View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3657_high_5 (Length: 315)

Name: NF3657_high_5
Description: NF3657
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3657_high_5
NF3657_high_5
[»] chr6 (42 HSPs)
chr6 (32-302)||(16462652-16462922)
chr6 (36-249)||(24718797-24719010)
chr6 (36-256)||(24728603-24728814)
chr6 (36-288)||(18172049-18172301)
chr6 (36-266)||(23006094-23006316)
chr6 (36-266)||(23782050-23782272)
chr6 (32-288)||(25930352-25930608)
chr6 (32-288)||(7811890-7812145)
chr6 (36-256)||(19875714-19875935)
chr6 (36-289)||(17445673-17445926)
chr6 (41-252)||(17867459-17867661)
chr6 (41-252)||(17877242-17877444)
chr6 (36-286)||(30451553-30451803)
chr6 (37-286)||(10704567-10704807)
chr6 (40-288)||(32335714-32335954)
chr6 (32-283)||(19625686-19625938)
chr6 (32-288)||(21034872-21035129)
chr6 (32-157)||(17927667-17927793)
chr6 (32-286)||(12347967-12348227)
chr6 (32-130)||(23296601-23296699)
chr6 (32-200)||(25592496-25592663)
chr6 (37-256)||(23231069-23231283)
chr6 (180-288)||(24398683-24398791)
chr6 (180-288)||(13145156-13145265)
chr6 (32-286)||(26185590-26185842)
chr6 (37-130)||(13144886-13144979)
chr6 (221-288)||(18026782-18026849)
chr6 (36-100)||(19623861-19623925)
chr6 (36-103)||(15551866-15551933)
chr6 (36-101)||(21235006-21235071)
chr6 (36-106)||(25593950-25594020)
chr6 (36-101)||(19470553-19470618)
chr6 (37-113)||(18026917-18026993)
chr6 (37-101)||(26943459-26943523)
chr6 (36-101)||(9717725-9717790)
chr6 (36-101)||(18435438-18435503)
chr6 (36-101)||(20112902-20112967)
chr6 (36-101)||(20488120-20488185)
chr6 (36-101)||(24116710-24116775)
chr6 (36-101)||(32544147-32544212)
chr6 (36-100)||(20730907-20730971)
chr6 (35-71)||(20890914-20890950)
[»] chr7 (35 HSPs)
chr7 (32-286)||(13172382-13172636)
chr7 (32-288)||(7487934-7488188)
chr7 (36-288)||(5035261-5035504)
chr7 (36-288)||(16307756-16307998)
chr7 (32-130)||(14304384-14304482)
chr7 (35-288)||(16411870-16412124)
chr7 (141-288)||(9064203-9064349)
chr7 (32-288)||(18361610-18361856)
chr7 (116-256)||(18047895-18048026)
chr7 (36-101)||(13018720-13018785)
chr7 (36-104)||(9064355-9064423)
chr7 (181-288)||(16105022-16105130)
chr7 (36-107)||(2913817-2913888)
chr7 (36-101)||(13034057-13034122)
chr7 (36-101)||(16310122-16310187)
chr7 (52-113)||(18056457-18056518)
chr7 (36-101)||(13302689-13302754)
chr7 (36-101)||(15088427-15088492)
chr7 (36-101)||(28408917-28408982)
chr7 (36-94)||(14426425-14426483)
chr7 (36-101)||(2499916-2499981)
chr7 (36-101)||(4494455-4494520)
chr7 (36-101)||(9069440-9069505)
chr7 (36-105)||(10254541-10254610)
chr7 (36-101)||(10883388-10883453)
chr7 (36-101)||(13138110-13138175)
chr7 (36-101)||(13879982-13880047)
chr7 (44-105)||(19237252-19237313)
chr7 (36-101)||(21692165-21692230)
chr7 (36-101)||(21695279-21695344)
chr7 (36-105)||(25807264-25807333)
chr7 (36-101)||(41842488-41842553)
chr7 (36-101)||(44466941-44467006)
chr7 (36-100)||(11792785-11792849)
chr7 (228-272)||(39284606-39284650)
[»] chr1 (32 HSPs)
chr1 (36-288)||(23054247-23054499)
chr1 (36-256)||(18129999-18130210)
chr1 (37-288)||(26280007-26280256)
chr1 (37-298)||(18517108-18517360)
chr1 (32-150)||(20909284-20909403)
chr1 (32-283)||(17018456-17018707)
chr1 (32-156)||(18614778-18614903)
chr1 (36-286)||(20109897-20110150)
chr1 (139-288)||(21683141-21683280)
chr1 (181-256)||(16869988-16870064)
chr1 (36-166)||(9346652-9346782)
chr1 (180-288)||(9346779-9346884)
chr1 (190-288)||(1090490-1090590)
chr1 (35-157)||(18896673-18896796)
chr1 (36-107)||(20954601-20954672)
chr1 (36-101)||(2268412-2268477)
chr1 (36-101)||(22201870-22201935)
chr1 (32-105)||(26703433-26703506)
chr1 (36-107)||(1577748-1577819)
chr1 (36-107)||(19717405-19717476)
chr1 (36-99)||(22427493-22427556)
chr1 (245-288)||(24227931-24227974)
chr1 (36-98)||(1900226-1900288)
chr1 (36-74)||(19170495-19170533)
chr1 (36-102)||(22153738-22153804)
chr1 (36-94)||(29215678-29215736)
chr1 (36-74)||(39201151-39201189)
chr1 (36-101)||(12624690-12624755)
chr1 (36-101)||(22464943-22465008)
chr1 (36-101)||(23036663-23036728)
chr1 (36-101)||(38282448-38282513)
chr1 (36-100)||(21028675-21028739)
[»] chr8 (34 HSPs)
chr8 (36-288)||(18557894-18558146)
chr8 (36-288)||(17916849-17917101)
chr8 (81-275)||(18772540-18772734)
chr8 (37-288)||(19505467-19505716)
chr8 (32-156)||(26832907-26833032)
chr8 (180-284)||(12193920-12194024)
chr8 (180-284)||(12438348-12438452)
chr8 (36-101)||(16681515-16681580)
chr8 (32-101)||(19956549-19956618)
chr8 (37-131)||(1209931-1210026)
chr8 (36-107)||(39693409-39693480)
chr8 (231-288)||(1208651-1208709)
chr8 (32-74)||(22461876-22461918)
chr8 (36-100)||(16207180-16207244)
chr8 (36-101)||(21932757-21932822)
chr8 (36-101)||(43644770-43644835)
chr8 (224-288)||(12541691-12541755)
chr8 (36-84)||(25850233-25850281)
chr8 (180-234)||(1209838-1209893)
chr8 (245-288)||(23772454-23772497)
chr8 (36-107)||(29693189-29693260)
chr8 (36-102)||(30421640-30421706)
chr8 (37-94)||(12193788-12193845)
chr8 (37-94)||(12438216-12438273)
chr8 (36-101)||(12757975-12758040)
chr8 (36-101)||(16188858-16188923)
chr8 (36-101)||(17442019-17442084)
chr8 (36-101)||(17701614-17701679)
chr8 (36-101)||(19943109-19943174)
chr8 (36-101)||(20382606-20382671)
chr8 (36-101)||(23185439-23185504)
chr8 (36-101)||(25163944-25164009)
chr8 (36-101)||(33082740-33082805)
chr8 (164-200)||(17687984-17688020)
[»] chr5 (38 HSPs)
chr5 (36-288)||(23589590-23589842)
chr5 (43-286)||(26119839-26120082)
chr5 (32-283)||(16607387-16607638)
chr5 (37-288)||(20969089-20969326)
chr5 (32-286)||(34638330-34638575)
chr5 (37-288)||(39798894-39799135)
chr5 (35-159)||(2156411-2156535)
chr5 (36-288)||(20567688-20567932)
chr5 (37-288)||(13692307-13692547)
chr5 (32-286)||(17262747-17262992)
chr5 (180-288)||(31589025-31589133)
chr5 (180-288)||(27057336-27057444)
chr5 (180-288)||(22586013-22586122)
chr5 (37-113)||(20237560-20237636)
chr5 (37-113)||(26055715-26055791)
chr5 (36-107)||(17814846-17814917)
chr5 (32-105)||(22586187-22586260)
chr5 (180-288)||(27276156-27276267)
chr5 (32-83)||(24021592-24021643)
chr5 (224-286)||(20237397-20237459)
chr5 (36-101)||(12352989-12353054)
chr5 (36-100)||(21099899-21099963)
chr5 (36-100)||(25741001-25741065)
chr5 (36-107)||(6512616-6512687)
chr5 (36-102)||(32160644-32160710)
chr5 (36-102)||(33022546-33022612)
chr5 (41-99)||(34637442-34637500)
chr5 (36-101)||(89616-89681)
chr5 (36-101)||(6499117-6499182)
chr5 (36-101)||(7745887-7745952)
chr5 (36-101)||(13736326-13736391)
chr5 (36-101)||(21203840-21203905)
chr5 (36-101)||(21910434-21910499)
chr5 (36-100)||(21199198-21199262)
chr5 (36-100)||(23880945-23881009)
chr5 (36-72)||(25097048-25097084)
chr5 (36-72)||(25155018-25155054)
chr5 (220-288)||(34637577-34637645)
[»] chr2 (37 HSPs)
chr2 (36-288)||(21846023-21846275)
chr2 (32-288)||(20568007-20568264)
chr2 (80-288)||(24440705-24440912)
chr2 (36-288)||(24157715-24157960)
chr2 (36-288)||(10896403-10896661)
chr2 (38-288)||(22383357-22383599)
chr2 (180-288)||(21911046-21911154)
chr2 (180-288)||(25918663-25918772)
chr2 (37-135)||(15670744-15670843)
chr2 (32-280)||(18430918-18431167)
chr2 (37-105)||(25918530-25918598)
chr2 (36-107)||(19320560-19320631)
chr2 (32-152)||(18702611-18702732)
chr2 (32-101)||(22272005-22272074)
chr2 (180-288)||(24844153-24844262)
chr2 (222-288)||(33705983-33706049)
chr2 (36-101)||(13964137-13964202)
chr2 (180-288)||(15668526-15668635)
chr2 (36-101)||(21537409-21537474)
chr2 (36-101)||(22188261-22188326)
chr2 (36-101)||(23184463-23184528)
chr2 (36-101)||(23595726-23595791)
chr2 (36-101)||(24850825-24850890)
chr2 (32-101)||(26619259-26619328)
chr2 (32-99)||(19114956-19115023)
chr2 (32-72)||(44881040-44881080)
chr2 (36-107)||(22258077-22258148)
chr2 (36-99)||(23234883-23234946)
chr2 (36-107)||(25037412-25037483)
chr2 (36-107)||(25829010-25829081)
chr2 (36-101)||(6574284-6574349)
chr2 (36-101)||(9015527-9015592)
chr2 (36-101)||(22317469-22317534)
chr2 (36-101)||(24376977-24377042)
chr2 (36-101)||(25189274-25189339)
chr2 (36-101)||(28711857-28711922)
chr2 (232-272)||(23595555-23595595)
[»] scaffold0364 (1 HSPs)
scaffold0364 (36-269)||(10403-10636)
[»] chr4 (37 HSPs)
chr4 (36-288)||(13027653-13027905)
chr4 (36-288)||(20570985-20571236)
chr4 (36-244)||(19889023-19889231)
chr4 (40-286)||(14357119-14357364)
chr4 (36-288)||(16324502-16324753)
chr4 (32-281)||(10661155-10661405)
chr4 (32-281)||(10875300-10875550)
chr4 (36-288)||(18773931-18774174)
chr4 (37-286)||(2651686-2651923)
chr4 (38-288)||(14902445-14902684)
chr4 (32-147)||(11901061-11901177)
chr4 (85-288)||(10249738-10249941)
chr4 (32-137)||(18473897-18474003)
chr4 (37-288)||(20577161-20577411)
chr4 (36-101)||(13890704-13890769)
chr4 (32-101)||(41114939-41115008)
chr4 (32-99)||(8685614-8685681)
chr4 (36-107)||(19666248-19666319)
chr4 (180-286)||(18394550-18394659)
chr4 (32-101)||(17540268-17540337)
chr4 (36-101)||(37435705-37435770)
chr4 (36-101)||(56034450-56034515)
chr4 (36-107)||(14904520-14904591)
chr4 (36-107)||(12811339-12811410)
chr4 (36-107)||(23123395-23123466)
chr4 (36-107)||(29680708-29680779)
chr4 (36-101)||(6641560-6641625)
chr4 (36-101)||(12600634-12600699)
chr4 (36-101)||(14605074-14605139)
chr4 (36-101)||(17247119-17247184)
chr4 (36-113)||(17526547-17526624)
chr4 (32-97)||(17788218-17788283)
chr4 (36-101)||(37985782-37985847)
chr4 (36-101)||(45833270-45833335)
chr4 (36-101)||(55380166-55380231)
chr4 (164-196)||(2940450-2940482)
chr4 (224-288)||(17812280-17812344)
[»] scaffold0011 (1 HSPs)
scaffold0011 (36-288)||(59438-59690)
[»] chr3 (61 HSPs)
chr3 (36-288)||(16882168-16882420)
chr3 (32-288)||(22766557-22766805)
chr3 (40-288)||(16794309-16794557)
chr3 (32-288)||(14007447-14007703)
chr3 (36-256)||(14077409-14077629)
chr3 (36-215)||(27374644-27374823)
chr3 (40-288)||(8729022-8729263)
chr3 (40-288)||(9080909-9081150)
chr3 (36-288)||(10851688-10851940)
chr3 (32-279)||(6253296-6253545)
chr3 (39-288)||(20418115-20418363)
chr3 (32-288)||(17697486-17697741)
chr3 (36-215)||(16879896-16880074)
chr3 (32-288)||(19197904-19198159)
chr3 (32-283)||(12396943-12397198)
chr3 (37-285)||(314975-315213)
chr3 (32-288)||(14072575-14072822)
chr3 (37-124)||(13699248-13699336)
chr3 (37-288)||(21317283-21317522)
chr3 (180-288)||(16305188-16305297)
chr3 (180-278)||(4243208-4243305)
chr3 (183-285)||(13653942-13654044)
chr3 (32-156)||(12968184-12968309)
chr3 (36-113)||(17762294-17762371)
chr3 (36-113)||(19063614-19063691)
chr3 (32-101)||(20724965-20725034)
chr3 (37-113)||(16305354-16305430)
chr3 (36-107)||(11513719-11513790)
chr3 (37-131)||(13653808-13653902)
chr3 (37-89)||(11078531-11078583)
chr3 (180-287)||(11078670-11078778)
chr3 (36-107)||(49642969-49643040)
chr3 (210-288)||(3087590-3087668)
chr3 (36-106)||(13780792-13780862)
chr3 (36-101)||(22804236-22804301)
chr3 (32-101)||(26417889-26417958)
chr3 (36-113)||(27851424-27851501)
chr3 (36-101)||(29951651-29951716)
chr3 (36-101)||(30000805-30000870)
chr3 (36-107)||(17668287-17668358)
chr3 (36-99)||(31303267-31303330)
chr3 (36-74)||(15647631-15647669)
chr3 (36-102)||(45861784-45861850)
chr3 (36-102)||(47405633-47405699)
chr3 (36-101)||(12389085-12389150)
chr3 (36-101)||(16812094-16812159)
chr3 (36-101)||(18121827-18121892)
chr3 (36-101)||(18142957-18143022)
chr3 (36-113)||(18459345-18459422)
chr3 (36-101)||(19249624-19249689)
chr3 (36-101)||(20627644-20627709)
chr3 (36-101)||(20646035-20646100)
chr3 (36-101)||(25398468-25398533)
chr3 (36-101)||(28581987-28582052)
chr3 (36-101)||(49553702-49553767)
chr3 (36-104)||(1464163-1464231)
chr3 (36-72)||(4243383-4243419)
chr3 (40-112)||(7832841-7832913)
chr3 (36-116)||(12410004-12410084)
chr3 (232-280)||(12968385-12968433)
chr3 (32-100)||(23538379-23538447)
[»] scaffold1026 (1 HSPs)
scaffold1026 (36-288)||(2847-3099)
[»] scaffold0311 (1 HSPs)
scaffold0311 (36-288)||(19949-20200)
[»] scaffold0772 (1 HSPs)
scaffold0772 (36-286)||(860-1110)
[»] scaffold0522 (2 HSPs)
scaffold0522 (42-288)||(4245-4490)
scaffold0522 (42-288)||(11528-11773)
[»] scaffold0078 (1 HSPs)
scaffold0078 (32-281)||(31766-32017)
[»] scaffold0498 (3 HSPs)
scaffold0498 (32-210)||(366-544)
scaffold0498 (222-288)||(3284-3350)
scaffold0498 (226-266)||(310-350)
[»] scaffold0035 (1 HSPs)
scaffold0035 (32-283)||(29671-29924)
[»] scaffold0622 (3 HSPs)
scaffold0622 (32-288)||(2536-2792)
scaffold0622 (180-288)||(3381-3489)
scaffold0622 (37-105)||(3562-3630)
[»] scaffold0009 (2 HSPs)
scaffold0009 (42-156)||(268669-268784)
scaffold0009 (36-97)||(84277-84338)
[»] scaffold0003 (3 HSPs)
scaffold0003 (35-288)||(582-836)
scaffold0003 (220-288)||(416028-416096)
scaffold0003 (53-105)||(416201-416253)
[»] scaffold0490 (1 HSPs)
scaffold0490 (42-170)||(7219-7347)
[»] scaffold0002 (1 HSPs)
scaffold0002 (32-288)||(112085-112336)
[»] scaffold0004 (3 HSPs)
scaffold0004 (36-146)||(88286-88396)
scaffold0004 (32-96)||(244451-244515)
scaffold0004 (36-101)||(377723-377788)
[»] scaffold0020 (1 HSPs)
scaffold0020 (32-210)||(144784-144962)
[»] scaffold0758 (2 HSPs)
scaffold0758 (161-288)||(4275-4402)
scaffold0758 (37-105)||(4152-4220)
[»] scaffold0074 (1 HSPs)
scaffold0074 (180-288)||(31648-31756)
[»] scaffold0040 (2 HSPs)
scaffold0040 (37-288)||(4000-4241)
scaffold0040 (33-156)||(1628-1752)
[»] scaffold0388 (2 HSPs)
scaffold0388 (180-284)||(5400-5506)
scaffold0388 (35-74)||(5267-5306)
[»] scaffold0351 (1 HSPs)
scaffold0351 (144-288)||(9234-9373)
[»] scaffold0273 (1 HSPs)
scaffold0273 (32-156)||(5506-5631)
[»] scaffold0683 (2 HSPs)
scaffold0683 (37-105)||(269-337)
scaffold0683 (200-289)||(420-509)
[»] scaffold0043 (1 HSPs)
scaffold0043 (37-105)||(1990-2058)
[»] scaffold0201 (1 HSPs)
scaffold0201 (36-87)||(19075-19126)
[»] scaffold0193 (1 HSPs)
scaffold0193 (32-119)||(16286-16373)
[»] scaffold0598 (1 HSPs)
scaffold0598 (32-125)||(1934-2027)
[»] scaffold0081 (1 HSPs)
scaffold0081 (32-101)||(40517-40586)
[»] scaffold0064 (1 HSPs)
scaffold0064 (32-111)||(44072-44151)
[»] scaffold0026 (1 HSPs)
scaffold0026 (36-107)||(7808-7879)
[»] scaffold1107 (1 HSPs)
scaffold1107 (221-287)||(2339-2405)
[»] scaffold0037 (1 HSPs)
scaffold0037 (180-283)||(78421-78527)
[»] scaffold1747 (1 HSPs)
scaffold1747 (32-101)||(1196-1265)
[»] scaffold1745 (1 HSPs)
scaffold1745 (32-101)||(146-215)
[»] scaffold0567 (1 HSPs)
scaffold0567 (36-101)||(9788-9853)
[»] scaffold0251 (1 HSPs)
scaffold0251 (36-101)||(7587-7652)
[»] scaffold0210 (1 HSPs)
scaffold0210 (36-101)||(1542-1607)
[»] scaffold0067 (1 HSPs)
scaffold0067 (221-286)||(16400-16465)
[»] scaffold0056 (1 HSPs)
scaffold0056 (32-101)||(36346-36415)
[»] scaffold0023 (1 HSPs)
scaffold0023 (36-101)||(103453-103518)
[»] scaffold0007 (1 HSPs)
scaffold0007 (36-101)||(142979-143044)
[»] scaffold0092 (1 HSPs)
scaffold0092 (221-273)||(8150-8202)
[»] scaffold0337 (1 HSPs)
scaffold0337 (36-107)||(14530-14601)
[»] scaffold0290 (1 HSPs)
scaffold0290 (36-107)||(18779-18850)
[»] scaffold0083 (1 HSPs)
scaffold0083 (36-107)||(26133-26204)
[»] scaffold0065 (1 HSPs)
scaffold0065 (36-107)||(1572-1643)
[»] scaffold1359 (1 HSPs)
scaffold1359 (36-94)||(826-884)
[»] scaffold0297 (1 HSPs)
scaffold0297 (36-74)||(16837-16875)
[»] scaffold0217 (1 HSPs)
scaffold0217 (36-101)||(18913-18978)
[»] scaffold0161 (2 HSPs)
scaffold0161 (36-101)||(10272-10337)
scaffold0161 (36-101)||(14936-15001)
[»] scaffold0047 (1 HSPs)
scaffold0047 (36-101)||(9785-9850)
[»] scaffold0022 (2 HSPs)
scaffold0022 (36-101)||(37284-37349)
scaffold0022 (36-101)||(135344-135409)
[»] scaffold0005 (1 HSPs)
scaffold0005 (36-101)||(212239-212304)
[»] scaffold1331 (1 HSPs)
scaffold1331 (37-101)||(1863-1927)
[»] scaffold0426 (1 HSPs)
scaffold0426 (36-100)||(13453-13517)
[»] scaffold0084 (1 HSPs)
scaffold0084 (40-107)||(32371-32438)


Alignment Details
Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 32 - 302
Target Start/End: Complemental strand, 16462922 - 16462652
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  16462922 atcaaatcaccaatgatatgttgcttgatttggttattgtcctagaagggaacaatttcaaatccattccttgtatagagaaataccagcgtattcacaa 16462823  T
Q  132 ctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaac 231  Q
    ||||||||||||||||||||||||||||||||||||||| || | || |||||||||||||||||||||||||||||||||||| ||| ||||||||| |    
T  16462822 ctgttgtcttgtactattgcagacatgaggagtggagtattggatgtagtggttgtacaattgtactatgtccttttcctgcgctctccagtggataagc 16462723  T
Q  232 atccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttctctgatgatgtccat 302  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||||||||||| | |||||||||||    
T  16462722 atccaatgccttcaaattcctctgatttagccgtttctccaggcttctattccttctgtaatgatgtccat 16462652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 36 - 249
Target Start/End: Complemental strand, 24719010 - 24718797
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||||||||||||||||||||||| ||||    | | | ||||||||||||||||||||||||| ||||  ||||||||||||||| ||||    
T  24719010 aatcaccaatgatctgttgcttgatttggttatagtcccaagaagcaccaatttcaaatccattccttgtataaagaacaaccagcgtagtcacaactgt 24718911  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| | ||  ||||||||| |||||    
T  24718910 tgtcttgtactattgcagacatgaggagtggagtagtggaggtagtggctgtacaattgtactatgtccttttcctgcactcttcagtggataagcatcc 24718811  T
Q  236 aatgccttcaaatt 249  Q
    ||||||||| ||||    
T  24718810 aatgccttctaatt 24718797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 36 - 256
Target Start/End: Complemental strand, 24728814 - 24728603
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    |||||| |||||||| ||||||||||||||||||||||    | ||| ||||||||||||||||||||||||| ||||  ||||||||||||||| ||||    
T  24728814 aatcactaatgatctattgcttgatttggttattgtcccaagaaggaccaatttcaaatccattccttgtataaagaataaccagcgtagtcacaactgt 24728715  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||| | ||  ||||||||| |||||    
T  24728714 tgtcttgtactattgcagacatgaggagtggagta---------gtggttgtacaattgtactatgtccttttcctgcactcttcagtggataagcatcc 24728624  T
Q  236 aatgccttcaaattcctctga 256  Q
    ||||||||| |||||||||||    
T  24728623 aatgccttctaattcctctga 24728603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 36 - 288
Target Start/End: Complemental strand, 18172301 - 18172049
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||||||||| |||||||||||||||||||   | ||||||||||||||| | |||| | |||||||||  ||||||||||||||| ||||    
T  18172301 aatcaccaatgatctgttggttgatttggttattgtcctatgaaggaacaatttcaaattcgttccatttatagagaataaccagcgtagtcacatctgt 18172202  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    |||||||||| |||| |||||  |||| |||||||||| |||| ||||||||||||||||||||||||||||||||||   ||  | ||||||| |||      
T  18172201 tgtcttgtacaattgtagacacaaggattggagtagtggaggtagtggttgtacaattgtactatgtccttttcctgcagtcttcaatggataagcattt 18172102  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||| |||| |||||||||||  |||||||||||  ||||||| || ||||||    
T  18172101 aatgtcttctaattcctctgaaatagtcgttgctctaggcttccataccttct 18172049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 36 - 266
Target Start/End: Complemental strand, 23006316 - 23006094
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaat-accagcgtagtcacagctg 134  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| | |||| | |||| ||||||||||||||| |||    
T  23006316 aatcaccaatgatctgttgcttgatttggttattgtcctatgagggaacaatttcaaatccattccatttataaaaaaataaccagcgtagtcacatctg 23006217  T
Q  135 ttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatc 234  Q
    ||||||||||||||||||||||  ||||||||||||         |||||||||||||||||||||||| ||||| ||| | ||  | ||||||| ||||    
T  23006216 ttgtcttgtactattgcagacacaaggagtggagta---------gtggttgtacaattgtactatgtctttttcttgcactcttcaatggataagcatc 23006126  T
Q  235 caatgccttcaaattcctctgatttagtcgtt 266  Q
     ||||||||| |||||||||||  ||||||||    
T  23006125 taatgccttctaattcctctgaaatagtcgtt 23006094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 36 - 266
Target Start/End: Original strand, 23782050 - 23782272
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaat-accagcgtagtcacagctg 134  Q
    |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| | |||| | |||| ||||||||||||||| |||    
T  23782050 aatcaccaatgatctgttgcttgatttggttattgtcctatgagggaacaatttcaaatccattccatttataaaaaaataaccagcgtagtcacatctg 23782149  T
Q  135 ttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatc 234  Q
    ||||||||||||||||||||||  ||||||||||||         |||||||||||||||||||||||| ||||| ||| | ||  | ||||||| ||||    
T  23782150 ttgtcttgtactattgcagacacaaggagtggagta---------gtggttgtacaattgtactatgtctttttcttgcactcttcaatggataagcatc 23782240  T
Q  235 caatgccttcaaattcctctgatttagtcgtt 266  Q
     ||||||||| |||||||||||  ||||||||    
T  23782241 taatgccttctaattcctctgaaatagtcgtt 23782272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 288
Target Start/End: Original strand, 25930352 - 25930608
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||||| |||||||||||||||||| ||||   | |||||||||| |||| |||||| ||||||||| ||||||| |||||||||||    
T  25930352 atcaaatcaccaatgatctattgcttgatttggttattatcctatgaaggaacaattttaaattcattccatgtatagaggaataccaacgtagtcacag 25930451  T
Q  132 ctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataa 229  Q
    |||||| |||||||||||||||||||  |  |   |||||||| || | |||||||||||||||||||| | |||||||||  ||| ||  |  | ||||    
T  25930452 ctgttgttcttgtactattgcagacacaa--aagagagtagtggagatagtggttgtacaattgtactattatccttttccaacgctcttcaaggaataa 25930549  T
Q  230 acatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
     ||||||||| |||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  25930550 gcatccaatgacttcaaattcctctgaattagccgttgctccaggcttctattccttct 25930608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 32 - 288
Target Start/End: Original strand, 7811890 - 7812145
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||||||||||||||| ||||||||||||||||||||||||   ||||||||||||||||| |||||| ||||||||||| ||||| ||||||||||     
T  7811890 atcaaatcaccaatgatcggttgcttgatttggttattgtcctaagagggaacaatttcaaattcattccatgtatagagaattaccaacgtagtcacaa 7811989  T
Q  132 ctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataaa 230  Q
    || ||||||||||||||||||||||  |  |   |||||||| || | |||||||||||||||||| | ||||||||||     | ||   ||| ||||     
T  7811990 ctattgtcttgtactattgcagacacaa--aacagagtagtggagatagtggttgtacaattgtaccattgtccttttctaatcctcttcggtgaataag 7812087  T
Q  231 catccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||||||| |||||||||||| ||||||||||||  | |||||||||||||||    
T  7812088 catccaatgcctttaaattcctctgaattagtcgttgctcaaagcttctattccttct 7812145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 36 - 256
Target Start/End: Original strand, 19875714 - 19875935
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||||| |||||||||||||||||||||||   |  ||||||||||||||| | ||| |  |||||||   |||| |||| ||||| ||||    
T  19875714 aatcaccaatgatcttttgcttgatttggttattgtcctatgaatgaacaatttcaaatctactccctaaatagagagtcaccaacgtattcacacctgt 19875813  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtcc-ttttcctgcgccctctagtggataaacatc 234  Q
    |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| |||||  |||| || |||||||||| ||||    
T  19875814 tgtcttgtactactgcagacatgaggagtggagtagtggaggtagtggttgtacaattgtactatatcctttttcgagcgctctttagtggataagcatc 19875913  T
Q  235 caatgccttcaaattcctctga 256  Q
    || ||||||  |||||||||||    
T  19875914 cattgccttgtaattcctctga 19875935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 36 - 289
Target Start/End: Complemental strand, 17445926 - 17445673
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| |||||||||||| || |||  ||||||||  |||    
T  17445926 aatcaccaatgatctgttgcttgatttggttattgtcctagtagggaacaatttcaaattcattctttgtatagagaattatcagtctagtcacaattgt 17445827  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | |||||||||  || ||||| || |||| ||||||||||||| ||| ||||||||||||| |||||  ||||  ||| | ||  || |||| | ||| |    
T  17445826 tatcttgtacttatgtagacaagaagagttgagtagtgaaggtagtgattgtacaattgtattatgtattttttttgcactcttcagcggatcagcattc 17445727  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttctc 289  Q
    |||| |||| |||||||||||  ||||||||||| ||||||   ||||||||||    
T  17445726 aatgtcttctaattcctctgaaatagtcgttgctccaggctctcattccttctc 17445673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 41 - 252
Target Start/End: Original strand, 17867459 - 17867661
Alignment:
Q  41 ccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttgtct 140  Q
    ||||||||||||| ||||||| |||||||||||| | ||||||||||||||||| ||||||||| ||||||||  ||||| |||| ||||| |||| |||    
T  17867459 ccaatgatctgtttcttgattgggttattgtcctaggagggaacaatttcaaattcattccttgaatagagaataaccagagtagacacagttgttatct 17867558  T
Q  141 tgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgc 240  Q
    ||||||| ||| ||||||||||||||||||         || |||| |||||||||||||||||||| ||||||| ||  ||||||||| ||||||||||    
T  17867559 tgtactactgccgacatgaggagtggagta---------gtagttgcacaattgtactatgtcctttccctgcgctcttcagtggataagcatccaatgc 17867649  T
Q  241 cttcaaattcct 252  Q
    |||| |||||||    
T  17867650 cttctaattcct 17867661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 41 - 252
Target Start/End: Original strand, 17877242 - 17877444
Alignment:
Q  41 ccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttgtct 140  Q
    ||||||||||||| ||||||| |||||||||||| | ||||||||||||||||| ||||||||| ||||||||  ||||| |||| ||||| |||| |||    
T  17877242 ccaatgatctgtttcttgattgggttattgtcctaggagggaacaatttcaaattcattccttgaatagagaataaccagagtagacacagttgttatct 17877341  T
Q  141 tgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgc 240  Q
    ||||||| ||| ||||||||||||||||||         || |||| |||||||||||||||||||| ||||||| ||  ||||||||| ||||||||||    
T  17877342 tgtactactgccgacatgaggagtggagta---------gtagttgcacaattgtactatgtcctttccctgcgctcttcagtggataagcatccaatgc 17877432  T
Q  241 cttcaaattcct 252  Q
    |||| |||||||    
T  17877433 cttctaattcct 17877444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 36 - 286
Target Start/End: Complemental strand, 30451803 - 30451553
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    |||||||||||||||||| ||||||||| ||||||||||   | |||||||||||||||||||||| |||||||||||| ||||||||||   ||  |||    
T  30451803 aatcaccaatgatctgtttcttgatttgattattgtcctatgaaggaacaatttcaaatccattccatgtatagagaaaaaccagcgtaggtgcaattgt 30451704  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataaacatc 234  Q
      |||||||| || |||||||||  ||||||||||||| | ||  |||||||| |||||||||| ||| ||||| |||||| ||  ||||||||| ||||    
T  30451703 attcttgtacaatagcagacatggtgagtggagtagtgga-gtactggttgtataattgtactattgttctttttctgcgctcttcagtggataagcatc 30451605  T
Q  235 caatgccttcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    ||||||||||||||| || |||  ||  |||| ||||||||||| |||||||    
T  30451604 caatgccttcaaatttctatgaaataaccgttacttcaggcttccattcctt 30451553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 37 - 286
Target Start/End: Complemental strand, 10704807 - 10704567
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgtt 136  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| | ||||||  |||||||||  ||  | ||||    
T  10704807 atcaccaatgatctgttgcttgatttggttattgtccttggagggaacaatttcaaattcattccttgaaaagagaataaccagcgtatacatggttgtt 10704708  T
Q  137 gtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtcc-ttttcctgcgccctctagtggataaacatcc 235  Q
    | ||||||||||||||||||||| ||||||||||         |||||||||||||||||||||| || ||||||| ||| ||   |||||||| ||| |    
T  10704707 g-cttgtactattgcagacatgaagagtggagta---------gtggttgtacaattgtactatgccctttttcctacgctcttcggtggataagcattc 10704618  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    |||| |||| ||||||| | |  |||||||||||  |||||||||||||||    
T  10704617 aatgtcttctaattcctttaaaatagtcgttgctctaggcttctattcctt 10704567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 288
Target Start/End: Original strand, 32335714 - 32335954
Alignment:
Q  40 accaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttgtc 139  Q
    ||||||||| |||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||  |||||| |||   ||| |||  ||    
T  32335714 accaatgatatgttgcttgatttggttattgtcctatgagggaacaatttcaaatccattccatgtatagagaataaccagcataggtgcagttgtattc 32335813  T
Q  140 ttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactat-gtccttttcctgcgccctctagtggataaacatccaat 238  Q
    ||||| | ||| |||||||  ||||||||||         ||||||||||||||||||||| ||||| |||| | || ||  ||||||||| |||| |||    
T  32335814 ttgtaatgttgtagacatggtgagtggagta---------gtggttgtacaattgtactatcgtcctattccagagctcttcagtggataagcatctaat 32335904  T
Q  239 gccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
     ||||||||||| |||||  ||||||||||| |||||||| |||||||||    
T  32335905 cccttcaaattcttctgaaatagtcgttgctccaggcttccattccttct 32335954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 283
Target Start/End: Original strand, 19625686 - 19625938
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttc-aaatccattccttgtatagagaaataccagcgtagtcaca 130  Q
    |||||||||||||||||||||||| ||||||||||||||||||   | |||| |||||| ||||||||||||||||| ||| ||||| |||||||||||     
T  19625686 atcaaatcaccaatgatctgttgcctgatttggttattgtcctatgaaggaagaatttcaaaatccattccttgtatggaggaatacaagcgtagtcacg 19625785  T
Q  131 gctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggata 228  Q
     |||||| |||||||||||||||||||  |  |   |||||||| |||| ||||||||||| |||||||| |||||||||||  ||  ||| |    |||    
T  19625786 actgttgttcttgtactattgcagacacaa--aacagagtagtggaggtagtggttgtacacttgtactattgtccttttccaacgttctccatgaaata 19625883  T
Q  229 aacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattc 283  Q
    | ||| |||||||||||||||||||| || ||| ||||||| || ||||| ||||    
T  19625884 agcattcaatgccttcaaattcctctaatatagccgttgctccaagcttccattc 19625938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 32 - 288
Target Start/End: Original strand, 21034872 - 21035129
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgt-cctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcaca 130  Q
    ||||||||||||||||||||||||||||||| |||||| | |||   | |||| |||||||||||||||||  |||||||  || || ||||||||  ||    
T  21034872 atcaaatcaccaatgatctgttgcttgattttgttatttttcctatgaaggaaaaatttcaaatccattccaagtatagaacaaaactagcgtagttgca 21034971  T
Q  131 gctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtcc-ttttcctgcgccctctagtggataa 229  Q
     || |  |||||||| || |||||||||| ||||| ||||||| ||   ||||||||||||||||||| |  || ||||||||||  || ||||| ||||    
T  21034972 actatattcttgtacaatagcagacatgatgagtgaagtagtggagca-gtggttgtacaattgtactgttacccttttcctgcgttctttagtgaataa 21035070  T
Q  230 acatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
     |||||||||| ||||||||||| ||| |||||||||||| || ||||| |||||||||    
T  21035071 gcatccaatgctttcaaattcctatgaattagtcgttgctccaagcttccattccttct 21035129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 17927667 - 17927793
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||||||| |||||| |||||||||||||||||||||||||  || ||||||||||||||||||||||  | |||||| |||||||| |||| |||||    
T  17927667 atcaaatcactaatgatttgttgcttgatttggttattgtcctataaaggaacaatttcaaatccattccaagaatagaggaataccagtgtagccacag 17927766  T
Q  132 ctgttg-tcttgtactattgcagacat 157  Q
     ||||| ||||||||||||||||||||    
T  17927767 ttgttgttcttgtactattgcagacat 17927793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 32 - 286
Target Start/End: Original strand, 12347967 - 12348227
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttga-----tttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagt 126  Q
    ||||||||||||||||| ||||||||||     |||||||||||||||   || |||||||||||||| ||||||||||| ||||| |||||||||||||    
T  12347967 atcaaatcaccaatgatttgttgcttgatttgatttggttattgtcctaagagagaacaatttcaaattcattccttgtaaagagagataccagcgtagt 12348066  T
Q  127 cacagctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtc-cttttcctgcgccctctagt 223  Q
    ||||||| ||| ||||||||||||||  |||  |  |   |||||||| || | ||||||||||||||||| || ||||  ||||||  ||  ||  |      
T  12348067 cacagctattgttcttgtactattgctaacacaa--aacagagtagtggagatagtggttgtacaattgtattattgtcatttttccaacgttcttcaag 12348164  T
Q  224 ggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    |||||| ||||||||| |||||||||||| ||| |||| | ||||| ||||||||||||||||    
T  12348165 ggataagcatccaatgacttcaaattcctatgaattagccattgctccaggcttctattcctt 12348227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 130
Target Start/End: Original strand, 23296601 - 23296699
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcaca 130  Q
    |||||||||||||||||||||||||||||||||||||||||||   | | ||||||||||||||||||||  |||||||| |||||||| |||||||||    
T  23296601 atcaaatcaccaatgatctgttgcttgatttggttattgtcctaagaagaaacaatttcaaatccattccaagtatagaggaataccagtgtagtcaca 23296699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 200
Target Start/End: Original strand, 25592496 - 25592663
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||| || |||||||||||||||||||||||||||  |  |   ||||||||||| |||||||||||||||| || ||||||||||| |||||||||     
T  25592496 atcaaaccatcaatgatctgttgcttgatttggttataattttaagagggaacaattccaaatccattccttgtgtaaagaaataccagtgtagtcacaa 25592595  T
Q  132 ctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactat 200  Q
    |||||| |||||||||||||||||||  |  |   |||||||| || | |||||||||||||||||||||    
T  25592596 ctgttgttcttgtactattgcagacacaa--aacagagtagtggagatagtggttgtacaattgtactat 25592663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 37 - 256
Target Start/End: Original strand, 23231069 - 23231283
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgtt 136  Q
    |||||||||||||| |||| |||||||||||||| |||   |||||||| |||||||| |||||| || |||||||   || ||||||| ||||  ||||    
T  23231069 atcaccaatgatcttttgcatgatttggttattgacctatgagggaacactttcaaattcattccctgaatagagactaactagcgtaggcacatttgtt 23231168  T
Q  137 gtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcca 236  Q
      ||||||||||||||||||||| || |||||||||| | ||  || |||    ||||||||||||||||||||||||| ||   |||||||| ||||||    
T  23231169 -acttgtactattgcagacatgaagaatggagtagtgga-gtattgattg---gattgtactatgtccttttcctgcgctcttccgtggataagcatcca 23231263  T
Q  237 atgccttcaaattcctctga 256  Q
    |||||||| |||| ||||||    
T  23231264 atgccttctaatttctctga 23231283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 180 - 288
Target Start/End: Original strand, 24398683 - 24398791
Alignment:
Q  180 gtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttct 279  Q
    |||||||||||| |||||||| |||||||| ||||| |   ||||||||| |||||||||||||| ||||||| | |  ||||||||||| |||||||||    
T  24398683 gtggttgtacaactgtactatatccttttcatgcgctcatcagtggataagcatccaatgccttctaattcctttaaaatagtcgttgctccaggcttct 24398782  T
Q  280 attccttct 288  Q
    || ||||||    
T  24398783 ataccttct 24398791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 288
Target Start/End: Original strand, 13145156 - 13145265
Alignment:
Q  180 gtggttgtacaattgtactat--gtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggctt 277  Q
    |||||||||||||||||||||  ||||||||| | | | || |||||||||| ||| |||||||||| ||||| |||||  |||||||||| ||||||||    
T  13145156 gtggttgtacaattgtactatatgtccttttctt-ctctctttagtggataagcattcaatgccttctaattcatctgaaatagtcgttgcatcaggctt 13145254  T
Q  278 ctattccttct 288  Q
    |||||||||||    
T  13145255 ctattccttct 13145265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 32 - 286
Target Start/End: Original strand, 26185590 - 26185842
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaat-accagcgtagtcaca 130  Q
    |||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||| ||||| ||| ||||| | ||||| | |||||||||| ||||    
T  26185590 atcaaatcaccaatgatctgttgcttgatttggttaatgtcctaggaggaaataatttgaaatcaattacttgtttggagaattaaccagcgtagacaca 26185689  T
Q  131 gctgttgtcttgtactat-tgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggata 228  Q
     || | |    ||| ||| |||||||||| | |||||| ||||| |  | |||||||||||| ||||||| ||||||||| |||| | || |||||||||    
T  26185690 actatag--cagtattatgtgcagacatg-gtagtggaatagtgga-atagtggttgtacaa-tgtactattgtcctttttctgcactctttagtggata 26185784  T
Q  229 aacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    | |||| ||||||||| ||||| |||||  ||| ||||| | |||  |||||||||||    
T  26185785 agcatctaatgccttctaattcatctgaaatagccgttgttccagatttctattcctt 26185842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 13144886 - 13144979
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcaca 130  Q
    ||||||| ||||||||||||| |||| ||||||||||| | || ||||||| |||||| ||||||||| | ||||||  |||||||||| ||||    
T  13144886 atcaccattgatctgttgcttaatttagttattgtcctaggagagaacaatatcaaattcattccttgaaaagagaataaccagcgtagacaca 13144979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 18026849 - 18026782
Alignment:
Q  221 agtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||| |||||||||||||| |||||||||||  |||| |||||| |||||||||| |||||||    
T  18026849 agtggataagcatccaatgccttctaattcctctgaaatagttgttgctccaggcttctactccttct 18026782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 19623861 - 19623925
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattc 100  Q
    ||||||||||||||| |||| |||| |||||||||||||  || ||| |||||||||||||||||    
T  19623861 aatcaccaatgatcttttgcctgatatggttattgtcctataaaggatcaatttcaaatccattc 19623925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 15551866 - 15551933
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcctt 103  Q
    |||||||||||||| | ||||||||||||||||||||||   |||||| ||||| |||| ||||||||    
T  15551866 aatcaccaatgatccgatgcttgatttggttattgtcctaagagggaataatttgaaattcattcctt 15551933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 21235006 - 21235071
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcct-cgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||| ||| ||||||||||| ||||||    
T  21235006 aatcaccaatgatcttttgcttgatatggttattgtcctacgaa-ggatcaatttcaaatgcattcc 21235071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 25593950 - 25594020
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgta 106  Q
    |||||||||||| || |||  |||| |||||||||||||| || ||| |||||||||||||||||| ||||    
T  25593950 aatcaccaatgaccttttggctgatatggttattgtcctctaaaggatcaatttcaaatccattccatgta 25594020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 19470553 - 19470618
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| ||||||||||||||||||   | |||  |||||||||||||||||    
T  19470553 aatcaccaatgatcttttgcctgatttggttattgtcctatgaaggattaatttcaaatccattcc 19470618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 18026993 - 18026917
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaa 113  Q
    |||||||||||||  |||||||||||||||| |||| | | | |||| ||||| ||| | |||||||||||||||||    
T  18026993 atcaccaatgatccattgcttgatttggttaatgtcttaggaaggaataatttgaaaactattccttgtatagagaa 18026917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 26943459 - 26943523
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    |||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  26943459 atcaccaatgatcttttgcatgatatggttattgtcctatgaaggatcaatttcaaatccattcc 26943523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 9717725 - 9717790
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||| ||||   | ||| ||||||||||||||||||    
T  9717725 aatcaccaatgatcttttgcctgatatggttattctcctatgaaggatcaatttcaaatccattcc 9717790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 18435438 - 18435503
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| || | |||| |||||||||||||   | ||| ||||||||||||||||||    
T  18435438 aatcaccaatgatctttttcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 18435503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 20112967 - 20112902
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| |||||||||||| |||||    
T  20112967 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatctattcc 20112902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 20488185 - 20488120
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| ||||||    
T  20488185 aatcaccaatgatcttttgcctgatatggttattgtcctaagaaggatcaatttcaaatgcattcc 20488120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 24116710 - 24116775
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| || ||||||||||   | ||| ||||||||||||||||||    
T  24116710 aatcaccaatgatcttttgcctgatatgattattgtcctatgaaggatcaatttcaaatccattcc 24116775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 32544147 - 32544212
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| || | |||| |||||||||||||   | ||| ||||||||||||||||||    
T  32544147 aatcaccaatgatctttttcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 32544212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 20730971 - 20730907
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattc 100  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| |||||    
T  20730971 aatcaccaatgatcttttgcctgatatggttattgtcctaagaaggatcaatttcaaatgcattc 20730907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 20890914 - 20890950
Alignment:
Q  35 aaatcaccaatgatctgttgcttgatttggttattgt 71  Q
    |||||| |||||||||||||||||||||| |||||||    
T  20890914 aaatcatcaatgatctgttgcttgatttgattattgt 20890950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 32 - 286
Target Start/End: Complemental strand, 13172636 - 13172382
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||| ||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  13172636 atcaaatcaccaatgatatgttgtttgatttggttattgtcctaggagggaacaatttcaaatccattccttgtatagagaaataccagtgtagtcacaa 13172537  T
Q  132 ctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaac 231  Q
     |||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||| |||| ||||  ||| ||||||||| |    
T  13172536 ttgttgtcttgtactattgcagatatgaggagtggagtagtggaggtagtggttgtacaattgtactatgtccatttcatgcgatctcaagtggataagc 13172437  T
Q  232 atccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    ||||||||||||| |||| ||||||  ||||||||||| |||||||||| |||||    
T  13172436 atccaatgccttctaattactctgaaatagtcgttgctccaggcttctactcctt 13172382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 32 - 288
Target Start/End: Complemental strand, 7488188 - 7487934
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  7488188 atcaaatcaccaatgatctgttgcttgatttggttattgtcctaagagggaacaatttcaaatccattccatgtatagaggaataccagcttagtcacag 7488089  T
Q  132 ctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaa 230  Q
     ||||| || |||||||||||| | |  |  |   |||||||| || | ||||||||||| ||||||||| | | ||| |||||| ||  |||||||||     
T  7488088 ttgttgttcatgtactattgcatatacaa--aacagagtagtggagatagtggttgtacagttgtactattttccttttctgcgctcttcagtggataag 7487991  T
Q  231 catccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||||||||||| |||||||| |||||| ||||| |||| || ||||||||||    
T  7487990 catccaatgccttcaaaatcctctgaattagtcattgctccagg-ttttattccttct 7487934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 5035261 - 5035504
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||  ||||||||||  ||| ||||    
T  5035261 aatcaacaatgatctgttgcttgatttggttattgtcctaggagggaacaatttcaaattcattccttgaatagagaataaccagcgtagatacaactgt 5035360  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | |||||||||||| |||| |||| ||||||||||          ||||| ||||||||||||||||| ||||||| ||| ||  ||||||||| |||||    
T  5035361 tatcttgtactattacagatatgaagagtggagta---------atggttatacaattgtactatgtcattttcctacgctcttcagtggataagcatcc 5035451  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||| ||||  |||||  ||| ||||| | ||||||| ||||||||||    
T  5035452 aatgccttctaatttatctgaaataggcgttgttccaggcttttattccttct 5035504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 36 - 288
Target Start/End: Complemental strand, 16307998 - 16307756
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||| || |||| |||| |||||||||||||||||||| | ||| ||||||||||||| ||||||||| ||||||||  ||||| |||||||||  |||    
T  16307998 aatcatcattgatttgtttcttgatttggttattgtcctaggagg-aacaatttcaaattcattccttgaatagagaataaccagtgtagtcacaattgt 16307900  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | | |||||||| |||| |||||||||||  |||||||         |||||||||||||||||||||||||||||| || ||  ||||||||| |||||    
T  16307899 tatgttgtactactgcaaacatgaggagttaagtagtg---------gttgtacaattgtactatgtccttttcctgtgctcttcagtggataagcatcc 16307809  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||| ||||| ||| |  ||||||||||| |||||||| |||||||||    
T  16307808 aatgccttctaattcatctaaaatagtcgttgctccaggcttccattccttct 16307756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 14304482 - 14304384
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcaca 130  Q
    |||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  14304482 atcaaaacaccaatgatttgttgcttgatttggttattgtcctaagagggaacaatttcaaattcattccttgtatagagaattaccagcgtagtcaca 14304384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 288
Target Start/End: Original strand, 16411870 - 16412124
Alignment:
Q  35 aaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctg 134  Q
    |||||||||||||||||||||||||| |||||||||||||   ||||||||| |||||||||| |||||||||||||| ||| || ||||||||    ||    
T  16411870 aaatcaccaatgatctgttgcttgatgtggttattgtcctaatagggaacaagttcaaatccactccttgtatagagagataacaacgtagtcattattg 16411969  T
Q  135 ttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataaaca 232  Q
    ||| |||||||||||||||||||  |    | |||||||| || |  ||||||||||||||||||| ||||||||||   ||| ||  |  | |||| ||    
T  16411970 ttgttcttgtactattgcagacacaa--catagagtagtggagataatggttgtacaattgtactattgtccttttcgaacgctcttcaaagaataagca 16412067  T
Q  233 tccaatgccttcaaattcctctgatttagtcgttgcttcaggcttc-tattccttct 288  Q
    |||||||||||  |||| ||||||  ||||||||||| |||||||| ||||||||||    
T  16412068 tccaatgcctttcaatttctctgaaatagtcgttgctccaggcttcttattccttct 16412124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 141 - 288
Target Start/End: Complemental strand, 9064349 - 9064203
Alignment:
Q  141 tgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgc 240  Q
    ||||||| |||| |||||||||||||||||||| || |  |||||||||||||||||||||| ||||| |||||| ||  ||||||||| ||| ||||||    
T  9064349 tgtactactgcaaacatgaggagtggagtagtggag-taatggttgtacaattgtactatgttctttttctgcgctcttcagtggataagcattcaatgc 9064251  T
Q  241 cttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||| ||||||||  |  ||||||||||| |||||||| |||||||||    
T  9064250 cttctaattcctcataaatagtcgttgctccaggcttccattccttct 9064203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 32 - 288
Target Start/End: Complemental strand, 18361856 - 18361610
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaat-accagcgtagtcaca 130  Q
    |||||||||| | ||||||||||||||||||||||| |||||| | |||||| ||||| ||||||||||||||| | ||||| | |||||||||| ||||    
T  18361856 atcaaatcactagtgatctgttgcttgatttggttaatgtcctaggagggaataatttgaaatccattccttgtttggagaattgaccagcgtagacaca 18361757  T
Q  131 gctgttgtcttgtactat-tgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactat-gtccttttcctgcgccctctagtggata 228  Q
      ||| ||   ||||||  ||||  |||||  |||||| |||||         |||||||||||||||||| ||||||| |||||||  | |||||||||    
T  18361756 aatgtagta--gtactacgtgcaaccatgat-agtggaatagtg---------gttgtacaattgtactattgtccttt-cctgcgctttttagtggata 18361670  T
Q  229 aacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    | |||| ||||||||| |||||||||||  |||| ||||||||| |||||||||||||||    
T  18361669 agcatctaatgccttctaattcctctgaaatagttgttgcttcaagcttctattccttct 18361610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 256
Target Start/End: Complemental strand, 18048026 - 18047895
Alignment:
Q  116 accagcgtagtcacagctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgc 215  Q
    |||||||||| ||||| |||| | ||||||||||||| |||||| ||||||||||||          |||||||||||||||||||| |||||| |||||    
T  18048026 accagcgtagacacagttgttatgttgtactattgcaaacatgaagagtggagtagtt---------gttgtacaattgtactatgttcttttcttgcgc 18047936  T
Q  216 cctctagtggataaacatccaatgccttcaaattcctctga 256  Q
     ||  || |||||| ||| |||||||||| |||||||||||    
T  18047935 tcttcagaggataagcattcaatgccttctaattcctctga 18047895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 13018785 - 13018720
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||||||||||||||||||||||   | ||| ||||||||||||||||||    
T  13018785 aatcaccaatgatcttttgcttgatttggttattgtcctatgaaggatcaatttcaaatccattcc 13018720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 104
Target Start/End: Complemental strand, 9064423 - 9064355
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttg 104  Q
    |||||| |||||||||||||||||||||||||||||| |   |||||| |||||||||| |||||||||    
T  9064423 aatcacgaatgatctgttgcttgatttggttattgtcttaagagggaagaatttcaaattcattccttg 9064355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 288
Target Start/End: Complemental strand, 16105130 - 16105022
Alignment:
Q  181 tggttgtacaattgtactat-gtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttct 279  Q
    |||||||||||||||| ||| ||| ||||| ||||| ||  | ||||||| |||||||||||||| ||||||| | |  ||||||||||| ||||||| |    
T  16105130 tggttgtacaattgtaatattgtcattttcttgcgctcttcaatggataagcatccaatgccttctaattcctataaaatagtcgttgctccaggcttat 16105031  T
Q  280 attccttct 288  Q
    |||||||||    
T  16105030 attccttct 16105022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 2913888 - 2913817
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| ||||||||||||||  | ||| |||||||||||||||||| |||||    
T  2913888 aatcaccaatgatcttttgcctgatatggttattgtcctctgaaggatcaatttcaaatccattccatgtat 2913817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 13034122 - 13034057
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| ||||||||||||||||||   | ||| ||||||||||||||||||    
T  13034122 aatcaccaatgatcttttgcctgatttggttattgtcctatgaaggatcaatttcaaatccattcc 13034057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 16310187 - 16310122
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| ||||||||| |||||||||||||   | ||| ||||||||||||||||||    
T  16310187 aatcaccaatgatcttttgcttgatatggttattgtcctaagaaggatcaatttcaaatccattcc 16310122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 18056518 - 18056457
Alignment:
Q  52 ttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaa 113  Q
    |||||| || |||||||||||||   ||||||||||||||||| ||||||||||||||||||    
T  18056518 ttgctttatatggttattgtcctacgagggaacaatttcaaattcattccttgtatagagaa 18056457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 13302689 - 13302754
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  13302689 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 13302754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 15088427 - 15088492
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||| | |||| |||| ||||||||||||||  | ||| ||||||||||||||||||    
T  15088427 aatcaccaatgatattttgcctgatatggttattgtcctctgaaggatcaatttcaaatccattcc 15088492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 28408917 - 28408982
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    |||||||||| |||| |||  |||| |||||||||||||| || ||| ||||||||||||||||||    
T  28408917 aatcaccaataatcttttgtctgatatggttattgtcctctaaaggatcaatttcaaatccattcc 28408982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 14426425 - 14426483
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaat 94  Q
    ||||||||||||||| |||| |||| ||||||||||||| | |  ||||||||||||||    
T  14426425 aatcaccaatgatcttttgcctgatatggttattgtcctaggaatgaacaatttcaaat 14426483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 2499916 - 2499981
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||  || | |||| |||||||||||||| ||  || ||||||||||||||||||    
T  2499916 aatcaccaatgatcattttcctgatatggttattgtcctctaaatgatcaatttcaaatccattcc 2499981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 4494455 - 4494520
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| || | |||| |||||||||||||   | ||| ||||||||||||||||||    
T  4494455 aatcaccaatgatctttttcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 4494520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 9069440 - 9069505
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||| ||||| |||| |||| |||||||||||||  || ||| ||| ||||||||||||||    
T  9069440 aatcaccaacgatcttttgcctgatatggttattgtcctataaaggatcaaattcaaatccattcc 9069505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 10254610 - 10254541
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgt 105  Q
    ||||| || |||| |||||||||||||||||| ||||||   |||||| ||||| ||| |||||||||||    
T  10254610 aatcaacattgatttgttgcttgatttggttaatgtcctatgagggaataatttgaaaaccattccttgt 10254541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 10883453 - 10883388
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||| ||||||||||||||    
T  10883453 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaaattcaaatccattcc 10883388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 13138175 - 13138110
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||     ||| ||||||||||||||||||    
T  13138175 aatcaccaatgatcttttgcctgatatggttattgtcctatgtaggatcaatttcaaatccattcc 13138110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 13879982 - 13880047
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    |||||||||| |||| || | |||| ||||||||||||||  | ||| ||||||||||||||||||    
T  13879982 aatcaccaataatctttttcctgatatggttattgtcctctgaaggatcaatttcaaatccattcc 13880047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 19237313 - 19237252
Alignment:
Q  44 atgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgt 105  Q
    ||||||| |||| ||||||||||||||||||   | ||| ||||||||||| ||||||||||    
T  19237313 atgatcttttgcctgatttggttattgtcctatgaaggatcaatttcaaatgcattccttgt 19237252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 21692165 - 21692230
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||| ||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  21692165 aatcaccgatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 21692230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 21695279 - 21695344
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    |||||||||| |||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  21695279 aatcaccaataatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 21695344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 105
Target Start/End: Original strand, 25807264 - 25807333
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgt 105  Q
    ||||||||||||||| || ||||||||||||| |||||| | | |||| ||||| |||| ||||| ||||    
T  25807264 aatcaccaatgatcttttacttgatttggttaatgtcctaggaaggaataatttgaaattcattcgttgt 25807333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 41842553 - 41842488
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||| ||||   | ||| ||||||||||||||||||    
T  41842553 aatcaccaatgatcttttgcctgatatggttattatcctatgaaggatcaatttcaaatccattcc 41842488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 44466941 - 44467006
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| | || |||||||||||||   | ||| ||||||||||||||||||    
T  44466941 aatcaccaatgatcttttgcctaatatggttattgtcctatgaaggatcaatttcaaatccattcc 44467006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 11792785 - 11792849
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattc 100  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| |||||||| ||||||||    
T  11792785 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcatatccattc 11792849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 272
Target Start/End: Complemental strand, 39284650 - 39284606
Alignment:
Q  228 aaacatccaatgccttcaaattcctctgatttagtcgttgcttca 272  Q
    ||||||||||||||||||||||| | ||| |||||||||| ||||    
T  39284650 aaacatccaatgccttcaaattcatttgaattagtcgttgtttca 39284606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 2e-83; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 23054247 - 23054499
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||| ||||| ||||||||||||||||||| | ||||||||||||||| | |||||| ||||||||||||||||||||||||||||| |||    
T  23054247 aatcaccaatgatttgttgtttgatttggttattgtcctaggagggaacaatttcaatttcattccatgtatagagaaataccagcgtagtcacaggtgt 23054346  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    |||||||||||||||||||||  | ||   ||||||||||||| |||||||||||||||||||||||||||||||||||| ||  | |||||||||||||    
T  23054347 tgtcttgtactattgcagacacaaagaacagagtagtgaaggtagtggttgtacaattgtactatgtccttttcctgcgctcttcattggataaacatcc 23054446  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||| |||| ||||||  ||||||||||| ||||||||||||||||||    
T  23054447 aatgccttctaatttctctgaaatagtcgttgctccaggcttctattccttct 23054499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 36 - 256
Target Start/End: Complemental strand, 18130210 - 18129999
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||| ||||||||  |||||||||| |||| ||||    
T  18130210 aatcaccaatgatctgttgcttgatttggttattgtcctaggagggaacaatttcaaattcattcattgaatagagaataaccagcgtagacacaactgt 18130111  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | |||||||||||||||||||||| ||||||||||         ||||||||||||||||||| |||||||||| | ||| ||  ||||||||| |||||    
T  18130110 tatcttgtactattgcagacatgaagagtggagta---------gtggttgtacaattgtactgtgtccttttcatacgctcttcagtggataagcatcc 18130020  T
Q  236 aatgccttcaaattcctctga 256  Q
    ||| ||||| |||||||||||    
T  18130019 aataccttctaattcctctga 18129999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 37 - 288
Target Start/End: Complemental strand, 26280256 - 26280007
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaat-accagcgtagtcacagctgt 135  Q
    |||||||||||| |||||||||||||||||| |||| | ||||||||||||||||||| |||||||||| | || || | |||||||||| |||| || |    
T  26280256 atcaccaatgatatgttgcttgatttggttaatgtcatagaagggaacaatttcaaattcattccttgtttggacaattcaccagcgtagacacaactat 26280157  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
      ||   ||||||||||||||||| ||||||||||  | || | |||||||||||||||||||||||||||||| ||| | ||  | ||||||| |||||    
T  26280156 a-tcaa-tactattgcagacatgaagagtggagtaacggag-tagtggttgtacaattgtactatgtccttttcatgcactcttcaatggataagcatcc 26280060  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||| |||| ||||| |||||  ||||||||||| ||||||||||||||||||    
T  26280059 aatgacttctaattcatctgaaatagtcgttgctccaggcttctattccttct 26280007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 37 - 298
Target Start/End: Complemental strand, 18517360 - 18517108
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgtt 136  Q
    |||||||||||| ||||||||||| || |||||||||| | | ||||||||||||||| ||||   |  ||||||||  ||||||||||  ||| |||||    
T  18517360 atcaccaatgatttgttgcttgatatgattattgtcctaggaaggaacaatttcaaattcatttaattaatagagaataaccagcgtagatacaactgtt 18517261  T
Q  137 gtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcca 236  Q
     ||||||||||||| |||||||| |||||||||| ||         ||||||||||||||||||||||||||| ||||| ||  | ||  ||| ||||||    
T  18517260 atcttgtactattgtagacatgaagagtggagtaatg---------gttgtacaattgtactatgtccttttcttgcgctcttcaatgattaagcatcca 18517170  T
Q  237 atgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttctctgatgatgt 298  Q
    |||||||| ||||||| |||  ||||||||||| |||||||||||||||||| | |||||||    
T  18517169 atgccttctaattcctttgaaatagtcgttgctccaggcttctattccttctgtaatgatgt 18517108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 20909284 - 20909403
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||| |||||||||||||||||||||||||   | |||||||||||||||| ||||| ||||||||||||||||||||||||||||     
T  20909284 atcaaatcaccaatgatatgttgcttgatttggttattgtcctaagaaggaacaatttcaaatctattccatgtatagagaaataccagcgtagtcacaa 20909383  T
Q  132 ctgttg-tcttgtactattg 150  Q
    |||||| |||||||||||||    
T  20909384 ctgttgttcttgtactattg 20909403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 283
Target Start/End: Original strand, 17018456 - 17018707
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||||||||||||||||| | |||| ||||   | ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  17018456 atcaaatcaccaatgatctgttgcttgattttgatattatcctatgaaggaacaatttcaaatccattccaagtatagaggaataccagcgtagtcacag 17018555  T
Q  132 ctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataa 229  Q
    || ||| |||||||||||||||||||  |  |    |||||||||| | ||||||||||| ||| |||| |||||||||||  ||  ||| |  | ||||    
T  17018556 ctattgttcttgtactattgcagacacaa--aacaaagtagtgaagatagtggttgtacacttgcactattgtccttttccaacgttctccaaagaataa 17018653  T
Q  230 acatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattc 283  Q
     |||||||||| ||| |||||||||||  |||| |||||| || ||||||||||    
T  17018654 gcatccaatgctttccaattcctctgaagtagttgttgctccaagcttctattc 17018707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 156
Target Start/End: Original strand, 18614778 - 18614903
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||||| ||| |||||||||||||| ||||   | |||||||||||||||||||||| ||||||||| |||| |||||||||||||     
T  18614778 atcaaatcaccaatgatcttttgtttgatttggttattatcctatgaaggaacaatttcaaatccattccatgtatagaggaatatcagcgtagtcacaa 18614877  T
Q  132 ctgttg-tcttgtactattgcagaca 156  Q
    |||||| |||||||||||||||||||    
T  18614878 ctgttgttcttgtactattgcagaca 18614903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 36 - 286
Target Start/End: Complemental strand, 20110150 - 20109897
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||  ||| ||||||||||||||||||||| ||| | |||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||  |||    
T  20110150 aatcaccatcgatatgttgcttgatttggttattgccctaggagggaataatatcaaatctattccttgtatagagaattaccagcgtagtcacatatgt 20110051  T
Q  136 tgtcttgtac---tattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaaca 232  Q
    ||||||||||   ||||||| |||  |  |    | ||||| || | |||||||||||||||||||||||||||||| ||| | ||  | | ||| |  |    
T  20110050 tgtcttgtactattattgcatacacaaataacataatagtggagatggtggttgtacaattgtactatgtccttttcttgcactcttcaatagatgagta 20109951  T
Q  233 tccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    |||||||||||| ||||||| | |  ||||||||||| || |||||||||||||    
T  20109950 tccaatgccttctaattcctttaaaatagtcgttgctccatgcttctattcctt 20109897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 139 - 288
Target Start/End: Complemental strand, 21683280 - 21683141
Alignment:
Q  139 cttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaat 238  Q
    |||||||||||||||||||||| ||||||||||||         ||| ||||||||||||||||||||||||||||| ||  | ||||||| ||||||||    
T  21683280 cttgtactattgcagacatgag-agtggagtagtg---------gttatacaattgtactatgtccttttcctgcgctcttcactggataagcatccaat 21683191  T
Q  239 gccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||| ||||||| |||  ||||||||||||||| ||||||||||||||    
T  21683190 gccttctaattcctttgaaatagtcgttgcttcagacttctattccttct 21683141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 16869988 - 16870064
Alignment:
Q  181 tggttgtacaattgtactatgtcctttt-cctgcgccctctagtggataaacatccaatgccttcaaattcctctga 256  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||||| |||||||||||||| |||||||||||    
T  16869988 tggttgtacaattgtactatgtcctttttcctgcgctctttagtggataagcatccaatgccttctaattcctctga 16870064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 36 - 166
Target Start/End: Original strand, 9346652 - 9346782
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    |||||||||| || ||||||||||||||||||||||||| | ||| ||| ||||||||| ||||||||| ||  ||||  | |||||||| ||||| |||    
T  9346652 aatcaccaataatatgttgcttgatttggttattgtcctaggaggaaactatttcaaattcattccttgaatgaagaataatcagcgtagacacagttgt 9346751  T
Q  136 tgtcttgtactattgcagacatgaggagtgg 166  Q
    | |||||||| | |||| ||| |||||||||    
T  9346752 tatcttgtacgactgcaaacacgaggagtgg 9346782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 288
Target Start/End: Original strand, 9346779 - 9346884
Alignment:
Q  180 gtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttct 279  Q
    ||||||||||||||||||| |||||||||  ||||| || |||||||||| |||||||||||||| ||||  | |||  ||||||||||| ||||||||     
T  9346779 gtggttgtacaattgtactgtgtcctttt-atgcgctctttagtggataagcatccaatgccttctaatt--tttgaaatagtcgttgctccaggcttcc 9346875  T
Q  280 attccttct 288  Q
    ||| |||||    
T  9346876 atttcttct 9346884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 288
Target Start/End: Complemental strand, 1090590 - 1090490
Alignment:
Q  190 aattgtactatgtccttttcc-tgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttg-cttcaggcttctattccttc 287  Q
    ||||||||||||||||||| | ||||| || |||||||||| |||||||||||||||||||  ||||| |||| ||||| || | |||||| ||||||||    
T  1090590 aattgtactatgtccttttgcatgcgctctttagtggataagcatccaatgccttcaaatttatctgaattagccgttgcctccgggcttccattccttc 1090491  T
Q  288 t 288  Q
    |    
T  1090490 t 1090490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 18896796 - 18896673
Alignment:
Q  35 aaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctg 134  Q
    |||||||||||||||| |||| |||||||||||||| | |   |  || ||||||||||||||||||  |||| |||||| ||| | | || |||| |||    
T  18896796 aaatcaccaatgatctattgcctgatttggttattgccatgtgaatgatcaatttcaaatccattccaagtatggagaaacaccggtgcagacacaactg 18896697  T
Q  135 ttgt-cttgtactattgcagacat 157  Q
    |||| |||||||||||||||||||    
T  18896696 ttgttcttgtactattgcagacat 18896673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 20954672 - 20954601
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| ||||||||||||||  | ||| |||||||||||||||||| |||||    
T  20954672 aatcaccaatgatcttttgcctgatatggttattgtcctctgaaggatcaatttcaaatccattccatgtat 20954601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 2268412 - 2268477
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||| ||||||||| |||| |||| |||||||||||||| || ||| ||||||||||||||||||    
T  2268412 aatcatcaatgatcttttgcctgatatggttattgtcctccaaaggatcaatttcaaatccattcc 2268477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 22201935 - 22201870
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| ||||||||| |||||||||||||   | ||| ||||||||||||||||||    
T  22201935 aatcaccaatgatcttttgcttgatatggttattgtcctatgaaggatcaatttcaaatccattcc 22201870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 26703433 - 26703506
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgt 105  Q
    ||||||||||||||||| |||||||||||||||||| |||| | | | |||| ||||| |||| ||||||||||    
T  26703433 atcaaatcaccaatgatttgttgcttgatttggttaatgtcataggaaggaataatttgaaattcattccttgt 26703506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 1577748 - 1577819
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| ||||||||||||||  | | | |||||||||||||||||| |||||    
T  1577748 aatcaccaatgatcttttgcctgatatggttattgtcctctgaagaatcaatttcaaatccattccatgtat 1577819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 19717405 - 19717476
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| || | |||| ||||||||||||||  | ||| |||||||||||||||||| |||||    
T  19717405 aatcaccaatgatctttttcctgatatggttattgtcctctgaaggatcaatttcaaatccattccatgtat 19717476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 22427556 - 22427493
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccatt 99  Q
    ||||||||||||||| ||||||||| |||||||||||||   | ||| ||||||||||| ||||    
T  22427556 aatcaccaatgatcttttgcttgatatggttattgtcctatgaaggatcaatttcaaatgcatt 22427493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Complemental strand, 24227974 - 24227931
Alignment:
Q  245 aaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||||||||| |||||||||||| |||||||| |||||||||    
T  24227974 aaattcctctgaattagtcgttgctccaggcttcaattccttct 24227931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 1900226 - 1900288
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccat 98  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| |||||||||||||||    
T  1900226 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccat 1900288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 19170533 - 19170495
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcct 74  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  19170533 aatcaccaatgatcttttgcttgatttggttgttgtcct 19170495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 22153738 - 22153804
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcct 102  Q
    ||||||||||||||| |||| |||| |||||||||||||   |  || |||||||||||||||||||    
T  22153738 aatcaccaatgatcttttgcctgatatggttattgtcctatgaatgatcaatttcaaatccattcct 22153804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 29215678 - 29215736
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaat 94  Q
    ||||||||||||||| |||| |||| |||||||||||||  || ||| |||||||||||    
T  29215678 aatcaccaatgatcttttgcctgatatggttattgtcctataaaggatcaatttcaaat 29215736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 39201189 - 39201151
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcct 74  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  39201189 aatcaccaatgatcttttgcttgatatggttattgtcct 39201151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 12624755 - 12624690
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||  |||| |||||||||||||   | ||| ||||||||||||||||||    
T  12624755 aatcaccaatgatcttttgtctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 12624690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 22465008 - 22464943
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| ||||||    
T  22465008 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatgcattcc 22464943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 23036728 - 23036663
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| || | |||| |||||||||||||   | ||| ||||||||||||||||||    
T  23036728 aatcaccaatgatctttttcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 23036663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 38282448 - 38282513
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    |||||||||||| || |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  38282448 aatcaccaatgaccttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 38282513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 21028675 - 21028739
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattc 100  Q
    ||||||||||||||| |||| |||| |||||||||||||   | |||  ||||||||||||||||    
T  21028675 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggattaatttcaaatccattc 21028739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 1e-78; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 18557894 - 18558146
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||| || ||||| ||||||||||||||||  |||    
T  18557894 aatcaccaatgatctgttgcttgatttggttattgtcttaggagggaacaatttcaaatccattccttgaatggagaattaccagcgtagtcacaattgt 18557993  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    ||| ||| |||||||||||||| ||||||||| ||||| || |  ||||||||||||||||||||||||||||||||| | ||  |||||||||||||||    
T  18557994 tgttttgaactattgcagacataaggagtggaatagtggagatattggttgtacaattgtactatgtccttttcctgcactcttcagtggataaacatcc 18558093  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||| |||| ||||||| |||||||||||  |||||| ||||||||||    
T  18558094 aatgccttctaatttctctgatatagtcgttgctctaggcttatattccttct 18558146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 36 - 288
Target Start/End: Complemental strand, 17917101 - 17916849
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||| ||||||| ||||||||||||||||||||||| | | |||||||||||| |||| ||||||||| ||||||||  | ||||||||||||| |||     
T  17917101 aatcatcaatgatatgttgcttgatttggttattgtcttaggagggaacaattttaaattcattccttgaatagagaatgatcagcgtagtcacaactga 17917002  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | ||||||| || |||||||| |||||||||||||||| |||  ||| |||||||||||||||||||| |||||||| || || |||||||||| | |||    
T  17917001 tatcttgtattactgcagacaagaggagtggagtagtggaggcagtgattgtacaattgtactatgtcattttcctgtgctctttagtggataagcttcc 17916902  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||| ||||||||| |  ||||||||||| |||||||| |||||||||    
T  17916901 aatgccttctaattcctctaaaatagtcgttgctccaggcttccattccttct 17916849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 275
Target Start/End: Original strand, 18772540 - 18772734
Alignment:
Q  81 gaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtc 179  Q
    |||||||||||||||||||||  | |||||| |||||||||||||||||| |||||| ||||||| |||||||||||  |  |   |||||||| ||||     
T  18772540 gaacaatttcaaatccattccaagaatagaggaataccagcgtagtcacaactgttgttcttgtattattgcagacacaa--aaaagagtagtggaggta 18772637  T
Q  180 gtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggc 275  Q
     |||||||||| |||||||| |||||||||||  ||  ||| |  | |||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  18772638 atggttgtacatttgtactattgtccttttccaacgttctccaaagaataagcatccaatgccttcaaattcctctgatttagtcgttgctccaggc 18772734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 288
Target Start/End: Complemental strand, 19505716 - 19505467
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaat-accagcgtagtcacagctgt 135  Q
    ||||||||||||||||||||||||||||||| |||||| | |||||| ||||| |||| |||||||||| |  | || | ||||| |||| |||| ||||    
T  19505716 atcaccaatgatctgttgcttgatttggttaatgtcctaggagggaataattttaaattcattccttgtttgcataattaaccagtgtagacacaactgt 19505617  T
Q  136 tgtcttgtactat-tgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataaacat 233  Q
     |    ||||||| |||||||| ||  |||||||||||| | || |||||||||||||||||||| ||||| |||| || || || |||||| ||| |||    
T  19505616 ag--cagtactatatgcagacaaga-aagtggagtagtgga-gtagtggttgtacaattgtactattgtcc-tttcatgagctctatagtgggtaagcat 19505522  T
Q  234 ccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
     |||||||||| |||||||||||  ||| |||||||  ||| |||||||||||||    
T  19505521 tcaatgccttctaattcctctgaaatagccgttgctcgaggattctattccttct 19505467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 156
Target Start/End: Original strand, 26832907 - 26833032
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||| |||||| |||| ||||||||||| |   | ||||||||||||||||||||||  |||||||  ||||||| |||| ||||||    
T  26832907 atcaaatcaccaatgatttgttgcctgatatggttattgtcttatgaaggaacaatttcaaatccattccaagtatagatgaataccatcgtattcacag 26833006  T
Q  132 ctgttg-tcttgtactattgcagaca 156  Q
     ||||| |||||||||||| ||||||    
T  26833007 atgttgttcttgtactattacagaca 26833032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 284
Target Start/End: Original strand, 12193920 - 12194024
Alignment:
Q  180 gtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttct 279  Q
    |||||||||||| |||||| |||| ||||||||||| ||  | |||| || |||||||||||||| ||||| |||||  |||| |||| | |||||||||    
T  12193920 gtggttgtacaactgtactttgtcattttcctgcgctcttcaatggacaagcatccaatgccttccaattcttctgaaatagttgttgttccaggcttct 12194019  T
Q  280 attcc 284  Q
    |||||    
T  12194020 attcc 12194024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 284
Target Start/End: Original strand, 12438348 - 12438452
Alignment:
Q  180 gtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttct 279  Q
    |||||||||||| |||||| |||| ||||||||||| ||  | |||| || |||||||||||||| ||||| |||||  |||| |||| | |||||||||    
T  12438348 gtggttgtacaactgtactttgtcattttcctgcgctcttcaatggacaagcatccaatgccttccaattcttctgaaatagttgttgttccaggcttct 12438447  T
Q  280 attcc 284  Q
    |||||    
T  12438448 attcc 12438452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 16681580 - 16681515
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| ||||||||||||||  | ||| ||||||||||||||||||    
T  16681580 aatcaccaatgatctattgcctgatatggttattgtcctctgaaggatcaatttcaaatccattcc 16681515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 19956618 - 19956549
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  19956618 atcaaatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 19956549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 1210026 - 1209931
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaat-accagcgtagtcacag 131  Q
    ||||||||||||||||| ||||||||||||| |||| | | |||||| ||||| |||| ||||| |||| | ||||| | |||||||||| |||||    
T  1210026 atcaccaatgatctgtttcttgatttggttaatgtcataggagggaataatttgaaattcattcattgtttggagaattaaccagcgtagacacag 1209931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 39693409 - 39693480
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| ||||||||||||||  | ||| ||||||||||||| |||| |||||    
T  39693409 aatcaccaatgatcttttgcctgatatggttattgtcctctgaaggatcaatttcaaatcctttccatgtat 39693480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 1208709 - 1208651
Alignment:
Q  231 catccaatgccttcaaattcctctgatttagtcgtt-gcttcaggcttctattccttct 288  Q
    ||||||||||||||||||||||||||  |||||||| ||  ||||||||||||||||||    
T  1208709 catccaatgccttcaaattcctctgaaatagtcgttggccccaggcttctattccttct 1208651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 22461918 - 22461876
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcct 74  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  22461918 atcaaatcaccaatgatcttttgcctgatttggttattgtcct 22461876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 16207180 - 16207244
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcct-cgaagggaacaatttcaaatccattc 100  Q
    ||||||||||||||| |||| |||| ||||||||||||| |||| ||| |||||||||||||||||    
T  16207180 aatcaccaatgatcttttgcatgatatggttattgtcctacgaa-ggatcaatttcaaatccattc 16207244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 21932757 - 21932822
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  21932757 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 21932822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 43644770 - 43644835
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  43644770 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 43644835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 288
Target Start/End: Original strand, 12541691 - 12541755
Alignment:
Q  224 ggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||| ||||||||||||| ||||||||| |  |||||||| || |||||||||||| |||||    
T  12541691 ggataaaaatccaatgccttctaattcctctaaaatagtcgtttctccaggcttctatttcttct 12541755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 25850281 - 25850233
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaac 84  Q
    ||||| ||||||| ||||||||||||||||||||||||| | |||||||    
T  25850281 aatcatcaatgatttgttgcttgatttggttattgtcctaggagggaac 25850233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 1209893 - 1209838
Alignment:
Q  180 gtggttgtacaattgtactatg-tccttttcctgcgccctctagtggataaacatc 234  Q
    |||||||||||||||||||||  |||||||||||||| || |||||||||| ||||    
T  1209893 gtggttgtacaattgtactattatccttttcctgcgctctttagtggataagcatc 1209838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 23772454 - 23772497
Alignment:
Q  245 aaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||||||||| |||||||||||| |||||||| |||||||||    
T  23772454 aaattcctctgaattagtcgttgctccaggcttcaattccttct 23772497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 29693189 - 29693260
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||| | |||| |||| |||||||||||||   | ||| |||||||||||||||||| |||||    
T  29693189 aatcaccaatgatattttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattccatgtat 29693260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 30421706 - 30421640
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcct 102  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| |||||||    
T  30421706 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatgcattcct 30421640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 12193788 - 12193845
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaat 94  Q
    |||||||| ||| ||||||||||||||||| ||||||| | || ||| ||||||||||    
T  12193788 atcaccaacgatttgttgcttgatttggttgttgtcctaggagagaataatttcaaat 12193845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 12438216 - 12438273
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaat 94  Q
    |||||||| ||| ||||||||||||||||| ||||||| | || ||| ||||||||||    
T  12438216 atcaccaacgatttgttgcttgatttggttgttgtcctaggagagaataatttcaaat 12438273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 12758040 - 12757975
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| ||   |||| ||||||||||||||  | ||| ||||||||||||||||||    
T  12758040 aatcaccaatgatcttttttctgatatggttattgtcctctgaaggatcaatttcaaatccattcc 12757975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 16188858 - 16188923
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||| ||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  16188858 aatcaccaacgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 16188923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 17442084 - 17442019
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||  |||| |||| ||||||||||| ||  | ||| ||||||||||||||||||    
T  17442084 aatcaccaatgatcgtttgcctgatatggttattgtcatctgaaggatcaatttcaaatccattcc 17442019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 17701614 - 17701679
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| ||||| |||||||   | ||| ||||||||||||||||||    
T  17701614 aatcaccaatgatcttttgcctgatatggttgttgtcctatgaaggatcaatttcaaatccattcc 17701679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 19943109 - 19943174
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| |||||||||||| |||||    
T  19943109 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatctattcc 19943174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 20382671 - 20382606
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| |||||| |||||||||||    
T  20382671 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttaaaatccattcc 20382606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 23185504 - 23185439
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| ||||||    
T  23185504 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatgcattcc 23185439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 25163944 - 25164009
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||| ||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  25163944 aatcatcaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 25164009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 33082740 - 33082805
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||  |||| ||||||||||||||||||   | ||| ||||||||||| ||||||    
T  33082740 aatcaccaatgatcctttgcctgatttggttattgtcctatgaaggatcaatttcaaatgcattcc 33082805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 200
Target Start/End: Original strand, 17687984 - 17688020
Alignment:
Q  164 tggagtagtgaaggtcgtggttgtacaattgtactat 200  Q
    |||||||||| |||| |||||||||||||||||||||    
T  17687984 tggagtagtggaggtagtggttgtacaattgtactat 17688020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 6e-74; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 23589590 - 23589842
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    |||||||||||||||||||||||||||||||||||||||   || ||| |||||||||||||||||||||||||||||  |||||||||||||||  |||    
T  23589590 aatcaccaatgatctgttgcttgatttggttattgtcctacgagagaaaaatttcaaatccattccttgtatagagaataaccagcgtagtcacaattgt 23589689  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
     |||||||||||||| |||||  | ||||||||||||| | || ||||||||||||||||||||||||||||||||  || || |||||||||| |||||    
T  23589690 agtcttgtactattgtagacacaatgagtggagtagtggatgtagtggttgtacaattgtactatgtccttttcctatgctctttagtggataaccatcc 23589789  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||| |||||||||||  ||||||||||| ||||| || |||||||||    
T  23589790 aatgccttctaattcctctgaaatagtcgttgctccaggcatccattccttct 23589842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 43 - 286
Target Start/End: Complemental strand, 26120082 - 26119839
Alignment:
Q  43 aatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttgtcttg 142  Q
    |||||| |||| |||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||  |||||| |||||||||||||| |||||    
T  26120082 aatgatttgtttcttgatttggttattgtcctaggagggaacaatttcaaattcattccttgaatagagaataaccagcatagtcacagctgttatcttg 26119983  T
Q  143 tactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgcct 242  Q
    ||||  |||| |||||||||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||| ||  ||||||||| ||||||||||||    
T  26119982 tacttctgcaaacatgaggagtggagtagtggaggtagtggttgtacaattgtactatgtctttttcttgcgctcttcagtggataagcatccaatgcct 26119883  T
Q  243 tcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    || ||||||||| |  ||||||||||| |||||||| |||||||    
T  26119882 tctaattcctctaaaatagtcgttgctccaggcttccattcctt 26119839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 32 - 283
Target Start/End: Original strand, 16607387 - 16607638
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||||||||||||||||||||| ||||||||||||||||||   |  ||||||||||||||||||||| ||||| ||| |||||||||||||||||||    
T  16607387 atcaaatcaccaatgatctgttgcctgatttggttattgtcctatgaacgaacaatttcaaatccattccatgtatggaggaataccagcgtagtcacag 16607486  T
Q  132 ctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataa 229  Q
    |||||| ||||||||||||||| |||  |  ||  |||||||| || | ||||||||||| |||||||| |||||||||||  ||  ||| |  | ||||    
T  16607487 ctgttgttcttgtactattgcaaacacaa--agcagagtagtggagatagtggttgtacacttgtactattgtccttttccaacgttctccaaagaataa 16607584  T
Q  230 acatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattc 283  Q
     | |||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  16607585 gcttccaatgccttcaaattcctctgaattagccgttgctccaggcttctattc 16607638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 37 - 288
Target Start/End: Original strand, 20969089 - 20969326
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgtt 136  Q
    |||||||||||||||||||||||||||||||||||||| | |||||| |||||||||| ||||     |||||||||  |||||||||| ||||  ||||    
T  20969089 atcaccaatgatctgttgcttgatttggttattgtcctaggagggaataatttcaaattcatt-----tatagagaataaccagcgtagacacaattgtt 20969183  T
Q  137 gtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcca 236  Q
     ||||||||||||||||| |||  ||||||||||         ||||||||||||||||||||||||| |||||||| | ||  ||||||||| ||||||    
T  20969184 atcttgtactattgcagatatgcagagtggagta---------gtggttgtacaattgtactatgtccctttcctgcactcttaagtggataagcatcca 20969274  T
Q  237 atgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||| ||| ||||||||| |  ||||||||| |  |||||||||||||||||    
T  20969275 atgctttctaattcctcttaaatagtcgttgatgtaggcttctattccttct 20969326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 286
Target Start/End: Original strand, 34638330 - 34638575
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||| |||||||||| |||||||||||||||||||||||||   | ||||||||||||||||||||||  | ||||||  | |||||||| |  | ||    
T  34638330 atcaaaacaccaatgatttgttgcttgatttggttattgtcctatgaaggaacaatttcaaatccattccaagaatagagtgacaccagcgttgatatag 34638429  T
Q  132 ctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactat-gtccttttcctgcgccctctagtggataaa 230  Q
     |||| | ||||| |||||||||||||| |||||||||||||         |||||||||||| ||||| ||||||||| ||||| ||  ||||||||||    
T  34638430 ttgttatgttgtagtattgcagacatgaagagtggagtagtg---------gttgtacaattgcactattgtccttttc-tgcgctcttcagtggataaa 34638519  T
Q  231 catccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    |||||||||||||||||||||||||| |||| ||||||| |||||||| |||||||    
T  34638520 catccaatgccttcaaattcctctgaattagccgttgctccaggcttccattcctt 34638575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 37 - 288
Target Start/End: Complemental strand, 39799135 - 39798894
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgtt 136  Q
    ||||||||||||||||||||| |||||||||||||| | | |||||||||||| |||| |||||||||| | |||||  |||||||||| ||||| |||     
T  39799135 atcaccaatgatctgttgcttaatttggttattgtcttaggagggaacaatttgaaattcattccttgtttggagaacaaccagcgtagacacagttgta 39799036  T
Q  137 gtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcca 236  Q
    | |||||||| ||| |||||||| ||||||||||         ||||||||||||||| ||||||||| ||| |||||| ||  |||| |||| ||||||    
T  39799035 g-cttgtactgttgtagacatgaagagtggagta---------gtggttgtacaattgcactatgtcccttttctgcgctcttaagtgaataagcatcca 39798946  T
Q  237 atgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||| ||| |||| ||||||  ||||||||||| ||| ||| ||||||||||    
T  39798945 atgctttctaatttctctgaaatagtcgttgctccagccttttattccttct 39798894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 159
Target Start/End: Complemental strand, 2156535 - 2156411
Alignment:
Q  35 aaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctg 134  Q
    |||||| |||| |||||||||||||||||||||||||| |   | |||||||||||||||||||||||||||||||||| |||||||||||| ||| ||     
T  2156535 aaatcaacaattatctgttgcttgatttggttattgtcttgtgaaggaacaatttcaaatccattccttgtatagagaattaccagcgtagttacaacta 2156436  T
Q  135 ttgtcttgtactattgcagacatga 159  Q
    |||||||||||||| | ||||||||    
T  2156435 ttgtcttgtactatggtagacatga 2156411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 20567688 - 20567932
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||| | |||| ||||||||||||||||||||   ||| |||||||||||||||||||| ||||||||||   |||| |||||   ||| |||    
T  20567688 aatcaccaatgttttgtttcttgatttggttattgtcctatgaggaaacaatttcaaatccattccatgtatagagagtaaccaacgtaggtgcagttgt 20567787  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataaacatc 234  Q
      ||||||||| ||||||| |||  ||||||||||         |||||||||||||||||||| ||||||||||  |||| |   ||| ||||| ||||    
T  20567788 attcttgtactgttgcagatatggtgagtggagta---------gtggttgtacaattgtactattgtccttttctagcgctcatcagtcgataagcatc 20567878  T
Q  235 caatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||    
T  20567879 caatgccttcaaattcctctgaagtagtcgttgctccaggattgcattccttct 20567932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 288
Target Start/End: Original strand, 13692307 - 13692547
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgtt 136  Q
    ||||||||||||||||| |||||||||||||||||||| | | ||||||||||||||| ||||| |||  | |||||  |||||||||| |||| ||  |    
T  13692307 atcaccaatgatctgttacttgatttggttattgtcctaggaaggaacaatttcaaattcattcattgcttggagaacaaccagcgtagacacatct-at 13692405  T
Q  137 gtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcca 236  Q
      ||||||||||||||||||||| |||| |||||         ||||||||| ||||||||||||||||||| ||| || ||   |||||||| ||| ||    
T  13692406 aacttgtactattgcagacatgaagagtagagta---------gtggttgtataattgtactatgtcctttt-ctgtgctcttctgtggataagcattca 13692495  T
Q  237 atgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||| |||| ||||||||| |  ||||| |||||  |||||||||||||||||    
T  13692496 atgtcttctaattcctctaaaatagtcattgctcgaggcttctattccttct 13692547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 286
Target Start/End: Complemental strand, 17262992 - 17262747
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaatac-cagcgtagtcaca 130  Q
    |||||||||||||||||||||||||||||||||||| |||||| | | | || ||||| ||||| ||||||||| | ||||| ||  ||  |||| ||||    
T  17262992 atcaaatcaccaatgatctgttgcttgatttggttaatgtccttggaagaaataatttgaaatcaattccttgtttggagaattaatcaatgtagacaca 17262893  T
Q  131 gctgttgtcttgtactat-tgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactat-gtccttttcctgcgccctctagtggata 228  Q
     |||| |    ||||||| |||||||||||| ||||||||||||         |||||||||||||||||| ||||||| ||||||| ||  ||||||||    
T  17262892 actgtagca--gtactatatgcagacatgag-agtggagtagtg---------gttgtacaattgtactattgtcctttacctgcgctcttcagtggata 17262805  T
Q  229 aacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    | ||||||||||||||  ||||||||||  ||||| ||||| ||||||||||||||||    
T  17262804 agcatccaatgccttctcattcctctgaaatagtcattgctccaggcttctattcctt 17262747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 180 - 288
Target Start/End: Complemental strand, 31589133 - 31589025
Alignment:
Q  180 gtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttct 279  Q
    |||||||||||||||||||||||||||||||||||  ||  ||||||||  |||||||||||||  ||||||||||| ||||  |||||| |||||||||    
T  31589133 gtggttgtacaattgtactatgtccttttcctgcgttcttcagtggatacgcatccaatgccttttaattcctctgaattagctgttgctccaggcttct 31589034  T
Q  280 attccttct 288  Q
    |||||||||    
T  31589033 attccttct 31589025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 288
Target Start/End: Original strand, 27057336 - 27057444
Alignment:
Q  180 gtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttct 279  Q
    ||||||||||||||||| |||||||||||  ||||| ||  ||||||||  |||||||||||||| |||||||||||  ||||| |||||  || ||| |    
T  27057336 gtggttgtacaattgtattatgtcctttttttgcgctcttcagtggatagtcatccaatgccttctaattcctctgaaatagtcattgctctagtctttt 27057435  T
Q  280 attccttct 288  Q
    |||||||||    
T  27057436 attccttct 27057444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 180 - 288
Target Start/End: Complemental strand, 22586122 - 22586013
Alignment:
Q  180 gtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttc 278  Q
    ||||||||| |||| ||||| |||||||||||| ||| || |||||||||| ||| ||||||||||  | || ||| |  ||||||||||| ||||||||    
T  22586122 gtggttgtaaaattatactactgtccttttcctacgctctttagtggataagcattcaatgccttcttagtcttctaaaatagtcgttgctccaggcttc 22586023  T
Q  279 tattccttct 288  Q
    ||||||||||    
T  22586022 tattccttct 22586013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 20237636 - 20237560
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaa 113  Q
    |||||||||||| |||||||||||||||||| | |||| | |||||| ||||| |||| |||||||||||| |||||    
T  20237636 atcaccaatgatttgttgcttgatttggttaatatcctaggagggaataatttgaaattcattccttgtatggagaa 20237560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 26055791 - 26055715
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaa 113  Q
    |||||||||||||| |||||||||||||||| |||||| | | |||| ||||| ||| ||||||||||||| |||||    
T  26055791 atcaccaatgatctattgcttgatttggttaatgtcctaggacggaaaaatttgaaaaccattccttgtatggagaa 26055715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 17814846 - 17814917
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| ||||||||||||||  | ||| |||||||||||||||||| |||||    
T  17814846 aatcaccaatgatcttttgcctgatatggttattgtcctctgaaggatcaatttcaaatccattccatgtat 17814917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Complemental strand, 22586260 - 22586187
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgt 105  Q
    |||||||||||||||||||||||||||||||| ||| ||| || | |||||  ||||| |||| ||||||||||    
T  22586260 atcaaatcaccaatgatctgttgcttgatttgtttaatgttctaggagggagtaatttgaaattcattccttgt 22586187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 288
Target Start/End: Complemental strand, 27276267 - 27276156
Alignment:
Q  180 gtggttgtacaattgtactat-gtccttttcctgcgccctct--agtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggct 276  Q
    ||||||||||||||||||||| |||||||  ||| ||  |||  ||||||||| ||| |||||||||| |||||||||||  || | |||| |||| |||    
T  27276267 gtggttgtacaattgtactattgtcctttctctgtgcattcttcagtggataagcattcaatgccttctaattcctctgaaataattgttgtttcacgct 27276168  T
Q  277 tctattccttct 288  Q
    ||||||||||||    
T  27276167 tctattccttct 27276156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 24021592 - 24021643
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaa 83  Q
    |||||||||||||||||||| ||||||||||||||| |||||| | ||||||    
T  24021592 atcaaatcaccaatgatctgatgcttgatttggttaatgtcctaggagggaa 24021643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 286
Target Start/End: Complemental strand, 20237459 - 20237397
Alignment:
Q  224 ggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    |||||| |||| ||||||||| |||||||||||  |||||||||||  |||||||||||||||    
T  20237459 ggataagcatcaaatgccttctaattcctctgaaatagtcgttgctcaaggcttctattcctt 20237397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 12353054 - 12352989
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||| ||||||   ||||| ||||||||||||||||||    
T  12353054 aatcaccaatgatcttttgcctgatatggttactgtcctatgagggatcaatttcaaatccattcc 12352989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 21099963 - 21099899
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattc 100  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| |||||||||||||||||    
T  21099963 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattc 21099899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 25741001 - 25741065
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattc 100  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| |||||||||||||||||    
T  25741001 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattc 25741065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 6512687 - 6512616
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| | || |||||||||||||   | ||| |||||||||||||||||| |||||    
T  6512687 aatcaccaatgatcttttgcctaatatggttattgtcctttgaaggatcaatttcaaatccattccatgtat 6512616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 32160644 - 32160710
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcct 102  Q
    ||||||||||||||| |||| |||||||||| |||||||   | ||| ||| |||||||||||||||    
T  32160644 aatcaccaatgatcttttgcctgatttggttgttgtcctatgaaggatcaagttcaaatccattcct 32160710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 33022546 - 33022612
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcct 102  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| |||||||    
T  33022546 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatgcattcct 33022612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 34637442 - 34637500
Alignment:
Q  41 ccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccatt 99  Q
    ||||||||||||||||||||||||||| |||| | | |||||| | ||| |||||||||    
T  34637442 ccaatgatctgttgcttgatttggttaatgtcttaggagggaatagtttaaaatccatt 34637500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 89681 - 89616
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| ||||||    
T  89681 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaattcattcc 89616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 6499117 - 6499182
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| || | |||| |||||||||||||   | ||| ||||||||||||||||||    
T  6499117 aatcaccaatgatctttttcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 6499182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 7745952 - 7745887
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||| ||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  7745952 aatcatcaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 7745887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 13736391 - 13736326
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||| ||||||||| |||| |||| |||||||||||||  || ||| ||||||||||| ||||||    
T  13736391 aatcatcaatgatcttttgcctgatatggttattgtcctataaaggatcaatttcaaatgcattcc 13736326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 21203905 - 21203840
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||| ||   | ||| ||||||||||||||||||    
T  21203905 aatcaccaatgatcttttgcctgatatggttattgttctatgaaggatcaatttcaaatccattcc 21203840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 21910434 - 21910499
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||| ||   | ||| ||||||||||||||||||    
T  21910434 aatcaccaatgatcttttgcctgatatggttattgttctatgaaggatcaatttcaaatccattcc 21910499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Complemental strand, 21199262 - 21199198
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattc 100  Q
    ||||||||||||||| || | |||| |||||||||||||   | ||| |||||||||||||||||    
T  21199262 aatcaccaatgatctttttcctgatatggttattgtcctatgaaggatcaatttcaaatccattc 21199198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 23880945 - 23881009
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattc 100  Q
    ||||||||||||||| |||| | || |||||||||||||   | ||| |||||||||||||||||    
T  23880945 aatcaccaatgatcttttgccttatatggttattgtcctatgaaggatcaatttcaaatccattc 23881009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 25097084 - 25097048
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtc 72  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  25097084 aatcaccaatgatcttttgcctgatttggttattgtc 25097048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 25155054 - 25155018
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtc 72  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  25155054 aatcaccaatgatcttttgcctgatttggttattgtc 25155018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 288
Target Start/End: Original strand, 34637577 - 34637645
Alignment:
Q  220 tagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||||||| |||||||||||||  ||||||||| |  ||||||| |||  ||| |||||||||||||    
T  34637577 tagtggataagcatccaatgccttttaattcctctaaaatagtcgtcgctctaggattctattccttct 34637645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 6e-74; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 21846023 - 21846275
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||  |||| |||||||| | ||||    
T  21846023 aatcaccaatgatctgttgcttgatttggttattgtcctaggagggaacaatttcaaattcattccttgtatagagaataaccaacgtagtcaaaactgt 21846122  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | |||||||||| |||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||| |||||  |  ||||||||  ||||     
T  21846123 tatcttgtactactgcagacatgaggagtggagtaatggaggtagtggttgtacaattgtactatgtccttttcttgcgcttttaagtggatatgcatca 21846222  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||| ||||||| |||  |||||||||||  ||||||| |||||||||    
T  21846223 aatgccttctaattcctttgaaatagtcgttgctctaggcttccattccttct 21846275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 32 - 288
Target Start/End: Original strand, 20568007 - 20568264
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||||||||||||||||||||||| ||||||||||||||||   | |||||||||| ||||| ||||||||||||||||| ||||| ||||||||||     
T  20568007 atcaaatcaccaatgatctgttgctttatttggttattgtcctaagaaggaacaattttaaatcaattccttgtatagagaattaccaacgtagtcacaa 20568106  T
Q  132 ctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataaa 230  Q
    |||||||||||||||||||||||||  |  |   |||||||| |||| |||||||||||||||||||| |||||||||||   || || ||| ||||||     
T  20568107 ctgttgtcttgtactattgcagacacaaaaaacagagtagtggaggtagtggttgtacaattgtactattgtccttttccattgctctttagcggataag 20568206  T
Q  231 catccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||||||||||| ||||||| | |  ||| ||||||| ||||||||||||||||||    
T  20568207 catccaatgccttctaattcctataaaatagccgttgctccaggcttctattccttct 20568264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 80 - 288
Target Start/End: Complemental strand, 24440912 - 24440705
Alignment:
Q  80 ggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtc 179  Q
    ||||||||||||||| |||||| |  |||||||    |||||| ||||||||||||  |||||||||||||||||||||| ||||||||||||| ||||     
T  24440912 ggaacaatttcaaattcattccctaaatagagagtcgccagcgcagtcacagctgtaatcttgtactattgcagacatgaagagtggagtagtggaggta 24440813  T
Q  180 gtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttct 279  Q
    |||||||||||||||||||||||||||||  ||||| ||  |||||||||||||||||||||||| |||||||||||  |||  |||||| |||||||||    
T  24440812 gtggttgtacaattgtactatgtcctttt-atgcgctcttcagtggataaacatccaatgccttctaattcctctgaaatagcagttgctccaggcttct 24440714  T
Q  280 attccttct 288  Q
    |||||||||    
T  24440713 attccttct 24440705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 24157715 - 24157960
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||| ||||||||||||| ||||||||||||||||||| | || |||||||||||||| ||||||||| ||||||||  ||||||||||||||| ||      
T  24157715 aatcatcaatgatctgttgtttgatttggttattgtcctaggagagaacaatttcaaattcattccttgaatagagaataaccagcgtagtcacaactaa 24157814  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtcc--ttttcctgcgccctctagtggataaacat 233  Q
    |||||||||||| ||||||||||||||||||||||         |||||||| |||||||||||| |||  ||||||| ||| ||  ||||||||| |||    
T  24157815 tgtcttgtactactgcagacatgaggagtggagta---------gtggttgtgcaattgtactatatccttttttcctacgctcttcagtggataagcat 24157905  T
Q  234 ccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||| |||| ||||||||| |  ||||||||||| |||||||| |||||||||    
T  24157906 ccaatgtcttctaattcctctaaaatagtcgttgctccaggcttccattccttct 24157960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 36 - 288
Target Start/End: Complemental strand, 10896661 - 10896403
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||| ||||||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||||||| ||||| ||||||||||  |||    
T  10896661 aatcaccaatgatatgttgcttgatttggttattgtcctaggatggaacaatttcaaattcattccttttatagagaattaccaacgtagtcacaattgt 10896562  T
Q  136 tgtct-----tgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataa 229  Q
    |||||     ||||||||||||||||  |  |  | ||||||| || | |||||||||||||||||||| ||||||||||   ||| ||   | | ||||    
T  10896561 tgtcttgtattgtactattgcagacacaaataacgaagtagtggagatagtggttgtacaattgtactattgtccttttctaacgctcttcggcgaataa 10896462  T
Q  230 acatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
     |||||||||||||| ||||| |||||  ||| ||||||| |||| |||||||| ||||    
T  10896461 gcatccaatgccttctaattcttctgaaatagccgttgctccaggattctattctttct 10896403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 38 - 288
Target Start/End: Original strand, 22383357 - 22383599
Alignment:
Q  38 tcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttg 137  Q
    |||||||||||||||||||||||||||| ||| ||||   | |||||||||||||||||||||| ||| | |||||  |||||  |||   |||||||      
T  22383357 tcaccaatgatctgttgcttgatttggtaattatcctaagatggaacaatttcaaatccattccatgtttggagaacaaccagtataggtgcagctgtat 22383456  T
Q  138 tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataaacatcca 236  Q
    ||||||||||||||| |||||| ||||||||||         |||||||||||| | ||||| |||||||||  ||||| || |||||||||| ||||||    
T  22383457 tcttgtactattgcacacatgaagagtggagta---------gtggttgtacaaatatactattgtcctttttatgcgctctttagtggataagcatcca 22383547  T
Q  237 atgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||||| ||||||||| |  ||| |||||||   |||||| |||||||||    
T  22383548 atgccttctaattcctctaaaatagccgttgctcacggcttccattccttct 22383599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 180 - 288
Target Start/End: Complemental strand, 21911154 - 21911046
Alignment:
Q  180 gtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttct 279  Q
    |||||||||||||||||||||||||||||||||| | || |||||||||| |||| ||||||||| |||| |||| |  | ||||||||| |||||||||    
T  21911154 gtggttgtacaattgtactatgtccttttcctgcactctttagtggataagcatcaaatgccttctaatttctctaaaatcgtcgttgctccaggcttct 21911055  T
Q  280 attccttct 288  Q
    |||||||||    
T  21911054 attccttct 21911046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 180 - 288
Target Start/End: Original strand, 25918663 - 25918772
Alignment:
Q  180 gtggttgtacaattgtactat-gtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttc 278  Q
    ||||||||||||||||||||| |||||| | |||||| || |||||||||| |||||||||||||| |||||||||||| ||| | ||||| ||| ||||    
T  25918663 gtggttgtacaattgtactattgtccttctactgcgctctttagtggataagcatccaatgccttctaattcctctgatgtagacattgctccagacttc 25918762  T
Q  279 tattccttct 288  Q
    ||||||||||    
T  25918763 tattccttct 25918772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 15670843 - 15670744
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaat-accagcgtagtcacagctgt 135  Q
    ||||||||||||||||||||||||||||||| |||| | | |||||| ||||| ||||||||||||||| | ||||| | |||||||||| |||||||||    
T  15670843 atcaccaatgatctgttgcttgatttggttaatgtcttaggagggaataatttgaaatccattccttgtttggagaattaaccagcgtagacacagctgt 15670744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 280
Target Start/End: Complemental strand, 18431167 - 18430918
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||| |||||| ||||||||||||||||||   |  || ||||||||||||||||||  |||| ||  |||||| |  ||| ||||     
T  18431167 atcaaatcaccaatgatttgttgcctgatttggttattgtcctatgaatgatcaatttcaaatccattccaagtatggaagaataccggtataggcacaa 18431068  T
Q  132 ctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaatt-gtacta-tgtccttttcctgcgccctctagtggata 228  Q
    |||||| ||||||||||| |||||||  |  |   |||||||| |||||||||||||||| || |||||| |||| ||||||  ||   || |  | |||    
T  18431067 ctgttgttcttgtactatagcagacacaa--atcagagtagtggaggtcgtggttgtacacttcgtactattgtcgttttccaacgttttccaaagaata 18430970  T
Q  229 aacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttcta 280  Q
    | ||| |||||||||||||||| | ||| |||| |||||||||| |||||||    
T  18430969 agcattcaatgccttcaaattcttttgaattagccgttgcttcatgcttcta 18430918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 25918530 - 25918598
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgt 105  Q
    |||||||||||| |||||||||||||||||| |||||| | |||||| ||||| ||||||||| |||||    
T  25918530 atcaccaatgatatgttgcttgatttggttaatgtcctaggagggaataatttgaaatccatttcttgt 25918598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 19320631 - 19320560
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||| ||||||||| |||||||||||||||| |||||| | |||||| ||||| |||| ||||||||||||    
T  19320631 aatcatcaatgatctattgcttgatttggttaatgtcctaggagggaataatttgaaattcattccttgtat 19320560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 152
Target Start/End: Original strand, 18702611 - 18702732
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||| ||||||| |||||  |||||| ||||||||| |   | ||| ||||||||||||||||||  |||| ||| ||||| || |||| ||||     
T  18702611 atcaaatcatcaatgatttgttgtctgatttagttattgtcttatgaaggagcaatttcaaatccattccaagtatggaggaatacaagtgtaggcacaa 18702710  T
Q  132 ctgttg-tcttgtactattgca 152  Q
    |||||| |||||||||||||||    
T  18702711 ctgttgttcttgtactattgca 18702732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 22272005 - 22272074
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||||||| |||| ||||||||||||||||||   | ||| ||||||||||| ||||||    
T  22272005 atcaaatcaccaatgatcttttgcctgatttggttattgtcctatgaaggatcaatttcaaattcattcc 22272074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 288
Target Start/End: Original strand, 24844153 - 24844262
Alignment:
Q  180 gtggttgtacaattgtactat-gtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttc 278  Q
    ||||||||||||||||||||| ||||||||||   || ||| |  | |||  |||||||||||||| || ||||||||  ||||||||||| ||||||||    
T  24844153 gtggttgtacaattgtactattgtccttttccaaggctctccaaagaataggcatccaatgccttccaactcctctgaaatagtcgttgctccaggcttc 24844252  T
Q  279 tattccttct 288  Q
    ||||| ||||    
T  24844253 tattctttct 24844262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 33706049 - 33705983
Alignment:
Q  222 gtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||||| ||||||| |||||| |||| ||||||  ||||||||||||||| ||||||||| ||||    
T  33706049 gtggataagcatccaaagccttctaatttctctgaaatagtcgttgcttcagtcttctattcattct 33705983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 13964202 - 13964137
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||| ||||| |||| |||| ||||| |||||||| || ||| ||||||||||||||||||    
T  13964202 aatcaccaacgatcttttgcctgatatggttcttgtcctctaaaggatcaatttcaaatccattcc 13964137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 288
Target Start/End: Complemental strand, 15668635 - 15668526
Alignment:
Q  180 gtggttgtacaattgtactat-gtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttc 278  Q
    |||| |||||||||||||||| ||||| || || ||  ||  ||||||||| |||||||||||||  ||||| |||||  ||| |||||||||| ||||     
T  15668635 gtgggtgtacaattgtactattgtcctatttcttcggtcttcagtggataagcatccaatgccttttaattcatctgaaatagccgttgcttcaagctta 15668536  T
Q  279 tattccttct 288  Q
    ||||||||||    
T  15668535 tattccttct 15668526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 21537474 - 21537409
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  21537474 aatcaccaatgatcttttgcctgatatggttattgtcctgtgaaggatcaatttcaaatccattcc 21537409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 22188326 - 22188261
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  22188326 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 22188261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 23184528 - 23184463
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  23184528 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 23184463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 23595791 - 23595726
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  23595791 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 23595726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 24850890 - 24850825
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||| | ||||||||| |||| ||||||||  || ||| ||||||||||||||||||    
T  24850890 aatcaccaatgatattttgcttgatatggtgattgtcctttaaaggatcaatttcaaatccattcc 24850825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 26619328 - 26619259
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||||||| || | ||||||| ||||||||||   | ||| ||||||||||||||||||    
T  26619328 atcaaatcaccaatgatctttttcctgatttgattattgtcctatgaaggatcaatttcaaatccattcc 26619259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 19114956 - 19115023
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcct-cgaagggaacaatttcaaatccatt 99  Q
    ||||||||||||||||||| |||| | |||||||||||||||| |||| ||| ||||||||||| ||||    
T  19114956 atcaaatcaccaatgatcttttgcctaatttggttattgtcctacgaa-ggatcaatttcaaattcatt 19115023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 44881040 - 44881080
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtc 72  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  44881040 atcaaatcaccaatgatcttttgcctgatttggttattgtc 44881080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 22258077 - 22258148
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| |||||||||||||   | | | ||||||||||||||||||| ||||    
T  22258077 aatcaccaatgatcttttgcctgatatggttattgtcctatgaagaatcaatttcaaatccattcctagtat 22258148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 23234883 - 23234946
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccatt 99  Q
    |||||||||| |||| |||| |||| ||||||||||||||  | ||| ||||||||||||||||    
T  23234883 aatcaccaataatcttttgcctgatatggttattgtcctctgaaggatcaatttcaaatccatt 23234946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 25037483 - 25037412
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| || | |||| |||||||||| |||  | ||| |||||||||||||||||| |||||    
T  25037483 aatcaccaatgatctttttcctgatatggttattgtactcttaaggatcaatttcaaatccattccatgtat 25037412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 25829010 - 25829081
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| || |||||||||||  | ||| |||||| ||||||||||| |||||    
T  25829010 aatcaccaatgatcttttgcctgatatgattattgtcctctgaaggatcaattttaaatccattccatgtat 25829081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 6574349 - 6574284
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| ||||||    
T  6574349 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatgcattcc 6574284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 9015592 - 9015527
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| ||||  ||||||||||||   | ||| ||||||||||||||||||    
T  9015592 aatcaccaatgatcttttgcatgatagggttattgtcctatgaaggatcaatttcaaatccattcc 9015527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 22317469 - 22317534
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| || | |||| |||||||||||||   | ||| ||||||||||||||||||    
T  22317469 aatcaccaatgatctttttcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 22317534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 24376977 - 24377042
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| || | |||| |||||||||||||   | ||| ||||||||||||||||||    
T  24376977 aatcaccaatgatctttttcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 24377042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 25189274 - 25189339
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||| | |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  25189274 aatcaccaatgatattttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 25189339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 28711922 - 28711857
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| | |||||||||||   | ||| ||||||||||||||||||    
T  28711922 aatcaccaatgatcttttgcctgatatagttattgtcctatgaaggatcaatttcaaatccattcc 28711857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 272
Target Start/End: Complemental strand, 23595595 - 23595555
Alignment:
Q  232 atccaatgccttcaaattcctctgatttagtcgttgcttca 272  Q
    ||||||||||||||||||| | ||| |||||||||||||||    
T  23595595 atccaatgccttcaaattcatttgaattagtcgttgcttca 23595555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 36 - 269
Target Start/End: Complemental strand, 10636 - 10403
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||||||||||||||||||||||||||| | | ||||||||||| ||||| ||||||||| ||||||||  |||||||||| | || ||||    
T  10636 aatcaccaatgatctgttgcttgatttggttattgtcataggagggaacaattccaaattcattccttgaatagagaataaccagcgtagccgcaactgt 10537  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | |||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||  |  |||||||||||||||    
T  10536 tatcttgtactactgcagacatgaggagtggagtagtggaggtagtggttgtacaattgtactatatccttttcctgcgcttttcagtggataaacatcc 10437  T
Q  236 aatgccttcaaattcctctgatttagtcgttgct 269  Q
    ||||||||| |||| ||||||  |||||||||||    
T  10436 aatgccttctaatttctctgaaatagtcgttgct 10403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 4e-69; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 13027653 - 13027905
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||||| ||||||||||||||||||||||| | |||||| |||||||| | ||||||||| ||||||||  ||  ||||||||||||||||    
T  13027653 aatcaccaatgatctattgcttgatttggttattgtcctaggagggaaaaatttcaatttcattccttgaatagagaataacatgcgtagtcacagctgt 13027752  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | |||||||||| || ||||||| |||||||||||||| |||| |||| |||||||||||| |||||| ||||||||||| ||  ||||||||| |||||    
T  13027753 tatcttgtactactgtagacatggggagtggagtagtggaggtagtggctgtacaattgtaatatgtcattttcctgcgctcttcagtggataagcatcc 13027852  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||| |||||||||||  ||| ||||||| |||||||| |||||||||    
T  13027853 aatgccttctaattcctctgaaatagccgttgctccaggcttccattccttct 13027905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 36 - 288
Target Start/End: Complemental strand, 20571236 - 20570985
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||| ||||||||| ||||||||  |||||||||| ||||  |||    
T  20571236 aatcaccaatgatttgttgcttgatttggttattgtccttggagggaacaatttcaaattcattccttgaatagagaataaccagcgtagacacaattgt 20571137  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | ||||| |||||| ||||||||||||||| ||||||| | || ||||||||||||||||||||||||||||| ||| || ||  ||||||||| ||||     
T  20571136 tatcttgcactattacagacatgaggagtgaagtagtgga-gtagtggttgtacaattgtactatgtcctttttctgtgctcttcagtggataagcatca 20571038  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||| |||||||||||  ||||||||||| ||| ||||||||||||||    
T  20571037 aatgccttctaattcctctgaaatagtcgttgctccagacttctattccttct 20570985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 36 - 244
Target Start/End: Complemental strand, 19889231 - 19889023
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||| ||||||||||||||||||||||| | | ||||||||||||||||| |||||||||   ||||||  | | ||||||||||| ||||    
T  19889231 aatcaccaatgatatgttgcttgatttggttattgtcttaggagggaacaatttcaaattcattccttgagaagagaataatcggcgtagtcacaactgt 19889132  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | |||||||||| || |||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  19889131 tatcttgtactaatggagacatgaggagtggagtagtggaggtagtggttgtacaatcgtactatgtccttttcctgcgctctccagtggataaacatcc 19889032  T
Q  236 aatgccttc 244  Q
    |||||||||    
T  19889031 aatgccttc 19889023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 40 - 286
Target Start/End: Complemental strand, 14357364 - 14357119
Alignment:
Q  40 accaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttgtc 139  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||| |||  |||||||  |||||||||| |||| ||||| ||    
T  14357364 accaatgatctgttgcttgatttggttattgtcctaggagggaacaatttcaaattcattcattgactagagaataaccagcgtagacacatctgttatc 14357265  T
Q  140 ttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatg 239  Q
    |||| ||| | ||||||||||||||| ||||||| | || |||||||||||| ||||| || |||||||||||||| || |||||||||| |||||||||    
T  14357264 ttgttctactacagacatgaggagtgaagtagtgga-gtagtggttgtacaaatgtaccatatccttttcctgcgctctttagtggataaccatccaatg 14357166  T
Q  240 ccttcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    ||||| |||||||||||  ||| | ||||| ||||||||||||||||    
T  14357165 ccttctaattcctctgaaatagacattgctccaggcttctattcctt 14357119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 36 - 288
Target Start/End: Complemental strand, 16324753 - 16324502
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||||||||||||||||||||||| || ||   ||||||||||||||||| ||||||||| ||||||||  || |||||||||| || |||    
T  16324753 aatcaccaatgatctgttgcttgatttggttatagttctatgagggaacaatttcaaattcattccttgaatagagaataacaagcgtagtcaaagttgt 16324654  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | |||||||||| || |||||||||||||| ||||||| || | |||||||||| |||||||| ||||| |||||||||| ||  | ||||||| ||| |    
T  16324653 tatcttgtactactgtagacatgaggagtgaagtagtggagatagtggttgtacgattgtactgtgtcc-tttcctgcgctcttcaatggataagcatac 16324555  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||| |||||||||||  ||||||||| |||||||||| | |||||||    
T  16324554 aatgccttctaattcctctgaaatagtcgttgtttcaggcttcaaatccttct 16324502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 10661405 - 10661155
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||||||||||||||||||||||||||||| |||||||| |   | |||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  10661405 atcaaatcaccaatgatctgttgcttgatttgcttattgtcatgtgaaggaacaatttcaaatccattccatgtatagaggaataccagcgtagtcacag 10661306  T
Q  132 ctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataa 229  Q
    |||||| |||||||||||||||||||  |  |   |||||||| || | |||||||||||||||||||| |||||||||||  |   ||| |    ||||    
T  10661305 ctgttgttcttgtactattgcagacacaa--aacagagtagtggagatagtggttgtacaattgtactattgtccttttccaacattctccaaataataa 10661208  T
Q  230 acatccaatgccttc-aaattcctctgatttagtcgttgcttcaggcttctat 281  Q
     ||| |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  10661207 gcattcaatgccttcaaaaatcctctgatttagtcgttgcttcaggcttctat 10661155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 10875550 - 10875300
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||||||||||||||||||||||||||||| |||||||| |   | |||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  10875550 atcaaatcaccaatgatctgttgcttgatttgcttattgtcatgtgaaggaacaatttcaaatccattccatgtatagaggaataccagcgtagtcacag 10875451  T
Q  132 ctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataa 229  Q
    |||||| |||||||||||||||||||  |  |   |||||||| || | |||||||||||||||||||| |||||||||||  |   ||| |    ||||    
T  10875450 ctgttgttcttgtactattgcagacacaa--aacagagtagtggagatagtggttgtacaattgtactattgtccttttccaacattctccaaataataa 10875353  T
Q  230 acatccaatgccttc-aaattcctctgatttagtcgttgcttcaggcttctat 281  Q
     ||| |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  10875352 gcattcaatgccttcaaaaatcctctgatttagtcgttgcttcaggcttctat 10875300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 18773931 - 18774174
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||| ||||| |||||||||||||||| || | ||||||||||||||||| ||||||||| ||||||||  |||||||||| ||||  |||    
T  18773931 aatcaccaatgatttgttgtttgatttggttattgtactaggagggaacaatttcaaattcattccttgaatagagaataaccagcgtagacacaattgt 18774030  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | |||||||||| ||||||||||| ||||||||||         ||||||||||||||||| ||||| |||||||||||| ||  ||||||||| ||||     
T  18774031 tatcttgtactactgcagacatgaagagtggagta---------gtggttgtacaattgtattatgttcttttcctgcgctcttaagtggataagcatct 18774121  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||| ||||||||  |  |||| ||||||  |||| ||||||||||||    
T  18774122 aatgccttctaattcctcctaaatagttgttgctctaggcatctattccttct 18774174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 37 - 286
Target Start/End: Original strand, 2651686 - 2651923
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgtt 136  Q
    |||||||||||||||||| ||||| ||||||||||||  | |||||| ||||| |||| |||||||||| | |||||  |||||||||| ||||  | |     
T  2651686 atcaccaatgatctgttgattgatctggttattgtccgaggagggaataatttgaaattcattccttgtttggagaacaaccagcgtagacacaattata 2651785  T
Q  137 gtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcca 236  Q
    |    ||||||||||||||||||| ||||||||||||         ||||||||||||||||||||||||||||| ||| ||  ||||||||| ||| ||    
T  2651786 gca--gtactattgcagacatgag-agtggagtagtg---------gttgtacaattgtactatgtccttttcctacgctcttcagtggataagcattca 2651873  T
Q  237 atgccttcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    |||||||| |||||||||||  |||||||| || || |||||||||||||    
T  2651874 atgccttctaattcctctgaaatagtcgttactccaagcttctattcctt 2651923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 38 - 288
Target Start/End: Complemental strand, 14902684 - 14902445
Alignment:
Q  38 tcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttg 137  Q
    |||| |||||| |||||||| |||||||||||||| |   ||||||||||||||||| |||||||| | | |||||  |||||  ||| || || ||| |    
T  14902684 tcactaatgatttgttgcttaatttggttattgtcttaagagggaacaatttcaaattcattccttatttggagaacaaccagtttaggcatagttgtag 14902585  T
Q  138 tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaa 237  Q
     |||||||||||||||| |||| |||||||||||||         ||||||||||||||||||||| |||||  |||| || ||||||| || ||| ||     
T  14902584 -cttgtactattgcagatatgaagagtggagtagtg---------gttgtacaattgtactatgtcattttca-gcgctctttagtggagaagcattcac 14902496  T
Q  238 tgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||| ||||||||| |  ||||||||||| || |||||||||||||||    
T  14902495 tgccttctaattcctctaaaatagtcgttgctccaagcttctattccttct 14902445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 147
Target Start/End: Original strand, 11901061 - 11901177
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||||||||||||||||||||| ||||||||||||||||||   ||| | ||||||||||||||||||  |||| ||| || ||||| |||| ||||     
T  11901061 atcaaatcaccaatgatctgttgcctgatttggttattgtcctatgaggtatcaatttcaaatccattccaagtatggaggaaaaccagtgtaggcacaa 11901160  T
Q  132 ctgttg-tcttgtacta 147  Q
    |||||| ||||||||||    
T  11901161 ctgttgttcttgtacta 11901177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 288
Target Start/End: Original strand, 10249738 - 10249941
Alignment:
Q  85 aatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtgg 183  Q
    |||||||| ||||||||  |||||||| ||||||||||||||||||  ||||| |||||||||||||||||||  |  |   |||||||| ||   ||||    
T  10249738 aatttcaattccattccaagtatagaggaataccagcgtagtcacaattgttgttcttgtactattgcagacagaa--aacagagtagtggagaaggtgg 10249835  T
Q  184 ttgtacaattgtacta-tgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctatt 282  Q
    |||||||||||||||| |||||||||||   |  ||  |  |||||| ||||||||| |||||||||||||| | ||||| ||||||  || ||||||||    
T  10249836 ttgtacaattgtactattgtccttttccaatgttcttcaagggataagcatccaatgacttcaaattcctcttaattagttgttgctctagacttctatt 10249935  T
Q  283 ccttct 288  Q
    ||||||    
T  10249936 ccttct 10249941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 18473897 - 18474003
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaat-accagcgtagtcaca 130  Q
    |||||||||||||||||||||| ||||||||||| | ||||||   |||||| ||||| |||| |||||||||| ||||||| | ||| |||||| ||||    
T  18473897 atcaaatcaccaatgatctgttacttgatttggtcaatgtcctatgagggaataatttgaaatacattccttgtttagagaattaaccggcgtagacaca 18473996  T
Q  131 gctgttg 137  Q
    |||||||    
T  18473997 gctgttg 18474003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 288
Target Start/End: Original strand, 20577161 - 20577411
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaat-accagcgtagtcacagctgt 135  Q
    |||||||||||| | |||||||||||||||| ||| || | |||||| ||||| |||||||||| |||| | ||||||| |||||||| | ||||| ||     
T  20577161 atcaccaatgatatattgcttgatttggttaatgttctaggagggaataatttgaaatccattcattgtttggagaaataaccagcgtggacacagttg- 20577259  T
Q  136 tgtcttgtactat-tgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgt-ccttttcctgcgccctctagtggataaacat 233  Q
    || | | |||||| |||| ||| || ||||||||||||| | || |||||||| |||||||||||| | || ||| | || | ||  | |||||||  ||    
T  20577260 tgacat-tactatgtgcatacaaga-gagtggagtagtgga-gtagtggttgtgcaattgtactatttcccatttaccgcactcttcattggataagaat 20577356  T
Q  234 ccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||||| |||| ||||||  ||| | |||||||||||||||||| |||||    
T  20577357 ccaatgccttctaatttctctgaaatagccattgcttcaggcttctatttcttct 20577411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 13890704 - 13890769
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    |||||||||||||||||||||||||||||||||||| ||   | ||||||||||||||| ||||||    
T  13890704 aatcaccaatgatctgttgcttgatttggttattgttctatgaaggaacaatttcaaattcattcc 13890769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 41115008 - 41114939
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||||||| |||| ||||||||||||||||||   | ||| ||||||||||||||||||    
T  41115008 atcaaatcaccaatgatcttttgcctgatttggttattgtcctatgaaggatcaatttcaaatccattcc 41114939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 8685681 - 8685614
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccatt 99  Q
    ||||||||||||||||||| |||| ||||||||||||||||||   | |||  |||||||||||||||    
T  8685681 atcaaatcaccaatgatcttttgcctgatttggttattgtcctatgaaggattaatttcaaatccatt 8685614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 19666248 - 19666319
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| ||||||||||||||  | | | |||||||||||||||||| |||||    
T  19666248 aatcaccaatgatcttttgcctgatatggttattgtcctctgaagaatcaatttcaaatccattccatgtat 19666319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 286
Target Start/End: Original strand, 18394550 - 18394659
Alignment:
Q  180 gtggttgtacaattgtactat--gtccttttcctgcgc-cctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggct 276  Q
    |||||||||||||||||||||  |||||||  |||||| |||  ||||||||| | || ||||||||  |||||||||||  | ||||||||| ||| ||    
T  18394550 gtggttgtacaattgtactatttgtcctttctctgcgctccttcagtggataagcctcaaatgccttataattcctctgaaatggtcgttgctccagact 18394649  T
Q  277 tctattcctt 286  Q
    ||||||||||    
T  18394650 tctattcctt 18394659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 17540268 - 17540337
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    |||||||||||||||||||  ||| ||||||||||||| ||||   | ||| ||||||||||||||||||    
T  17540268 atcaaatcaccaatgatcttatgcctgatttggttattatcctatgaaggatcaatttcaaatccattcc 17540337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 37435770 - 37435705
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  37435770 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 37435705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 56034450 - 56034515
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| ||||||||| |||||||||||||   |  || ||||||||||||||||||    
T  56034450 aatcaccaatgatcttttgcttgatatggttattgtcctatgaaagatcaatttcaaatccattcc 56034515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 14904591 - 14904520
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcct-cgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||  |||| |||| ||||||||||||| |||||| | |||||||||||||||||| |||||    
T  14904591 aatcaccaatgatcctttgcctgatatggttattgtcctacgaagg-atcaatttcaaatccattccatgtat 14904520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 12811410 - 12811339
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| || ||||||||||   |  || ||||||||||||||||||||||||    
T  12811410 aatcaccaatgatcttttgcctgatatgtttattgtcctttgaatgatcaatttcaaatccattccttgtat 12811339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 23123395 - 23123466
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| |||| |||||||||  | ||| ||||||||||| |||||| |||||    
T  23123395 aatcaccaatgatcttttgcctgatatggtaattgtcctctgaaggatcaatttcaaattcattccatgtat 23123466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 29680779 - 29680708
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| | || ||||||||||||||  | ||| |||||| ||||||||||| |||||    
T  29680779 aatcaccaatgatcttttgcctaatatggttattgtcctctgaaggatcaattttaaatccattccatgtat 29680708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 6641560 - 6641625
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | | | ||||||||||||||||||    
T  6641560 aatcaccaatgatcttttgcctgatatggttattgtcctatgaagaatcaatttcaaatccattcc 6641625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 12600634 - 12600699
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||| ||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  12600634 aatcaacaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 12600699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 14605139 - 14605074
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| || | |||| |||||||||||||   | ||| ||||||||||||||||||    
T  14605139 aatcaccaatgatctttttcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 14605074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 17247119 - 17247184
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| ||||||    
T  17247119 aatcaccaatgatcttttgcctgatatggttattgtcctttgaaggatcaatttcaaatgcattcc 17247184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 17526624 - 17526547
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaa 113  Q
    ||||| || |||| ||||||||||| |||||| |||||| | |||| | ||||| ||| ||||||||||||| |||||    
T  17526624 aatcaacattgatttgttgcttgatatggttaatgtcctaggagggtataatttgaaaaccattccttgtatggagaa 17526547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 17788283 - 17788218
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatcca 97  Q
    ||||||||||||||||||| |||| |||||| ||||||||| |   | ||| ||||||||||||||    
T  17788283 atcaaatcaccaatgatcttttgcctgattttgttattgtcgtatgaaggatcaatttcaaatcca 17788218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 37985847 - 37985782
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| | |||||||||||   | ||| ||||||||||||||||||    
T  37985847 aatcaccaatgatcttttgcctgatatagttattgtcctatgaaggatcaatttcaaatccattcc 37985782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 45833270 - 45833335
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||| ||   | ||| ||||||||||||||||||    
T  45833270 aatcaccaatgatcttttgcctgatatggttattgttctatgaaggatcaatttcaaatccattcc 45833335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 55380166 - 55380231
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| ||||||    
T  55380166 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaattcattcc 55380231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 2940450 - 2940482
Alignment:
Q  164 tggagtagtgaaggtcgtggttgtacaattgta 196  Q
    ||||||||||||||| |||||||||||||||||    
T  2940450 tggagtagtgaaggtagtggttgtacaattgta 2940482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 17812344 - 17812280
Alignment:
Q  224 ggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||| |||||||||||||| |||||||||||  ||| ||||||| ||  |||||||| |||||    
T  17812344 ggataagcatccaatgccttctaattcctctgaaatagccgttgctccaaacttctatttcttct 17812280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 59438 - 59690
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    |||||| |||||||| ||||||||||| ||||||||||| | | |||||||||||||||||||||| ||||||||||| | ||||||||||||||| |||    
T  59438 aatcactaatgatctcttgcttgatttagttattgtcctaggaaggaacaatttcaaatccattccatgtatagagaatttccagcgtagtcacagttgt 59537  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    ||||||||||||||| |||||  ||||||||| || || |||| ||||||||||| || |||||||||||||| || ||| ||  | ||||||| |||||    
T  59538 tgtcttgtactattgtagacaaaaggagtggaataatggaggtagtggttgtacacttatactatgtcctttttctacgctcttcattggataaccatcc 59637  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||| ||||||||| |  ||||||||||| |||||||| |||||||||    
T  59638 aatgccttctaattcctctaaaatagtcgttgctccaggcttccattccttct 59690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 16882168 - 16882420
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    |||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||| ||||||||| ||| | ||  ||||||||||||||| ||||    
T  16882168 aatcaccaatgatctgttgcttgatttggtcattgtcctaagagggaacaatttcaaattcattccttgaatatataataaccagcgtagtcacaactgt 16882267  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    |||||||||||| |||||||| ||||||||||||| || |||| |||||||||||||||||||||||  |||||||||||  |  ||||||||| |||||    
T  16882268 tgtcttgtactactgcagacaagaggagtggagtaatggaggtagtggttgtacaattgtactatgtttttttcctgcgctattcagtggataagcatcc 16882367  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||  |||||||||||  |||  |||| | |||||||| |||||||||    
T  16882368 aatgccttttaattcctctgaaatagctgttgttgcaggcttccattccttct 16882420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 32 - 288
Target Start/End: Complemental strand, 22766805 - 22766557
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||| |||||||||||  |||| |||||   |||    
T  22766805 atcaaatcaccaatgatctgttgcttgatttggttattgtcctatgagggaacaatttcaaaaccattccatgtatagagaataaccatcgtaggtgcag 22766706  T
Q  132 ctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataaa 230  Q
    ||||  |||||||| |||| |||||||| ||||||||||         |||||||||||||||||||| |||||||||||||||| ||  |||||||||     
T  22766705 ctgtattcttgtacaattgtagacatgaagagtggagta---------gtggttgtacaattgtactattgtccttttcctgcgctcttcagtggataag 22766615  T
Q  231 catccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||||||||||||||||||||||| |||| |||||||  ||||||| |||||||||    
T  22766614 catccaatgccttcaaattcctctgaattagccgttgctctaggcttccattccttct 22766557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 40 - 288
Target Start/End: Complemental strand, 16794557 - 16794309
Alignment:
Q  40 accaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttgtc 139  Q
    |||||| || ||||||||||||||||||||||||| | || |||||||||||||| ||||||||| ||||||||  |||| ||||| |||| || || ||    
T  16794557 accaataatatgttgcttgatttggttattgtcctaggagagaacaatttcaaattcattccttgaatagagaataaccaacgtagacacaactattttc 16794458  T
Q  140 ttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatg 239  Q
    |||||||| || | ||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||| |||||| ||  | ||||||| |||||||||    
T  16794457 ttgtactactgtaaacatgaggagttgagtaatgaagggagtggttgtacaattgtactatgtcctttttctgcgctcttcaatggataagcatccaatg 16794358  T
Q  240 ccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||| | |||||||||||  ||||| |||||||||||||| |||||||||    
T  16794357 cctcctaattcctctgaaatagtcattgcttcaggcttccattccttct 16794309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 32 - 288
Target Start/End: Original strand, 14007447 - 14007703
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||||||||| ||||||||||||||||| |   | | ||||||||||||||| ||||  ||||||||| | |  ||||| |  | ||    
T  14007447 atcaaatcaccaatgatctgttgtttgatttggttattgtcttatgaagaaacaatttcaaatcccttccaagtatagagagaaatgagcgttgaaatag 14007546  T
Q  132 ctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactat-gtccttttcctgcgccctctagtggataaa 230  Q
    ||||| | ||||||||||||||||||||  |||||||||||| || | ||||||||||||||| ||||| ||||||||||||||| || |||||||||||    
T  14007547 ctgttatgttgtactattgcagacatgaaaagtggagtagtggag-tagtggttgtacaattgcactattgtccttttcctgcgctctttagtggataaa 14007645  T
Q  231 catccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||||||||||||||||||||| | |||| | ||| | |||||||| |||||||||    
T  14007646 catccaatgccttcaaattcctctaaattagccattgttgcaggcttccattccttct 14007703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 36 - 256
Target Start/End: Complemental strand, 14077629 - 14077409
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    |||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||| |||||||| |||||  || |||||||||||||||| | ||    
T  14077629 aatcaccaatgatctgtttcttgatttggttattgtccttggagggaacaatttcaaattcattccttctataggtaattaccagcgtagtcacaaccgt 14077530  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    |||||||||||||||||||||  | ||   |||||  | || | ||||||||||| |||||||||||||||||| ||||| ||  ||||||||| |||||    
T  14077529 tgtcttgtactattgcagacacaaagaacagagtacgggagatagtggttgtacagttgtactatgtccttttcttgcgctcttcagtggataagcatcc 14077430  T
Q  236 aatgccttcaaattcctctga 256  Q
    |||| |||| |||||||||||    
T  14077429 aatgtcttctaattcctctga 14077409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 36 - 215
Target Start/End: Original strand, 27374644 - 27374823
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||||| | |||||||||||||||||||||   || |||||||||||||| ||||||||| ||| ||||  ||||||||||||||| ||||    
T  27374644 aatcaccaatgatctatagcttgatttggttattgtcctaagagagaacaatttcaaattcattccttgaatatagaataaccagcgtagtcacaactgt 27374743  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgc 215  Q
    |||||||||||| ||||  ||||| ||||| |||| ||||||| |||||||||||||||||||||||||||||| |||||    
T  27374744 tgtcttgtactactgcaaccatgaagagtgaagtaatgaaggttgtggttgtacaattgtactatgtccttttcatgcgc 27374823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 40 - 288
Target Start/End: Complemental strand, 8729263 - 8729022
Alignment:
Q  40 accaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttgtc 139  Q
    ||||||||||| ||||||||||||||||||||| |   |  |||||||||||||| ||||||  | ||||||| | ||||||||||||||| ||||| ||    
T  8729263 accaatgatctattgcttgatttggttattgtcatatgaaagaacaatttcaaattcattccaagaatagagagaaaccagcgtagtcacaactgttatc 8729164  T
Q  140 ttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcc-tgcgccctctagtggataaacatccaat 238  Q
    ||||||||||| |||||||| |||||||||||||        | ||||||||||||||||||||||||| | ||||| ||  ||||||||| ||||||||    
T  8729163 ttgtactattgtagacatgaagagtggagtagtg--------gtttgtacaattgtactatgtcctttttcatgcgctcttcagtggataagcatccaat 8729072  T
Q  239 gccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||| ||||||||| |  ||||||||||| |||||||| |||||||||    
T  8729071 gccttctaattcctctaaaatagtcgttgctccaggcttccattccttct 8729022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 40 - 288
Target Start/End: Complemental strand, 9081150 - 9080909
Alignment:
Q  40 accaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttgtc 139  Q
    ||||||||||| ||||||||||||||||||||| |   |  |||||||||||||| ||||||  | ||||||| | ||||||||||||||| ||||| ||    
T  9081150 accaatgatctattgcttgatttggttattgtcatatgaaagaacaatttcaaattcattccaagaatagagagaaaccagcgtagtcacaactgttatc 9081051  T
Q  140 ttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcc-tgcgccctctagtggataaacatccaat 238  Q
    ||||||||||| |||||||| |||||||||||||        | ||||||||||||||||||||||||| | ||||| ||  ||||||||| ||||||||    
T  9081050 ttgtactattgtagacatgaagagtggagtagtg--------gtttgtacaattgtactatgtcctttttcatgcgctcttcagtggataagcatccaat 9080959  T
Q  239 gccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||| ||||||||| |  ||||||||||| |||||||| |||||||||    
T  9080958 gccttctaattcctctaaaatagtcgttgctccaggcttccattccttct 9080909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 10851688 - 10851940
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    |||||| |||||| ||||| |  |||||||||||||||| | ||||||||| ||||||||||||||||| |||||||| |||||||||||| ||||||||    
T  10851688 aatcacaaatgatttgttgatgtatttggttattgtcctaggagggaacaaattcaaatccattccttgcatagagaattaccagcgtagttacagctgt 10851787  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    |||||||||||||||||||||  |  |   |||||||| || | |||||||||||||||||||||||||||||| || || ||  |||| |||| |||||    
T  10851788 tgtcttgtactattgcagacacaaaaaacagagtagtggagatggtggttgtacaattgtactatgtccttttcttgtgctcttcagtgaataagcatcc 10851887  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||| ||| || |||| |||  ||| |||| || || |||| ||||||||||    
T  10851888 aatgctttctaactcctttgaaatagccgttactccaagcttttattccttct 10851940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 32 - 279
Target Start/End: Original strand, 6253296 - 6253545
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||||||||||||||||||||||||||||||||||||||||   | ||||||||||||||| ||||||  | |||||| |||||||||||||||||||    
T  6253296 atcaaatcaccaatgatctgttgcttgatttggttattgtcctatgaaggaacaatttcaaattcattccaagaatagaggaataccagcgtagtcacag 6253395  T
Q  132 ctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataa 229  Q
    || ||| |||||||||||||||||||  |  | | ||||| || |||| ||||| |||||||||||||| |||||||||||  ||  ||  |  | ||||    
T  6253396 ctattgttcttgtactattgcagaca-caaaaatagagtaatggaggtagtggtagtacaattgtactattgtccttttccaacgttcttcaaagaataa 6253494  T
Q  230 acatccaatgcc-ttcaaattcctctgatttagtcgttgcttcaggcttct 279  Q
     ||||||||||| || |||||||||||| |||| ||||||| |||||||||    
T  6253495 gcatccaatgcctttaaaattcctctgaattagccgttgctccaggcttct 6253545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 39 - 288
Target Start/End: Original strand, 20418115 - 20418363
Alignment:
Q  39 caccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttgt 138  Q
    |||||||||||| ||||||||||||||||||||||| | || ||| | |||||||| |||| ||||||| |||||   ||||| ||| ||||| |||| |    
T  20418115 caccaatgatcttttgcttgatttggttattgtcctaggagagaaaattttcaaattcattgcttgtatcgagaatacccagcttagacacagttgttat 20418214  T
Q  139 cttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaat 238  Q
    ||||||||||||||||||||  |||||||||| || |  | |||||| | ||||||||||||||| ||||| ||||| ||  || ||||||  |||||||    
T  20418215 cttgtactattgcagacatggagagtggagtaatgga-ttagtggttttccaattgtactatgtcattttcttgcgctcttcagaggataagtatccaat 20418313  T
Q  239 gccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||| |||||||||||  ||||||||||| ||| |||| ||| |||||    
T  20418314 gccttctaattcctctgaaatagtcgttgctccagacttccatttcttct 20418363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 32 - 288
Target Start/End: Original strand, 17697486 - 17697741
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||| |||||||||||||||||||||||||||||| ||||   ||||||| ||||||||| ||||||||||||||| || ||||||  ||||||||     
T  17697486 atcaaattaccaatgatctgttgcttgatttggttattttcctaagagggaaccatttcaaattcattccttgtatagataattaccagtatagtcacaa 17697585  T
Q  132 ctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcg-ccctctagtggataa 229  Q
     |||||||||| | |||||||||||  |  |   |||||||  || | |||||||||||||||||||| |||| |||| ||| |  | |||| |||||||    
T  17697586 ttgttgtcttgaaatattgcagacacaa--aacagagtagtagagatagtggttgtacaattgtactattgtcgtttttctgtgttcttcta-tggataa 17697682  T
Q  230 acatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
     |||||||||||||||||||||||||| ||||   ||||| ||||||||||||||||||    
T  17697683 gcatccaatgccttcaaattcctctgaattagctattgctccaggcttctattccttct 17697741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 36 - 215
Target Start/End: Original strand, 16879896 - 16880074
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    |||||||||||||||||| ||||||||||| ||||||||   |||||| |||||||||| ||||||||| |||  |||  ||||  ||||||| | ||||    
T  16879896 aatcaccaatgatctgttacttgatttggtcattgtcctaagagggaataatttcaaattcattccttgaatatggaataaccaaagtagtcataactgt 16879995  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgc 215  Q
    |||||||||||  ||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||  |||||||||||    
T  16879996 tgtcttgtactgctgcagccatgatgagtggagtagtggaggtagtggttgtacaattgtactatgt-tttttcctgcgc 16880074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 288
Target Start/End: Complemental strand, 19198159 - 19197904
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||| | |||||||||||||||||| || |   | ||||||||||| ||||||||||  | ||||||| | |||| ||| |  | ||    
T  19198159 atcaaatcaccaatgattttttgcttgatttggttattatcttgtgaaggaacaatttcgaatccattccaagaatagagaga-accaacgttgatatag 19198061  T
Q  132 ctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactat-gtccttttcctgcgccctctagtggataaa 230  Q
    ||||| |  |||||||| |||||||||  |||||||||||||||| | |||||||||||||| |||||| ||||||||  |||   ||  | |||||||     
T  19198060 ctgttattgtgtactatagcagacatggagagtggagtagtgaag-tagtggttgtacaattttactattgtccttttgttgcattcttcaatggataat 19197962  T
Q  231 catccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||| |||||||||    
T  19197961 catccaatgccttcaaattcctctgaagtagtcgttgctccaggcttccattccttct 19197904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 283
Target Start/End: Original strand, 12396943 - 12397198
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggt---tattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtca 128  Q
    ||||||||||||||||| ||||||||||||||||   |||||||||   | ||||||||||||||||||||||  | |||||| ||||||||||||||||    
T  12396943 atcaaatcaccaatgatttgttgcttgatttggtggttattgtcctatgaaggaacaatttcaaatccattccaagaatagaggaataccagcgtagtca 12397042  T
Q  129 cagctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtgga 226  Q
    || |||||| |||||||||||||||||||  |  |   || ||||| || | || ||||||||||||||||| |||||||||||  ||  ||| |  | |    
T  12397043 caactgttgctcttgtactattgcagacacaa--aacagaatagtggagatagtagttgtacaattgtactattgtccttttccaacgttctccaaagaa 12397140  T
Q  227 taaacatccaatgccttcaa-attcctctgatttagtcgttgcttcaggcttctattc 283  Q
    ||| |||| ||| ||||||| |||||||||| |||| |||||||| ||||||||||||    
T  12397141 taagcatcaaataccttcaacattcctctgaattagccgttgctttaggcttctattc 12397198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 285
Target Start/End: Original strand, 314975 - 315213
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaat-accagcgtagtcacagctgt 135  Q
    ||||||||||||||||| ||| ||||||||| |||||| | || ||| ||||| |||| |||||||||| | ||||| | |||||||||| || || |||    
T  314975 atcaccaatgatctgtttctttatttggttaatgtcctaggagagaataatttgaaattcattccttgtttggagaattaaccagcgtagacatagttgt 315074  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataaacatc 234  Q
     | ||||||||||||||||||||| ||||||||||         |||||||||||| ||||||| |||||||||| ||||| ||  ||||||||| |||     
T  315075 ag-cttgtactattgcagacatga-gagtggagta---------gtggttgtacaa-tgtactattgtccttttcatgcgctcttcagtggataagcatt 315162  T
Q  235 caatgccttcaaattcctctgatttagtcgttgcttcaggcttctattcct 285  Q
    |||||||||| |||||||||||  ||| ||||||| |||| || |||||||    
T  315163 caatgccttctaattcctctgaaatagccgttgctccaggtttttattcct 315213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 288
Target Start/End: Original strand, 14072575 - 14072822
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||| |||||||||||||||||||| ||||   ||||||||||| ||||||| ||||  | ||||||| | || ||||| |  | ||    
T  14072575 atcaaatcaccaatgatttgttgcttgatttggttattatcctatgagggaacaattacaaatcccttccaagaatagagagaaac-agcgttgatatag 14072673  T
Q  132 ctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactat-gtccttttcctgcgccctctagtggataaa 230  Q
     |||  | ||||||||| |||||||||  ||||||||| |||         ||||||||| |||||||| |||||||||| |||  ||  | |||||||     
T  14072674 ttgtgatgttgtactatagcagacatggagagtggagtggtg---------gttgtacaagtgtactattgtccttttcccgcgttcttcaatggataag 14072764  T
Q  231 catccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||||||||||||||||||||| | ||| |||||||| |||||| | |||||||||    
T  14072765 catccaatgccttcaaattcctctaaattattcgttgctccaggctcccattccttct 14072822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 13699248 - 13699336
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaat-accagcgta 124  Q
    |||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||| |||||||||| | ||||||| |||||||||    
T  13699248 atcaccaatgatctgttgcttgatttggttattgtcctaggagggaataatttgaaattcattccttgtttggagaaataaccagcgta 13699336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 288
Target Start/End: Original strand, 21317283 - 21317522
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgtt 136  Q
    ||||||||||||||||||||| |||| ||||||||||| | |||||| ||||| |||  |||||||||| | |||||  |||||| ||| |||| ||||     
T  21317283 atcaccaatgatctgttgcttaatttagttattgtccttggagggaataatttgaaactcattccttgtttggagaataaccagcatagacacaactgta 21317382  T
Q  137 gtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcca 236  Q
    |    |||||||||||  || | | ||||||||||||         |||||||||||||| |||||||||||||||||| ||  || |||||| |||| |    
T  21317383 gca--gtactattgcaaccaag-gtagtggagtagtg---------gttgtacaattgtattatgtccttttcctgcgctcttcagaggataagcatcaa 21317470  T
Q  237 atgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||||  ||||| ||| |  |||||||||||  |||||||||||||||||    
T  21317471 atgccttataattcatctaaaatagtcgttgctctaggcttctattccttct 21317522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 288
Target Start/End: Complemental strand, 16305297 - 16305188
Alignment:
Q  180 gtggttgtacaattgtactat-gtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttc 278  Q
    |||||||||||| |||| ||| ||||||||||||||| || ||||| ||||  ||||||||||||| | |||||||||  || || ||||||||||||||    
T  16305297 gtggttgtacaaatgtaatattgtccttttcctgcgctctttagtgcataagtatccaatgccttctatttcctctgaaatattcattgcttcaggcttc 16305198  T
Q  279 tattccttct 288  Q
    ||||||||||    
T  16305197 tattccttct 16305188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 278
Target Start/End: Complemental strand, 4243305 - 4243208
Alignment:
Q  180 gtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttc 278  Q
    |||||||||||||||||||||||| ||||| ||||| ||  ||||||||| ||| |||||||||  |||||||||||  ||||||||||| ||| ||||    
T  4243305 gtggttgtacaattgtactatgtcattttcttgcgctcttcagtggataagcattcaatgcctt-taattcctctgaaatagtcgttgctccagacttc 4243208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 285
Target Start/End: Original strand, 13653942 - 13654044
Alignment:
Q  183 gttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctatt 282  Q
    |||||||||||||| ||||||||||| ||| |  ||  |||||||||  ||| ||||||||| |||||||||||  |||| |||||| ||||||||||||    
T  13653942 gttgtacaattgtattatgtcctttttctgtgttcttcagtggataataatctaatgccttctaattcctctgaaatagttgttgctccaggcttctatt 13654041  T
Q  283 cct 285  Q
    |||    
T  13654042 cct 13654044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 156
Target Start/End: Original strand, 12968184 - 12968309
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||||| |||| |||||||||||||||| |   | |||  ||||||||||  |||||  |||| ||| ||||| || |||| || ||    
T  12968184 atcaaatcaccaatgatctattgcctgatttggttattgtcatgtgaaggagaaatttcaaatatattccaagtatggaggaatactagtgtaggcatag 12968283  T
Q  132 ctgttg-tcttgtactattgcagaca 156  Q
    |||||| |||||||||||||||||||    
T  12968284 ctgttgttcttgtactattgcagaca 12968309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 17762371 - 17762294
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaa 113  Q
    ||||||||||||||||||||||||||| |||| | |||| | | |||| ||||| |||| ||||||||||||||||||    
T  17762371 aatcaccaatgatctgttgcttgatttcgttaatatcctaggaaggaataatttgaaattcattccttgtatagagaa 17762294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 19063691 - 19063614
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaa 113  Q
    ||||||||||||||||||||||||||| |||| | |||| | | |||| ||||| |||| ||||||||||||||||||    
T  19063691 aatcaccaatgatctgttgcttgatttcgttaatatcctaggaaggaataatttgaaattcattccttgtatagagaa 19063614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 20724965 - 20725034
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||||||| |||| ||||||||||||||||||   | ||| ||||||||||||||||||    
T  20724965 atcaaatcaccaatgatcttttgcctgatttggttattgtcctatgaaggatcaatttcaaatccattcc 20725034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 16305430 - 16305354
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaa 113  Q
    ||||||||||| ||||||||||||||||||| |||||| | ||| || ||||| ||||||||||||||| | |||||    
T  16305430 atcaccaatgacctgttgcttgatttggttaatgtcctaggaggaaataatttgaaatccattccttgtttggagaa 16305354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 11513719 - 11513790
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    |||||||||||||||||||||||||||||||| |||||| | | |||| ||||| |||  ||||||||||||    
T  11513719 aatcaccaatgatctgttgcttgatttggttaatgtcctaggaaggaataatttgaaaatcattccttgtat 11513790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 13653808 - 13653902
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||||||||||||||||||||||||||||||||||  | ||||||  |||| |||| ||||| |||| | ||||   |||||||||| |||||    
T  13653808 atcaccaatgatctgttgcttgatttggttattgtccaaggagggaattatttgaaattcattctttgtttggagagtaaccagcgtagacacag 13653902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 11078531 - 11078583
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaattt 89  Q
    |||||||||||| |||||||||||||||||| |||||| | ||||||||||||    
T  11078531 atcaccaatgatttgttgcttgatttggttaatgtcctaggagggaacaattt 11078583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 180 - 287
Target Start/End: Original strand, 11078670 - 11078778
Alignment:
Q  180 gtggttgtacaattgtactat-gtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttc 278  Q
    |||| |||||||||||||||| |||||||| || ||| ||  ||||||||| |||| |||||||||  |||||||| |   ||| |||||| ||||||||    
T  11078670 gtggatgtacaattgtactattgtcctttttctacgctcttaagtggataagcatctaatgccttctgattcctctaaaagagtagttgctccaggcttc 11078769  T
Q  279 tattccttc 287  Q
    |||||||||    
T  11078770 tattccttc 11078778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 49643040 - 49642969
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    |||||||||| |||| |||| |||| ||||||||||||||  | ||| |||||||||||||||||| |||||    
T  49643040 aatcaccaataatcttttgcctgatatggttattgtcctctgaaggatcaatttcaaatccattccatgtat 49642969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 288
Target Start/End: Original strand, 3087590 - 3087668
Alignment:
Q  210 ctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||| || |||||||||| ||| |||||  ||| |||||||||||   ||| |||||||||||||||||||||||||    
T  3087590 ctgcgctctttagtggataagcattcaatgtattctaattcctctgaaagagttgttgcttcaggcttctattccttct 3087668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 106
Target Start/End: Complemental strand, 13780862 - 13780792
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgta 106  Q
    ||||||||||||||| |||  |||| |||||||||||||| || ||| |||||||||||| ||||| ||||    
T  13780862 aatcaccaatgatcttttgtctgatatggttattgtcctcaaaaggatcaatttcaaatctattccatgta 13780792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 22804301 - 22804236
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  22804301 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 22804236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 26417958 - 26417889
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    |||||||| ||||||||||||| | ||||||||||||||||||   |  || ||||||||||||||||||    
T  26417958 atcaaatctccaatgatctgttccctgatttggttattgtcctatgaaagatcaatttcaaatccattcc 26417889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 27851424 - 27851501
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaa 113  Q
    ||||||||||||| ||||||||||||| |||| ||| || | |||||| ||||| || | |||||||||||| |||||    
T  27851424 aatcaccaatgatttgttgcttgattttgttaatgttctaggagggaataatttgaacttcattccttgtatggagaa 27851501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 29951716 - 29951651
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  29951716 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 29951651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 30000870 - 30000805
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  30000870 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 30000805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 17668287 - 17668358
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| |||||||||||||  || ||| |||||||||||  ||||| |||||    
T  17668287 aatcaccaatgatcttttgcctgatatggttattgtcctttaaaggatcaatttcaaatagattccatgtat 17668358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 31303267 - 31303330
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccatt 99  Q
    ||||||||||||||| |||| |||| ||||||||| ||||  | ||| ||||||||||||||||    
T  31303267 aatcaccaatgatcttttgcctgatatggttattgccctctgaaggatcaatttcaaatccatt 31303330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 15647631 - 15647669
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcct 74  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  15647631 aatcaccaatgatctgttgcatgatttggttaatgtcct 15647669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 45861850 - 45861784
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcct 102  Q
    ||||||||||||||| |||| |||||||||| |||||||   | ||| ||| |||||||||||||||    
T  45861850 aatcaccaatgatcttttgcctgatttggttgttgtcctatgaaggatcaagttcaaatccattcct 45861784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 47405699 - 47405633
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcct 102  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| |||||||    
T  47405699 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatgcattcct 47405633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 12389150 - 12389085
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||| ||||| |||| |||||||||||||||||    | ||| ||||||||||||||||||    
T  12389150 aatcaccaacgatcttttgcctgatttggttattgtccaatgaaggatcaatttcaaatccattcc 12389085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 16812094 - 16812159
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| ||||| |||||||   | ||| ||||||||||||||||||    
T  16812094 aatcaccaatgatcttttgcctgatatggttgttgtcctatgaaggatcaatttcaaatccattcc 16812159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 18121892 - 18121827
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| ||||||    
T  18121892 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaattcattcc 18121827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 18143022 - 18142957
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| ||||||    
T  18143022 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaattcattcc 18142957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 18459422 - 18459345
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaa 113  Q
    ||||||||||||| ||||||||||||| |||| |||| | | | |||| ||||| |||| | |||||| |||||||||    
T  18459422 aatcaccaatgatatgttgcttgatttagttaatgtcttaggaaggaataatttaaaatgctttccttatatagagaa 18459345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 19249689 - 19249624
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||||| |||||||||||   | ||| ||||||| ||||||||||    
T  19249689 aatcaccaatgatcttttgcctgattttgttattgtcctatgaaggatcaatttcgaatccattcc 19249624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 20627709 - 20627644
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| ||||||    
T  20627709 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatgcattcc 20627644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 20646035 - 20646100
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||| ||||||||||||||    
T  20646035 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaaattcaaatccattcc 20646100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 25398533 - 25398468
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| |||||| |||||||||||    
T  25398533 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaattttaaatccattcc 25398468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 28581987 - 28582052
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| || | |||||||||||||   | ||| ||||||||||||||||||    
T  28581987 aatcaccaatgatcttttgcctgctatggttattgtcctatgaaggatcaatttcaaatccattcc 28582052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 49553767 - 49553702
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| ||||||    
T  49553767 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaattcattcc 49553702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 1464163 - 1464231
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttg 104  Q
    ||||| || |||| |||||||||||||||||| |||||| | |||||| ||||| |||  |||||||||    
T  1464163 aatcaacattgatttgttgcttgatttggttaatgtcctaggagggaataatttgaaaatcattccttg 1464231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 4243419 - 4243383
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtc 72  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  4243419 aatcaccaatgatttgttgcttgatttgtttattgtc 4243383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 7832913 - 7832841
Alignment:
Q  40 accaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagaga 112  Q
    |||||||||||||||||| ||||||||| ||||||   |||||| ||||| ||||  ||||  ||||||||||    
T  7832913 accaatgatctgttgctttatttggttagtgtcctacgagggaataatttgaaatttattcgctgtatagaga 7832841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 12410084 - 12410004
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaata 116  Q
    ||||| || |||| ||||||||||| |||||| |||||  | | |||| ||||| ||| ||||||||||||| ||||||||    
T  12410084 aatcaacattgatttgttgcttgatctggttaatgtccaaggaaggaataatttgaaaaccattccttgtatggagaaata 12410004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 12968385 - 12968433
Alignment:
Q  232 atccaatgccttcaaattcctctgatttagtcgttgcttcaggcttcta 280  Q
    ||||||||||||||||||| | ||| ||||||||| ||||| |||||||    
T  12968385 atccaatgccttcaaattcttttgaattagtcgttacttcatgcttcta 12968433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 23538447 - 23538379
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattc 100  Q
    |||||||||||| |||||| ||   ||||||||||||||||||   | ||| |||||||||||||||||    
T  23538447 atcaaatcaccattgatcttttctctgatttggttattgtcctatgaaggatcaatttcaaatccattc 23538379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1026 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold1026
Description:

Target: scaffold1026; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 2847 - 3099
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||  ||||||||  || ||||||||| || | ||    
T  2847 aatcaccaatgatctgttgcttgatttggttattgtcctaagagggaacaatttcaaattcattcctttaatagagaataactagcgtagtcgcaaccgt 2946  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    |||||||||||||||||| ||||| ||||| |||| || |||| ||||||||||||||| |||||||||||||| || || || |||||||||| |||||    
T  2947 tgtcttgtactattgcagccatgaagagtgaagtaatggaggttgtggttgtacaattgcactatgtccttttcttgagctctttagtggataagcatcc 3046  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||| ||| ||||||||| |   ||||||||||||| ||||| || ||||||    
T  3047 aatgcattctaattcctctaaaacagtcgttgcttcaagcttccataccttct 3099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 36 - 288
Target Start/End: Original strand, 19949 - 20200
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||| | |||||||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||||  ||||||||||  | | ||||    
T  19949 aatcaccaatgatttattgcttgatttggttattgtcctatgagggaacaatttcaaattcattccttgaatagagaataaccagcgtagatataactgt 20048  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | |||||||||| |||| || ||||||||||||||||| | |  |||||||||||||||||||||||||||||||||||| ||  | ||||||| |||||    
T  20049 tatcttgtactactgcaaacttgaggagtggagtagtgga-gaagtggttgtacaattgtactatgtccttttcctgcgctcttcaatggataagcatcc 20147  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||||| ||| ||||| |||||  |||||||||||  ||||||| |||||||||    
T  20148 aatgctttctaattcttctgaaatagtcgttgctctaggcttccattccttct 20200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 36 - 286
Target Start/End: Complemental strand, 1110 - 860
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||||||| |||||||||||||| |||||||||| | ||||||||||||||||| ||||| ||| ||||||||  ||||||||||||||| || |    
T  1110 aatcaccaatgatttgttgcttgatttgattattgtcctaggagggaacaatttcaaattcattcattgaatagagaataaccagcgtagtcacaactat 1011  T
Q  136 tgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatcc 235  Q
    | || ||||||| || ||||||||  |||||||||||| |||| |||||||||||||||||||||| ||||||| || || ||  ||||||||| |||||    
T  1010 tatcctgtactactgtagacatgataagtggagtagtggaggtagtggttgtacaattgtactatgcccttttcatgtgctcttcagtggataagcatcc 911  T
Q  236 aatgccttcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    |||| |||| || ||||||||  |||| |||||| || ||||| |||||||    
T  910 aatgtcttctaaatcctctgaaatagttgttgctccaagcttccattcctt 860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 99; Significance: 7e-49; HSPs: 2)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 42 - 288
Target Start/End: Complemental strand, 4490 - 4245
Alignment:
Q  42 caatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttgtctt 141  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||||  || |||||||  | | || || ||||    
T  4490 caatgatctgttgcttgatttggttattgtcctatgagggaacaatttcaaattcattccttgaatagagaataactagcgtagatataactattatctt 4391  T
Q  142 gtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgcc 241  Q
    |||||| |||| |||||||||||||||||||| | |  |||||||||||||||||| |||| |||||||||||| ||  | ||||||| ||||||||||     
T  4390 gtactactgcaaacatgaggagtggagtagtgga-gaagtggttgtacaattgtacaatgttcttttcctgcgctcttcaatggataagcatccaatgct 4292  T
Q  242 ttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||| ||||| |||||  ||||||||| |  ||||||| |||||||||    
T  4291 ttctaattcttctgaaatagtcgttgttctaggcttccattccttct 4245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 42 - 288
Target Start/End: Complemental strand, 11773 - 11528
Alignment:
Q  42 caatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttgtctt 141  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||||  || |||||||  | | || || ||||    
T  11773 caatgatctgttgcttgatttggttattgtcctatgagggaacaatttcaaattcattccttgaatagagaataactagcgtagatataactattatctt 11674  T
Q  142 gtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgcc 241  Q
    |||||| |||| |||||||||||||||||||| | |  |||||||||||||||||| |||| |||||||||||| ||  | ||||||| ||||||||||     
T  11673 gtactactgcaaacatgaggagtggagtagtgga-gaagtggttgtacaattgtacaatgttcttttcctgcgctcttcaatggataagcatccaatgct 11575  T
Q  242 ttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    ||| ||||| |||||  ||||||||| |  ||||||| |||||||||    
T  11574 ttctaattcttctgaaatagtcgttgttctaggcttccattccttct 11528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 281
Target Start/End: Complemental strand, 32017 - 31766
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaat-accagcgtagtcaca 130  Q
    ||||||||||||||||||| |||||||||||||||||||| ||   | |||||||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  32017 atcaaatcaccaatgatctattgcttgatttggttattgtactatcaaggaacaatttcaaatccattccatgtatagaggaataaccagcgtagtcaca 31918  T
Q  131 gctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggata 228  Q
     |||||| |||||||||||||||||||  |  |   |||||||| |||| ||||||||||| |||||||| |||||||||||  ||  ||| |  | |||    
T  31917 actgttgttcttgtactattgcagaca--aaaaacagagtagtggaggtagtggttgtacacttgtactattgtccttttccaacgttctccaaagaata 31820  T
Q  229 aacatccaatgcctt-caaattcctctgatttagtcgttgcttcaggcttctat 281  Q
    | |||||||||| || ||||||||||||| |||| |||||| ||||||||||||    
T  31819 agcatccaatgctttccaaattcctctgaattagccgttgcatcaggcttctat 31766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 82; Significance: 1e-38; HSPs: 3)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 32 - 210
Target Start/End: Complemental strand, 544 - 366
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||||||| |||||||| |||| ||||||||||||||||||   | |||||||||||||||||||||||||||| ||| ||||||||||||||||||     
T  544 atcaaatcactaatgatctattgcctgatttggttattgtcctttgaaggaacaatttcaaatccattccttgtatggaggaataccagcgtagtcacaa 445  T
Q  132 ctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtact-atgtccttttcc 210  Q
    |||||| |||||||||||||||||||  |  |   |||||||| |||| ||||||||||| ||||||| ||||||||||||    
T  444 ctgttgttcttgtactattgcagacacaa--aacagagtagtggaggtagtggttgtacacttgtactaatgtccttttcc 366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 222 - 288
Target Start/End: Complemental strand, 3350 - 3284
Alignment:
Q  222 gtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||||| ||||||||||||||||||||||||||  ||||| ||||| ||| ||| ||||||||||    
T  3350 gtggataagcatccaatgccttcaaattcctctgaaatagtcattgctccagacttttattccttct 3284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 350 - 310
Alignment:
Q  226 ataaacatccaatgccttcaaattcctctgatttagtcgtt 266  Q
    |||| |||||||||||||||||||||||| |||||| ||||    
T  350 ataagcatccaatgccttcaaattcctcttatttagccgtt 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 283
Target Start/End: Original strand, 29671 - 29924
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcct-cgaagggaacaatttcaaatccattcc--ttgtatagagaaataccagcgtagtca 128  Q
    ||||||||||||||||||||||  |||||||| |||||||||| |||| ||||||||||||||||||||||   | ||||||| ||||||||||||||||    
T  29671 atcaaatcaccaatgatctgtttattgatttgattattgtcctacgaa-ggaacaatttcaaatccattccaagtatatagaggaataccagcgtagtca 29769  T
Q  129 cagctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtgga 226  Q
    ||||||||| |||||||||||||||||||| |  |    | ||||| || | |||||||| || |||||||| ||||||||||   ||  ||| |  | |    
T  29770 cagctgttgttcttgtactattgcagacataa--aacaaaatagtggagatagtggttgtccacttgtactattgtccttttcgaacgttctccaaagaa 29867  T
Q  227 taaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattc 283  Q
    ||| |||||||||||||| ||||| ||||| |||||||||||| |||||||||||||    
T  29868 taagcatccaatgccttccaattcatctgaattagtcgttgctccaggcttctattc 29924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 76; Significance: 4e-35; HSPs: 3)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 32 - 288
Target Start/End: Original strand, 2536 - 2792
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    |||||||||||||||||||||||||| ||||||||||||||||   | |||||||||||||||||||||   |||||||| |||||||||||| ||||||    
T  2536 atcaaatcaccaatgatctgttgctttatttggttattgtcctaagaaggaacaatttcaaatccattcagagtatagaggaataccagcgtattcacag 2635  T
Q  132 ctgtt-gtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataa 229  Q
     ||||  |||||||||||||||||||  |  | | |||||||  || | |||||||||||| |||| || |||||||||||  ||| |||    | ||||    
T  2636 ttgttattcttgtactattgcagacacaa--aatagagtagtagagatagtggttgtacaactgtaatattgtccttttccaccgctctcgcaagtataa 2733  T
Q  230 acatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
      ||||||||||||| ||||||||| |  ||||||||||| ||||||| ||||| ||||    
T  2734 gtatccaatgccttccaattcctctaaaatagtcgttgctccaggcttttattctttct 2792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 180 - 288
Target Start/End: Complemental strand, 3489 - 3381
Alignment:
Q  180 gtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttct 279  Q
    ||||||||||||||||||||||| |||||||||  |||| |||||||||| |||| ||||||||| |||||||||||  ||| | |||||  ||||||||    
T  3489 gtggttgtacaattgtactatgttcttttcctgttccctttagtggataagcatcgaatgccttctaattcctctgaaatagccattgctctaggcttct 3390  T
Q  280 attccttct 288  Q
    |||||||||    
T  3389 attccttct 3381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 3630 - 3562
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgt 105  Q
    |||||||| |||||||||||||||||||||| |||||| | || ||| || || |||||||||||||||    
T  3630 atcaccaaggatctgttgcttgatttggttaatgtcctaggagagaataacttgaaatccattccttgt 3562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 268669 - 268784
Alignment:
Q  42 caatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttg-tct 140  Q
    |||||||||||||||||||||||||||||||||   | |||||||||||||||||||||| ||||||||| |||||||||||||||||| || ||| |||    
T  268669 caatgatctgttgcttgatttggttattgtcctatgaaggaacaatttcaaatccattccatgtatagaggaataccagcgtagtcacaactattgttct 268768  T
Q  141 tgtactattgcagaca 156  Q
    ||||||||||||||||    
T  268769 tgtactattgcagaca 268784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 84277 - 84338
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatcca 97  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||    
T  84277 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatcca 84338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 35 - 288
Target Start/End: Original strand, 582 - 836
Alignment:
Q  35 aaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctg 134  Q
    |||||||||||||||||||||||||| |||||||||||||   ||||||||| |||||||||| |||||||||||||| ||| || ||||||||    ||    
T  582 aaatcaccaatgatctgttgcttgatgtggttattgtcctaatagggaacaagttcaaatccactccttgtatagagagataacaacgtagtcattattg 681  T
Q  135 ttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcctgcgccctctagtggataaaca 232  Q
    ||| |||||||||||||||||||  |    | |||||||| || |  ||||||||||||||||||| ||||||||||   ||| ||  |  | |||| ||    
T  682 ttgttcttgtactattgcagacacaa--catagagtagtggagataatggttgtacaattgtactattgtccttttcgaacgctcttcaaagaataagca 779  T
Q  233 tccaatgccttcaaattcctctgatttagtcgttgcttcaggcttc-tattccttct 288  Q
    |||||||||||  |||| ||||||  ||||||||||| |||||||| ||||||||||    
T  780 tccaatgcctttcaatttctctgaaatagtcgttgctccaggcttcttattccttct 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 288
Target Start/End: Complemental strand, 416096 - 416028
Alignment:
Q  220 tagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||| ||||| | |||||||||||| ||||| | |||  ||||||||||| ||||||||||||||||||    
T  416096 tagtagataaccgtccaatgccttctaattcatttgaaatagtcgttgctccaggcttctattccttct 416028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 416253 - 416201
Alignment:
Q  53 tgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgt 105  Q
    ||||||||||||||| |||| | | |||||||||||| |||| ||||||||||    
T  416253 tgcttgatttggttaatgtcttaggagggaacaatttgaaattcattccttgt 416201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 7219 - 7347
Alignment:
Q  42 caatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgttgtctt 141  Q
    |||||||||||||||||||||||||||| ||||   ||||||||||||||||| ||||||||| ||||||||  ||||||||||  | || |||| ||||    
T  7219 caatgatctgttgcttgatttggttattatcctatgagggaacaatttcaaattcattccttgaatagagaataaccagcgtagatatagttgttatctt 7318  T
Q  142 gtactattgcagacatgaggagtggagta 170  Q
    |||||| |||| |||||| ||||| ||||    
T  7319 gtactactgcaaacatgacgagtgcagta 7347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 288
Target Start/End: Original strand, 112085 - 112336
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaata-ccagcgtagtcaca 130  Q
    |||||||||||||| || ||||||| || ||||||| ||| || | | |||| ||||| |||| |||| || |||  ||||| || |||| |||| ||||    
T  112085 atcaaatcaccaattatttgttgctggacttggttaatgttctaggatggaataatttgaaatacatttctagtacggagaattaaccagagtagacaca 112184  T
Q  131 gctgttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaa 230  Q
    | ||| | |||||||||||| ||||||||| ||||||| |||| || | ||||||||| |||||||||||||||||||||||||| ||  |||||   |     
T  112185 gttgtag-cttgtactattgtagacatgag-agtggaggagtggag-tagtggttgtaaaattgtactatgtccttttcctgcgctcttcagtgg---ag 112278  T
Q  231 catccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    |||||||||||||| |||||||| ||  ||  |||||||| |||||| ||||||||||    
T  112279 catccaatgccttctaattcctcagaaatatccgttgctttaggcttttattccttct 112336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 59; Significance: 5e-25; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 88286 - 88396
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctgt 135  Q
    ||||||||| ||| ||||| ||||||||| |||||||||   || |||||||||||||||||||| ||||||||| || ||||||||||||||||  |||    
T  88286 aatcaccaaggatttgttgattgatttggatattgtcctaagagagaacaatttcaaatccattcattgtatagataattaccagcgtagtcacaattgt 88385  T
Q  136 tgtcttgtact 146  Q
    |||||||||||    
T  88386 tgtcttgtact 88396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 244515 - 244451
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatcc 96  Q
    ||||||||||||||||||| |||| ||||||||||||||||||   | ||| |||||||||||||    
T  244515 atcaaatcaccaatgatcttttgcctgatttggttattgtcctatgaaggatcaatttcaaatcc 244451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 377788 - 377723
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  377788 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 377723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 210
Target Start/End: Original strand, 144784 - 144962
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||||| |||| ||||||||||||||||||   | |||  |||||||||| |||||| | |||  || |||||||| ||||||||||    
T  144784 atcaaatcaccaatgatcttttgcctgatttggttattgtcctatgaaggattaatttcaaattcattccatatatgaaggaataccagtgtagtcacag 144883  T
Q  132 ctgttg-tcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtacta-tgtccttttcc 210  Q
     ||||| |||||||||||||||||||  |  |   |||||||| |||| |||| ||||||||||||||| |||||||||||    
T  144884 atgttgttcttgtactattgcagacacaa--aacagagtagtggaggtagtggatgtacaattgtactattgtccttttcc 144962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 161 - 288
Target Start/End: Original strand, 4275 - 4402
Alignment:
Q  161 gagtggagtagtgaaggtcgtggttgtacaattgtactat-gtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgattt 259  Q
    ||||||||||||| || | ||||||||||||||||||||| ||| ||||||||||  ||  ||||||||| |||| ||||||||| |||||||||||  |    
T  4275 gagtggagtagtggag-tagtggttgtacaattgtactattgtcattttcctgcgttcttcagtggataagcatcaaatgccttctaattcctctgaaat 4373  T
Q  260 agtcgttgcttcaggcttctattccttct 288  Q
    |||||||||| ||||||| ||||||||||    
T  4374 agtcgttgctccaggcttttattccttct 4402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 4152 - 4220
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgt 105  Q
    ||||||||||| ||||||||| ||||| |||  ||||| | |||||| ||| | |||||||||||||||    
T  4152 atcaccaatgacctgttgctttatttgtttaaagtcctaggagggaataatctgaaatccattccttgt 4220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 180 - 288
Target Start/End: Original strand, 31648 - 31756
Alignment:
Q  180 gtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttct 279  Q
    ||||||||||||||||||||| |||||||| ||||| ||  ||||||||| |||||||| ||||| ||||||| | |  ||||||||||| |||||||||    
T  31648 gtggttgtacaattgtactatatccttttcatgcgctcttcagtggataagcatccaattccttctaattcctttaaaatagtcgttgctccaggcttct 31747  T
Q  280 attccttct 288  Q
    |||||||||    
T  31748 attccttct 31756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 288
Target Start/End: Complemental strand, 4241 - 4000
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgt--cctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagctg 134  Q
    |||||||||||||||||||||||||||||||||||  | |   |||||| ||||| |||| |||||||||| | |||||  |||||||||| |||| |||    
T  4241 atcaccaatgatctgttgcttgatttggttattgtgtcataagagggaataatttgaaattcattccttgtttggagaacaaccagcgtagacacaactg 4142  T
Q  135 ttgtcttgtactattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatc 234  Q
    | |    ||||||||||||||||| | ||||||||||||         |||||||||||||||||||||||||| |||||| ||  |  |||||||||||    
T  4141 tagaa--gtactattgcagacatg-gtagtggagtagtg---------gttgtacaattgtactatgtcctttttctgcgctcttcaaaggataaacatc 4054  T
Q  235 caatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
     ||| ||||| ||||||| |||  ||| |||| || ||  ||||||||||||||    
T  4053 aaattccttctaattcctatgaaatagccgttcctccaaacttctattccttct 4000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 156
Target Start/End: Complemental strand, 1752 - 1628
Alignment:
Q  33 tcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacagc 132  Q
    |||||||||||||||||| |||| | ||||||||||||||||   | ||| ||||||| |||||||||| ||||| ||| || ||  | |||| || |||    
T  1752 tcaaatcaccaatgatcttttgccttatttggttattgtcctatgaaggatcaatttccaatccattccatgtatggaggaacactggtgtaggcatagc 1653  T
Q  133 tgttg-tcttgtactattgcagaca 156  Q
    ||||| |||||| ||||||||||||    
T  1652 tgttgttcttgtcctattgcagaca 1628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 284
Target Start/End: Original strand, 5400 - 5506
Alignment:
Q  180 gtggttgtacaattgtactat-gtccttttcctgcgc-cctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggctt 277  Q
    ||||||||||||||||||||| |||||||  | | || |||  | |||||||| ||||||||||||||||||||||||| |||| ||||||| |||||||    
T  5400 gtggttgtacaattgtactattgtcctttctccgagctccttcactggataaatatccaatgccttcaaattcctctgaattagccgttgctccaggctt 5499  T
Q  278 ctattcc 284  Q
    |||||||    
T  5500 ctattcc 5506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 5267 - 5306
Alignment:
Q  35 aaatcaccaatgatctgttgcttgatttggttattgtcct 74  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  5267 aaatcaccaatgatctgttgcttgatttggttaatgtcct 5306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 288
Target Start/End: Complemental strand, 9373 - 9234
Alignment:
Q  144 actattgcagacatgaggagtggagtagtgaaggtcgtggttgtacaattgtactatgtccttttcctgcgccctctagtggataaacatccaatgcctt 243  Q
    ||||||||| ||||||| ||||||| |||| || | ||||||||| |||||||||||||||||||||||||| ||  |||||   | |||||||||||||    
T  9373 actattgcatacatgag-agtggaggagtggag-tagtggttgtaaaattgtactatgtccttttcctgcgctcttcagtgg---agcatccaatgcctt 9279  T
Q  244 caaattcctctgatttagtcgttgcttcaggcttctattccttct 288  Q
    | |||||||| ||  ||  |||||||| |||||| ||||||||||    
T  9278 ctaattcctcagaaatatccgttgctttaggcttttattccttct 9234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 156
Target Start/End: Original strand, 5506 - 5631
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtagtcacag 131  Q
    ||||||||||||||||||||||||  |||||||||||||||||   | ||| ||||||||||||||||||  |||  ||| || ||| | | || ||||     
T  5506 atcaaatcaccaatgatctgttgcccgatttggttattgtcctatgaaggatcaatttcaaatccattccaagtaaggaggaacaccggtgcaggcacaa 5605  T
Q  132 ctgttg-tcttgtactattgcagaca 156  Q
    |||||| |||||||||||||||||||    
T  5606 ctgttgttcttgtactattgcagaca 5631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 269 - 337
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgt 105  Q
    |||||||||||||| |||||||||||||||| |||||| | |||||| ||||| |||||||||||||||    
T  269 atcaccaatgatctattgcttgatttggttaatgtcctaggagggaataatttgaaatccattccttgt 337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0683; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 289
Target Start/End: Original strand, 420 - 509
Alignment:
Q  200 tgtccttttcctgcgccctctagtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttctc 289  Q
    |||||||||  ||||| || ||||| ||||  || |||||||||| |||||||||||  | |||||||||  |||||| |||||||||||    
T  420 tgtcctttttatgcgctctttagtgaataagtattcaatgccttctaattcctctgaaattgtcgttgctctaggcttttattccttctc 509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 2058 - 1990
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgt 105  Q
    ||||||||||||||||||||||||||||||| |||||| | || ||| ||||| |||||||||||||||    
T  2058 atcaccaatgatctgttgcttgatttggttaatgtcctaggagcgaataatttgaaatccattccttgt 1990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 19075 - 19126
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaat 87  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  19075 aatcaccaatgatatgttgcttgatttggttattgtcctaggagggaacaat 19126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 16373 - 16286
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaatacca 119  Q
    ||||||||||| ||||||| || | ||||||||||||||||||   | ||||||||||||||| ||||||  |||||||| |||||||    
T  16373 atcaaatcaccgatgatctatttcctgatttggttattgtcctatgaaggaacaatttcaaattcattccaagtatagaggaatacca 16286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 2027 - 1934
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagagaaataccagcgtag 125  Q
    |||||||||||||||||||||||  |||||||||||| |||||   | ||| ||| ||||||||||||||  |||| ||| ||||| |||||||    
T  2027 atcaaatcaccaatgatctgttgtctgatttggttatcgtcctatgaaggatcaaattcaaatccattccaagtatggaggaatactagcgtag 1934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 40517 - 40586
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||||||| || | ||||||||||||||||||   | ||| ||||||||||||||||||    
T  40517 atcaaatcaccaatgatctttttcctgatttggttattgtcctatgaaggatcaatttcaaatccattcc 40586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 44151 - 44072
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtatagag 111  Q
    ||||||||||||||||||| || | | ||||||||||||||||   | ||| |||||||||||||||||| ||| |||||    
T  44151 atcaaatcaccaatgatctttttcctaatttggttattgtcctatgaaggatcaatttcaaatccattccatgtctagag 44072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 7808 - 7879
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||| ||||    
T  7808 aatcaccaatgatcttttgcatgatatggttattgtcctatgaaggatcaatttcaaatccattcctagtat 7879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1107 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1107
Description:

Target: scaffold1107; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 287
Target Start/End: Complemental strand, 2405 - 2339
Alignment:
Q  221 agtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattccttc 287  Q
    ||||| ||| |||||||||||||| ||||||||| |  ||||||||||||||| ||| |||||||||    
T  2405 agtgggtaagcatccaatgccttctaattcctctaaaatagtcgttgcttcagtcttatattccttc 2339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 78421 - 78527
Alignment:
Q  180 gtggttgtacaattgtactat-gtccttttcctg-cgccctctagtggataaacatccaatgccttc-aaattcctctgatttagtcgttgcttcaggct 276  Q
    ||||||||||||||||||||| ||||||||||   ||  |||||  | ||||||||||||||||||| |||||||||||| |||| ||||||  || |||    
T  78421 gtggttgtacaattgtactattgtccttttcccaacgttctctaaagaataaacatccaatgccttcaaaattcctctgaattagccgttgccccaagct 78520  T
Q  277 tctattc 283  Q
    |||||||    
T  78521 tctattc 78527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 1196 - 1265
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||||||| |||| ||||||| | ||||||||   | ||| ||||||||||||||||||    
T  1196 atcaaatcaccaatgatcttttgcatgatttgttaattgtcctatgaaggatcaatttcaaatccattcc 1265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 215 - 146
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||||||| |||| ||||||| | ||||||||   | ||| ||||||||||||||||||    
T  215 atcaaatcaccaatgatcttttgcatgatttgttaattgtcctatgaaggatcaatttcaaatccattcc 146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 9788 - 9853
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  9788 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 9853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 7587 - 7652
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  7587 aatcaccaatgatctattgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 7652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 1542 - 1607
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  1542 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 1607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 16465 - 16400
Alignment:
Q  221 agtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcaggcttctattcctt 286  Q
    ||||| ||| |||||||||||||| |||| |||| |  ||||||||||||||| ||||||||||||    
T  16465 agtgggtaagcatccaatgccttctaatttctctaaaatagtcgttgcttcagtcttctattcctt 16400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 36415 - 36346
Alignment:
Q  32 atcaaatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||||||| || | |||||| |||||||||||   | ||| ||||||||||||||||||    
T  36415 atcaaatcaccaatgatctttttcctgatttagttattgtcctatgaaggatcaatttcaaatccattcc 36346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 103453 - 103518
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| ||||||||||| ||  | ||| ||||||||||||||||||    
T  103453 aatcaccaatgatcttttgcctgatatggttattgtcgtccgaaggatcaatttcaaatccattcc 103518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 142979 - 143044
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||||||||||    
T  142979 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 143044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 8150 - 8202
Alignment:
Q  221 agtggataaacatccaatgccttcaaattcctctgatttagtcgttgcttcag 273  Q
    ||||||||| |||||||||||||| |||||||||||  || ||||||||||||    
T  8150 agtggataatcatccaatgccttctaattcctctgaaataatcgttgcttcag 8202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 14530 - 14601
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| |||||||| |||||  | | | |||||||||||||||||| |||||    
T  14530 aatcaccaatgatcttttgcctgatatggttattatcctctgaagtatcaatttcaaatccattccatgtat 14601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 18850 - 18779
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| | || |||||||||||||   | ||| |||||||||||||||||| |||||    
T  18850 aatcaccaatgatcttttgcctaatatggttattgtcctttgaaggatcaatttcaaatccattccatgtat 18779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 26204 - 26133
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| |||||| |||||    
T  26204 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaattcattccatgtat 26133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 1572 - 1643
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||||||| |||| |||| |||||||| |||||  | | | |||||||||||||||||| |||||    
T  1572 aatcaccaatgatcttttgcctgatatggttattatcctctgaagtatcaatttcaaatccattccatgtat 1643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 884 - 826
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaat 94  Q
    ||||||||||||||| |||| |||| ||||||||||||| | |  ||||||||||||||    
T  884 aatcaccaatgatcttttgcctgatatggttattgtcctaggaatgaacaatttcaaat 826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 16837 - 16875
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcct 74  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  16837 aatcaccaatgatcttttgcttgatttggttgttgtcct 16875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 18913 - 18978
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| ||||  ||||||||||||   | ||| ||||||||||||||||||    
T  18913 aatcaccaatgatcttttgcctgatacggttattgtcctatgaaggatcaatttcaaatccattcc 18978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 10337 - 10272
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| |||||||||||| |||||    
T  10337 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatcaattcc 10272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 15001 - 14936
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||| |||| |||||||||||||   | ||| |||||||||||| |||||    
T  15001 aatcaccaatgatcttttgcctgatatggttattgtcctatgaaggatcaatttcaaatcaattcc 14936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 9785 - 9850
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| || | |||| |||||||||||||   | ||| ||||||||||||||||||    
T  9785 aatcaccaatgatctttttcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 9850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 37284 - 37349
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||  |||| |||||||||||||   | ||| ||||||||||||||||||    
T  37284 aatcaccaatgatcttttgtctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 37349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 135344 - 135409
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| |||  |||| |||||||||||||   | ||| ||||||||||||||||||    
T  135344 aatcaccaatgatcttttgtctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 135409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 212239 - 212304
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    ||||||||||||||| || | |||| |||||||||||||   | ||| ||||||||||||||||||    
T  212239 aatcaccaatgatctttttcctgatatggttattgtcctatgaaggatcaatttcaaatccattcc 212304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 101
Target Start/End: Complemental strand, 1927 - 1863
Alignment:
Q  37 atcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattcc 101  Q
    |||||||||||||| |||| |||| |||||||||||||   | ||| ||||||||||| ||||||    
T  1927 atcaccaatgatcttttgcctgatatggttattgtcctaagaaggatcaatttcaaatgcattcc 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 13453 - 13517
Alignment:
Q  36 aatcaccaatgatctgttgcttgatttggttattgtcctcgaagggaacaatttcaaatccattc 100  Q
    |||||| |||||||| ||||||||| ||||||||||| |   | ||| |||||||||||||||||    
T  13453 aatcactaatgatcttttgcttgatatggttattgtcttatgaaggatcaatttcaaatccattc 13517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 32371 - 32438
Alignment:
Q  40 accaatgatctgttgcttgatttggttattgtcct-cgaagggaacaatttcaaatccattccttgtat 107  Q
    ||||||||||  |||| |||| ||||||||||||| |||| ||| |||||||||||||||||| |||||    
T  32371 accaatgatcgtttgcctgatatggttattgtcctacgaa-ggatcaatttcaaatccattccatgtat 32438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University