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  26321727 tcaaaaagttatcacaaaatggttgtacaaatatcatttctttt 26321770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 26321895 - 26321938
Alignment:
Q  48 tcaaaaagttatcacaaattggttgtacaaatatcaattctttt 91  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  26321895 tcaaaaagttatcacaaaatggttgtacaaatatcatttctttt 26321938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 39247483 - 39247533
Alignment:
Q  38 gagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||| |||||||||||||||||| ||||||||||||||||| ||||    
T  39247483 gagagagttgtcaaaaagttatcacaaaatggttgtacaaatatcatttct 39247533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 6365260 - 6365187
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| |||||  |||||||| || ||||||| || ||||||| ||||||||||||||||| ||||    
T  6365260 aagagtataatgtgaatatgtgagagaaaattgtcaaaaaattgtcacaaagtggttgtacaaatatcatttct 6365187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 13711135 - 13711062
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| ||| |||||||||| ||| ||||||||||||||||| ||||    
T  13711135 aagagtataatgtgagtatgagagagaaagttgtcacaaagttatcaaaaagtggttgtacaaatatcatttct 13711062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 23880169 - 23880096
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  |||||||||||||||||||||| | | ||| ||||||||||||||||| ||||    
T  23880169 aagagaataatgtgagtatgagagagaaagttatcaaaaagttgtgagaaagtggttgtacaaatatcatttct 23880096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 33030120 - 33030177
Alignment:
Q  36 gagagaaagttatcaaaaagttatcac-aaattggttgtacaaatatcaattctttta 92  Q
    ||||||||||| ||||||| ||||||| |||| |||||||||||||||| ||||||||    
T  33030120 gagagaaagttgtcaaaaaattatcacaaaatgggttgtacaaatatcatttctttta 33030177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 36435755 - 36435682
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| | |||||||| ||||||| ||||||||||||||||| ||||    
T  36435755 aagagtataatgtgagtatgtgagagaaagttgttaaaaagttgtcacaaagtggttgtacaaatatcatttct 36435682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 3091794 - 3091742
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| || |||||||||||||||||| | ||||||||||||||| ||||    
T  3091794 gagagaaaattgtcaaaaagttatcacaaaatagttgtacaaatatcatttct 3091742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 5067664 - 5067716
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||||||||||| ||||||| | | ||||||||||||| ||||    
T  5067664 gagagaaagttatcaaaaagttgtcacaaagtagatgtacaaatatcatttct 5067716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 5954501 - 5954553
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||||||||| | ||||||||||||||||| ||||    
T  5954501 gagagaaagttgtccaaaagttatcacataatggttgtacaaatatcatttct 5954553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 6884963 - 6884911
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||||||||||||| ||||||||||||||| ||||    
T  6884963 gagagaaagttgtataaaagttatcacaaattagttgtacaaatatcatttct 6884911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 12600101 - 12600049
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| ||| ||| |||||||||| ||||||||||||||||| ||||    
T  12600101 gagagaaagttgtcacaaaattatcacaaagtggttgtacaaatatcatttct 12600049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 14140355 - 14140407
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||| |||| |||||||||| ||||||||| ||||||||||||||| ||||    
T  14140355 gagagatagttgtcaaaaagttgtcacaaattagttgtacaaatatcatttct 14140407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 14797668 - 14797720
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||||||||||||||||||||| ||||    
T  14797668 gagagaaagttgtcaaaaagttgttagaaattggttgtacaaatatcatttct 14797720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 29893663 - 29893611
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||||||||||||| ||||||||||||||| ||||    
T  29893663 gagagaaagttgtacaaaagttatcacaaattagttgtacaaatatcatttct 29893611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 30856860 - 30856808
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| ||||||| ||||||||||||||||| ||||    
T  30856860 gagagaaagttgtctaaaagttgtcacaaagtggttgtacaaatatcatttct 30856808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 36582312 - 36582260
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| ||||| ||||||| |||||||| |||||||||||||||| ||||    
T  36582312 gagagaaaattatctaaaagttgtcacaaatgggttgtacaaatatcatttct 36582260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 36909861 - 36909913
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| ||||||| ||||||||||||||||| ||||    
T  36909861 gagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttct 36909913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 41715438 - 41715490
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||||||||| |||| |||||| |||||||| ||||||| ||||    
T  41715438 gagagaaagttatcaaaaaattattacaaatcggttgtactaatatcatttct 41715490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 43356342 - 43356290
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||| |||||||||| | | ||||||||||||||||||||||||||    
T  43356342 gagataaagttgtcaaaaagttgttagaaattggttgtacaaatatcaattct 43356290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 4738591 - 4738642
Alignment:
Q  37 agagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| ||||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  4738591 agaggaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 4738642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 13104563 - 13104480
Alignment:
Q  5 gagtgagatgaagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||  ||||||||||||||| |||  ||||||||||| ||||||||||   | ||| ||||||||| ||||||| ||||    
T  13104563 gagtgagaataagaggataatgtaagtatgagagagaaagttgtcaaaaagttgagagaaagtggttgtacgaatatcatttct 13104480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 33296090 - 33296141
Alignment:
Q  37 agagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| ||||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  33296090 agaggaagttgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 33296141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 39454257 - 39454304
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatca 83  Q
    |||||||| ||||||||||||| ||||||| ||||| |||||||||||    
T  39454257 gagagaaaattatcaaaaagttgtcacaaaatggttatacaaatatca 39454304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 9202513 - 9202587
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattctt 89  Q
    ||||||||||||| |||||   |||||||||| ||||||| || ||| ||| |||||||| |||||||| |||||    
T  9202513 aagaggataatgtgaatatgaaagagaaagttgtcaaaaaattgtcataaaatggttgtagaaatatcatttctt 9202587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 37966406 - 37966368
Alignment:
Q  50 aaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  37966406 aaaaagttgtcacaaattggttgtacaaatatcatttct 37966368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 1889221 - 1889148
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| ||||||| || ||| ||| ||||||||||||||||| ||||    
T  1889221 aagagtataatgtgagtatgagagagaaagttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttct 1889148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 5455450 - 5455523
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||||| | |||  ||||||||||| |||||| ||| ||||||| ||| ||||||||||||| ||||    
T  5455450 aagaagataatgtgagtataagagagaaagttgtcaaaaggttgtcacaaagtggatgtacaaatatcatttct 5455523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 30487502 - 30487539
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  30487502 aaaagttgtcacaaattggttgtacaaatatcatttct 30487539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 31635807 - 31635880
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||||| | |||  ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  31635807 aagaagataatgtgagtatgagagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttct 31635880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 32688541 - 32688614
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| ||||||| || ||| ||| ||||||||||||||||| ||||    
T  32688541 aagagtataatgtgagtatgagagagaaagttgtcaaaaaattgtcagaaagtggttgtacaaatatcatttct 32688614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 32750072 - 32749999
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||| ||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  32750072 aagaggataatgtgagtatcagagggaaagttgtcaaaaagttgtgaaaaagtggttgtacaaatatcatttct 32749999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 41353494 - 41353567
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| | ||||| |||||| |||||| |||||||||||||| ||||    
T  41353494 aagagtataatgtgagtatgagagagaaagttgttaaaaaattatcataaattgattgtacaaatatcatttct 41353567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 2308340 - 2308392
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||| |||||| ||| ||| ||||||||||||||||||||| ||||    
T  2308340 gagataaagttgtcaaaaggttgtcaaaaattggttgtacaaatatcatttct 2308392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 3196105 - 3196157
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| |||||||||| |||||||||||||| ||||    
T  3196105 gagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 3196157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 4432367 - 4432315
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||| ||||||||||   |||||||||||||||| ||||    
T  4432367 gagagaaagttgtcaaaaggttatcacaagagggttgtacaaatatcatttct 4432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 7498009 - 7498061
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  7498009 gagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttct 7498061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 10687994 - 10687942
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| |||||||||| |||||||||||||| ||||    
T  10687994 gagagaaagttgtataaaagttgtcacaaattgtttgtacaaatatcatttct 10687942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 11229339 - 11229391
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||| ||||| ||||||| ||| ||||||||||||| ||||    
T  11229339 gagagaaagttgtcaagaagttgtcacaaagtggatgtacaaatatcatttct 11229391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 13553200 - 13553148
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| || || |||| |||||||||| ||||||||||||||||| ||||    
T  13553200 gagagaaaattgtccaaaaattatcacaaagtggttgtacaaatatcatttct 13553148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 15283268 - 15283320
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || |||| || ||||||| ||||||||||||||||| ||||    
T  15283268 gagagaaagttgtctaaaaattgtcacaaagtggttgtacaaatatcatttct 15283320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 23048101 - 23048153
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||  |||| ||||| ||||||| |||||||||||||| ||||    
T  23048101 gagagaaagttatacaaaaattatctcaaattgattgtacaaatatcatttct 23048153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 25270808 - 25270852
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaata 80  Q
    ||||||| ||| |||||||||||||| ||| ||||||||||||||    
T  25270808 gagagaaggttgtcaaaaagttatcataaagtggttgtacaaata 25270852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 25801836 - 25801872
Alignment:
Q  52 aaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  25801836 aaagttgtcacaaattggttgtacaaatatcatttct 25801872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 27307249 - 27307301
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  ||||||| |||||||||| |||||||||||||| ||||    
T  27307249 gagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttct 27307301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 31296863 - 31296915
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||| |||||| |||||| ||| ||||||| ||||||||||||||||| ||||    
T  31296863 gagataaagttgtcaaaacgttgtcacaaaatggttgtacaaatatcatttct 31296915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 34144569 - 34144621
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  |||| || ||||||||||||||||||||||||| ||||    
T  34144569 gagagaaagttgtacaaaaattgtcacaaattggttgtacaaatatcatttct 34144621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 34249633 - 34249581
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  34249633 gagagaaagttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttct 34249581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 34442166 - 34442114
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||| ||| ||||||| |||||| ||| ||||||||||||||||| ||||    
T  34442166 gagagaatgttgtcaaaaaattatcataaagtggttgtacaaatatcatttct 34442114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 39737704 - 39737756
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| | | ||||||||||||||||||||| ||||    
T  39737704 gagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttct 39737756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 4365 - 4316
Alignment:
Q  39 agaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||| ||||    
T  4365 agaaagttgtcaaaaagttatcataaaatggttgtacaaatatcatttct 4316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 6891 - 6818
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| |||||||||| ||| |||||| |||| ||||||||| ||||    
T  6891 aagaggataatgtgagtatgagagagaaagttgtcaaaaagttgtcataaattgattgtccaaatatcatttct 6818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 113699 - 113626
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| | |||||||| ||||||| ||||||||||||||||| ||||    
T  113699 aagagtataatgtgagtatgtgagagaaagttgttaaaaagttgtcacaaagtggttgtacaaatatcatttct 113626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 36076 - 36003
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||| ||||||| | |||  ||||||||||| ||||||| |||||||||| | ||||||||||||||| ||||    
T  36076 aagagaataatgtgagtataagagagaaagttgtcaaaaaattatcacaaagtagttgtacaaatatcatttct 36003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 88846 - 88809
Alignment:
Q  51 aaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  88846 aaaagttatcacaaattggttgtacaaatatcatttct 88809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 337171 - 337119
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||||||||  ||||||| ||| ||| ||||||||||||||||| ||||    
T  337171 gagagaaagttattcaaaagttgtcagaaaatggttgtacaaatatcatttct 337119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 15552 - 15604
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| || |||||||||| ||||||| ||||||||||||||||| ||||    
T  15552 gagagaaaattgtcaaaaagttgtcacaaagtggttgtacaaatatcatttct 15604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 27413 - 27340
Alignment:
Q  15 aagaggataatgtaaatattggagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||| | |||  ||||||||||| ||||||| || ||||||| ||| |||||| |||||| ||||    
T  27413 aagaggataatgtgagtatgagagagaaagttgtcaaaaaattgtcacaaaatggatgtacatatatcatttct 27340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 16612 - 16664
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| ||||| ||||||| | ||||| ||||||||||||||||| ||||    
T  16612 gagagaaaattatctaaaagttgttacaaaatggttgtacaaatatcatttct 16664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 25755 - 25704
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||||||||||| || ||| ||| ||||||||||||||||| ||||    
T  25755 gagagaaagttatcaaaaa-ttgtcataaagtggttgtacaaatatcatttct 25704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 56232 - 56180
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    |||||||| ||||| ||||||| | ||||| ||||||||||||||||| ||||    
T  56232 gagagaaaattatctaaaagttgttacaaaatggttgtacaaatatcatttct 56180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 72187 - 72239
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| || ||||||| | ||||| ||||||||||||||||| ||||    
T  72187 gagagaaagttgtctaaaagttgttacaaaatggttgtacaaatatcatttct 72239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 155959 - 155907
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |||||||||| | | ||| ||||||||||||||||| ||||    
T  155959 gagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttct 155907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 249160 - 249212
Alignment:
Q  36 gagagaaagttatcaaaaagttatcacaaattggttgtacaaatatcaattct 88  Q
    ||||||||||| |  |||||||||||||||||| |||| ||||||||| ||||    
T  249160 gagagaaagttgtacaaaagttatcacaaattgattgtgcaaatatcatttct 249212  T

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