View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3655_low_7 (Length: 254)
Name: NF3655_low_7
Description: NF3655
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3655_low_7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 16 - 254
Target Start/End: Original strand, 43635719 - 43635958
Alignment:
| Q |
16 |
ggtaaagcaggtgaacatcttctcaagagctgaagaaagttccatatagttgtcgtaggtcttgagatcaacctttctgagataaggagcaccatccata |
115 |
Q |
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| T |
43635719 |
ggtaaagcaggtgaacatcttctcaagagctgaagaaagttccatatagttgttgtaggtcttgagatcaacctttctgagataaggagcaccatccata |
43635818 |
T |
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| Q |
116 |
ctcacttttacatagagacagtcaaatcctggttttccctcagcttcatcattgttctttgtcaaatttgacgccatcgtgttctttcgaaatgatcgaa |
215 |
Q |
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| T |
43635819 |
ctcacttttacatagagacagtcaaattctggttttccctcagcttcatcattgttctttgtcaaatttgacgccatcgtgttctttcgaaacgatcgaa |
43635918 |
T |
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| Q |
216 |
ttggt-gccatcccacaacctgtgccctattacagaagtt |
254 |
Q |
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| T |
43635919 |
ttggtggccatcccacaacctgtgccctattacagaagtt |
43635958 |
T |
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