View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3658_low_21 (Length: 239)

Name: NF3658_low_21
Description: NF3658
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3658_low_21
NF3658_low_21
[»] chr4 (73 HSPs)
chr4 (1-207)||(56178827-56179033)
chr4 (1-221)||(52082847-52083068)
chr4 (1-207)||(48142812-48143020)
chr4 (1-221)||(52095552-52095771)
chr4 (1-217)||(29999996-30000212)
chr4 (1-221)||(5429437-5429657)
chr4 (1-221)||(37740383-37740603)
chr4 (28-221)||(52093882-52094075)
chr4 (1-207)||(5370277-5370484)
chr4 (1-176)||(26175826-26176003)
chr4 (3-176)||(12739742-12739917)
chr4 (3-176)||(12747948-12748123)
chr4 (1-217)||(34570604-34570821)
chr4 (9-221)||(29254251-29254463)
chr4 (1-153)||(9927648-9927800)
chr4 (1-221)||(54200096-54200317)
chr4 (1-172)||(12745626-12745799)
chr4 (9-221)||(5268853-5269066)
chr4 (1-206)||(13992476-13992682)
chr4 (9-221)||(36314883-36315096)
chr4 (9-221)||(36329092-36329305)
chr4 (9-221)||(8689150-8689362)
chr4 (9-221)||(16622947-16623159)
chr4 (10-221)||(25861686-25861898)
chr4 (9-221)||(3777780-3777992)
chr4 (51-221)||(54867453-54867623)
chr4 (1-135)||(36994368-36994502)
chr4 (9-221)||(16628526-16628738)
chr4 (1-115)||(5871683-5871798)
chr4 (9-221)||(6743068-6743281)
chr4 (9-207)||(10047612-10047806)
chr4 (1-115)||(13009621-13009736)
chr4 (1-114)||(24968975-24969090)
chr4 (1-112)||(52467544-52467657)
chr4 (1-88)||(47038599-47038687)
chr4 (9-172)||(5396372-5396537)
chr4 (9-221)||(31985288-31985499)
chr4 (9-221)||(38152091-38152304)
chr4 (9-221)||(5147909-5148121)
chr4 (9-114)||(5112468-5112574)
chr4 (10-102)||(3909983-3910075)
chr4 (11-221)||(5143493-5143704)
chr4 (10-139)||(31495509-31495639)
chr4 (36-110)||(45687422-45687496)
chr4 (36-113)||(37229962-37230039)
chr4 (36-113)||(46147581-46147658)
chr4 (1-107)||(5208032-5208140)
chr4 (22-110)||(21704040-21704128)
chr4 (1-103)||(6542371-6542475)
chr4 (9-112)||(23042988-23043093)
chr4 (9-143)||(42599306-42599440)
chr4 (22-82)||(48142591-48142651)
chr4 (90-207)||(35661980-35662097)
chr4 (47-113)||(36463639-36463705)
chr4 (1-85)||(6677360-6677447)
chr4 (1-105)||(37755113-37755220)
chr4 (9-103)||(24334042-24334139)
chr4 (9-126)||(39774053-39774171)
chr4 (22-103)||(6375950-6376030)
chr4 (1-69)||(31474059-31474128)
chr4 (1-103)||(51336938-51337042)
chr4 (10-102)||(39593958-39594053)
chr4 (9-103)||(3793849-3793946)
chr4 (160-221)||(27417520-27417580)
chr4 (1-44)||(4587892-4587936)
chr4 (10-139)||(5135911-5136041)
chr4 (1-44)||(36463579-36463623)
chr4 (31-139)||(5138137-5138246)
chr4 (52-110)||(21548638-21548697)
chr4 (66-113)||(31473803-31473850)
chr4 (9-105)||(37782094-37782192)
chr4 (160-198)||(41639032-41639070)
chr4 (160-196)||(28468087-28468123)
[»] chr2 (65 HSPs)
chr2 (1-221)||(2334608-2334828)
chr2 (1-221)||(5723445-5723665)
chr2 (1-221)||(36988266-36988486)
chr2 (1-221)||(45099512-45099732)
chr2 (1-221)||(4503323-4503543)
chr2 (1-221)||(36205854-36206076)
chr2 (1-207)||(39284656-39284863)
chr2 (2-207)||(6595198-6595403)
chr2 (1-205)||(29867641-29867847)
chr2 (1-172)||(38312045-38312218)
chr2 (1-221)||(36318199-36318420)
chr2 (1-155)||(17057559-17057714)
chr2 (1-155)||(17085542-17085697)
chr2 (9-221)||(34389082-34389294)
chr2 (3-221)||(4484523-4484741)
chr2 (9-219)||(33528279-33528490)
chr2 (9-221)||(23078125-23078337)
chr2 (1-115)||(11151781-11151896)
chr2 (9-177)||(36757458-36757628)
chr2 (1-115)||(42362215-42362330)
chr2 (52-221)||(2837086-2837255)
chr2 (1-115)||(11690364-11690479)
chr2 (9-221)||(21630176-21630389)
chr2 (1-96)||(723934-724030)
chr2 (9-221)||(28258831-28259043)
chr2 (9-218)||(33118366-33118576)
chr2 (9-105)||(33162649-33162745)
chr2 (1-115)||(14202597-14202712)
chr2 (9-221)||(20522453-20522666)
chr2 (9-218)||(8389805-8390015)
chr2 (9-221)||(10706906-10707118)
chr2 (1-105)||(34139961-34140066)
chr2 (1-96)||(14634016-14634112)
chr2 (1-139)||(32289411-32289550)
chr2 (9-221)||(14698662-14698875)
chr2 (3-223)||(30833101-30833321)
chr2 (9-220)||(13569560-13569773)
chr2 (36-113)||(36773414-36773491)
chr2 (9-151)||(17865436-17865578)
chr2 (1-104)||(12123774-12123879)
chr2 (40-122)||(11049393-11049474)
chr2 (9-112)||(3278231-3278336)
chr2 (9-126)||(40015156-40015273)
chr2 (9-115)||(12632912-12633022)
chr2 (1-56)||(24885583-24885639)
chr2 (46-105)||(7815523-7815580)
chr2 (9-102)||(41586322-41586417)
chr2 (9-103)||(8040295-8040392)
chr2 (36-110)||(11067160-11067234)
chr2 (9-103)||(31056274-31056371)
chr2 (9-102)||(2837799-2837895)
chr2 (9-104)||(10445238-10445333)
chr2 (9-103)||(34682102-34682199)
chr2 (9-81)||(39483164-39483237)
chr2 (14-103)||(42269605-42269697)
chr2 (10-139)||(6266537-6266667)
chr2 (1-44)||(36773496-36773540)
chr2 (9-223)||(40739065-40739277)
chr2 (183-220)||(11690248-11690285)
chr2 (9-103)||(5700321-5700417)
chr2 (186-221)||(40015315-40015350)
chr2 (51-104)||(35397783-35397837)
chr2 (136-221)||(39483235-39483320)
chr2 (36-105)||(13121628-13121697)
chr2 (183-220)||(42362100-42362137)
[»] chr1 (68 HSPs)
chr1 (1-216)||(3206749-3206964)
chr1 (1-221)||(20762429-20762649)
chr1 (5-221)||(13316513-13316729)
chr1 (1-221)||(10924980-10925201)
chr1 (1-221)||(28220416-28220637)
chr1 (1-221)||(28223611-28223832)
chr1 (1-217)||(31658999-31659216)
chr1 (1-176)||(3156667-3156843)
chr1 (1-172)||(3189137-3189308)
chr1 (1-172)||(3197954-3198125)
chr1 (1-221)||(49918106-49918328)
chr1 (9-215)||(30476647-30476853)
chr1 (1-221)||(1833279-1833500)
chr1 (1-198)||(37503744-37503942)
chr1 (1-141)||(37560059-37560200)
chr1 (1-139)||(44454998-44455138)
chr1 (9-221)||(3281938-3282150)
chr1 (9-221)||(21536224-21536436)
chr1 (9-221)||(13598631-13598844)
chr1 (9-221)||(29652044-29652257)
chr1 (1-133)||(197098-197232)
chr1 (1-122)||(15820163-15820285)
chr1 (1-113)||(13138164-13138277)
chr1 (9-122)||(23555464-23555577)
chr1 (1-115)||(3847311-3847426)
chr1 (9-207)||(4552836-4553045)
chr1 (9-221)||(37069998-37070211)
chr1 (9-221)||(13604276-13604488)
chr1 (9-96)||(834366-834453)
chr1 (1-221)||(46064675-46064896)
chr1 (1-113)||(50169400-50169513)
chr1 (10-207)||(26644565-26644763)
chr1 (3-139)||(51765234-51765370)
chr1 (1-113)||(45644545-45644658)
chr1 (9-143)||(47098556-47098691)
chr1 (9-143)||(47102570-47102705)
chr1 (1-115)||(8550977-8551092)
chr1 (9-116)||(13659535-13659642)
chr1 (9-115)||(40122397-40122503)
chr1 (1-96)||(928167-928264)
chr1 (36-113)||(50167414-50167491)
chr1 (36-113)||(777095-777172)
chr1 (36-113)||(28265793-28265869)
chr1 (9-103)||(47703704-47703801)
chr1 (9-133)||(27104143-27104267)
chr1 (9-143)||(32889669-32889804)
chr1 (10-139)||(40282222-40282353)
chr1 (9-103)||(19073159-19073256)
chr1 (9-103)||(19121049-19121146)
chr1 (9-103)||(40816585-40816682)
chr1 (8-104)||(2263176-2263273)
chr1 (11-126)||(9022655-9022770)
chr1 (9-123)||(22819662-22819775)
chr1 (22-110)||(43342468-43342556)
chr1 (10-195)||(9036208-9036393)
chr1 (44-92)||(16455532-16455580)
chr1 (10-139)||(21053803-21053934)
chr1 (9-104)||(24202536-24202633)
chr1 (52-107)||(25116465-25116520)
chr1 (60-113)||(8871310-8871363)
chr1 (9-42)||(16124347-16124380)
chr1 (1-44)||(777177-777221)
chr1 (10-139)||(9987048-9987178)
chr1 (1-44)||(28265744-28265788)
chr1 (74-112)||(11031268-11031306)
chr1 (9-98)||(8281549-8281641)
chr1 (1-100)||(44650353-44650454)
chr1 (183-219)||(16455405-16455441)
[»] chr8 (59 HSPs)
chr8 (1-221)||(17982410-17982630)
chr8 (1-221)||(34254520-34254739)
chr8 (1-221)||(44303611-44303831)
chr8 (1-219)||(43036182-43036401)
chr8 (1-221)||(31218014-31218234)
chr8 (1-221)||(12702829-12703050)
chr8 (1-221)||(1746409-1746629)
chr8 (1-217)||(34256696-34256911)
chr8 (1-172)||(42498000-42498171)
chr8 (1-221)||(15212543-15212764)
chr8 (1-221)||(30143099-30143320)
chr8 (22-221)||(19948533-19948732)
chr8 (9-221)||(33351907-33352119)
chr8 (1-221)||(4731415-4731636)
chr8 (1-172)||(19945551-19945722)
chr8 (1-175)||(27811080-27811256)
chr8 (9-153)||(4733630-4733778)
chr8 (9-221)||(5702133-5702346)
chr8 (10-221)||(23799229-23799441)
chr8 (9-207)||(7412571-7412769)
chr8 (1-115)||(6598835-6598950)
chr8 (1-115)||(6674288-6674403)
chr8 (1-105)||(3303860-3303965)
chr8 (9-175)||(4696306-4696474)
chr8 (1-115)||(41365037-41365152)
chr8 (1-113)||(5689136-5689249)
chr8 (9-122)||(10929657-10929768)
chr8 (9-96)||(10015030-10015117)
chr8 (1-114)||(1292653-1292767)
chr8 (9-167)||(4456259-4456419)
chr8 (9-221)||(3051351-3051565)
chr8 (10-96)||(4162382-4162468)
chr8 (9-113)||(18141685-18141790)
chr8 (1-87)||(1345561-1345648)
chr8 (10-139)||(2627581-2627711)
chr8 (9-176)||(19175448-19175620)
chr8 (22-105)||(29796535-29796618)
chr8 (9-221)||(4743402-4743604)
chr8 (1-95)||(18106268-18106363)
chr8 (1-75)||(41366804-41366879)
chr8 (36-105)||(40320940-40321009)
chr8 (1-110)||(8153629-8153740)
chr8 (9-113)||(3318747-3318853)
chr8 (1-103)||(9765622-9765727)
chr8 (9-122)||(28307793-28307907)
chr8 (36-113)||(30291457-30291534)
chr8 (8-114)||(5990323-5990428)
chr8 (60-124)||(1872173-1872237)
chr8 (9-143)||(19752126-19752260)
chr8 (10-195)||(3439292-3439480)
chr8 (4-105)||(38863743-38863846)
chr8 (36-110)||(32902413-32902487)
chr8 (1-113)||(11712191-11712306)
chr8 (1-105)||(41266840-41266947)
chr8 (36-110)||(7597469-7597543)
chr8 (9-44)||(7493004-7493039)
chr8 (190-219)||(19945719-19945748)
chr8 (160-197)||(43036109-43036146)
chr8 (59-103)||(33022953-33022997)
[»] chr5 (55 HSPs)
chr5 (1-221)||(25412519-25412739)
chr5 (1-221)||(13342818-13343038)
chr5 (1-221)||(36074235-36074455)
chr5 (1-207)||(30683111-30683317)
chr5 (1-221)||(13239509-13239729)
chr5 (1-221)||(30182345-30182566)
chr5 (1-221)||(13487960-13488181)
chr5 (1-221)||(42426425-42426646)
chr5 (1-221)||(32636581-32636802)
chr5 (1-207)||(533540-533747)
chr5 (1-193)||(28750845-28751039)
chr5 (1-207)||(42428620-42428827)
chr5 (1-220)||(37438904-37439111)
chr5 (1-123)||(39468739-39468862)
chr5 (9-221)||(14520461-14520673)
chr5 (1-221)||(19806163-19806362)
chr5 (9-221)||(11916625-11916838)
chr5 (1-115)||(31182836-31182951)
chr5 (1-115)||(5887606-5887721)
chr5 (2-113)||(16451946-16452057)
chr5 (1-126)||(42926745-42926871)
chr5 (1-139)||(16409321-16409460)
chr5 (1-102)||(537901-538003)
chr5 (45-221)||(16649857-16650034)
chr5 (9-153)||(11181554-11181698)
chr5 (9-221)||(12083831-12084043)
chr5 (1-139)||(26170620-26170759)
chr5 (1-139)||(26177729-26177868)
chr5 (11-105)||(3075859-3075953)
chr5 (1-139)||(9789407-9789546)
chr5 (1-139)||(18441831-18441970)
chr5 (1-115)||(8566136-8566252)
chr5 (1-96)||(33831562-33831658)
chr5 (9-221)||(9352988-9353198)
chr5 (9-221)||(36932003-36932214)
chr5 (15-102)||(42310140-42310227)
chr5 (9-143)||(17003690-17003825)
chr5 (9-207)||(15464765-15464963)
chr5 (9-143)||(24553257-24553393)
chr5 (9-133)||(31300337-31300461)
chr5 (46-110)||(9049591-9049655)
chr5 (9-103)||(10281983-10282080)
chr5 (33-195)||(10593048-10593212)
chr5 (9-104)||(28832488-28832583)
chr5 (101-175)||(535685-535760)
chr5 (51-116)||(13695945-13696010)
chr5 (10-121)||(29720228-29720340)
chr5 (10-139)||(29722370-29722500)
chr5 (1-113)||(3325778-3325892)
chr5 (10-121)||(29751352-29751464)
chr5 (9-83)||(19588976-19589051)
chr5 (1-110)||(5007419-5007529)
chr5 (160-221)||(5057588-5057648)
chr5 (160-221)||(16650973-16651033)
chr5 (160-221)||(27015071-27015131)
[»] chr6 (48 HSPs)
chr6 (1-221)||(5406389-5406609)
chr6 (1-221)||(5410714-5410934)
chr6 (1-221)||(31404864-31405085)
chr6 (1-221)||(30834727-30834948)
chr6 (1-221)||(33160544-33160765)
chr6 (1-221)||(16452520-16452740)
chr6 (1-193)||(5413583-5413775)
chr6 (1-172)||(9183221-9183393)
chr6 (9-176)||(33211384-33211552)
chr6 (66-221)||(5411489-5411644)
chr6 (66-221)||(5407164-5407319)
chr6 (9-221)||(31086126-31086340)
chr6 (9-221)||(22963930-22964142)
chr6 (9-221)||(23824251-23824463)
chr6 (1-139)||(2171721-2171860)
chr6 (51-221)||(18234357-18234527)
chr6 (1-115)||(28137598-28137713)
chr6 (9-221)||(5757132-5757344)
chr6 (11-115)||(26954486-26954590)
chr6 (1-115)||(16567069-16567184)
chr6 (51-221)||(10076844-10077014)
chr6 (9-221)||(5017149-5017362)
chr6 (9-105)||(16568916-16569012)
chr6 (9-221)||(24435625-24435837)
chr6 (129-221)||(16452759-16452851)
chr6 (9-221)||(31979743-31979961)
chr6 (9-172)||(5571945-5572109)
chr6 (1-104)||(6097623-6097728)
chr6 (1-115)||(3039093-3039220)
chr6 (9-143)||(31936806-31936941)
chr6 (18-221)||(21272642-21272846)
chr6 (10-106)||(411981-412077)
chr6 (10-102)||(3072952-3073045)
chr6 (53-155)||(23896628-23896730)
chr6 (9-103)||(21801113-21801210)
chr6 (31-138)||(27647709-27647819)
chr6 (9-113)||(22709241-22709345)
chr6 (54-110)||(4045283-4045339)
chr6 (169-221)||(5413807-5413859)
chr6 (183-221)||(9183383-9183421)
chr6 (26-115)||(30684121-30684211)
chr6 (42-102)||(30517894-30517954)
chr6 (24-115)||(20505073-20505163)
chr6 (11-115)||(99388-99494)
chr6 (183-221)||(5571917-5571955)
chr6 (10-196)||(6027038-6027224)
chr6 (9-42)||(21356268-21356301)
chr6 (183-220)||(28137793-28137830)
[»] chr3 (87 HSPs)
chr3 (1-221)||(7762021-7762243)
chr3 (1-221)||(45094921-45095142)
chr3 (1-221)||(5260514-5260734)
chr3 (1-221)||(40734255-40734476)
chr3 (1-221)||(5258335-5258555)
chr3 (1-221)||(9636317-9636539)
chr3 (1-221)||(29812820-29813041)
chr3 (1-221)||(7764209-7764445)
chr3 (1-221)||(29810625-29810846)
chr3 (1-207)||(51398585-51398792)
chr3 (1-221)||(37408216-37408436)
chr3 (1-221)||(5236646-5236868)
chr3 (9-221)||(40592424-40592637)
chr3 (1-116)||(32744617-32744732)
chr3 (9-221)||(39032198-39032409)
chr3 (9-221)||(47923546-47923759)
chr3 (9-221)||(1735946-1736159)
chr3 (2-221)||(30709439-30709651)
chr3 (9-221)||(16264580-16264792)
chr3 (9-221)||(8370132-8370344)
chr3 (9-221)||(24694808-24695021)
chr3 (9-221)||(36029324-36029537)
chr3 (9-217)||(48438447-48438655)
chr3 (9-107)||(40735254-40735352)
chr3 (1-152)||(23200327-23200479)
chr3 (1-221)||(23198128-23198348)
chr3 (9-217)||(27974599-27974807)
chr3 (9-105)||(39153560-39153656)
chr3 (9-221)||(27026937-27027149)
chr3 (1-174)||(44331360-44331523)
chr3 (1-115)||(9581146-9581261)
chr3 (1-115)||(19684079-19684194)
chr3 (1-115)||(760710-760825)
chr3 (1-115)||(22835192-22835307)
chr3 (1-114)||(53921693-53921807)
chr3 (1-96)||(29682241-29682337)
chr3 (9-221)||(37725906-37726118)
chr3 (9-113)||(32890968-32891072)
chr3 (9-116)||(16498892-16498999)
chr3 (1-113)||(9666657-9666771)
chr3 (10-150)||(21711454-21711594)
chr3 (9-174)||(27038282-27038449)
chr3 (9-221)||(33386318-33386530)
chr3 (24-115)||(26386695-26386786)
chr3 (1-221)||(23410519-23410741)
chr3 (11-105)||(5373096-5373191)
chr3 (9-221)||(8126861-8127074)
chr3 (10-221)||(40844887-40845097)
chr3 (9-176)||(35925709-35925880)
chr3 (9-143)||(6794435-6794570)
chr3 (1-148)||(23392099-23392249)
chr3 (9-221)||(27453191-27453400)
chr3 (36-115)||(29196627-29196706)
chr3 (10-103)||(800973-801067)
chr3 (14-221)||(25929038-25929246)
chr3 (9-223)||(32143554-32143767)
chr3 (36-113)||(44700718-44700795)
chr3 (10-104)||(4386736-4386831)
chr3 (9-172)||(27986147-27986311)
chr3 (40-110)||(2075300-2075369)
chr3 (9-103)||(3715760-3715857)
chr3 (9-83)||(3323471-3323546)
chr3 (98-220)||(44331735-44331857)
chr3 (9-153)||(26928310-26928454)
chr3 (10-195)||(6716290-6716476)
chr3 (9-119)||(26299219-26299329)
chr3 (58-113)||(40519446-40519501)
chr3 (14-83)||(1417271-1417341)
chr3 (10-106)||(6718563-6718660)
chr3 (9-103)||(47649801-47649898)
chr3 (44-139)||(7782375-7782470)
chr3 (9-115)||(3328106-3328212)
chr3 (10-138)||(54634971-54635101)
chr3 (10-106)||(25637308-25637404)
chr3 (9-103)||(25796011-25796108)
chr3 (51-105)||(54740019-54740073)
chr3 (56-105)||(8166705-8166754)
chr3 (60-105)||(51352378-51352423)
chr3 (1-44)||(31314379-31314423)
chr3 (22-104)||(29100408-29100493)
chr3 (36-110)||(37761710-37761784)
chr3 (9-104)||(7167480-7167578)
chr3 (160-221)||(31340610-31340671)
chr3 (160-197)||(34490700-34490737)
chr3 (183-220)||(39153742-39153779)
chr3 (160-221)||(43404302-43404362)
chr3 (160-197)||(44331892-44331929)
[»] chr7 (80 HSPs)
chr7 (1-221)||(4178532-4178752)
chr7 (1-221)||(23554797-23555017)
chr7 (1-221)||(24514951-24515171)
chr7 (1-219)||(29990814-29991032)
chr7 (1-221)||(35853670-35853892)
chr7 (1-221)||(2761492-2761713)
chr7 (1-221)||(14070023-14070244)
chr7 (1-221)||(14380051-14380272)
chr7 (1-221)||(18126401-18126622)
chr7 (1-221)||(47676326-47676547)
chr7 (9-221)||(4585918-4586130)
chr7 (1-221)||(1113413-1113635)
chr7 (1-176)||(30024922-30025099)
chr7 (2-143)||(19502013-19502154)
chr7 (1-207)||(31733159-31733359)
chr7 (1-221)||(47674133-47674354)
chr7 (10-221)||(26417070-26417284)
chr7 (1-142)||(43864080-43864222)
chr7 (1-221)||(48491335-48491557)
chr7 (1-221)||(48489187-48489409)
chr7 (9-221)||(49091920-49092134)
chr7 (1-139)||(39731215-39731354)
chr7 (1-221)||(4538730-4538962)
chr7 (9-219)||(21989139-21989349)
chr7 (9-115)||(38671421-38671527)
chr7 (11-219)||(6570352-6570561)
chr7 (1-152)||(48408629-48408780)
chr7 (9-176)||(46516005-46516171)
chr7 (1-113)||(31105583-31105696)
chr7 (1-152)||(25767148-25767296)
chr7 (138-221)||(19495728-19495811)
chr7 (9-221)||(33332103-33332316)
chr7 (1-114)||(24526087-24526201)
chr7 (9-221)||(44847779-44847991)
chr7 (9-221)||(2647350-2647563)
chr7 (1-105)||(36574705-36574811)
chr7 (1-96)||(496173-496269)
chr7 (9-221)||(2479567-2479779)
chr7 (1-110)||(4253719-4253830)
chr7 (9-115)||(25615726-25615832)
chr7 (9-115)||(41649209-41649314)
chr7 (36-113)||(41317673-41317750)
chr7 (1-115)||(31518658-31518773)
chr7 (36-113)||(12098098-12098175)
chr7 (9-133)||(2580621-2580744)
chr7 (9-143)||(20284320-20284455)
chr7 (1-113)||(23565251-23565363)
chr7 (9-143)||(9189736-9189873)
chr7 (22-112)||(23343840-23343930)
chr7 (47-113)||(36146659-36146725)
chr7 (10-106)||(43504347-43504444)
chr7 (51-221)||(79662-79833)
chr7 (116-221)||(21983581-21983686)
chr7 (9-104)||(23402784-23402879)
chr7 (24-126)||(3047500-3047603)
chr7 (9-221)||(4796322-4796534)
chr7 (9-83)||(9184965-9185040)
chr7 (102-155)||(2759071-2759124)
chr7 (36-113)||(8153194-8153271)
chr7 (2-104)||(5817040-5817143)
chr7 (36-103)||(30843472-30843539)
chr7 (9-103)||(29160036-29160133)
chr7 (9-43)||(9235414-9235448)
chr7 (1-50)||(27347745-27347795)
chr7 (129-221)||(47263995-47264086)
chr7 (160-221)||(3050494-3050554)
chr7 (1-44)||(8153276-8153320)
chr7 (1-44)||(12098049-12098093)
chr7 (9-104)||(21640041-21640138)
chr7 (9-104)||(21646239-21646336)
chr7 (59-110)||(26639149-26639200)
chr7 (51-86)||(40808482-40808517)
chr7 (59-105)||(3904879-3904924)
chr7 (160-198)||(4796250-4796288)
chr7 (10-196)||(6592531-6592717)
chr7 (10-106)||(20343776-20343873)
chr7 (10-102)||(24789724-24789817)
chr7 (1-44)||(36146598-36146643)
chr7 (160-196)||(21646497-21646533)
chr7 (11-39)||(35961050-35961078)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-221)||(434290-434510)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-221)||(20605-20826)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-217)||(114347-114580)
[»] scaffold0491 (2 HSPs)
scaffold0491 (3-221)||(11354-11572)
scaffold0491 (3-139)||(8928-9065)
[»] scaffold1519 (1 HSPs)
scaffold1519 (1-112)||(783-894)
[»] scaffold0006 (4 HSPs)
scaffold0006 (9-221)||(5916-6129)
scaffold0006 (9-221)||(132933-133145)
scaffold0006 (10-221)||(2726-2937)
scaffold0006 (9-116)||(149296-149403)
[»] scaffold0087 (2 HSPs)
scaffold0087 (9-221)||(36486-36698)
scaffold0087 (9-221)||(43615-43827)
[»] scaffold0036 (1 HSPs)
scaffold0036 (9-176)||(85914-86083)
[»] scaffold0098 (1 HSPs)
scaffold0098 (9-221)||(45429-45642)
[»] scaffold0140 (1 HSPs)
scaffold0140 (9-221)||(8071-8283)
[»] scaffold0176 (1 HSPs)
scaffold0176 (9-175)||(17482-17650)
[»] scaffold0286 (2 HSPs)
scaffold0286 (42-139)||(22183-22280)
scaffold0286 (1-34)||(11502-11535)
[»] scaffold0148 (1 HSPs)
scaffold0148 (9-103)||(10962-11059)
[»] scaffold0137 (1 HSPs)
scaffold0137 (10-196)||(6064-6250)
[»] scaffold0129 (1 HSPs)
scaffold0129 (1-70)||(19129-19199)
[»] scaffold0078 (1 HSPs)
scaffold0078 (52-122)||(23807-23877)
[»] scaffold0014 (1 HSPs)
scaffold0014 (160-221)||(80852-80912)
[»] scaffold0355 (1 HSPs)
scaffold0355 (159-195)||(3541-3577)


Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 56178827 - 56179033
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  56178827 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccttcaaccctaaagttacctcctttgatttcccaagtttctct 56178926  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  56178927 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacatttttcccagatcgtgtcacgattgatg 56179026  T
Q  201 cgtacga 207  Q
    |||||||    
T  56179027 cgtacga 56179033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 52082847 - 52083068
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52082847 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 52082946  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgat 199  Q
    |||||||||||| || |||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52082947 tctcttcaagctgtccttcaaaatttgcaaagaacacttatataggagtcttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgat 52083046  T
Q  200 gcgtacgatccaaggtacgacc 221  Q
    || ||||| |||||||| ||||    
T  52083047 gcttacgacccaaggtatgacc 52083068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 48143020 - 48142812
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48143020 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 48142921  T
Q  100 tctcttcaagctctct-ttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  48142920 tctcttctagctctctcttcaaaaactgcaaagaacacttatatagcagacttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattga 48142821  T
Q  199 tgcgtacga 207  Q
    |||||||||    
T  48142820 tgcgtacga 48142812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 52095552 - 52095771
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  52095552 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagtccctcaaccctaaagttacctcctttgatttcccaagtttctc 52095651  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgat 199  Q
    |||||||||||| || |||||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||||| | |||||||||||||||||    
T  52095652 tctcttcaagctgtccttcaaaatctacaaagaacacttatatagcagtcttcagcgtcgaaatc--gtcacgtttttcctatatcgtgtcacgattgat 52095749  T
Q  200 gcgtacgatccaaggtacgacc 221  Q
    || ||||| |||||||||||||    
T  52095750 gcttacgacccaaggtacgacc 52095771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 29999996 - 30000212
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||||    
T  29999996 ttcactcaccaaggtgtttacaatgtttccaaacccaagagaactctaatcaaagaccctaaaccctaaagttgtctcctttgatttcccaagtttctct 30000095  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||||| ||||||||||||||| |||||||||||| || |||||||||||||||||||||||| ||||||||  |||||| |||||||||||    
T  30000096 ctcttcaagctctccttcaaaatctgcaaaaaacacttatatagcaatcttcagcgtcgaaatcgtgtcacatttttccccaatcgtgccacgattgatg 30000195  T
Q  201 cgtacgatccaaggtac 217  Q
    ||||||| |||||||||    
T  30000196 cgtacgacccaaggtac 30000212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 5429657 - 5429437
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  5429657 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacttcctttgatttcccaagtttctc 5429558  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgat 199  Q
    ||||||||||||||| |||||  ||||||||||||||||||||| |||| ||||||||| ||||||||||| | |||||||| |||||| |||||||| |    
T  5429557 tctcttcaagctctccttcaaggtctgcaaagaacacttatatagcagttttcagcgtcaaaatcgtgtcatg-ttttcccacatcgtgacacgattggt 5429459  T
Q  200 gcgtacgatccaaggtacgacc 221  Q
    |||||||| |||||||||||||    
T  5429458 gcgtacgacccaaggtacgacc 5429437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 37740603 - 37740383
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  37740603 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaacttacctcctttgatttcccaagtttctct 37740504  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgat 199  Q
    ||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||||| |||||| |||  ||| |    
T  37740503 ctcttcatgctctccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacatttggt 37740405  T
Q  200 gcgtacgatccaaggtacgacc 221  Q
    | |||||| |||||||||||||    
T  37740404 gtgtacgacccaaggtacgacc 37740383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 52093882 - 52094075
Alignment:
Q  28 tcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgc 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||| |||    
T  52093882 tcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctgtccttcaaaatttgc 52093981  T
Q  128 aaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| ||||    
T  52093982 aaagaacacttatataggagtcttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgcttacgacccaaggtatgacc 52094075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 5370277 - 5370484
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||  |||||||||||||||||||||||||    
T  5370277 ttcactcaccaaagtgtttacaatgtttcccagcccaagagaactataatcaaagaccctaaaccctaaagttgtctcctttgatttctcaagtttctct 5370376  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacg-tttttcccagatcgtgtcacgattgat 199  Q
    ||||||||| |||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||| ||||||||  |||||| ||||||||||    
T  5370377 ctcttcaagttctccttcaaaatctgcaaagaacacttatatagttgtcttcagcgtcgaaatcgtgtcacgttttttccccaatcgtgccacgattgat 5370476  T
Q  200 gcgtacga 207  Q
    ||||||||    
T  5370477 gcgtacga 5370484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 26175826 - 26176003
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  26175826 ttcactcacccaaggtgtttacaatgtttcccaacccaacagaactttaatcaaagaccctcaactctaaagttacctcctttgatttcccaagtttctc 26175925  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttt 176  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  26175926 tctcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt 26176003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 12739742 - 12739917
Alignment:
Q  3 cactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 101  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12739742 cactcacctaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 12739841  T
Q  102 tcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttt 176  Q
    ||||||| |||   ||||||||||| |||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  12739842 tcttcaacctccacttcaaaatctgtaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt 12739917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 12747948 - 12748123
Alignment:
Q  3 cactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 101  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12747948 cactcacctaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 12748047  T
Q  102 tcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttt 176  Q
    ||||||| |||   ||||||||||| |||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  12748048 tcttcaacctccacttcaaaatctgtaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt 12748123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 34570604 - 34570821
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  34570604 ttcactcacccaagatgttttcaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagctacctcctttgatttcccaagtttctc 34570703  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||| ||| ||||||| ||||||||||||||||||||| ||||||  |||||||||| ||| ||||||||||||| |||||||| |||||| |||| |||     
T  34570704 tctgttccagctctccttcaaaatctgcaaagaacacatatatagtagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttgg 34570802  T
Q  199 tgcgtacgatccaaggtac 217  Q
    ||||||||| |||||||||    
T  34570803 tgcgtacgacccaaggtac 34570821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 29254463 - 29254251
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||| |||    
T  29254463 ccaatgtgtttacaatgtttcccaacccaagagaactctactcaaagaccttcaaccctaaagttatctcctttgatttcccaagtttctctctctacaa 29254364  T
Q  109 gctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacga 207  Q
     ||| | |||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| ||| |||||| |||| ||| |||||||||    
T  29254363 cctcaccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttt-ccaaatcgtgacacgtttggtgcgtacga 29254265  T
Q  208 tccaaggtacgacc 221  Q
    |||||  |||||||    
T  29254264 tccaaaatacgacc 29254251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 9927648 - 9927800
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  9927648 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctct 9927747  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttca 153  Q
    |||||||||| ||| ||||||||||||| ||||||||||| || |||||||||    
T  9927748 ctcttcaagccctccttcaaaatctgcagagaacacttatttagcagtcttca 9927800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 54200096 - 54200317
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  54200096 ttcactcacccaatgtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcctaagtttctc 54200195  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||  ||||||  ||||||| || ||||||||||||||||| |||||||||||  || ||||||||||||  |||||||| |||||| |  | |||     
T  54200196 tctctttcagctcttcttcaaaaactacaaagaacacttatatagcagtcttcagctatcaaaatcgtgtcac-attttcccaaatcgtgactagtttgg 54200294  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||||    
T  54200295 tgcgtacgacccaaggtacgacc 54200317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 12745626 - 12745799
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||  |||| ||||||||||    
T  12745626 ttcactcacccaaggtgtttacattgtttcccaaaccaagagaactctaatcaaagaccctcaactctaaagttacctccttttttttcccaagtttctc 12745725  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacg 172  Q
    ||||||||| |||   |||||||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||    
T  12745726 tctcttcaacctcaacttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgacacg 12745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 5269066 - 5268853
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   || ||||||||||||||||||    
T  5269066 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttca 5268968  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||  |||||||||||||||| | ||| |||||| |||||||| |||||||    
T  5268967 agctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtac 5268869  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  5268868 gacccaaggtacgacc 5268853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 13992476 - 13992682
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |  ||||||||||| ||||||||||    
T  13992476 ttcactcaccaaggtgtttacaatgtttcccaacccaagagagactctaatcaaagaccctaaaccctaaagttgctacctttgatttcccaagtttctc 13992575  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtctt-cagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattg 197  Q
    |||||||||||||||  || ||||||||| ||||||||||| |||  |||||| ||  |   ||||||||||||| |||  |||||||||||||||||||    
T  13992576 tctcttcaagctctccctccaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt--ccagatcgtgtcacgattg 13992673  T
Q  198 atgcgtacg 206  Q
    || ||||||    
T  13992674 atacgtacg 13992682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 36315096 - 36314883
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||| ||||||||||||||||||||||||||||| | |||   ||||||| || ||||||||||||||||||||||   || ||||||| ||||||||||    
T  36315096 ccaatgtgtttacaatgtttcccaacccaagagatcctctctacaaagacactaaaccctaaagttacctcctttgtaatc-caagtttatctctcttca 36314998  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||| | ||| |||||| |||||||| |||||||    
T  36314997 agctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtac 36314899  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  36314898 gacccaaggtacgacc 36314883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 36329305 - 36329092
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||| ||||||||||||||||||||||||||||| | |||   ||||||| || ||||||||||||||||||||||   || ||||||| ||||||||||    
T  36329305 ccaatgtgtttacaatgtttcccaacccaagagatcctctctacaaagacactaaaccctaaagttacctcctttgtaatc-caagtttatctctcttca 36329207  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||| | ||| |||||| |||||||| |||||||    
T  36329206 agctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtac 36329108  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  36329107 gacccaaggtacgacc 36329092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 8689362 - 8689150
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||| ||||||||||||||||||||| |   | | ||||||| || ||||||||||||||||||||||   || |||||||||||| |||||    
T  8689362 ccaaggtgtttaaaatgtttcccaacccaagagatcctcactacaaagacactaaaccctaaagttacctcctttgtaatc-caagtttctctcacttca 8689264  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||||  ||| |||||| |||||||| |||||||    
T  8689263 agctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaatcgtggcacgattggtgcgtac 8689166  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  8689165 gacccaaggtacgacc 8689150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 16623159 - 16622947
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   || |||||||||||||||||     
T  16623159 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttct 16623061  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| || |||||||||||| ||| ||||| | ||| |||||||||||||||||  ||| |||||| |||||||| |||||||    
T  16623060 agctctccttcaaaatctgcacaaaaacacttatatagcagccttcacctgtcaaaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgtac 16622963  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  16622962 gacccaaggtacgacc 16622947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 25861898 - 25861686
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||||||||||||||||| |   | | ||||||| ||||||||||||||||||| |||||   || |||||||||||||||  ||    
T  25861898 caaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttaccttctttgtaatc-caagtttctctctctaaaa 25861800  T
Q  109 gctctctttcaaaatctgcaaag-aacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacg 206  Q
    |||||| |||||||||||||||| ||||||||||||  |||||||| | ||| |||||||||||||||| | ||| |||||| |||||||||||||||||    
T  25861799 gctctccttcaaaatctgcaaagaaacacttatatagaagtcttcaactgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattgatgcgtacg 25861701  T
Q  207 atccaaggtacgacc 221  Q
    | |||||||||||||    
T  25861700 acccaaggtacgacc 25861686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 3777780 - 3777992
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   || ||||||||||||||||||    
T  3777780 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttca 3777878  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||| | ||||||||||||| ||||||| ||||||| ||||||||||| ||| ||||| ||||| |||||  ||| | |||| |||||||| |||||||    
T  3777879 agctcaccttcaaaatctgcacaagaacatttatatagcagtcttcagctgtcaaaatcatgtcaagtttt--ccaaaacgtggcacgattggtgcgtac 3777976  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  3777977 gacccaaggtacgacc 3777992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 51 - 221
Target Start/End: Original strand, 54867453 - 54867623
Alignment:
Q  51 caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtc 149  Q
    ||||||| |||||||||||||||||||||||||   || ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||  ||||    
T  54867453 caaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttcaagctctcctccaaaatctgcacaagaacacttatatagtagtc 54867551  T
Q  150 ttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    |||||| ||| |||||||||||||||| | ||| |||||| |||||||| |||||||||||||||||||||||    
T  54867552 ttcagctgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtacgatccaaggtacgacc 54867623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 36994502 - 36994368
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||||||    
T  36994502 ttcactcacccaaggtgtttacaatgtttgccaaatcaagagaactctaatcaaagaccctcaacca-aaagttacctcctttgattttccaagtttctc 36994404  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaaca 135  Q
    ||||||||| ||||| ||||||||||||||||||||    
T  36994403 tctcttcaacctctccttcaaaatctgcaaagaaca 36994368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 16628738 - 16628526
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   || ||| |||||||||||||     
T  16628738 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgcaatc-caattttctctctcttct 16628640  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||| | || |||||||||||| ||| ||||| | ||| |||||||||||||||||  ||| |||||| |||||||| |||||||    
T  16628639 agctctccttcaaaatctgaacaaaaacacttatatagcagccttcatctgtcaaaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgtac 16628542  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  16628541 gacccaaggtacgacc 16628526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 5871798 - 5871683
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||  |    
T  5871798 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccataaccctaaagttacctcctttgatttcccaagttttcc 5871699  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  5871698 tctcttgaagttctct 5871683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 6743281 - 6743068
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| | ||    ||||||| ||||| ||| |||||||||||||||   || ||||||||||||||||||    
T  6743281 ccaaggtgtttacaatgtttcccaacccaagagatcctcgctacaaagacactcaaacctcaagttacctcctttgtaatc-caagtttctctctcttca 6743183  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||  ||||||||||||| ||||||||||||||| ||||||||| | ||| |||| |||||| | |||||||| |||||| |||||||  |||||||    
T  6743182 agctctacttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcaag-ttttcccaaatcgtgacacgattagtgcgtac 6743084  T
Q  206 gatccaaggtacgacc 221  Q
    |  |||||||||||||    
T  6743083 gtcccaaggtacgacc 6743068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 10047612 - 10047806
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat--caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 106  Q
    |||||||||||||||||||||||||||||||||| | || ||  ||||||| |||||||||||||||||||||||||   || |||||||||||||||||    
T  10047612 ccaaggtgtttacaatgtttcccaacccaagagatc-ctcattacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttc 10047709  T
Q  107 aagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgta 204  Q
    |||||||| ||||||||||||| ||||||||||||     |||||||| | ||| |||||||||||||||| | ||| |||||| |||||||| ||||||    
T  10047710 aagctctccttcaaaatctgcacaagaacacttat-----agtcttcaactgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgta 10047803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 13009621 - 13009736
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||  |    
T  13009621 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaagttacctcatttgatttcccaagttttcc 13009720  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  13009721 tctcttgaagttctct 13009736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 24969090 - 24968975
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||| |    
T  24969090 ttcactcacccaaggtgtttacaaatgtttcccaacccaagagaactctaatcaaagaccgtcaaccttaaagttacctcctttgatttcccaagttttt 24968991  T
Q  99 ctctcttcaagctctc 114  Q
    ||||||| ||| ||||    
T  24968990 ctctcttgaagttctc 24968975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 52467544 - 52467657
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| | | |||||||    
T  52467544 ttcactcacccaaggtgtttacaaatgtttcccaacccaagagaaccctaatcaaagaccctcaaccctaaaattacctcctttgattaccctagtttct 52467643  T
Q  99 ctctcttcaagctc 112  Q
    ||||||| ||||||    
T  52467644 ctctcttgaagctc 52467657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 47038599 - 47038687
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttc 88  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47038599 ttcactcacccaaggtgtttataatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttaactcctttgatttc 47038687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 5396537 - 5396372
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||| ||||||||||   || |||||||||||||||||     
T  5396537 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagtaacctcctttgtaatc-caagtttctctctcttcc 5396439  T
Q  108 agctctctttcaaaatctgc-aaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacg 172  Q
    ||||||| ||||||||||||  ||||||||||||||| ||||||||||| ||| |||||||| ||||    
T  5396438 agctctccttcaaaatctgctcaagaacacttatatagcagtcttcagctgtcaaaatcgtggcacg 5396372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 31985499 - 31985288
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||||||||||||  ||| |  |||| || ||||||||||||||| |||||||||   || ||||||||||||||||||    
T  31985499 ccaaggtgtttacaatgtttcccaacccaagagatcctcaatacaaaaacactcaaccctaaagttccctcctttgtaatc-caagtttctctctcttca 31985401  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||| | ||||||||||||| ||||||||||| |||  |||||||| | |   |||||||| |||| |||  ||| |||||||||||||||||||||||    
T  31985400 agctcac-ttcaaaatctgcacaagaacacttaaatactagtcttcaactgataaaatcgtgccacgattt--ccaaatcgtgtcacgattgatgcgtac 31985304  T
Q  206 gatccaaggtacgacc 221  Q
    |   ||||||||||||    
T  31985303 gtcacaaggtacgacc 31985288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 38152304 - 38152091
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||| ||||||| ||||||||| |   | | ||||||| |||||||||||||||||||| ||||   ||  || |||||||||||||     
T  38152304 ccaaggtgtttacaatatttcccatcccaagagatcctcactacaaagacactcaaccctaaagttacctcatttgtaatccaaattttctctctcttcc 38152205  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    |||||| |||||||||||||| | ||||||||||||| |||| |||||| ||| |||||||||||| ||||| | | || ||   |||||||||||||||    
T  38152204 agctct-tttcaaaatctgcacaggaacacttatatagcagtattcagctgtcaaaatcgtgtcacattttttcaaaat-gtaaaacgattgatgcgtac 38152107  T
Q  206 gatccaaggtacgacc 221  Q
    ||||||||||||||||    
T  38152106 gatccaaggtacgacc 38152091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 5147909 - 5148121
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||| ||||||||||||||||||||| ||||||| |  || | ||||||| || ||||||||||||||||||| ||   || ||||||||||||  ||||    
T  5147909 ccaatgtgtttacaatgtttcccaactcaagagatccttactacaaagacactaaaccctaaagttacctcctgtgtaatc-caagtttctctcatttca 5148007  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||| | | |   | |||||||||||||||   || |||||| |||||||| |||||||    
T  5148008 agctctccttcaaaatctgcacaagaacacttatatagcagtcttaaactgataagatcgtgtcacgtttt--gcaaatcgtgacacgattggtgcgtac 5148105  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  5148106 gacccaaggtacgacc 5148121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 5112468 - 5112574
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||||| ||  | ||||||| ||||| |||||| ||||||||||||   |||||||||||||||||||||    
T  5112468 ccaaggtgtttacaatgtttcccaacccaagagaacctcacaacaaagacactcaaacctaaaattacctcctttgtaatctcaagtttctctctcttca 5112567  T
Q  108 agctctc 114  Q
    |||||||    
T  5112568 agctctc 5112574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 3910075 - 3909983
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctct 102  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| |||| |||||| |||||||||||||||||||| | ||||| |||||    
T  3910075 caaggtgtttacaatgtttctcaacctaagagaactctaatcaaaggccctaaacccttaagttacctcctttgatttccctagtttttctct 3909983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 5143493 - 5143704
Alignment:
Q  11 aaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaag 109  Q
    ||||||||||||| ||||||||| |||||||| |   | | ||||||| |||||||||||||||||||||| ||   || |||||||||||  |||||||    
T  5143493 aaggtgtttacaaagtttcccaatccaagagatcctcactacaaagacactcaaccctaaagttacctcctctgtaatc-caagtttctcttacttcaag 5143591  T
Q  110 ctctctttcaaaatctgca-aagaacacttatataacagtcttcag--cgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacg 206  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||||    |  |||||||||||||||||  ||| |||||| |||||||| |||| ||     
T  5143592 ctctccttcaaaatctgcacaagaacacttatatagcagtcttcagtagataaaaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgcaca 5143689  T
Q  207 atccaaggtacgacc 221  Q
    | ||||||| |||||    
T  5143690 acccaaggtgcgacc 5143704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 31495509 - 31495639
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||||||  | ||||||| ||||||  ||||||||||| ||||||||||||||||| |    
T  31495509 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactataaaccctagagttactccctttgatttcccaagtttctctctcttcca 31495608  T
Q  109 gctctctttcaaaatctgca-aagaacactta 139  Q
     ||||| ||| ||||||||| |||||||||||    
T  31495609 actctccttc-aaatctgcacaagaacactta 31495639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 45687422 - 45687496
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 110  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||    
T  45687422 caagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagc 45687496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 37229962 - 37230039
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  37229962 caagataaccctaatcaaagaccctaaaccctaaagttacctcctttgatttctcaagtttgtctctcttgaagctct 37230039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 46147581 - 46147658
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  46147581 caagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagctct 46147658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5208032 - 5208140
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||||| ||||||||||||| |||||||||| |||||||||| || | ||||||||| |||||||| ||||||||||||||||||  ||| |||||    
T  5208032 ttcactcacccaaggtgtttacaaatgtttcccaatccaagagaaccctcaccaaagacccgcaaccctatagttacctcctttgattttccaaatttct 5208131  T
Q  99 ctctcttca 107  Q
    |||||||||    
T  5208132 ctctcttca 5208140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 21704040 - 21704128
Alignment:
Q  22 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 110  Q
    |||||||| |||||||||||||| || | |||||||  |||||| |||||||||||| |||||||||||||||||||||||||| ||||    
T  21704040 aatgtttctcaacccaagagaaccctcaccaaagactttcaaccttaaagttacctcatttgatttctcaagtttctctctcttgaagc 21704128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 6542371 - 6542475
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaat--caaagaccctcaaccctaaagttacctcctttgatttctcaagtttc 97  Q
    |||||||||| |||||||||||||||||||||||||||||||||| || ||  ||||||| |||||||||||||||||||||||||  |||  | |||||    
T  6542371 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaac-ctcattacaaagacactcaaccctaaagttacctcctttgtattcctaggtttc 6542469  T
Q  98 tctctc 103  Q
    ||||||    
T  6542470 tctctc 6542475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 23042988 - 23043093
Alignment:
Q  9 ccaaggtgtttacaa-tgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 106  Q
    ||||||||||||||| |||||||||| | |||||||| ||| | |||||||| |||||||||||||||  || ||||||||||||||||||||||| ||     
T  23042988 ccaaggtgtttacaaatgtttcccaatctaagagaacctcttaccaaagaccttcaaccctaaagttaaatcttttgatttctcaagtttctctctgttg 23043087  T
Q  107 aagctc 112  Q
    ||||||    
T  23043088 aagctc 23043093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 42599440 - 42599306
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||| |||||||||||||| ||||||||   | | ||||||| ||||||| |||||||||||||||||   || |||||||||||| ||  |    
T  42599440 ccaaggtgtttagaatgtttcccaaccgaagagaacctcactacaaagacactcaacc-taaagttacctcctttgtaatc-caagtttctctcactaaa 42599343  T
Q  108 agctctctttcaaaatctgcaaag-aacacttatata 143  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  42599342 agctctccttcaaaatctgcaaagaaacacttatata 42599306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 48142591 - 48142651
Alignment:
Q  22 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctccttt 82  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  48142591 aatgtttcccaactcaagagaaccctaatcaaagaccatcaaccctaaagttacctccttt 48142651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 207
Target Start/End: Complemental strand, 35662097 - 35661980
Alignment:
Q  90 caagtttctctctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttttcccagatcgtg 188  Q
    ||||||| ||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||  ||| |||| || ||||| |||| ||| ||||||    
T  35662097 caagtttttctctcttcaacctctccatcaaaatctgcaaagaacacttatatagcagtcttcagttgtcaaaattgtatcacg-ttttgccaaatcgtg 35661999  T
Q  189 tcacgattgatgcgtacga 207  Q
     |||| ||| |||||||||    
T  35661998 acacggttggtgcgtacga 35661980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 36463639 - 36463705
Alignment:
Q  47 taatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||||||| |||||||| |||||||    
T  36463639 taatcaaagaccctcaatcctaaagttacctcctatgatttcccaagtttttctctcttgaagctct 36463705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 6677447 - 6677360
Alignment:
Q  1 ttcactca-ccaaggtgtttacaa-tgtttcccaacccaagagaactc-taatcaaagaccctcaaccctaaagttacctcctttgat 85  Q
    |||||||| |||| |||||||||| ||||||||||||||||||||| | | | ||||||| |||||||||||||||||||||||||||    
T  6677447 ttcactcatccaatgtgtttacaaatgtttcccaacccaagagaacccctgaacaaagacactcaaccctaaagttacctcctttgat 6677360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 37755113 - 37755220
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa-tgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttc 97  Q
    |||||||||| ||||||||||||| | ||||  || |||||||||| ||| | ||||||| ||||| |||||||||||||||||||||||  ||||||||    
T  37755113 ttcactcacctaaggtgtttacaaatatttcataatccaagagaacctctcaccaaagactctcaatcctaaagttacctcctttgattttccaagtttc 37755212  T
Q  98 tctctctt 105  Q
    ||||||||    
T  37755213 tctctctt 37755220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 24334042 - 24334139
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||||||||||||||||||||||  ||||||||   | | ||||||| ||||||||||||||||||| |||||  ||| ||||||||||||||    
T  24334042 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagactctcaaccctaaagttaccttctttgtattcccaagtttctctctc 24334139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 39774171 - 39774053
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||| ||||||||| ||    |||| |  |||||||||||||||||||||||||    | |||||||||||||||| |    
T  39774171 ccaaggtgtttacaatgtttcccaactcaagagaacctcgttacaaataatctcaaccctaaagttacctcctttgtaaacccaagtttctctctcttta 39774072  T
Q  108 agctctctttcaaaatctg 126  Q
    | ||||  |||||||||||    
T  39774071 aactctacttcaaaatctg 39774053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 6376030 - 6375950
Alignment:
Q  22 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    |||||| |||||||||||| | || | | |||||||||||||||||||| ||||||||||||||||| |||| |||||||||    
T  6376030 aatgttccccaacccaaga-atctttcaccaaagaccctcaaccctaaaattacctcctttgatttcccaagattctctctc 6375950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 31474128 - 31474059
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaa 69  Q
    |||||||||| || |||||||||||||||||||  ||||||||||  |||||||||||||||||||||||    
T  31474128 ttcactcacccaaagtgtttacaatgtttcccactccaagagaaccttaatcaaagaccctcaaccctaa 31474059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 51337042 - 51336938
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||||| |||||||||||||||||| |||||||||||||| |||    |||||||  |||||||||||||||| |||||||  |||  ||||||||    
T  51337042 ttcactcacccaaggtgtttacaatgttttccaacccaagagaacctcactacaaagacattcaaccctaaagttacttcctttgtattcctaagtttct 51336943  T
Q  99 ctctc 103  Q
    |||||    
T  51336942 ctctc 51336938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 39593958 - 39594053
Alignment:
Q  10 caaggtgtttacaa-tgtttc-ccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctct 102  Q
    |||||||||||||| |||||| ||||||||||||||| | | ||||||||| | ||||| |||||||||||| ||||||||| |||| ||||||||    
T  39593958 caaggtgtttacaaatgtttctccaacccaagagaacctatcatcaaagactcccaaccttaaagttacctcatttgatttcccaaggttctctct 39594053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 3793946 - 3793849
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaatc-aaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    |||||||||||||||||||| |||||||  ||||||||   | |  |||||| ||||||||||||||||||||||||   ||| ||||||||||||||    
T  3793946 ccaaggtgtttacaatgttttccaaccctcaagagaacctcactataaagacactcaaccctaaagttacctcctttatattcccaagtttctctctc 3793849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 27417520 - 27417580
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||||||||||| ||| |||| |||||| |||| ||||||||||||| |||||||||||||    
T  27417520 aaatcgtgtcacgattt-cccaaatcgtgacacggttgatgcgtacgacccaaggtacgacc 27417580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4587936 - 4587892
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaac 44  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||    
T  4587936 ttcactcacccaaggtgtttacaatgtttcccaacccatgagaac 4587892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 5136041 - 5135911
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||| ||| | ||||||  |||||||||||| |||||||||||||| |||| ||||||| || | || ||||||||||| ||||||||||||| | ||    
T  5136041 caaggtatttcccatgtttttcaacccaagagatactctaatcaaagaaccctaaaccctagagcttcc-cctttgatttcccaagtttctctct-tcca 5135944  T
Q  108 agctctctttcaaaatctgca-aagaacactta 139  Q
    | |||||| |  ||||||||| |||||||||||    
T  5135943 acctctctcttcaaatctgcacaagaacactta 5135911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36463579 - 36463623
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaac 44  Q
    |||||||||| |||||||||||||||||||||||| |||||||||    
T  36463579 ttcactcacccaaggtgtttacaatgtttcccaactcaagagaac 36463623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 5138246 - 5138137
Alignment:
Q  31 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgca 128  Q
    |||||||||||| |||||||||||||| |||| ||||||| || | || ||||||||||| ||||||||||||| | ||| |||||| |  |||||||||    
T  5138246 caacccaagagatactctaatcaaagaaccctaaaccctagagcttcc-cctttgatttcccaagtttctctct-tccaacctctctcttcaaatctgca 5138149  T
Q  129 -aagaacactta 139  Q
     |||||||||||    
T  5138148 caagaacactta 5138137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 21548697 - 21548638
Alignment:
Q  52 aaagaccctcaaccctaaagttacctccttt-gatttctcaagtttctctctcttcaagc 110  Q
    |||||| || ||||||||||||  ||||||| ||||||||||| ||||||||||||||||    
T  21548697 aaagacacttaaccctaaagttctctcctttagatttctcaagattctctctcttcaagc 21548638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 31473850 - 31473803
Alignment:
Q  66 ctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    ||||||||||||||||||||||||||| ||| | |||||| |||||||    
T  31473850 ctaaagttacctcctttgatttctcaaatttttatctcttgaagctct 31473803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 37782094 - 37782192
Alignment:
Q  9 ccaaggtgtttacaa-tgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    ||||||||||||||| ||||| ||||||||||||| | ||| | ||||||   ||||| ||||||||||||| ||||||||| ||| ||| ||| ||||    
T  37782094 ccaaggtgtttacaaatgttttccaacccaagagagcctctcaccaaagatattcaactctaaagttacctcatttgatttcccaaatttttctttctt 37782192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 41639070 - 41639032
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  41639070 aaatcgtgtcacgtttttccaaaatcgtgtcacgattga 41639032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 28468123 - 28468087
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgatt 196  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  28468123 aaatcgtgtcacgattttccaagatcgtgtcacgatt 28468087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 2334608 - 2334828
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  2334608 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaataccctcaaccctaaagttacctcctttgatttcccaagtttctct 2334707  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2334708 ctcttcaagctcaccttcaaaatctgcaaagaacacttatatagcagtcttcagcgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatg 2334807  T
Q  201 cgtacgatccaaggtacgacc 221  Q
     |||||| |||||||||||||    
T  2334808 tgtacgacccaaggtacgacc 2334828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 5723445 - 5723665
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  5723445 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccccaaaccctaaagttgcctcctttgatttcccaagtttctct 5723544  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||||  |||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  5723545 ctcttcaagctcttcttcaaaatctgcaaagaacatttatatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatg 5723644  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    ||||||| |||||||||||||    
T  5723645 cgtacgacccaaggtacgacc 5723665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 36988266 - 36988486
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36988266 ttcactcaccaaggtgtttactatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctct 36988365  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| |||| |    |||||||||| |||||||    
T  36988366 ctcttcaagctctccttcaaaatatgcaaagaacacttatatagcagtcttcagcgtcaaaatcgtgtcacattttccatcaatcgtgtcacaattgatg 36988465  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    ||||||| |||||||||||||    
T  36988466 cgtacgacccaaggtacgacc 36988486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 45099732 - 45099512
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||||||||||    
T  45099732 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctct 45099633  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||| | |||||||||| ||||||||||||||||| | |||||| ||||| |||||||||||||||||||||  |||||| |||||||||||    
T  45099632 ctcttcaagctcaccttcaaaatctacaaagaacacttatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatg 45099533  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||||||| ||||||||||||    
T  45099532 cgtacgattcaaggtacgacc 45099512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 4503323 - 4503543
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||||||| |||||||||||    
T  4503323 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaacctaaaccctaaagttgcttcctttgatttcccaagtttctct 4503422  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||| ||||||| ||||||||||||||||||||||||||||   ||||||  |||| |||||||||||||||||||||  |||||| ||| |||||||    
T  4503423 ctcttctagctctccttcaaaatctgcaaagaacacttatatagttgtcttctacgtcaaaatcgtgtcacgtttttccccaatcgtgccacaattgatg 4503522  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||||||||||||||||||||    
T  4503523 cgtacgatccaaggtacgacc 4503543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 36205854 - 36206076
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||||||||||    
T  36205854 ttcactcaccaaggtgtttaccatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctct 36205953  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacact--tatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    |||||||||||| | ||||||||||||||||||||||  |||||| | |||||| ||||| |||||||||||||||||||||  |||||| ||| |||||    
T  36205954 ctcttcaagctcaccttcaaaatctgcaaagaacacttatatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacaattga 36206053  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||| |||||||||||||||    
T  36206054 tgcgtacaatccaaggtacgacc 36206076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 39284863 - 39284656
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39284863 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 39284764  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||| |||||||| |||||| |||  |||     
T  39284763 tctcttcaacctctccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcatgtcacg-ttttcccaaatcgtgacacatttgg 39284665  T
Q  199 tgcgtacga 207  Q
    |||||||||    
T  39284664 tgcgtacga 39284656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 6595198 - 6595403
Alignment:
Q  2 tcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 101  Q
    |||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||    
T  6595198 tcactctccaaagtgtttacaatttttcccagcccaagagaactctaatcaaagaccctcaaccctaaagttacctcatttgatttcctaagtttctctc 6595297  T
Q  102 tcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgc 201  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| |    ||||||||| |||||||||    
T  6595298 tcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcaacgtcaaaatcgtgtcacgttttccatcaatcgtgtcaagattgatgc 6595397  T
Q  202 gtacga 207  Q
    ||||||    
T  6595398 gtacga 6595403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 29867847 - 29867641
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||| |  |||||||||    
T  29867847 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaacccaatagttaccttctttgattcccaaagtttctc 29867748  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    |||||| |||||||||||||||| |||||||||||||||||||| ||||||||| | ||| |||||||||||||||||||||| |||||| |||| |||     
T  29867747 tctctttaagctctctttcaaaaactgcaaagaacacttatatagcagtcttcatctgtcaaaatcgtgtcacgtttttcccaaatcgtgacacgtttgg 29867648  T
Q  199 tgcgtac 205  Q
    |||||||    
T  29867647 tgcgtac 29867641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 38312218 - 38312045
Alignment:
Q  1 ttcactcac-caaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||    
T  38312218 ttcactcacacaaggtgtatacaatgtttcccaacccaagagaactctaatcaaagaacctcaaccctaaagttacctcctttgatttcccaaatttctc 38312119  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacg 172  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||    
T  38312118 tctcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg 38312045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 36318199 - 36318420
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||    
T  36318199 ttcactcacccaaggtgtttacaatatttcccaacccaagataactctaatcaaagacattcaaccctaaagttacctcctttgatttcccaagtttctc 36318298  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||  | ||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||  || || ||| |||| |||     
T  36318299 tctcttttacctctccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttgtcaaattgtgacacggttgg 36318397  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    |||||||||| ||||||||||||    
T  36318398 tgcgtacgattcaaggtacgacc 36318420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 17057559 - 17057714
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  || ||||||    
T  17057559 ttcactcacccaaggtgtttacaatatttcccaacccaagagaactctaatcaaagaccttcaaccctaaagttacctccgttgatttccaaattttctc 17057658  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc 155  Q
    ||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  17057659 tctcttcaaactctccttcaaaatctgcaaagaacacttatatagcagtcttcagc 17057714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 17085542 - 17085697
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||  || ||||||    
T  17085542 ttcactcacccaaggtgtttacaatatttcccaacccaagagaactctaatcaaagaccttcaaccctaaagttacctccgttgatttccaaattttctc 17085641  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc 155  Q
    ||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||    
T  17085642 tctcttcaaactctccttcaaaatctgcaaagaacacttatatagcagtcttcagc 17085697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 34389082 - 34389294
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| | |||||||||||||||||||||||   || |||||||||||| | |||    
T  34389082 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacacacaaccctaaagttacctcctttgtaatc-caagtttctctcacatca 34389180  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||||  ||| |||||| |||||||| |||||||    
T  34389181 agctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgtac 34389278  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  34389279 gacccaaggtacgacc 34389294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 4484523 - 4484741
Alignment:
Q  3 cactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||  ||||||||||| ||||||||||||    
T  4484523 cactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagtttctctc 4484622  T
Q  102 tcttcaagctctctttcaaaatctgca-aagaacacttatataacagtctt-cagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgat 199  Q
    ||||| | ||||||||| ||||||||| ||||||||||| |||  || ||| ||  |   ||||||||||||| |||  ||||||||||||||||||| |    
T  4484623 tcttccaactctctttc-aaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt--ccagatcgtgtcacgattggt 4484719  T
Q  200 gcgtacgatccaaggtacgacc 221  Q
     ||||||  |||||||||||||    
T  4484720 acgtacgtcccaaggtacgacc 4484741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 219
Target Start/End: Complemental strand, 33528490 - 33528279
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||| ||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   || ||||||||||||||||||    
T  33528490 ccaatgtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttca 33528392  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||  ||  |||||||||||||||| | ||| |||||| |||||||| |||||||    
T  33528391 agctctccttcaaaatctgcacaagaacacttatatagcagtcttcagttgttaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtac 33528293  T
Q  206 gatccaaggtacga 219  Q
    || |||||||||||    
T  33528292 gacccaaggtacga 33528279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 23078337 - 23078125
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat--caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 106  Q
    ||||||||||||||||||||||||||||||||| | ||| ||  ||||||| |||||||| ||||||||||||||||   || |||||||||||| ||||    
T  23078337 ccaaggtgtttacaatgtttcccaacccaagag-attctcatcacaaagacactcaacccaaaagttacctcctttgtaatc-caagtttctctcacttc 23078240  T
Q  107 aagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgta 204  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||||||| | ||| |||| ||||||||||||  ||| |||||| |||||||| ||||||    
T  23078239 aagctctccttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcacgtttt--ccaaatcgtggcacgattggtgcgta 23078142  T
Q  205 cgatccaaggtacgacc 221  Q
    ||| ||||| |||||||    
T  23078141 cgacccaagatacgacc 23078125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 11151781 - 11151896
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |    
T  11151781 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcc 11151880  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  11151881 tctcttgaagttctct 11151896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 177
Target Start/End: Complemental strand, 36757628 - 36757458
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   | ||||||||||||| |||||    
T  36757628 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaat-tcaagtttctctcacttca 36757530  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgttttt 177  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  36757529 agctctccttcaaaatctgcacaagaacacttatataacagtcttcagctgtcaaaatcgtgtcacgatttt 36757458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 42362330 - 42362215
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |    
T  42362330 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcc 42362231  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  42362230 tctcttgaagttctct 42362215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 52 - 221
Target Start/End: Original strand, 2837086 - 2837255
Alignment:
Q  52 aaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtctt 151  Q
    ||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||||| |||||||| | ||||||||||||||||| |||||||    
T  2837086 aaagatcctcaaccttaaaattacctcctttgatttcccaagtttctctctcttcaaactctccttcaaaatttacaaagaacacttatatagcagtctt 2837185  T
Q  152 cagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    |||| ||| ||||||||| ||| |||||||| ||| || |||| ||| ||||||||| |||||||||||||    
T  2837186 cagctgtcaaaatcgtgttacg-ttttcccaaatcatgacacgtttggtgcgtacgacccaaggtacgacc 2837255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 11690479 - 11690364
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||  |    
T  11690479 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactataatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcc 11690380  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  11690379 tctcttgaagttctct 11690364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 21630176 - 21630389
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| |||||| ||||||||||||||||||   || |||||||||||| |||||    
T  21630176 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaacactaaagttacctcctttgtaatc-caagtttctctcccttca 21630274  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| |||||||||| || ||||||||||||||| ||||||| ||| ||| |||||||||||||||| | ||| |||||| |||||||| || ||||    
T  21630275 agctctccttcaaaatctacacaagaacacttatatagcagtctttagctgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgtgtac 21630373  T
Q  206 gatccaaggtacgacc 221  Q
    || |||| ||||||||    
T  21630374 gacccaaagtacgacc 21630389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 723934 - 724030
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 96  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  723934 ttcactcacccaaggtgtttacaatgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 724030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 28259043 - 28258831
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatc-aaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||| |||||||||||||||||||||||||||| |   | |  |||||| |||||||||||||||||||||||||   || ||||||||||||||||||    
T  28259043 ccaagatgtttacaatgtttcccaacccaagagatcctcactataaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttca 28258945  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||  |||||||||| || ||||||||||||||| ||||||||||  |   |||||||| ||||||||  ||| |||||| ||||||||||||||||    
T  28258944 agctcttcttcaaaatctacacaagaacacttatatagcagtcttcagttgataaaatcgtgccacgtttt--ccaaatcgtgccacgattgatgcgtac 28258847  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  28258846 gacccaaggtacgacc 28258831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 218
Target Start/End: Original strand, 33118366 - 33118576
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||| |||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   || |||||||||||||||  |    
T  33118366 ccaaggtgtttacaatgttccccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctctaaa 33118464  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||  ||||||||||||| ||||||||||||||| ||||||||||  ||| ||||||||||| |||| | ||| |||||| |||||||| |||||||    
T  33118465 agctcttcttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcatgtttgt-ccaaatcgtgacacgattggtgcgtac 33118563  T
Q  206 gatccaaggtacg 218  Q
    || ||||||||||    
T  33118564 gacccaaggtacg 33118576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 33162649 - 33162745
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  33162649 ccaaggtgtttacaatgtttcccaactcaagagaaccctaatcaaagaccctcaaccctaaaattacctcctttgatttcccaagtttctctctctt 33162745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 14202597 - 14202712
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||  |    
T  14202597 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacctcatttgatttcccaagttttcc 14202696  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  14202697 tctcttgaagttctct 14202712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 20522453 - 20522666
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||| ||||||||||| |||||||||||||||| ||||    ||||||| |||||||||||||||||||||||||   ||| |||||||||||||| ||    
T  20522453 ccaagttgtttacaatgcttcccaacccaagagatactcactacaaagacactcaaccctaaagttacctcctttgtaatct-aagtttctctctctcca 20522551  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||| | ||||||||||||| |||||||||| |||| |||| || ||| ||| |||||||||||||||| | ||| || ||| |||||||| |||||||    
T  20522552 agctcaccttcaaaatctgcagaagaacacttttatagcagtttttagctgtcaaaatcgtgtcacgtttgt-ccaaattgtgacacgattggtgcgtac 20522650  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  20522651 gacccaaggtacgacc 20522666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 218
Target Start/End: Complemental strand, 8390015 - 8389805
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||| ||||||||||| |   | | |||||||||||||||||||||||| ||||||||   || |||||||||||||||||     
T  8390015 ccaaggtgtttacaatgtttcctaacccaagagatcatcactacaaagaccctcaaccctaaagttatctcctttgtaatc-caagtttctctctcttcc 8389917  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||  ||||||||||||| | ||||||||| |||||||||||||||  || ||||||||||| |||||| ||| ||| || || ||||| |||||||    
T  8389916 agctctacttcaaaatctgcacaggaacacttaaataacagtcttcagctatcaaaatcgtgtcatgttttt-ccaaatcatgacatgattggtgcgtac 8389818  T
Q  206 gatccaaggtacg 218  Q
    || ||||||||||    
T  8389817 gacccaaggtacg 8389805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 10707118 - 10706906
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||| |||||||||||| |   | | ||||||   | ||||||||||||||||||||||   ||| ||||||||||||||||     
T  10707118 ccaaggtgtttacaatgtttctcaacccaagagatcctcactacaaagataataaaccctaaagttacctcctttgtaatct-aagtttctctctcttcc 10707020  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||  ||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||||  ||| | |||| |||||||| || ||||    
T  10707019 agctcttcttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaaccgtggcacgattggtgtgtac 10706922  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  10706921 gacccaaggtacgacc 10706906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 34139961 - 34140066
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||  |    
T  34139961 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagactttcaaccctaaagttacctcctttgattttccaagttttcc 34140060  T
Q  100 tctctt 105  Q
    ||||||    
T  34140061 tctctt 34140066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14634016 - 14634112
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 96  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||    
T  14634016 ttcactcacccaaggtgtttacaatgtttcccaacccaaaagaactctaatcaaaaaccctcaactctaaagttacctcctttgatttcccaagttt 14634112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 32289550 - 32289411
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||| || ||||||| ||||||  ||||||||||| ||||||||||    
T  32289550 ttcactcaccaaggtgtttaccatgtttccaaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctc 32289451  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacactta 139  Q
    ||||||| | ||| | ||||||||||||| |||||||||||    
T  32289450 tctcttccatctc-ccttcaaaatctgcacaagaacactta 32289411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 14698875 - 14698662
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||| ||||| |   | | ||||||| |||||||||||||||||||||||||   || |||||||||||||||  |    
T  14698875 ccaaggtgtttacaatgtttcccaacccgagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctctaaa 14698777  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| |||||||||| || ||||||||||||||| ||||||||| |  || |||||||||||||||| | ||| ||||||  | | ||| |||||||    
T  14698776 agctctccttcaaaatctacacaagaacacttatatagcagtcttcaactatcaaaatcgtgtcacgtttgt-ccaaatcgtgaaatggttggtgcgtac 14698678  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  14698677 gacccaaggtacgacc 14698662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 223
Target Start/End: Complemental strand, 30833321 - 30833101
Alignment:
Q  3 cactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 101  Q
    |||||||||| ||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||| ||||||  ||||||||||| ||||||||| ||    
T  30833321 cactcaccaaagtgtttacaatgtttcccaacccaagataagctctaatcaaaaaccctaaaccctagagttactccctttgatttcccaagtttctttc 30833222  T
Q  102 tcttcaagctctctttcaaaatctgca-aagaacacttatataacagtctt-cagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgat 199  Q
    ||||| ||||| | ||| ||||||||| ||||||||||| |||  |||||| ||  |   ||||||||||||| |||  |||  |||||||||||||| |    
T  30833221 tcttccagctcaccttc-aaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt--ccaagtcgtgtcacgattggt 30833125  T
Q  200 gcgtacgatccaaggtacgacctg 223  Q
     ||||||   ||||||||||||||    
T  30833124 acgtacgtcacaaggtacgacctg 30833101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 220
Target Start/End: Original strand, 13569560 - 13569773
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc- 106  Q
    |||||||||||| ||||||||||||||||||||| |   | | ||||||| || ||||||||||||| ||| ||||   || ||||||||||||||| |     
T  13569560 ccaaggtgtttataatgtttcccaacccaagagatcctcactacaaagacacttaaccctaaagttatctcatttgtaatc-caagtttctctctctccc 13569658  T
Q  107 aagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgta 204  Q
    |||||||| || |||||||||| |||||||||||||||  |||||||||| ||| |||||||||||  ||||||| | |||||| |||||||| ||| ||    
T  13569659 aagctctcctttaaaatctgcacaagaacacttatatagtagtcttcagctgtcaaaatcgtgtcaaatttttccaa-atcgtgacacgattggtgctta 13569757  T
Q  205 cgatccaaggtacgac 220  Q
    ||||||||||||||||    
T  13569758 cgatccaaggtacgac 13569773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 36773491 - 36773414
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  36773491 caagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 36773414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 151
Target Start/End: Original strand, 17865436 - 17865578
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| ||  | | ||||||| |||||||||||||||||||||||||   || |||| |||| ||||||||    
T  17865436 ccaaggtgtttacaatgtttcccaacccaagagatcttcactacaaagacactcaaccctaaagttacctcctttgtaatc-caag-ttctgtctcttca 17865533  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtctt 151  Q
    ||||||  |||||||| |||| ||||||||||||||| |||||||    
T  17865534 agctcttcttcaaaatttgcacaagaacacttatatagcagtctt 17865578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 12123774 - 12123879
Alignment:
Q  1 ttcactca-ccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||| |||||||||||| || |||||||||||| ||||||||||||| |||||||| |||||| ||||||||||| ||||||||| ||||||||||    
T  12123774 ttcactcatccaaggtgtttataaatgtttcccaacctaagagaactctaaccaaagaccatcaaccttaaagttacctactttgatttttcaagtttct 12123873  T
Q  99 ctctct 104  Q
    | ||||    
T  12123874 ccctct 12123879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 11049474 - 11049393
Alignment:
Q  40 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaa 122  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| ||||||| | ||||||    
T  11049474 agaaccctaatcaaagaccatcaaccctaaa-ttacctcctttgatttcccaagtttctctctcttgaagctctatctcaaaa 11049393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 3278231 - 3278336
Alignment:
Q  9 ccaaggtgtttacaa-tgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 106  Q
    ||||||||||||||| ||||| |||||||||||||| |||| ||||| ||  |||||||||||||||||||| ||||||||||||  |||||||| |||     
T  3278231 ccaaggtgtttacaaatgttttccaacccaagagaatctctcatcaacgatactcaaccctaaagttacctcatttgatttctcagatttctctcccttg 3278330  T
Q  107 aagctc 112  Q
    ||||||    
T  3278331 aagctc 3278336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 40015156 - 40015273
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||| |||||||||||||||||||||||||||||||   |||  || || |||||||||||||||||||||||||    |  || |||||||||||||||    
T  40015156 ccaatgtgtttacaatgtttcccaacccaagagaacctcaatacaaaacactcaaccctaaagttacctcctttgtaaacctaaatttctctctcttcaa 40015255  T
Q  109 gctctctttcaaaatctg 126  Q
    |||||  |||||||||||    
T  40015256 gctctacttcaaaatctg 40015273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 12632912 - 12633022
Alignment:
Q  9 ccaaggtgtttacaa-tgtttcccaacccaagaga---actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctct 104  Q
    ||||||||||||||| |||||| |||||||| | |   ||||| || |||||| |||||||||||||||| |||||||| |||| |||||||||||||||    
T  12632912 ccaaggtgtttacaaatgtttctcaacccaataaataaactctcattaaagacactcaaccctaaagttatctcctttggtttcccaagtttctctctct 12633011  T
Q  105 tcaagctctct 115  Q
    | |||| ||||    
T  12633012 tgaagcactct 12633022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24885639 - 24885583
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaaga 56  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  24885639 ttcactcacccaaggtgtttacaatgtttcccaacccatgagaactctaatcaaaga 24885583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 7815523 - 7815580
Alignment:
Q  46 ctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  7815523 ctaatcaaagaccctcaaccctaaagttacctcc-ttgatttctcaagttt-tctctctt 7815580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 41586417 - 41586322
Alignment:
Q  9 ccaaggtgtttacaa-tgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctct 102  Q
    ||||||||||||||| ||||| |||||||||||||| |||| | ||||||| ||||||||||||||||| || | ||||||  |||||||||||||    
T  41586417 ccaaggtgtttacaactgttttccaacccaagagaagctctcaccaaagacactcaaccctaaagttacatcatctgatttaccaagtttctctct 41586322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 8040295 - 8040392
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||||||||||||||||||||||  |||||||||  | | ||||||| ||||||| |||||||||||||||||  ||  ||||||||||||||    
T  8040295 ccaaggtgtttacaatgtttcccaaccctcaagagaacttcactacaaagacactcaaccataaagttacctcctttgtattaccaagtttctctctc 8040392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 11067234 - 11067160
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 110  Q
    |||||||||  |||||||||||  |||||| |||||||||||||||||||||| | |||||||||||||| ||||    
T  11067234 caagagaaccttaatcaaagacaatcaaccataaagttacctcctttgatttccctagtttctctctcttgaagc 11067160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 31056274 - 31056371
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||||||||||||||||||||||  ||||||||   | | ||||||| ||||||||| |||||||||||||||  ||| ||||||||||||||    
T  31056274 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 31056371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 2837895 - 2837799
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctct 102  Q
    ||||||||||||||||||||||||||||  ||||||||   | | ||||||| |||||||||||||||||||||||||  |||| | ||||||||||    
T  2837895 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattcttaggtttctctct 2837799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 10445333 - 10445238
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctct 104  Q
    |||||||||||||||||||||||||||| |||||| |||    |||||||  ||||||||||||||||||||||||   ||| ||||||||||||||    
T  10445333 ccaaggtgtttacaatgtttcccaacccgagagaacctcactacaaagacattcaaccctaaagttacctcctttgtaatct-aagtttctctctct 10445238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 34682199 - 34682102
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    |||||||||||||||||||| ||||| |  ||||||||   | | ||||||| |||||||||||||||||||||||||  ||| ||||||||||||||    
T  34682199 ccaaggtgtttacaatgttttccaactctcaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattcccaagtttctctctc 34682102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 39483164 - 39483237
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctt 81  Q
    |||||||||||||||| |||||||||||||||||  |||  | ||||||| |||||||||||||||| ||||||    
T  39483164 ccaaggtgtttacaatatttcccaacccaagagatcctcacaacaaagacactcaaccctaaagttatctcctt 39483237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 42269605 - 42269697
Alignment:
Q  14 gtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    |||||||||||||||||||||||  ||||||||   | | ||||||| ||||||| |||||||||||||||||  ||| ||||||||||||||    
T  42269605 gtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccttaaagttacctcctttgtattcccaagtttctctctc 42269697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 6266667 - 6266537
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||| ||||| |||||||||||     
T  6266667 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctctcttcc 6266569  T
Q  108 agctctctttcaaaatctgca-aagaacactta 139  Q
      ||||| ||| ||||||||| |||||||||||    
T  6266568 cactctccttc-aaatctgcacaagaacactta 6266537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 36773540 - 36773496
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaac 44  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  36773540 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaac 36773496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 40739065 - 40739277
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||| |||| |||||||||   || ||||||  ||||||||||    
T  40739065 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatc-caagtt--tctctcttca 40739161  T
Q  108 agctct-ctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgta 204  Q
    | |||| ||   |||| ||||| ||||||||||| |||  |||||||| | |   ||||||||||||| |||  ||| ||||||||||||||||| ||||    
T  40739162 a-ctctactccaaaaaactgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgattt--ccaaatcgtgtcacgattgatacgta 40739258  T
Q  205 cgatccaaggtacgacctg 223  Q
    ||   ||||||||||||||    
T  40739259 cgtcacaaggtacgacctg 40739277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 11690285 - 11690248
Alignment:
Q  183 atcgtgtcacgattgatgcgtacgatccaaggtacgac 220  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11690285 atcgtgtcacgattgatgagtacgatccaaggtacgac 11690248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 5700321 - 5700417
Alignment:
Q  9 ccaaggtgtttacaa-tgtttcccaacccaa-gagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    |||| |||||||||| |||||| |||||||| ||||||  | || || || ||||||||||||||||||||||||| ||||| | | ||||||||||    
T  5700321 ccaaagtgtttacaaatgtttctcaacccaacgagaaccatcattaatgatcctcaaccctaaagttacctcctttaatttccccaatttctctctc 5700417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 221
Target Start/End: Original strand, 40015315 - 40015350
Alignment:
Q  186 gtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    |||||||||||||||| |||||||||||||||||||    
T  40015315 gtgtcacgattgatgcttacgatccaaggtacgacc 40015350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 35397783 - 35397837
Alignment:
Q  51 caaagaccctcaaccctaaagttacctcctttg-atttctcaagtttctctctct 104  Q
    |||||||  ||||||||||||| |||||||||| |||| ||||||||||||||||    
T  35397783 caaagacaatcaaccctaaagtgacctcctttgtatttttcaagtttctctctct 35397837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 39483235 - 39483320
Alignment:
Q  136 cttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    |||||||| ||||||||||| ||| |||| ||| ||||||| ||| | |||||| |||||||| |||||| || |||||||||||||    
T  39483235 cttatatagcagtcttcagctgtcaaaattgtgccacgtttgtccaa-atcgtgacacgattggtgcgtaagacccaaggtacgacc 39483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 13121697 - 13121628
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    ||||||||| ||| ||||||| | ||| ||||||| ||||||||||||||||   |||||||| ||||||    
T  13121697 caagagaaccctattcaaagatcatcagccctaaaattacctcctttgattttctaagtttctttctctt 13121628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 42362137 - 42362100
Alignment:
Q  183 atcgtgtcacgattgatgcgtacgatccaaggtacgac 220  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  42362137 atcgtgtcacgattgatgagtacgacccaaggtacgac 42362100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 6e-95; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 3206964 - 3206749
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3206964 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctct 3206865  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    ||||||| |||||| |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  3206864 ctcttcatgctctccttcaaaatcttcaaagaacacttatatagcaatcttcagcgtcgaaatcgtgtcacgtttttcccaaattgtgtcacgattgatg 3206765  T
Q  201 cgtacgatccaaggta 216  Q
    ||||||| ||||||||    
T  3206764 cgtacgacccaaggta 3206749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 20762649 - 20762429
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||||||||||    
T  20762649 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctct 20762550  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||  |||||| |||||||||||    
T  20762549 ctcttcaagctctctttcaaaatctgcaaagaacacttatatagctgtcttctgcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatg 20762450  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    ||| ||||| |||||||||||    
T  20762449 cgttcgatcaaaggtacgacc 20762429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 13316513 - 13316729
Alignment:
Q  5 ctcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctct 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |  ||||||||||| |||||||||||||||    
T  13316513 ctcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgctacctttgatttcccaagtttctctctct 13316612  T
Q  105 tcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgta 204  Q
    ||||||||   |||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||   ||||| |||||||||||||||    
T  13316613 tcaagctcatcttcaaaatctgcaaagaacacttatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccactcgtgccacgattgatgcgta 13316712  T
Q  205 cgatccaaggtacgacc 221  Q
    |||||||||||||||||    
T  13316713 cgatccaaggtacgacc 13316729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 10925201 - 10924980
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  10925201 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactataatcaaagaccctcaaccctaaagttacctcctttgattttccaagtttctc 10925102  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| ||| |||||| |||| ||||    
T  10925101 tctcttcaagctctccttcaaaatctgcaaagaacacttatataacagtcttcagctgtcaaaatcgtgtcacg-ttttgccaaatcgtgacacggttga 10925003  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    |||||| || |||||||| ||||    
T  10925002 tgcgtatgacccaaggtatgacc 10924980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 28220416 - 28220637
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28220416 ttcactcacccaaggtgttttcaatgcttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 28220515  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||||| |||||| |||| ||      
T  28220516 tctcttcaagctcaccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgttttg 28220614  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||||    
T  28220615 tgcgtacgacccaaggtacgacc 28220637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 28223611 - 28223832
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28223611 ttcactcacccaaggtgtcttcaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 28223710  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||||||| | |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||||| || ||| |||| ||      
T  28223711 tctcttcaagctcaccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaattgtgacacgttttg 28223809  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||||    
T  28223810 tgcgtacgacccaaggtacgacc 28223832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 31659216 - 31658999
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31659216 ttcactcacccaaggtgtttacaatgtttccgaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 31659117  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||  |||| ||| |||||| |||| |||     
T  31659116 tctcttcaagctctctctcaaaatctgcaaagaacacttatatagcagtcttcaactgtcaaaatcgtgtcac-attttaccaaatcgtgacacgtttgg 31659018  T
Q  199 tgcgtacgatccaaggtac 217  Q
    ||||||||| |||||||||    
T  31659017 tgcgtacgacccaaggtac 31658999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 3156843 - 3156667
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3156843 ttcactcaccagggtgtttacaatgtttccaaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctct 3156744  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttt 176  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||| |||| |||||||    
T  3156743 ctcttccagctctccttcaaaatctgcaaagaacacttatataacagtcttcagctgtcaaaattgtgttacgtttt 3156667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 3189308 - 3189137
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3189308 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctct 3189209  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacg 172  Q
    ||||||| |||||| |||||||||| ||||||||||||||||| || ||||||||||| |||| ||||||||    
T  3189208 ctcttcatgctctccttcaaaatcttcaaagaacacttatatagcaatcttcagcgtccaaattgtgtcacg 3189137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 3198125 - 3197954
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3198125 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctct 3198026  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacg 172  Q
    ||||||| |||||| |||||||||| ||||||||||||||||| || ||||||||||| |||| ||||||||    
T  3198025 ctcttcatgctctccttcaaaatcttcaaagaacacttatatagcaatcttcagcgtccaaattgtgtcacg 3197954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 49918328 - 49918106
Alignment:
Q  1 ttcactcacc-aaggtgttt-acaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||||| ||||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  49918328 ttcactcacccaaggtgttttataatgtttcccaatccaagagaactctaatcaaagaccttcaaccctaaagttacctcctttgatttcccaagtttct 49918229  T
Q  99 ctctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattg 197  Q
    |||||||||||||||  |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||  |||||||| |||||| ||||||||    
T  49918228 ctctcttcaagctctacttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcac-attttcccaaatcgtgacacgattg 49918130  T
Q  198 atgcgtacgatccaaggtacgacc 221  Q
     || |||||| |||||||| ||||    
T  49918129 gtgtgtacgacccaaggtatgacc 49918106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 215
Target Start/End: Original strand, 30476647 - 30476853
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||  |||| || ||||||||| |||||||||||||||||||    
T  30476647 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaataccctcagccctaacattacatcatttgatttcccaagtttctctctcttcaa 30476746  T
Q  109 gctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacga 207  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||||| |||||| |||| ||| || ||||||    
T  30476747 gctctccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttggtgtgtacga 30476845  T
Q  208 tccaaggt 215  Q
     |||||||    
T  30476846 cccaaggt 30476853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 1833500 - 1833279
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  1833500 ttcactcacccaaggtgtttacaatgtttcccaatccaagagaactctaatcaaagaccctcaaccttaaagttatctcctttgatttcccaagtttctc 1833401  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||| ||||| |||||||||||||||||| |||||||||  |||||||||| ||| ||||||||||||| ||||| || |||||| |||| |||     
T  1833400 tctcttcaatctctcattcaaaatctgcaaagaatacttatataggagtcttcagctgtcaaaatcgtgtcacg-ttttcgcaaatcgtgacacgtttgg 1833302  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||| | |||||||| ||||    
T  1833301 tgcgtacaacccaaggtatgacc 1833279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 37503744 - 37503942
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  37503744 ttcactcacccaaggtgtttacaatattttccaacccaatagaactctaatcaaagaccctcaaccctaaagtcacctcctttgatttcccaagtttctc 37503843  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||  ||||||||||||| ||||| ||  |||||||||||||||    
T  37503844 tctcttcaacctctccttcaaaatctgcaaagaacacttatatatcagtcttcagctgtaaaaatcgtgtcacg-ttttctcaagtcgtgtcacgattga 37503942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 37560059 - 37560200
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  37560059 ttcactcacctaatgtgtttacaatgttttcaaacccaagagaactctaatcaaagaccctcaaccttaaagttacctcatttgatttctcaagtttctc 37560158  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttata 141  Q
    |||||||||||| |  ||||||||||||||||||||||||||    
T  37560159 tctcttcaagctttacttcaaaatctgcaaagaacacttata 37560200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 44455138 - 44454998
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  44455138 ttcactcacccaaggtgtttacaatgtttcccaacccaagaaaactctaatcaaagaccctcaaccctaaagttacctcctttgatttaccaagtttctc 44455039  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacactta 139  Q
    ||||| ||| ||||| ||||||||||||| |||||||||||    
T  44455038 tctctacaacctctccttcaaaatctgcacaagaacactta 44454998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 3281938 - 3282150
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| ||||||| |||||||||||| ||||   || |||||||||||| |||||    
T  3281938 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccataaagttacctcatttgtaatc-caagtttctctcacttca 3282036  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||||||  || |||||| |||||||| |||||||    
T  3282037 agctctccttcaaaatctgcataagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttt--caaatcgtggcacgattggtgcgtac 3282134  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||| ||||    
T  3282135 gacccaaggtatgacc 3282150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 21536436 - 21536224
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||| |||||| |||||| |   | | ||||||| |||||||||||||||||||||||||   || |||||||||||| |||||    
T  21536436 ccaaggtgtttacaatgttttccaacctaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctcacttca 21536338  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||||  ||| |||| | |||||||| |||||||    
T  21536337 agctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaatcggggcacgattggtgcgtac 21536240  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  21536239 gacccaaggtacgacc 21536224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 13598631 - 13598844
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||| ||||||||||||| |   | | ||||||| ||||||| |||||||||||||||||   || ||| ||||||||||||||    
T  13598631 ccaaggtgtttacaatgtttgccaacccaagagatcctcactacaaagacactcaaccataaagttacctcctttgtaatc-caattttctctctcttca 13598729  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||| ||||||| ||||||||||| ||| |||||||||||||||| | ||| || ||| |||||||| |||||||    
T  13598730 agctctccttcaaaatctgcacaagaacatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ccaaattgtgacacgattggtgcgtac 13598828  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  13598829 gacccaaggtacgacc 13598844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 29652044 - 29652257
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||| ||| |   | | ||||||| |||||||||||||||||||||||||   || ||||||||||||| ||||    
T  29652044 ccaaggtgtttacaatgtttcccaacccaaaagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctcttttca 29652142  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| || |||||||||||| ||||||||||| ||| ||||| |||||||||| | ||| |||||| |||||||| || ||||    
T  29652143 agctctccttcaaaatctgcacaaaaacacttatatagcagtcttcagctgtcaaaatcatgtcacgtttgt-ccaaatcgtgacacgattggtgtgtac 29652241  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  29652242 gacccaaggtacgacc 29652257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 197098 - 197232
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||  |    
T  197098 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagttttcc 197197  T
Q  100 tctcttcaagctctctttc-aaaatctgcaaagaa 133  Q
    |||||| ||| ||||  || |||||||||||||||    
T  197198 tctcttgaagttctcactcaaaaatctgcaaagaa 197232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 15820285 - 15820163
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||    
T  15820285 ttcactcacccaaggtgtttacaatgtttcccaactcaagagaactctaatcaaagaccctcaaccctaaagttacctcttttgatttcccaagtttttc 15820186  T
Q  100 tctcttcaagctctctttcaaaa 122  Q
    |||||| |||| |||| ||||||    
T  15820185 tctcttgaagccctctctcaaaa 15820163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13138164 - 13138277
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  13138164 ttcactcacccaaggtgtttacaatgtttcccaccccaagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttc 13138263  T
Q  100 tctcttcaagctct 113  Q
    |||||| |||||||    
T  13138264 tctcttgaagctct 13138277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 23555464 - 23555577
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||| ||||||| |||||||| ||    
T  23555464 ccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagatcctcaaccctgaagttacctcctttgatttcccaagtttttctctcttgaa 23555563  T
Q  109 gctctctttcaaaa 122  Q
    ||||||| ||||||    
T  23555564 gctctctctcaaaa 23555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3847311 - 3847426
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||  |    
T  3847311 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcgaccctaaagttacctcctttgatttcccaagttttcc 3847410  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  3847411 tctcttgaagttctct 3847426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 4552836 - 4553045
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||||| ||||||||||||||   ||| ||||||||||||||||||||||||||||||| ||||| ||||||   ||||||| ||    
T  4552836 ccaaggtgtttacaatgtttctcaacccaagagaacctcaattaaagaccctcaaccctaaagttacctcctttaatttcccaagttctcctctcttgaa 4552935  T
Q  109 gctctct----------ttcaaaatctgcaaag-aacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgatt 196  Q
    |||||||          |||||||||||||||| |||||||||||||||||||||||| ||| ||| ||||||||| |||| ||| |||||| |||| ||    
T  4552936 gctctcttgaaccacccttcaaaatctgcaaagaaacacttatataacagtcttcagctgtcaaaaacgtgtcacg-ttttgccaaatcgtgacacggtt 4553034  T
Q  197 gatgcgtacga 207  Q
    |||||||||||    
T  4553035 gatgcgtacga 4553045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 37069998 - 37070211
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| ||||||| |||||||||||||||||   || |||||||||||||||||     
T  37069998 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccataaagttacctcctttgtaatc-caagtttctctctcttcc 37070096  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||  ||||||||||||| ||||||||||||||| ||||||| ||| ||| ||||  ||||||| |||| ||| |||||| |||||||| |||||||    
T  37070097 agctctacttcaaaatctgcacaagaacacttatatagcagtctttagctgtcaaaattatgtcacgatttt-ccaaatcgtggcacgattggtgcgtac 37070195  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  37070196 gacccaaggtacgacc 37070211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 13604488 - 13604276
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||  ||||||||||||||| |||||||||   || |||||||||||||||| |    
T  13604488 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagatactcaaccctaaagttccctcctttgtaatc-caagtttctctctcttta 13604390  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| | |||||| |||| ||||||||||||||| ||||||||||| |   |||||||| ||||||||  ||| ||||||||||||||||| |||||    
T  13604389 agctctcctccaaaatttgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcgtgtcacgattgatacgtac 13604292  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  13604291 gacccaaggtacgacc 13604276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 96
Target Start/End: Original strand, 834366 - 834453
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 96  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  834366 ccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 834453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 46064896 - 46064675
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||  ||||||||||||||||||  ||||||||||| |||||||||| ||||||| ||    
T  46064896 ttcactcacccaaggtgtttacaatgttttccaccccaagagaaccataatcaaagaccctcaacaataaagttaccttctttgatttcccaagtttttc 46064797  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattg 197  Q
    |||||| |||||||| || ||||| || |   ||||||||| ||||||||||||||| ||| |||||||| || |  ||  ||| ||||||||||| |||    
T  46064796 tctcttgaagctctccttaaaaat-tgaattggaacacttaaataacagtcttcagctgtcaaaatcgtgacatg-attggccaaatcgtgtcacggttg 46064699  T
Q  198 atgcgtacgatccaaggtacgacc 221  Q
    || ||||||| |||||||||||||    
T  46064698 atacgtacgacccaaggtacgacc 46064675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 50169400 - 50169513
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||| | ||||||||    
T  50169400 ttcactcacccaaggtatttacaatgtttcccaacccaagataaccctaataaaaaaccctcaaccctaaagttacctcctttgatttccctagtttctc 50169499  T
Q  100 tctcttcaagctct 113  Q
    |||||| |||||||    
T  50169500 tctcttgaagctct 50169513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 207
Target Start/End: Complemental strand, 26644763 - 26644565
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||||||||||||| ||| ||  | | ||||||| |||||||||||| ||| ||||||||   || ||||||||||||||||||     
T  26644763 caaggtgtttacaatgtttcccaacccaaaagatcttcactacaaagacactcaaccctaaaattatctcctttgtaatc-caagtttctctctcttcag 26644665  T
Q  109 gctct-ctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||||||||| |   |||||||| ||||||||  ||| |||||| |||||||| |||||||    
T  26644664 gctctcctttcaaaatctgcataagaacacttatatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcgtgccacgattggtgcgtac 26644567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 139
Target Start/End: Complemental strand, 51765370 - 51765234
Alignment:
Q  3 cactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 101  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||  ||||||||||| |||||||||| |    
T  51765370 cactcaccaaggtgtttacaatgtttcc-aacccaagagaagctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagtttctcac 51765272  T
Q  102 tcttcaagctctctttcaaaatctgca-aagaacactta 139  Q
    ||||| | ||| | ||||||||||||| |||||||||||    
T  51765271 tcttccaactc-ccttcaaaatctgcacaagaacactta 51765234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 45644545 - 45644658
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||| |||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| | ||||| ||    
T  45644545 ttcactcacccaagatgtttacaatgttttccaacctaagagaaccctaatcaaagaccctcaaccctaaagttatctcctttgatttccctagtttttc 45644644  T
Q  100 tctcttcaagctct 113  Q
    |||||| |||||||    
T  45644645 tctcttgaagctct 45644658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 47098691 - 47098556
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||||| ||    ||||||| |||||||||||||||||||||||||   || |||||||||||||||  |    
T  47098691 ccaaggtgtttacaatgtttcccaacccaagagaacctcgctacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctctaaa 47098593  T
Q  108 agctctctttcaaaatctgcaaag-aacacttatata 143  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  47098592 agctctcattcaaaatctgcaaagaaacacttatata 47098556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 47102705 - 47102570
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||||||||||||||   | | ||||||| |||||||||||||||||||||||||   || |||||||||||||||  |    
T  47102705 ccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctctaaa 47102607  T
Q  108 agctctctttcaaaatctgcaaag-aacacttatata 143  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  47102606 agctctcattcaaaatctgcaaagaaacacttatata 47102570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 8550977 - 8551092
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| || ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||  |    
T  8550977 ttcactcacccaatgtgtttacaatgtttcttaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcc 8551076  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  8551077 tctcttgaagttctct 8551092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 13659535 - 13659642
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||    |||||| ||    
T  13659535 ccaaggtgtttacaatgtttctcaacctaagagaactctaatcaaagaccctcaacccacaagttacctcctttgatttcccaagttgtcatctcttgaa 13659634  T
Q  109 gctctctt 116  Q
    ||||||||    
T  13659635 gctctctt 13659642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 40122397 - 40122503
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||||||||| |||||| ||||||||| || || |||||||| |||||||||||||||||||||| ||||||| |||||||| ||    
T  40122397 ccaaggtgtttacaatgtttcccaatccaagataactctaattaatgatcctcaaccataaagttacctcctttgatttcccaagtttttctctcttgaa 40122496  T
Q  109 gctctct 115  Q
     ||||||    
T  40122497 cctctct 40122503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 928167 - 928264
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 96  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||||||| |||||||    
T  928167 ttcactcacccaaggtgtttacaaatgtttcccaacccaagagaatcctaatcaaagaccttcaaccataaagttacctcctttgatttcccaagttt 928264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 50167414 - 50167491
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  50167414 caagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 50167491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 777172 - 777095
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  777172 caagagaaccctaatcaaagaccatcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 777095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 28265793 - 28265869
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  28265793 caagagaac-ctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 28265869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 47703801 - 47703704
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||||||||||||||||||||||  ||||||||   | | ||||||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  47703801 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattctcaagtttctctctc 47703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 133
Target Start/End: Complemental strand, 27104267 - 27104143
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||| ||| ||||||||||||||||||||| |||    ||||||| ||||||| |||||||||||||||||   || |||||||||||||||  ||    
T  27104267 ccaaggtgcttataatgtttcccaacccaagagacctcactacaaagacactcaaccttaaagttacctcctttgtaatc-caagtttctctctctaaaa 27104169  T
Q  109 gctctctttc-aaaatctgcaaagaa 133  Q
    ||||||| || |||||||||||||||    
T  27104168 gctctctctcaaaaatctgcaaagaa 27104143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 32889669 - 32889804
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||| | |||   | | ||||||| |||||||||||||||||||||||||   || |||||||||||||||  |    
T  32889669 ccaaggtgtttacaatgtttcccaacccaaaaaaacctcactacaaagacactcaaccctaaagttacctcctttgcaatc-caagtttctctctctaaa 32889767  T
Q  108 agctctctttcaaaatctgcaaag-aacacttatata 143  Q
    | ||||  |||||||| ||||||| ||||||||||||    
T  32889768 atctctacttcaaaatatgcaaagaaacacttatata 32889804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 40282353 - 40282222
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||| |||||||||||||||||     
T  40282353 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttcc 40282255  T
Q  108 agctctctttcaaaatctgca-aagaacactta 139  Q
    | |||||| |  ||||||||| |||||||||||    
T  40282254 aactctctcttcaaatctgcacaagaacactta 40282222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 19073159 - 19073256
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||||||||||||||||||||||  ||||||||   | | ||||||| ||||||||| |||||||||||||||  ||| ||||||||||||||    
T  19073159 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 19073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 19121049 - 19121146
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||||||||||||||||||||||  ||||||||   | | ||||||| ||||||||| |||||||||||||||  ||| ||||||||||||||    
T  19121049 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 19121146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 40816682 - 40816585
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||||||||||||||||||||||  ||||||||   | | ||||||| ||||||||| |||||||||||||||  ||| ||||||||||||||    
T  40816682 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 40816585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 2263176 - 2263273
Alignment:
Q  8 accaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctct 104  Q
    |||||| ||||||||| | ||||| ||| ||||||||| || | ||||||| |||||||||||| |||||||| |||| |||||| ||||||||||||    
T  2263176 accaagatgtttacaaatatttcctaactcaagagaaccctcaccaaagacactcaaccctaaaattacctcccttgacttctcatgtttctctctct 2263273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 9022770 - 9022655
Alignment:
Q  11 aaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaag 109  Q
    ||||||||||||||||||| ||||||||||||||   | | |||||||  ||||||  |||| |||||||||||    | ||||||||||||||||||||    
T  9022770 aaggtgtttacaatgtttctcaacccaagagaacctcactacaaagacattcaacca-aaagatacctcctttgtaaacccaagtttctctctcttcaag 9022672  T
Q  110 ctctctttcaaaatctg 126  Q
    ||||| |||||||||||    
T  9022671 ctctccttcaaaatctg 9022655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 123
Target Start/End: Original strand, 22819662 - 22819775
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||||||||||||| |||    ||||||| || || |||||||||||||||||||    | ||||||  ||||||||||    
T  22819662 ccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactaaatcctaaagttacctcctttgtaaacccaagtt--tctctcttca 22819759  T
Q  108 agctctctttcaaaat 123  Q
    | ||||| ||||||||    
T  22819760 aactctccttcaaaat 22819775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 110
Target Start/End: Original strand, 43342468 - 43342556
Alignment:
Q  22 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 110  Q
    |||||||||||||| ||||||||||| | |||||||||||| ||| |||||||| ||||||  ||||  || |||||||||||| ||||    
T  43342468 aatgtttcccaaccgaagagaactctcaccaaagaccctcatcccaaaagttacatcctttagtttcctaactttctctctcttgaagc 43342556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 9036393 - 9036208
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctc-ttc 106  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||||| ||||| |||||||| |||    
T  9036393 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgatttcccaagtctctctctctttc 9036296  T
Q  107 aagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgat 195  Q
    || ||| || |  ||||||||| |||||||||| ||||  |||||||  | || |||||||||||||| |||||||| |||||||||||||    
T  9036295 aaactc-ctcttcaaatctgcacaagaacactt-tatactagtcttcctctgttgaaatcgtgtcacgattttccca-atcgtgtcacgat 9036208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 16455580 - 16455532
Alignment:
Q  44 ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaa 92  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||||||||    
T  16455580 ctctattcaaagaccctcaactctaaagatacctcctttgatttctcaa 16455532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 21053934 - 21053803
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||| ||||| |||||||||||     
T  21053934 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctctcttcc 21053836  T
Q  108 agctctctttcaaaatctgca-aagaacactta 139  Q
    | |||||  |  ||||||||| |||||||||||    
T  21053835 aactctcacttcaaatctgcacaagaacactta 21053803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 24202633 - 24202536
Alignment:
Q  9 ccaaggtgtttacaatgttt--cccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctct 104  Q
    |||||||| |||||||||||  |||||||||||||| |||||   ||||||| ||||||||||||||| |||||||||   || |||||||||||||||    
T  24202633 ccaaggtgattacaatgtttttcccaacccaagagacactctctacaaagacactcaaccctaaagttccctcctttgtaatc-caagtttctctctct 24202536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 25116520 - 25116465
Alignment:
Q  52 aaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||| |||||| |||||||| |||| |||||||| |||||||||||||||||||    
T  25116520 aaagacactcaactctaaagttccctcgtttgatttttcaagtttctctctcttca 25116465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 8871310 - 8871363
Alignment:
Q  60 tcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    |||||||||||||||||| ||||||| || | |||||||||||||| |||||||    
T  8871310 tcaaccctaaagttacctgctttgatatccctagtttctctctcttgaagctct 8871363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 16124380 - 16124347
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagaga 42  Q
    ||||||||||||||||||||||||||||||||||    
T  16124380 ccaaggtgtttacaatgtttcccaacccaagaga 16124347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 777221 - 777177
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaac 44  Q
    |||||||||| || |||||||||||||||||||||||||||||||    
T  777221 ttcactcacccaaagtgtttacaatgtttcccaacccaagagaac 777177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 9987178 - 9987048
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||| ||||| | |||||||||     
T  9987178 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctatctctcttcc 9987080  T
Q  108 agctctctttcaaaatctgca-aagaacactta 139  Q
    | ||| | ||| ||||||||| |||||||||||    
T  9987079 aactcaccttc-aaatctgcacaagaacactta 9987048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28265744 - 28265788
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaac 44  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||    
T  28265744 ttcactcacccaaggtgtttacaatgtttcccaacctaagagaac 28265788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 112
Target Start/End: Complemental strand, 11031306 - 11031268
Alignment:
Q  74 acctcctttgatttctcaagtttctctctcttcaagctc 112  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  11031306 acctcttttgatttctcaagtttctctctcttaaagctc 11031268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 8281549 - 8281641
Alignment:
Q  9 ccaaggtgtttacaa-tgtttcccaacccaagagaa--ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    ||||||||||||||| || |||||||| ||||| ||  |||| ||||||||  | |||||||||||||  ||||||||||||  |||||||||    
T  8281549 ccaaggtgtttacaaatggttcccaacacaagaaaaaactctcatcaaagatgcccaaccctaaagttctctcctttgattttccaagtttct 8281641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 44650353 - 44650454
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||||| || |||||||||| ||||| |||||  |||||||| || | ||||||| |||| ||||||| ||  ||||||||||||| ||||| |||    
T  44650353 ttcactcacccaaagtgtttacaaatgttttccaacttaagagaaccctcaccaaagactctcatccctaaaattttctcctttgatttcccaagtctct 44650452  T
Q  99 ct 100  Q
    ||    
T  44650453 ct 44650454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Complemental strand, 16455441 - 16455405
Alignment:
Q  183 atcgtgtcacgattgatgcgtacgatccaaggtacga 219  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  16455441 atcgtgtcacggttgatgcgtacgacccaaggtacga 16455405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 173; Significance: 4e-93; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 17982630 - 17982410
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||||||||||    
T  17982630 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctct 17982531  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||||||  |||||| |||||||||||    
T  17982530 ctcttcaagctctccttcaaaatctgcaaagaacacttatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatg 17982431  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||||||||||||||||||||    
T  17982430 cgtacgatccaaggtacgacc 17982410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 34254520 - 34254739
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  34254520 ttcactcaccaaggtgtttacaatgtctcc-aacccaagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctct 34254618  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  34254619 ctcttcaagctctccttcaaaatctgcaaagaacacttatatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatg 34254718  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    ||||||| |||||||||||||    
T  34254719 cgtacgacccaaggtacgacc 34254739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 44303831 - 44303611
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||    
T  44303831 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgtttcctttgatttctcaagtttctct 44303732  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||||| |||||||  |||||| ||| |||||||    
T  44303731 ctcttcaagctctctttcaaaatctgcaaagaacacttatatagctgtcttctgcgtcgaaatcgtgtcacgattttccccaatcgtgccacaattgatg 44303632  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||| ||||||||||||||||    
T  44303631 cgtatgatccaaggtacgacc 44303611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 43036401 - 43036182
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43036401 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 43036302  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| |||||| |||| |||     
T  43036301 tctcttcaacctctcattcaaaatctgcaaagaacacttatataacagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttgg 43036203  T
Q  199 tgcgtacgatccaaggtacga 219  Q
    |||||||||||||||||||||    
T  43036202 tgcgtacgatccaaggtacga 43036182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 31218234 - 31218014
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||||||||||    
T  31218234 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctct 31218135  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||||  |||||||||| ||||||||||||||||| | |||||| ||||| |||||||||||||||||| ||  ||||||||||||||||||    
T  31218134 ctcttcaagctcttcttcaaaatctacaaagaacacttatatagctgtcttctgcgtcaaaatcgtgtcacgttttttcccaatcgtgtcacgattgatg 31218035  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||| ||||||||||||||||    
T  31218034 cgtatgatccaaggtacgacc 31218014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 12702829 - 12703050
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  12702829 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaatttacctcctttgatttcccaagtttctct 12702928  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgat 199  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||| |||||| | ||| |||||||||||||||||||||| |||||| ||||  || |    
T  12702929 ctcttcaagctctccttcaaaatatgcaaagaacacttacataacaatcttcaactgtcaaaatcgtgtcacgtttttcccaaatcgtgacacgtatggt 12703028  T
Q  200 gcgtacgatccaaggtacgacc 221  Q
    |||||||| |||| ||||||||    
T  12703029 gcgtacgacccaatgtacgacc 12703050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 1746409 - 1746629
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| | |||||||||||| |||||||||||    
T  1746409 ttcactcaccaaggtgtttacaatgtttcccaaccaaagagaactctaatcaaggaccctaaaccctaaagttgcttcctttgatttcccaagtttctct 1746508  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||| ||||||  ||||||||||||||||||||||||||||   |||||| ||||| |||||||||||||||||||||  |||||| |||||||||||    
T  1746509 ctcttccagctcttcttcaaaatctgcaaagaacacttatatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatg 1746608  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||||||||||||||||||||    
T  1746609 cgtacgatccaaggtacgacc 1746629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 34256696 - 34256911
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| |||    
T  34256696 ttcacacaccaaggtgtttacaatgtttcc-aacccaagataactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttatct 34256794  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
     ||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  34256795 ttcttcaagctctccttcaaaatctgcaaagaacacttatatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatg 34256894  T
Q  201 cgtacgatccaaggtac 217  Q
    ||||||| |||||||||    
T  34256895 cgtacgacccaaggtac 34256911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 42498171 - 42498000
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  42498171 ttcactcaccaaggtgtttacaacgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctct 42498072  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacg 172  Q
    |||||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  42498071 ctcttcaagctctccttcaaaatctgcaaagaacagttatatagcagtcttcagcgtcgaaatcatgtcacg 42498000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 15212764 - 15212543
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  15212764 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcatttgatttcccaagtttctc 15212665  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| |||  |||||||||||  |||||| | |||||| |||| |||     
T  15212664 tctcttcaagctctccttcaaaatctgtaaagaacacttatatagcagtcttcagctgtcacaatcgtgtcac-attttcctaaatcgtgacacgtttgg 15212566  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||||    
T  15212565 tgcgtacgacccaaggtacgacc 15212543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 30143320 - 30143099
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30143320 ttcactcacccaatgtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 30143221  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||  ||| ||||||||||||| |||| ||| |||||| |||| |||     
T  30143220 tctcttcaagctctccttcaaaatctacaaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcacg-ttttgccaaatcgtgacacggttgg 30143122  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||| ||||||||    
T  30143121 tgcgtacgacccaaagtacgacc 30143099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 19948533 - 19948732
Alignment:
Q  22 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaa 121  Q
    ||||||||||||| ||| |||||||||||||||||| || |||||||||||| | |||||||||||| ||||||||||||||||||||||||| ||||||    
T  19948533 aatgtttcccaactcaaaagaactctaatcaaagactctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagctctccttcaaa 19948632  T
Q  122 atctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||||||||||||||||||||   |||||| ||||| |||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||    
T  19948633 atctgcaaagaacacttatatagttgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgatccaaggtacgacc 19948732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 33352119 - 33351907
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |    
T  33352119 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttaccttctttgatttcccaagtttctctctcttcca 33352020  T
Q  109 gctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacga 207  Q
     ||| | |||||||| ||||||||| ||||||||| ||||||||||| ||| ||||||||||||| |||||||| ||| || |||| ||| |||||| ||    
T  33352019 cctcaccttcaaaatttgcaaagaaaacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcatgacacgtttggtgcgtatga 33351921  T
Q  208 tccaaggtacgacc 221  Q
     |||||||||||||    
T  33351920 cccaaggtacgacc 33351907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4731636 - 4731415
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4731636 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttttcaagtttctc 4731537  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||| | ||| |||||||||| |||||||||||||||||  ||||||||||  || ||||||||||||| |||| ||| |||||| |||  |||     
T  4731536 tctcttcaaccgctccttcaaaatctacaaagaacacttatatagtagtcttcagctatcaaaatcgtgtcacg-ttttgccaaatcgtgacacagttgg 4731438  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||| ||||  |||||||||||||    
T  4731437 tgcctacggcccaaggtacgacc 4731415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 19945551 - 19945722
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||| | |||||||||||| ||||||| |||    
T  19945551 ttcactcaccaaggtgtttacaatgtttcccgacccaagagaactctaatcaaagactctaaaccctaaagttgcttcctttgatttcccaagtttgtct 19945650  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacg 172  Q
    |||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||| |||||||| ||||    
T  19945651 ctcttcaagctctccttcaaaatctgcaaagaacacttatatagctgtcttctgcgtcaaaatcgtgccacg 19945722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 27811256 - 27811080
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  27811256 ttcactcacccaaggtgtttacaatgttttccaacctaagagaactctaatcaaagaccctcaaccctaaatttacctcctttgatttcccaattttctc 27811157  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgttt 175  Q
    ||||||| |||| || |||||||| ||||||||||||||||||| ||||||||||| ||| |||||||| |||||||    
T  27811156 tctcttccagctttccttcaaaatatgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgacacgttt 27811080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 4733778 - 4733630
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct--ctcttc 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||  ||||||    
T  4733778 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcttttgatttcccaagtttctctctctcttc 4733679  T
Q  107 aagctctctttcaaaatctgc--aaagaacacttatataacagtcttca 153  Q
    || ||||| ||||||||||||  ||||||||||||||||  ||||||||    
T  4733678 aacctctccttcaaaatctgcaaaaagaacacttatatagtagtcttca 4733630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 5702346 - 5702133
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||| ||||||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   || ||||||||||||||||||    
T  5702346 ccaaggtgtttacaatatttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttca 5702248  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    | ||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||| |||| |||| ||| |||||| |||||||| |||||||    
T  5702247 acctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgacacg-ttttgccaaatcgtgacacgattggtgcgtac 5702149  T
Q  206 gatccaaggtacgacc 221  Q
     |||||||||||||||    
T  5702148 aatccaaggtacgacc 5702133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 23799441 - 23799229
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||||||||||| |||||||||||||| | |||   ||||||| |||||||||||||||||||||||||   || |||||||||||||||||||    
T  23799441 caaggtgtttacaatgttccccaacccaagagatcctctctacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttcaa 23799343  T
Q  109 gctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacg 206  Q
    ||| || |||||||| |||| ||||||||||||||| ||||||||||| ||| |||||||||||||||| | ||| |||||| ||| |||| ||||||||    
T  23799342 gctatccttcaaaatatgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacaattggtgcgtacg 23799244  T
Q  207 atccaaggtacgacc 221  Q
    | |||| ||||||||    
T  23799243 acccaacgtacgacc 23799229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 7412571 - 7412769
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| | |||   ||||||| |||||||||||||||||||||||||   || ||||||||||||||||||    
T  7412571 ccaaggtgtttacaatgtttcccaacccaagagatcctctctacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttca 7412669  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||| |   |||||||| ||||||||  ||| |||||| || ||||||| |||||    
T  7412670 agctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcgtgccatgattgatacgtac 7412767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 6598950 - 6598835
Alignment:
Q  1 ttcactcac-caaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |    
T  6598950 ttcactcactcaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagttttcc 6598851  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  6598850 tctcttgaagttctct 6598835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 6674403 - 6674288
Alignment:
Q  1 ttcactcac-caaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||  |    
T  6674403 ttcactcactcaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagttttcc 6674304  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  6674303 tctcttgaagttctct 6674288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 3303860 - 3303965
Alignment:
Q  1 ttcactcac-caaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||| ||    
T  3303860 ttcactcactcaaggtgtttacaatgtttcccaacccaagagaaccctaatcaaagaccctcaaccgtaaagttacctcctttgatttcccaagtttttc 3303959  T
Q  100 tctctt 105  Q
    ||||||    
T  3303960 tctctt 3303965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 4696474 - 4696306
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||| ||||||||   || ||||||||||||||||||    
T  4696474 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttatctcctttgtaatc-caagtttctctctcttca 4696376  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgttt 175  Q
    ||||||| ||||||||||||| |||||| |||||||||| ||||||||| ||| ||||||||||||||||    
T  4696375 agctctccttcaaaatctgcacaagaacccttatataacggtcttcagctgtcaaaatcgtgtcacgttt 4696306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 41365037 - 41365152
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||  |    
T  41365037 ttcactcacccaaggtgtttacaatgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaaagttacctcatttgatttcacaagttttcc 41365136  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  41365137 tctcttgaagttctct 41365152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 5689249 - 5689136
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| | ||||||||    
T  5689249 ttcactcacccaaggtgtttacaatgtttccaaactcaagagaaccctaatcaaagaccctcaaccctaaagttatctcctttgatttccctagtttctc 5689150  T
Q  100 tctcttcaagctct 113  Q
    |||||| |||||||    
T  5689149 tctcttgaagctct 5689136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 122
Target Start/End: Complemental strand, 10929768 - 10929657
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||  ||||||| ||    
T  10929768 ccaaggtgtttacaatgtt-cccaacccaagagaactctaatcaaagaccc-caaccctaaagttacctcctttgatttcccaagttttcctctcttgaa 10929671  T
Q  109 gctctctttcaaaa 122  Q
    ||||| | ||||||    
T  10929670 gctctttgtcaaaa 10929657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 96
Target Start/End: Complemental strand, 10015117 - 10015030
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 96  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  10015117 ccaacgtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 10015030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1292653 - 1292767
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||  |    
T  1292653 ttcactcacccaaggtgttcacagtgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaaagttacctcatttgattttccaagttttcc 1292752  T
Q  100 tctcttcaagctctc 114  Q
    |||||| ||||||||    
T  1292753 tctcttgaagctctc 1292767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 167
Target Start/End: Original strand, 4456259 - 4456419
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | || |||| |||||||||||||||||||||||||   || ||||||||||||||||||    
T  4456259 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacagagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttca 4456357  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtg 167  Q
    ||||||  ||||||||||||| ||||||||||||||| | ||||||||| ||| ||||||||    
T  4456358 agctcttcttcaaaatctgcacaagaacacttatatagccgtcttcagctgtcaaaatcgtg 4456419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 3051351 - 3051565
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||| |||||||||||||||||||| ||||||||| | | | ||||||| |||||||||||||||  |||||||    || ||||||||||||||||||    
T  3051351 ccaagatgtttacaatgtttcccaactcaagagaaccccactacaaagacactcaaccctaaagttctctcctttatagtcccaagtttctctctcttca 3051450  T
Q  108 agctctctttcaaaatctgcaaag-aacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||||||||||||||||| || ||||||||||||  | ||| ||||  || |||| ||||||||  || || |  |||||||||||||||||| |||    
T  3051451 agctctctttcaaaatctgcatagaaacacttatatagtactctgcagctatcaaaattgtgtcacg-attgccaaattcgtgtcacgattgatgcatac 3051549  T
Q  206 gatccaaggtacgacc 221  Q
    || |||| ||||||||    
T  3051550 gacccaatgtacgacc 3051565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 96
Target Start/End: Complemental strand, 4162468 - 4162382
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 96  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||| ||||||    
T  4162468 caaggtgtttacaatgttttccaacccaagagaaccctaatcaaagaccctcaaccctaaagttacctcttttaatttcttaagttt 4162382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 18141790 - 18141685
Alignment:
Q  9 ccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||| |||||  | |||||||||||||| |    
T  18141790 ccaaggtgtttacaaatgtttcccaacctaagagaaccctaatcaaagaccctcaaccctaaaattacctccttcgattttcctagtttctctctcttga 18141691  T
Q  108 agctct 113  Q
    ||||||    
T  18141690 agctct 18141685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 1345561 - 1345648
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgattt 87  Q
    |||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  1345561 ttcactcacccaaggtgtttacaatatttcccaactcaagagaactctaatcaaaaaccctcaaccctaaagttacatcctttgattt 1345648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 2627711 - 2627581
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||||||||| ||||||||||||||||| |    
T  2627711 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctctctcttcca 2627612  T
Q  109 gctctctttcaaaatctgca-aagaacactta 139  Q
     ||||| ||| ||||||||| |||||||||||    
T  2627611 actctccttc-aaatctgcacaagaacactta 2627581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 19175620 - 19175448
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||| |||||||| |   | | ||||||| |||||||||||||||||||||||||   || |||||||||||| |||||    
T  19175620 ccaaggtgtttacaatgtttcccaatccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctcacttca 19175522  T
Q  108 agc---tctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttt 176  Q
    |||   |||| ||||||| ||| | ||||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  19175521 agctgatctccttcaaaaactgtacaagaacacttatataacagtcttcagctgtcaaaatcgtatcacgtttt 19175448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 22 - 105
Target Start/End: Original strand, 29796535 - 29796618
Alignment:
Q  22 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    ||||||||||||||||||||||| ||   |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29796535 aatgtttcccaacccaagagaaccctcgccaaagatcctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 29796618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 4743402 - 4743604
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||          ||||||||| |||||||  ||||||| ||    
T  4743402 ccaaggtgtttacaatgtttcccaacccaagagattcctaatcaaagaccctcaaccctaa----------tttgatttcccaagttttcctctcttgaa 4743491  T
Q  109 gctctctttcaaaatctgcaaag-aacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacg 206  Q
     | | |||||||||||||||||| |||||||||||| ||||||||| | ||| ||  ||||| ||| |||| ||| || ||| |||| ||||||||||||    
T  4743492 ccac-ctttcaaaatctgcaaagaaacacttatatagcagtcttcatctgtcaaatacgtgtgacg-ttttgccaaattgtgacacggttgatgcgtacg 4743589  T
Q  207 atccaaggtacgacc 221  Q
    | ||| |||||||||    
T  4743590 acccacggtacgacc 4743604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 18106268 - 18106363
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtt 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||| | |||||||||  ||||||||||||| ||||||    
T  18106268 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaaatctaattaaagaccctctatcctaaagttctctcctttgatttcccaagtt 18106363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 41366804 - 41366879
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttac 75  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||    
T  41366804 ttcactcacccaaggtgtttacaatgtttcccaatctaagagaactctaatcaaagatcctcaaccctaaagttac 41366879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 40321009 - 40320940
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  40321009 caagagaaccctaatcaaagaccctcaacccgaaagttacctcctttgatttccctagtttctctctctt 40320940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8153740 - 8153629
Alignment:
Q  1 ttcactca-ccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||| ||||||||| ||||| ||||||||||||||| |||||  ||||||||||| ||||||| |||| |||||||||||||||||  || |||||    
T  8153740 ttcactcatccaaggtgtatacaaatgtttcccaacccaaaagaacattaatcaaagactctcaaccttaaaattacctcctttgatttcctaaatttct 8153641  T
Q  99 ctctcttcaagc 110  Q
    ||||||| ||||    
T  8153640 ctctcttaaagc 8153629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 3318747 - 3318853
Alignment:
Q  9 ccaaggtgtttacaa-tgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 106  Q
    ||||||||||| ||| ||||||| ||||||||||||| ||  | |||||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||     
T  3318747 ccaaggtgttttcaaatgtttcctaacccaagagaacctcccaccaaagaccctcaaccctaaagttacctcatttgaattctcaactttctctcttttg 3318846  T
Q  107 aagctct 113  Q
    |||||||    
T  3318847 aagctct 3318853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9765727 - 9765622
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaaccc--aagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttc 97  Q
    |||||||||| ||||||||||||||||||||||||||  ||||||||   | |||||||| ||||||||| |||||||||||||||  ||| ||||||||    
T  9765727 ttcactcacccaaggtgtttacaatgtttcccaaccctcaagagaacctcactcaaagacactcaaccctcaagttacctcctttgtattcccaagtttc 9765628  T
Q  98 tctctc 103  Q
    ||||||    
T  9765627 tctctc 9765622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 28307793 - 28307907
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||| |||||||||||||||| ||||||||  |  | ||||||| |||||| ||||||||||||||||||   ||  |||||||||||||||||    
T  28307793 ccaaggtgttaacaatgtttcccaacctaagagaaccgtgctacaaagacactcaactctaaagttacctcctttgtaatcctaagtttctctctcttca 28307892  T
Q  108 agctctctttcaaaa 122  Q
    ||||||| |||||||    
T  28307893 agctctcattcaaaa 28307907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 30291534 - 30291457
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||||  | ||||||||| |||| |||||||    
T  30291534 caagagaaccctaatcaaagaccatcaaccctaaagttacctcctttgattttcctagtttctctttcttgaagctct 30291457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 5990428 - 5990323
Alignment:
Q  8 accaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttg-atttctcaagtttctctctcttc 106  Q
    |||||| || ||||||||||||||||||||||||||| || |  |||||| ||||||||||||||||||  ||||| ||||| |||||||||||||||||    
T  5990428 accaagatgattacaatgtttcccaacccaagagaac-ctcactaaagacactcaaccctaaagttaccgtctttgtatttc-caagtttctctctcttc 5990331  T
Q  107 aagctctc 114  Q
     |||||||    
T  5990330 tagctctc 5990323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 1872173 - 1872237
Alignment:
Q  60 tcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatc 124  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||||||  ||||||||    
T  1872173 tcaaccctaaagttactttctttgatttctcaagtttctctctcttgaagctctccctcaaaatc 1872237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 19752260 - 19752126
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||| |||| ||||||||||||||   | | ||||||| |||||||||||||||||||||||||   || |||||||||||||||  |    
T  19752260 ccaaggtgtttacaatatttcacaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgcgatc-caagtttctctctctaaa 19752162  T
Q  108 agctctctttcaaaatctgcaaag-aacacttatata 143  Q
    | ||||| ||| |||| ||||||| ||||||||||||    
T  19752161 acctctccttc-aaatatgcaaagaaacacttatata 19752126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 3439480 - 3439292
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctct--t 105  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||||||||| |||||||||  |    
T  3439480 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttctcaagtctctctctctctt 3439382  T
Q  106 caagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgat 195  Q
    | | |||||| |  ||||||||| |||||||||| ||||  |||||||  | || |||||||||||||| |||||||| |||||| ||||||    
T  3439381 ccaactctctcttcaaatctgcacaagaacactt-tatactagtcttcctctgttgaaatcgtgtcacgattttccca-atcgtgccacgat 3439292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 38863846 - 38863743
Alignment:
Q  4 actcaccaaggtgtttacaa-tgtttcccaacccaagagaactc-taatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 101  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||| | |  |||||| ||||||| |||||||| ||| ||||||||   |||||||||||    
T  38863846 actctccaagatgtttacaaatgtttcccaacccaagagaactcctcactaaagacactcaaccttaaagttagctcatttgattttcaaagtttctctc 38863747  T
Q  102 tctt 105  Q
    ||||    
T  38863746 tctt 38863743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 32902413 - 32902487
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 110  Q
    ||||||||| || | || ||| ||||||||||||||||||||| | ||||||| |||||||||||||||| ||||    
T  32902413 caagagaaccctcaccatagatcctcaaccctaaagttacctcatctgatttcccaagtttctctctcttgaagc 32902487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 11712191 - 11712306
Alignment:
Q  1 ttcactca-ccaaggtgtttacaa-tgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttc 97  Q
    |||||||| ||||| ||||||||| || |||  ||||||||| ||| ||| | ||||||| |||||||||||||||||||| ||||||  |  |||||||    
T  11712191 ttcactcatccaagatgtttacaaatgcttcggaacccaagaaaacctctcaccaaagacactcaaccctaaagttacctcatttgataccctaagtttc 11712290  T
Q  98 tctctcttcaagctct 113  Q
    |||||||| |||||||    
T  11712291 tctctcttgaagctct 11712306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 41266947 - 41266840
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa-tgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttc 97  Q
    |||||||||| || || ||||||| ||| ||||||||||||||||| ||| | |||||||  ||||||||||||||||||| |||||| ||  | |||||    
T  41266947 ttcactcacccaaagtatttacaactgtctcccaacccaagagaacctctcaccaaagacattcaaccctaaagttacctcatttgatatcctaggtttc 41266848  T
Q  98 tctctctt 105  Q
    ||||||||    
T  41266847 tctctctt 41266840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 7597543 - 7597469
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 110  Q
    ||||||||| || | ||||||| || |||| |||||||| |||| |||||||||||||||| |||||||| ||||    
T  7597543 caagagaaccctcaccaaagactcttaaccataaagttatctcccttgatttctcaagtttatctctcttgaagc 7597469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 44
Target Start/End: Complemental strand, 7493039 - 7493004
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaac 44  Q
    ||||||||||||||||||||||||| ||||||||||    
T  7493039 ccaaggtgtttacaatgtttcccaatccaagagaac 7493004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 219
Target Start/End: Original strand, 19945719 - 19945748
Alignment:
Q  190 cacgattgatgcgtacgatccaaggtacga 219  Q
    ||||||||||||||||||||||||||||||    
T  19945719 cacgattgatgcgtacgatccaaggtacga 19945748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 43036146 - 43036109
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgattg 197  Q
    |||||||||||||||||||| | |||||||||||||||    
T  43036146 aaatcgtgtcacgtttttccaaaatcgtgtcacgattg 43036109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 103
Target Start/End: Complemental strand, 33022997 - 33022953
Alignment:
Q  59 ctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||| |||||||||||| ||||||||  ||||||||||||||    
T  33022997 ctcaaccataaagttacctcgtttgattttccaagtttctctctc 33022953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 173; Significance: 4e-93; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 25412739 - 25412519
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||||    
T  25412739 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaatgttgcctcctttgatttcccaagtttctct 25412640  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||   |||||| |||||||||||||||||||||||||||  |||||| |||||||||||    
T  25412639 ctcttcaagctctccttcaaaatctgcaaagaacacttatatagatgtcttctgcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatg 25412540  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||||||||||||||||||||    
T  25412539 cgtacgatccaaggtacgacc 25412519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 13343038 - 13342818
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| | |||||||||||| |||||||||||    
T  13343038 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcagagaccctaaaccctaaagttgcttcctttgatttcccaagtttctct 13342939  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||| | |||||| || || |||||||||||||||||||||  |||||| |||||||||||    
T  13342938 ctcttcaagctctccttcaaaatctgcaaagaacacttatatagctgtcttctgcctcaaaatcgtgtcacgtttttccccaatcgtgccacgattgatg 13342839  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||    
T  13342838 cgtacgatctaaggtacgacc 13342818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 36074235 - 36074455
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||||||||||    
T  36074235 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctct 36074334  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||| ||||| |||||||||||| ||  |||||| || ||||||||    
T  36074335 ctcttcaagctctccttcaaaatctgcaaagaacacttatatagctgtcttctgcgtcaaaatcatgtcacgttttttcccaatcgtgccatgattgatg 36074434  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||||||||||||||||||||    
T  36074435 cgtacgatccaaggtacgacc 36074455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 30683111 - 30683317
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  30683111 ttcactcaccaaggtgtttacaatgtttcgcaacccaagagaactctaatcaaagaccctcaaccctaaaattacctcctctgatttcccaagtttctct 30683210  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||| || | || |||||||||||||||    
T  30683211 ctcttcaagctctccttcaaaatctgcaaagaacacttatatagcagttttcagcgtcaaaatcgtgtcacgttttcccaaaattgtgtcacgattgatg 30683310  T
Q  201 cgtacga 207  Q
    |||||||    
T  30683311 cgtacga 30683317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 13239729 - 13239509
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||||||||    
T  13239729 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacctcctttgattttctaagtttctct 13239630  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||| ||||  |||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||| |    ||||||||||||||||||    
T  13239629 ctcttcaaactctacttcaaaatctgcaaagaacacttatatagcagtcttcagcgtcaaaattgtgtcacgttttccatcaatcgtgtcacgattgatg 13239530  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    ||||||| |||||||||||||    
T  13239529 cgtacgacccaaggtacgacc 13239509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 30182566 - 30182345
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| | |||||||||||| |||||||||||    
T  30182566 ttcactcaccaaggtgtttgcaatgtttcccaacccaagagaactctaatcaaagaccctaatccctaaagttgcttcctttgatttcccaagtttctct 30182467  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgttttt-cccagatcgtgtcacgattgat 199  Q
    |||||||||||||| ||||||||||||||||||||||| |||| | |||||| ||||| |||||||||||||||||| |||  |||||| ||||||||||    
T  30182466 ctcttcaagctctcattcaaaatctgcaaagaacacttttatagctgtcttctgcgtcaaaatcgtgtcacgtttttcccccaatcgtgccacgattgat 30182367  T
Q  200 gcgtacgatccaaggtacgacc 221  Q
    ||||||||||||||||||||||    
T  30182366 gcgtacgatccaaggtacgacc 30182345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 13488181 - 13487960
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13488181 ttcactcacccaaggtgtttacaatgttttccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 13488082  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||| ||| |||| |||||||| |||||||| |||||| |||| |||     
T  13488081 tctcttctagctctccttcaaaatctgcaaaaaacacttatataacagtcttcagctgtcaaaattgtgtcacg-ttttcccaaatcgtgacacgtttgg 13487983  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||||    
T  13487982 tgcgtacgacccaaggtacgacc 13487960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 42426425 - 42426646
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42426425 ttcactcacccaaggtgtttacaatgtttcccaatctaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 42426524  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| |||| |||||||| |||||||| |||||| || | |||     
T  42426525 tcttttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaattgtgtcacg-ttttcccaaatcgtgacatgtttgg 42426623  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||||    
T  42426624 tgcgtacgacccaaggtacgacc 42426646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 32636802 - 32636581
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32636802 ttcactcacccaaggtgtttacaatgtttcactacccaagagaactctaatcaaagacccttaaccctaaagttacctcctttgatttctcaagtttctc 32636703  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| |||| |||||| ||| ||||| ||||||| |||||||| |||||| |||| |||     
T  32636702 tctctccaagctctccttcaaaatctgcaaagaacacttatatagcagttttcagctgtcaaaatcatgtcacg-ttttcccaaatcgtgacacgtttgg 32636604  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    |||||| || |||||||||||||    
T  32636603 tgcgtaagacccaaggtacgacc 32636581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 533747 - 533540
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  533747 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccccaaccctaaagttacctcctttgatttcccaaatttctc 533648  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||||||| |||||||| |||||| |||| |||     
T  533647 tctcttcaacctctccttcaaaatctgcaaaaaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttgg 533549  T
Q  199 tgcgtacga 207  Q
    |||||||||    
T  533548 tgcgtacga 533540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 28750845 - 28751039
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28750845 ttcactcacccaaggtgttttcaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 28750944  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacg 193  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||| ||| ||||||||||||| |||||||| || ||||||||    
T  28750945 tctcttcaagctctctttcaaaatctgcataagaacacttatatagcagacttcagctgtcaaaatcgtgtcacg-ttttcccaaattgtgtcacg 28751039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 42428620 - 42428827
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||    
T  42428620 ttcactcacccaaggtgtttacaatatttcccaacccaagagaactctaatcaaagaccttcaaccctaaagttatctcctttgatttcccaagtttctc 42428719  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||  ||| ||||||||||| | |||||| | |||||| |||| |||     
T  42428720 tctcttcaagctctccttcaaaatctgcaaagaacatttatatagcagtcttcagttgtcaaaatcgtgtca-ggttttcctaaatcgtgacacgtttgg 42428818  T
Q  199 tgcgtacga 207  Q
    |||||||||    
T  42428819 tgcgtacga 42428827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 37439111 - 37438904
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||| |||||||||||||||||||||||||||||              |||||||||||||||||||||| ||||||||  |||||||||||    
T  37439111 ttcactcaccaaagtgtttacaatgtttcccaacccaagaga--------------ccctcaaccctaaagttacctcatttgattttccaagtttctct 37439026  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttc---ccagatcgtgtcacgattg 197  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| | || |||| |||||||||||||    ||| |||||||||||||||    
T  37439025 ctcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcaacatcaaaattgtgtcacgtttttttttcca-atcgtgtcacgattg 37438927  T
Q  198 atgcgtacgatccaaggtacgac 220  Q
    |||||||||| ||||||||||||    
T  37438926 atgcgtacgacccaaggtacgac 37438904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 39468739 - 39468862
Alignment:
Q  1 ttcactcac-caaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39468739 ttcactcactcaaggtgtttacaatgtttcccaacccaagagaactctaatgaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 39468838  T
Q  100 tctcttcaagctctctttcaaaat 123  Q
    ||||||||||||||| ||||||||    
T  39468839 tctcttcaagctctccttcaaaat 39468862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 14520461 - 14520673
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   ||| |||||||||||||||||    
T  14520461 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatct-aagtttctctctcttca 14520559  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| |||||||||||||||  ||||| |||| ||| |||||||||||||||||  ||| |||||| ||||||| ||||||||    
T  14520560 agctctccttcaaaatctgcacaagaacacttatataggagtctccagctgtcaaaatcgtgtcacgtttt--ccaaatcgtgacacgattaatgcgtac 14520657  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  14520658 gacccaaggtacgacc 14520673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 19806362 - 19806163
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||                      |||||||||||    
T  19806362 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccc----------------------tcaagtttctc 19806285  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||||  ||||| |||| |||     
T  19806284 tctcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaagtcgtgacacgtttgg 19806186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 11916838 - 11916625
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||  |||||||||||||||||||||||||   || |||||||||||| |||||    
T  11916838 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagaaactcaaccctaaagttacctcctttgtaatc-caagtttctctcacttca 11916740  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| |||| |||| | ||| ||||||||||||| ||||| || ||||||  ||||||| |||||||    
T  11916739 agctctccttcaaaatctgcacaagaacacttatatagcagttttcaactgtcaaaatcgtgtcacg-ttttctcaaatcgtgatacgattggtgcgtac 11916641  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  11916640 gacccaaggtacgacc 11916625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 31182951 - 31182836
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |    
T  31182951 ttcactcacctaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcc 31182852  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  31182851 tctcttgaagttctct 31182836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 5887606 - 5887721
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  |    
T  5887606 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaataccctcaaccctaaagttacctcctttgatttcccaagttttcc 5887705  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  5887706 tctcttgaagttctct 5887721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 16452057 - 16451946
Alignment:
Q  2 tcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 101  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||  |||    
T  16452057 tcacttaccaaggtgtttacaatgtttccgaacccaagagaactctaatcaaagatcctcaaccctaaagttacctcctttgatttcccaagttttcctc 16451958  T
Q  102 tcttcaagctct 113  Q
    |||| |||||||    
T  16451957 tcttgaagctct 16451946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 42926871 - 42926745
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||||| ||||||| ||    
T  42926871 ttcactcacccaaggtgtttacaatgtttcccaatccaagagaactctaatcaaagaccatcaatcctaaagttacctcatttgatttcccaagtttttc 42926772  T
Q  100 tctcttcaagctctctttcaaaatctg 126  Q
    |||||| |||||||| | |||||||||    
T  42926771 tctcttgaagctctcatccaaaatctg 42926745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 16409460 - 16409321
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||||||||| ||||||||||    
T  16409460 ttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctc 16409361  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacactta 139  Q
    ||||||| | ||||| ||||||||||||| |||||||||||    
T  16409360 tctcttccaactctc-ttcaaaatctgcacaagaacactta 16409321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 538003 - 537901
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  538003 ttcactcacccaaggtgtttacgatgtttcccaagccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagtttctc 537904  T
Q  100 tct 102  Q
    |||    
T  537903 tct 537901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 16649857 - 16650034
Alignment:
Q  45 tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgcaaag-aacacttatata 143  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||  ||||||| || || || |||||||||||||||| ||||||||||||    
T  16649857 tctaatcaaagaccatcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaacctatcattcaaaatctgcaaagaaacacttatata 16649956  T
Q  144 acagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
      |||||| ||| ||| ||||| ||||||  |||| ||| |||||| |||| ||| |||||||||||||||||||||||    
T  16649957 gtagtctttagctgtcaaaatcatgtcac-attttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgacc 16650034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 11181698 - 11181554
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||||||||||||||   | | ||||||| ||||||| |||||||||||||||||    | ||||||||||||||||||    
T  11181698 ccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccataaagttacctcctttgtaaac-caagtttctctctcttca 11181600  T
Q  108 agctctctttcaaaatctgcaaagaacacttatataacagtcttca 153  Q
    ||||||  ||||||| ||||||||||||||||||||||||||||||    
T  11181599 agctctacttcaaaaactgcaaagaacacttatataacagtcttca 11181554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 12084043 - 12083831
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatc-aaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||| ||||||| ||||||||||||| |   | |  |||||| |||||||||||||||||||||||||   || |||||||||||| ||||     
T  12084043 ccaaggtgtttaaaatgtttaccaacccaagagatcctcactataaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctcacttct 12083945  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||| | ||| |||| ||||||||||||  ||| |||||| |||||||| ||| |||    
T  12083944 agctctccttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcacgtttt--ccaaatcgtgacacgattggtgcatac 12083847  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  12083846 gacccaaggtacgacc 12083831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 26170759 - 26170620
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||| || ||||||| ||||||  ||||||||||| ||||||||||    
T  26170759 ttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctgtaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctc 26170660  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacactta 139  Q
    ||||||| | ||||| ||||||||||||| |||||||||||    
T  26170659 tctcttccaactctc-ttcaaaatctgcacaagaacactta 26170620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 26177868 - 26177729
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||||||||| ||||||||||    
T  26177868 ttcactcaccaaggtgtttaccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctc 26177769  T
Q  100 tctcttcaagctctctttcaaaatctgc-aaagaacactta 139  Q
    ||||||| | ||||| ||||||||||||  |||||||||||    
T  26177768 tctcttccaactctc-ttcaaaatctgcgcaagaacactta 26177729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 105
Target Start/End: Original strand, 3075859 - 3075953
Alignment:
Q  11 aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||  |||||||    
T  3075859 aaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttccaaagttttactctctt 3075953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 9789407 - 9789546
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||||||||| ||||||||||    
T  9789407 ttcactcaccaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctc 9789506  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacactta 139  Q
    ||||||| | ||||| ||| ||||||||| |||||||||||    
T  9789507 tctcttccaactctccttc-aaatctgcacaagaacactta 9789546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 18441831 - 18441970
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||  ||||||||||| ||||||||||    
T  18441831 ttcactcaccaaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagtttctc 18441930  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacactta 139  Q
    ||||||| | ||||| ||| ||||||||| |||||||||||    
T  18441931 tctcttccaactctccttc-aaatctgcacaagaacactta 18441970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 8566136 - 8566252
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctca-accctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||| |||||||      
T  8566136 ttcactcacccaaggtgtttacaatgtttccgaacccaagagaactctaatcaaagaccctcatgccctaaagttacctcatttgatttcccaagttttc 8566235  T
Q  99 ctctcttcaagctctct 115  Q
    ||||||| ||| |||||    
T  8566236 ctctcttgaagttctct 8566252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 33831658 - 33831562
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 96  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| |||||||    
T  33831658 ttcactcacccaaggtgtttacaatgttttccaacccaagagaactctaatcaaagacccttaaccctaaaattaactcctttgatttcccaagttt 33831562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 9353198 - 9352988
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| || ||||||||||||||||||||||   || ||||||||||||||||||    
T  9353198 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacacttaaccctaaagttacctcctttgtaatc-caagtttctctctcttca 9353100  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
      |||||   ||||||||||| ||||||||||| ||| ||||||||||| |   |||||||| ||||||||  ||| |||||| ||||||||||  ||||    
T  9353099 tcctctc--ccaaaatctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacgtttt--ccaaatcgtgccacgattgatatgtac 9353004  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  9353003 gacccaaggtacgacc 9352988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 36932214 - 36932003
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatc-aaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | |  |||||| ||||||||||||||| |||||||||   || |||||||||||||||||     
T  36932214 ccaaggtgtttacaatgtttcccaacccaagagatcatcactataaagacactcaaccctaaagttccctcctttgcaatc-caagtttctctctcttc- 36932117  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| | ||||| ||||| ||||||||||| ||| ||||||||||| |   |||||||| |||| ||||  || || |||||||||||||| |||||    
T  36932116 agctctcctccaaaaactgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacgatttt--caaattgtgtcacgattgatacgtac 36932019  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  36932018 gacccaaggtacgacc 36932003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 42310140 - 42310227
Alignment:
Q  15 tgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctct 102  Q
    |||||||||||||| |||||| |||||||| ||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||    
T  42310140 tgtttacaatgttttccaaccaaagagaaccctaatcaaagaccataaaccctaaagttacctcctttgatttcccaagtttctctct 42310227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 17003825 - 17003690
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||| |||||||||||||   | | |||||||  ||||||||||||||| ||||||||   || |||||||||||||||  |    
T  17003825 ccaaggtgtttacaatgtttccaaacccaagagaacctcactacaaagacattcaaccctaaagttatctcctttgtaatc-caagtttctctctctcaa 17003727  T
Q  108 agctctctttcaaaatctgcaaag-aacacttatata 143  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  17003726 agctctccttcaaaatctgcaaagaaacacttatata 17003690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 207
Target Start/End: Original strand, 15464765 - 15464963
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||| |||||||||||||||||||| |   | | ||||||| ||||||||||||||| ||| |||||   || ||||||||||||||||||    
T  15464765 ccaaggtgtttacgatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagtttccttctttgtaatc-caagtttctctctcttca 15464863  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttc-agcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| | ||||||||||| ||||||||||| |||  ||||||| |  |   |||||||| |||| |||  ||| ||||||||||||||||| |||||    
T  15464864 agctctcctccaaaatctgcacaagaacacttaaatactagtcttctactgataaaatcgtgccacgattt--ccaaatcgtgtcacgattgatacgtac 15464961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 24553393 - 24553257
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||||||||||||| |||    ||||||| ||||||||| |||||||||||||||   || ||||||||| |||||  |    
T  24553393 ccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaacccttaagttacctcctttgtaatc-caagtttctttctctaaa 24553295  T
Q  108 agctctctttc-aaaatctgcaaag-aacacttatata 143  Q
    || |||| ||| ||||||||||||| ||||||||||||    
T  24553294 agttctccttcaaaaatctgcaaagaaacacttatata 24553257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 133
Target Start/End: Complemental strand, 31300461 - 31300337
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||| ||||||||||||||   | | ||||||| ||||||| |||||||||||||||||   || |||||||||||||||  |    
T  31300461 ccaaggtgtttacaatgtttctcaacccaagagaacctcactacaaagacactcaaccttaaagttacctcctttgcaatc-caagtttctctctctaaa 31300363  T
Q  108 agctctctttcaaaatctgcaaagaa 133  Q
    | ||||  ||||||||||||||||||    
T  31300362 acctcttcttcaaaatctgcaaagaa 31300337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 9049591 - 9049655
Alignment:
Q  46 ctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 110  Q
    ||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  9049591 ctaatcaaagactttcaaccctaaagttatctcctttgatttctcaagtttctctctcttgaagc 9049655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 10281983 - 10282080
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||||||||||||||| ||||||  ||||||||   | | ||||||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  10281983 ccaaggtgtttacaatgtttcacaaccctcaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattctcaagtttctctctc 10282080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 195
Target Start/End: Complemental strand, 10593212 - 10593048
Alignment:
Q  33 acccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgca-a 129  Q
    |||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||||| ||||| ||||||||||| | |||||| |  ||||||||| |    
T  10593212 acccaagagatactctaatcaaagaaccctaaaccctagagttccc-cctttgatttcccaagtctctctctcttccaactctctcttcaaatctgcaca 10593114  T
Q  130 agaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgat 195  Q
    |||||||||| |||  |||||||  | || ||||||||||||||  ||||||| |||||||||||||    
T  10593113 agaacacttacatactagtcttcctctgttgaaatcgtgtcacg-atttcccaaatcgtgtcacgat 10593048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 28832488 - 28832583
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctct 104  Q
    ||||||||||||||||||||||||||||||||||| |||    ||||||| |||||| ||||||||||||||||||   || |||||||||||||||    
T  28832488 ccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaactctaaagttacctcctttgtaatc-caagtttctctctct 28832583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 535760 - 535685
Alignment:
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgttt 175  Q
    |||||||| ||||| |||||||||||||||||||| ||||||| ||||||||||| ||| |||||||| |||||||    
T  535760 ctcttcaacctctccttcaaaatctgcaaagaacaattatatatcagtcttcagctgtcaaaatcgtgacacgttt 535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 13695945 - 13696010
Alignment:
Q  51 caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctt 116  Q
    ||||||| ||||||||||||| || || ||||||||||||||||||||||||||| |||| |||||    
T  13695945 caaagacactcaaccctaaagctatcttctttgatttctcaagtttctctctcttaaagcactctt 13696010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 29720340 - 29720228
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||| |||||||||||||||||     
T  29720340 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttcc 29720242  T
Q  108 agctctctttcaaa 121  Q
    | ||||| ||||||    
T  29720241 aactctccttcaaa 29720228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 139
Target Start/End: Complemental strand, 29722500 - 29722370
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||| ||||||||||||| |||     
T  29722500 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttctctcttttcc 29722402  T
Q  108 agctctctttcaaaatctgca-aagaacactta 139  Q
    | ||||| ||| ||||||||| |||||||||||    
T  29722401 aactctccttc-aaatctgcacaagaacactta 29722370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 3325892 - 3325778
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||||| ||||||||||||| |||||| |||| ||||||||| || | ||||||| ||| |||||||| ||||    ||||||||| ||| |||||    
T  3325892 ttcactcacccaaggtgtttacaaatgtttctcaactcaagagaacactcaccaaagacactcgaccctaaaattactctttttgatttcccaattttct 3325793  T
Q  99 ctctcttcaagctct 113  Q
    ||||||| |||||||    
T  3325792 ctctcttaaagctct 3325778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 29751352 - 29751464
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||| ||||| |||||||||||     
T  29751352 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctctcttcc 29751450  T
Q  108 agctctctttcaaa 121  Q
    | ||||| ||||||    
T  29751451 aactctccttcaaa 29751464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 19588976 - 19589051
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttg 83  Q
    ||||| ||||||||||||||||||||||||||||  |||    ||||||| |||||||||||| ||||||||||||    
T  19588976 ccaagatgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaaattacctcctttg 19589051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5007529 - 5007419
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa---tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 96  Q
    |||||||||| |||||||||||||   ||||||  ||| ||||||||| || | ||||||  |||||||||||||||||||||||||||||   ||||||    
T  5007529 ttcactcacctaaggtgtttacaaatatgtttc--aactcaagagaac-ctcaccaaagatactcaaccctaaagttacctcctttgattttctaagttt 5007433  T
Q  97 ctctctcttcaagc 110  Q
     |||||||| ||||    
T  5007432 ttctctcttaaagc 5007419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 5057648 - 5057588
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||||||||||||||| |||| || ||| |||| ||||||||||||| | |||||||||||    
T  5057648 aaatcgtgtcacgtttt-cccaaattgtgacacggttgatgcgtacgaccaaaggtacgacc 5057588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 16650973 - 16651033
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    |||||||||||| |||| || | |||||| |||| ||| |||||||||||||||||||||||    
T  16650973 aaatcgtgtcacattttgccaa-atcgtgacacggttggtgcgtacgatccaaggtacgacc 16651033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 27015131 - 27015071
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||||||||||| ||| |||| |||||| |||| ||| ||||||||| |||||||||||||    
T  27015131 aaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgacc 27015071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 169; Significance: 9e-91; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 5406389 - 5406609
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  5406389 ttcactcaccaaggtgtttacaatgtttcccaacccgagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctct 5406488  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||| | ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  5406489 ctcttcaagctcaccttcaaaatctgcaaataacacttatatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatg 5406588  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    ||||||| |||||||||||||    
T  5406589 cgtacgacccaaggtacgacc 5406609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 5410714 - 5410934
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  5410714 ttcactcaccaaggtgtttacaatgtttcccaacccgagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctct 5410813  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||| | ||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  5410814 ctcttcaagctcaccttcaaaatctgcaaataacacttatatagcaatcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatg 5410913  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    ||||||| |||||||||||||    
T  5410914 cgtacgacccaaggtacgacc 5410934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 31404864 - 31405085
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaa-gaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||    
T  31404864 ttcactcaccaaggtgtttacaatgttttccaacccaagagaactctaatcaaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctc 31404963  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgat 199  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||  |||||| ||||||||||    
T  31404964 tctcttcaagctctccttcaaaatctgcaaataacacttatatagctgtcttcagcgtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgat 31405063  T
Q  200 gcgtacgatccaaggtacgacc 221  Q
    |||||||| | |||||||||||    
T  31405064 gcgtacgacctaaggtacgacc 31405085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30834727 - 30834948
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| | ||||||||||||||||||||||||    
T  30834727 ttcactcaccgaggtgtttacaatgtttctcaacccaagagaactctaatcaaagaccataaaccctaaagttgcttcctttgatttctcaagtttctct 30834826  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacg-tttttcccagatcgtgtcacgattgat 199  Q
    |||||||||||||| ||||||||||||||||||||||||||||   |||||| | ||| ||||||||||||| ||||||||  |||||| ||||||||||    
T  30834827 ctcttcaagctctccttcaaaatctgcaaagaacacttatatagttgtcttctgtgtcaaaatcgtgtcacgttttttccccaatcgtgccacgattgat 30834926  T
Q  200 gcgtacgatccaaggtacgacc 221  Q
    ||||||||||||||||||||||    
T  30834927 gcgtacgatccaaggtacgacc 30834948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 33160544 - 33160765
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaag-tttctc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||| ||||||    
T  33160544 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagactctcaaccctaaagttacctcctttgattccccaagttttctc 33160643  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgat 199  Q
    ||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||| |    |||||||||||||||||    
T  33160644 tctcttccagctctccatcaaaatctgcaaagaacacttatatagcagtcttcagcgtcaaaattgtgtcacgttttccatcaatcgtgtcacgattgat 33160743  T
Q  200 gcgtacgatccaaggtacgacc 221  Q
    |||||||| |||| ||||||||    
T  33160744 gcgtacgacccaatgtacgacc 33160765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 16452520 - 16452740
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||| | | |||||||||| |||||||||||    
T  16452520 ttcactcaccaaggtgtttacaatgtttctcaacccaagagaactctaatcaaagaccctaaactctaaagttgcttactttgatttcccaagtttctct 16452619  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||| | |||||||||||||||||||||||||||| | ||||||| |||| |||||||||||||||||||||  |||||| || ||||||||    
T  16452620 ctcttcaagctcaccttcaaaatctgcaaagaacacttatatagctgtcttcatcgtctaaatcgtgtcacgtttttccccaatcgtgccatgattgatg 16452719  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    ||||||| |||||||||||||    
T  16452720 cgtacgacccaaggtacgacc 16452740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 5413583 - 5413775
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  5413583 ttcactcaccaatgtgtttacaatgtttcccaacccgagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctct 5413682  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacg 193  Q
     ||||||||||| | |||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||  |||||| ||||    
T  5413683 atcttcaagctcaccttcaaaatctgcaaagaacacttatatagcaatcttcagcgtcgaaatcgtgtaacgtttttccccaatcgtgccacg 5413775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 9183221 - 9183393
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9183221 ttcactcacccaaggtgtttacaatgtttcccaacccaggagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 9183320  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacg 172  Q
    ||||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||    
T  9183321 tctcttcaagctctccttcaaaatctgcaaagaaaacttatatagtagtcttcagcgtcaaaatcgtgtcacg 9183393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 33211384 - 33211552
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||    
T  33211384 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaactgtaaagttacctcctttgatttcccaagtttctctctcttcaa 33211483  T
Q  109 gctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttt 176  Q
      |||| |||| ||||||||||||||||||||||| |||| || ||| ||| ||||||||||| |||||    
T  33211484 cttctccttcacaatctgcaaagaacacttatatagcagtattgagctgtcaaaatcgtgtcatgtttt 33211552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 66 - 221
Target Start/End: Original strand, 5411489 - 5411644
Alignment:
Q  66 ctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcg 165  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| || ||||||||||||||||||    
T  5411489 ctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttatatagcaatcttcagcgtcgaaatcg 5411588  T
Q  166 tgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    |||||| ||||||||  |||||| |||||||||||||||||| |||||||||||||    
T  5411589 tgtcacatttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgacc 5411644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 66 - 221
Target Start/End: Original strand, 5407164 - 5407319
Alignment:
Q  66 ctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcg 165  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| || ||||||||||||||||||    
T  5407164 ctaaagttgcctcctttgatttcccaagtttctctctcttcaagctcaccttcaaaatctgcaaagaacacttatatagcaatcttcagcgtcgaaatcg 5407263  T
Q  166 tgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    |||||| ||||||    ||||||||||||||||||||||||| |||||||||||||    
T  5407264 tgtcacatttttcttcaatcgtgtcacgattgatgcgtacgacccaaggtacgacc 5407319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 31086340 - 31086126
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||| ||||| |||||| |   | | ||||||| |||||||||||||||||| ||||||   || |||||||||||||||||     
T  31086340 ccaaggtgtttacaatgtttctcaacctaagagatcctcactacaaagacactcaaccctaaagttaccccctttgtaatc-caagtttctctctcttcc 31086242  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagcg-tcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||| | ||||||||||||| ||||||||||||||| |||||||||||  || |||||||||||||||||| ||| |||||| |||||||| |||||||    
T  31086241 agctcaccttcaaaatctgcacaagaacacttatatagcagtcttcagctatcaaaatcgtgtcacgtttttgccaaatcgtgacacgattggtgcgtac 31086142  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  31086141 gacccaaggtacgacc 31086126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 22963930 - 22964142
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||| |||||||| ||  | | ||||||| |||||||||||||||| ||| ||||   ||  |||||||||||| ||||    
T  22963930 ccaaggtgtttacaatgtttcccaatccaagagatcttcactacaaagacactcaaccctaaagttagctcttttgtaatca-aagtttctctcttttca 22964028  T
Q  108 agctctctttcaaaatctgcaaagaacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacg 206  Q
    ||||||  |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| |||||||| || ||| |||| |||  |||||||    
T  22964029 agctctagttcaaaatctgcaaagaacacttatatagcagtcttcagccgtcaaaatcgtgtcacg-ttttcccaaattgtgacacgtttggcgcgtacg 22964127  T
Q  207 atccaaggtacgacc 221  Q
    || ||||||||||||    
T  22964128 atacaaggtacgacc 22964142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 23824463 - 23824251
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||| |||||||| ||  | | ||||||| |||||||||||||||| ||| ||||   ||  |||||||||||| ||||    
T  23824463 ccaaggtgtttacaatgtttcccaatccaagagatcttcactacaaagacactcaaccctaaagttagctcttttgtaatca-aagtttctctcttttca 23824365  T
Q  108 agctctctttcaaaatctgcaaagaacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacg 206  Q
    ||||||  |||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||| |||||||| || ||| |||| |||  |||||||    
T  23824364 agctctagttcaaaatctgcaaagaacacttatatagcagtcttcagccgtcaaaatcgtgtcacg-ttttcccaaattgtgacacgtttggcgcgtacg 23824266  T
Q  207 atccaaggtacgacc 221  Q
    || ||||||||||||    
T  23824265 atacaaggtacgacc 23824251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 2171721 - 2171860
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| |  ||||||||||| ||||||||||    
T  2171721 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctc 2171820  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacactta 139  Q
    ||||||| ||||| | ||| ||||||||| |||||||||||    
T  2171821 tctcttctagctcaccttc-aaatctgcacaagaacactta 2171860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 51 - 221
Target Start/End: Original strand, 18234357 - 18234527
Alignment:
Q  51 caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtc 149  Q
    ||||||| ||||||||||||| |||||||||||   || ||||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||| |||||    
T  18234357 caaagacactcaaccctaaagctacctcctttgtaatc-caagtttctttctcttcaagctctccttcaaaaactgcacaagaacacttatatagcagtc 18234455  T
Q  150 ttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    |||||| ||| |||||||||||||||| | ||| |||||| |||||||| ||||||||| |||||||||||||    
T  18234456 ttcagctgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtacgacccaaggtacgacc 18234527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 28137598 - 28137713
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||  |    
T  28137598 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttaactcctttgattttccaagttttcc 28137697  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  28137698 tctcttgaagttctct 28137713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 5757344 - 5757132
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   ||| ||||||| |||||||||||||||||||||||||   || |||||||||||||||||     
T  5757344 ccaaggtgtttacaatgtttcccaacccaagagatcctaaatacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttcc 5757246  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| | ||||||||||| || ||||||||| || ||||||||||| |   |||||||| ||||||||  ||| |||||| |||||||||| | |||    
T  5757245 agctctcctccaaaatctgcacaaaaacacttatttagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcgtgccacgattgatacatac 5757148  T
Q  206 gatccaaggtacgacc 221  Q
    || | |||||||||||    
T  5757147 gaccaaaggtacgacc 5757132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 26954486 - 26954590
Alignment:
Q  11 aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 110  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||  ||||||| ||||    
T  26954486 aaggtgtttacaatgtttcccaacctaagataactctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagc 26954585  T
Q  111 tctct 115  Q
    |||||    
T  26954586 tctct 26954590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 16567184 - 16567069
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||  |    
T  16567184 ttcactcacccaaggtgtttacaatgtttccaaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcc 16567085  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  16567084 tctcttgaagttctct 16567069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 221
Target Start/End: Complemental strand, 10077014 - 10076844
Alignment:
Q  51 caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtc 149  Q
    ||||||| |||||||||||||||||||||||||   || |||||||||||||||| |||||||| ||||||||||||| |||||||  |||||| || ||    
T  10077014 caaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttaaagctctccttcaaaatctgcacaagaacatatatatagcaatc 10076916  T
Q  150 ttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    |||||| ||| || ||||||||||||| | ||| |||||| |||||||| ||||||||| |||||||||||||    
T  10076915 ttcagctgtcaaagtcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtacgacccaaggtacgacc 10076844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 5017362 - 5017149
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||| ||| ||||   || ||||||||||| ||||      
T  5017362 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttatctcgtttgtaatc-caagtttctctttctttt 5017264  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
      ||||| ||||||||||||| ||||||||||||||| | ||||||||| ||| |||||||||||| ||||| | | |||||| |||||||| |||||||    
T  5017263 tcctctccttcaaaatctgcacaagaacacttatatagcggtcttcagctgtcaaaatcgtgtcacattttttcaa-atcgtgacacgattggtgcgtac 5017165  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  5017164 gacccaaggtacgacc 5017149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 16569012 - 16568916
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||  |||||||||||| |||||||  |||||||    
T  16569012 ccaaggtgtttacaatgtttccaaacccaagagaactctaatcaaagacccttaaccctaaatttaattcctttgatttcccaagttttcctctctt 16568916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 24435837 - 24435625
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||||||||||||||||||| |||||||||   |  ||||||| |||||||||||||||| ||||||||   || | |||||||||||||||||    
T  24435837 ccaaggtgtttacaatgtttcccaactcaagagaacctcacacaaagacactcaaccctaaagttatctcctttgtaatc-ctagtttctctctcttcaa 24435739  T
Q  109 gctctctttcaaaatctgcaaa-gaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacg 206  Q
    ||| |  |||||||| ||||||  |||||||||||| ||||||||| | ||| || ||||||||||  ||  ||| |||||| |||| ||| |||||||     
T  24435738 gctattcttcaaaatttgcaaacaaacacttatatagcagtcttcaactgtcaaattcgtgtcacg-attggccaaatcgtgacacggttggtgcgtaca 24435640  T
Q  207 atccaaggtacgacc 221  Q
    | |||||||||||||    
T  24435639 acccaaggtacgacc 24435625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 16452759 - 16452851
Alignment:
Q  129 aagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||||||||||||| | ||||||| |||| |||||||||||||||||||||  |||||| |||||||||||||||||| |||||||||||||    
T  16452759 aagaacacttatatagctgtcttcatcgtctaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgacc 16452851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 31979743 - 31979961
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||| |||||||| |||||   | | ||||||| |||||||||||||||||||||||||   || |||||||||||||||  |    
T  31979743 ccaaggtgtttacaatgtttctcaacccaaaagaacctcactacaaagacactcaaccctaaagttacctcctttgcagtc-caagtttctctctctaaa 31979841  T
Q  108 agctctctttcaaaatctgcaaag--aacact----tatataacagtcttc-agcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||| |||||||||| ||||  ||||||    |||||| |||||||| |  ||| |||||||||||||||| | ||| |||||| |||||||| ||    
T  31979842 agctctctctcaaaatctggaaagaaaacacttatatatatagcagtcttcaattgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtg 31979940  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||||||  ||| ||||||||    
T  31979941 cgtacgactcaaagtacgacc 31979961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 5572109 - 5571945
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| | | | | ||||||| | ||||||||||||||||||| |||   || |||||||||||||| | |    
T  5572109 ccaaggtgtttacaatgtttcccaacccaagagatccccactacaaagacacccaaccctaaagttacctccattgtaatc-caagtttctctctc-taa 5572012  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcag-cgtcgaaatcgtgtcacg 172  Q
    ||||||| ||||||| || || ||||||||||||||| ||||||||||  ||| |||||||||||||    
T  5572011 agctctccttcaaaaactccacaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcacg 5571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 6097623 - 6097728
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaag-accctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| ||||| ||||||| |||| |  ||||||||||| |||||||||    
T  6097623 ttcactcaccaaggtgtttaccatgtttcccaaccaaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtttct 6097722  T
Q  99 ctctct 104  Q
    ||||||    
T  6097723 ctctct 6097728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3039093 - 3039220
Alignment:
Q  1 ttcactcac-caaggtgtttacaatgtttcccaacccaagagaact-------------ctaatcaaagaccctcaaccctaaagttacctcctttgatt 86  Q
    ||||||||| |||||||||||||||||||||||||||||||||||              ||||||||||||||||||||||||||||||||||||||| |    
T  3039093 ttcactcactcaaggtgtttacaatgtttcccaacccaagagaacctctcaagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttga-t 3039191  T
Q  87 tctcaagtttctctctcttcaagctctct 115  Q
    || ||||||| |||||||| |||||||||    
T  3039192 tcccaagtttttctctcttgaagctctct 3039220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 31936806 - 31936941
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||| ||| |   | | ||||||| |||||||||||||||||||||||||   || |||||||||||||||  |    
T  31936806 ccaaggtgtttacaatgtttcccaacccaatagatcctcactacaaagacactcaaccctaaagttacctcctttgcaatc-caagtttctctctctaaa 31936904  T
Q  108 agctctctttcaaaatctgcaaag-aacacttatata 143  Q
    | ||||  |||||||||||||||| ||||||||||||    
T  31936905 acctctacttcaaaatctgcaaagaaacacttatata 31936941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 21272846 - 21272642
Alignment:
Q  18 ttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctt 116  Q
    |||||||||||| ||||||||||||||   | | ||||||| |||||||||||||||||| ||||||   ||  ||||||||||| ||||||| |||  |    
T  21272846 ttacaatgtttcgcaacccaagagaacctcactacaaagacactcaaccctaaagttaccccctttgtaatca-aagtttctctcacttcaagttctact 21272748  T
Q  117 tcaaaatctgcaaag-aacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaagg 214  Q
    |||||| |||||||| |||||||||||| ||||||||||  ||| |||| ||||||||  ||  ||| ||| || |||| ||| ||||||||||||||||    
T  21272747 tcaaaaactgcaaagaaacacttatatagcagtcttcagttgtcaaaattgtgtcacg-attggccaaatcttgacacggttggtgcgtacgatccaagg 21272649  T
Q  215 tacgacc 221  Q
    || ||||    
T  21272648 tatgacc 21272642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 412077 - 411981
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 106  Q
    |||||||||| | |||||| | |||||||||||| |||||||||||||| || ||||||| ||||||  |||||||||||||||||||||||||||||    
T  412077 caaggtgtttcccatgttttc-aacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttctcaagtttctctctcttc 411981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 3072952 - 3073045
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctct 102  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| |||| |  ||||||||||| |||||||||||||    
T  3072952 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagtttctccctttgatttcccaagtttctctct 3073045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 155
Target Start/End: Original strand, 23896628 - 23896730
Alignment:
Q  53 aagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtctt 151  Q
    ||||| |||||| ||||||||||||||||||   || ||||||||||||||||||||||||  |||||||| |||| |||||| |||||||| |||||||    
T  23896628 aagacactcaactctaaagttacctcctttgtaatc-caagtttctctctcttcaagctcttcttcaaaatatgcacaagaactcttatatagcagtctt 23896726  T
Q  152 cagc 155  Q
    ||||    
T  23896727 cagc 23896730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 21801210 - 21801113
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||||||||||||||||||||||  ||||||||   | | ||||||| ||||||||| ||||||||| |||||  ||||||||||||||||||    
T  21801210 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctcaagttacctgctttgtattctcaagtttctctctc 21801113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 27647819 - 27647709
Alignment:
Q  31 caacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgca 128  Q
    |||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||| ||||| ||||||||||| | |||||| |  |||||||||    
T  27647819 caacccaagagatactctaatcaaagaaccctaaaccctagagtttctccctttgatttcccaagtctctctctcttccaactctctcttcaaatctgca 27647720  T
Q  129 -aagaacactt 138  Q
     ||||||||||    
T  27647719 caagaacactt 27647709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 113
Target Start/End: Original strand, 22709241 - 22709345
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||| |||| |||||||||   || ||||||| ||||||||||    
T  22709241 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcctttgtaatc-caagtttttctctcttca 22709339  T
Q  108 agctct 113  Q
    | ||||    
T  22709340 aactct 22709345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 4045339 - 4045283
Alignment:
Q  54 agaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 110  Q
    |||| ||||| || |||||||||||| ||||||||||||||||||||||||| ||||    
T  4045339 agactctcaatccaaaagttacctccattgatttctcaagtttctctctcttaaagc 4045283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 5413807 - 5413859
Alignment:
Q  169 cacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||||||||||  |||||| |||||||||||||||||| |||||||||||||    
T  5413807 cacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgacc 5413859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 183 - 221
Target Start/End: Original strand, 9183383 - 9183421
Alignment:
Q  183 atcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  9183383 atcgtgtcacgattgatgcgtacgacccaaggtacgacc 9183421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 30684121 - 30684211
Alignment:
Q  26 tttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctct 115  Q
    ||||||||||||| ||||| | | |||||| |  ||||||||||||||||| |  ||||||||  |||||||||||||||| |||||||||    
T  30684121 tttcccaacccaaaagaacctttcatcaaatatgctcaaccctaaagttacttgatttgatttaccaagtttctctctcttgaagctctct 30684211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 102
Target Start/End: Complemental strand, 30517954 - 30517894
Alignment:
Q  42 aactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctct 102  Q
    |||||| | ||||||| |||||| |||||||| |||| ||||||||| |||||||||||||    
T  30517954 aactctcaccaaagacactcaactctaaagttccctcatttgatttcccaagtttctctct 30517894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 20505073 - 20505163
Alignment:
Q  24 tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctct 115  Q
    ||||||||||||||||| |||||| | ||||| | ||| | |||||||||||||| |||| |||  |||| |||||||| || |||||||||    
T  20505073 tgtttcccaacccaaga-aactctcaccaaaggctctcgatcctaaagttacctcttttggttttccaagattctctctgttgaagctctct 20505163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 99388 - 99494
Alignment:
Q  11 aaggtgtttaca-atgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||||| |||||| |||||| || ||||| ||| | |||||||   ||| | ||||||| ||||||||||||| |||||||||||| |||  ||    
T  99388 aaggtgtttacagatgttttccaacctaaaagaacctctcaccaaagacaaacaatcataaagtttcctcctttgatttatcaagtttctctatctcgaa 99487  T
Q  109 gctctct 115  Q
    |||||||    
T  99488 gctctct 99494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 221
Target Start/End: Complemental strand, 5571955 - 5571917
Alignment:
Q  183 atcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  5571955 atcgtgtcacgattggtgcgtacgacccaaggtacgacc 5571917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 6027224 - 6027038
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| || | || ||||||||||| ||||| ||||||| | ||    
T  6027224 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagcttcc-cctttgatttcccaagtctctctct-tcca 6027128  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgatt 196  Q
    | |||||| |  ||||||||| |||||||||||  ||  |||||||  | ||   |||||||||||| |||||||| ||||||||||||||    
T  6027127 acctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttccca-atcgtgtcacgatt 6027038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 21356268 - 21356301
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagaga 42  Q
    |||||||||||||||||||||| |||||||||||    
T  21356268 ccaaggtgtttacaatgtttcctaacccaagaga 21356301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 28137793 - 28137830
Alignment:
Q  183 atcgtgtcacgattgatgcgtacgatccaaggtacgac 220  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  28137793 atcgtgtcacgattgatgagtacgacccaaggtacgac 28137830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 4e-90; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 7762243 - 7762021
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7762243 ttcactcaccaaggtgttcacaatatttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctct 7762144  T
Q  101 ctct--tcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||  ||||||| || |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  7762143 ctctcttcaagctttccttcaaaatttgcaaagaacacttatatagcagtcttcagcgtctaaatcgtgtcacgtttttccccaatcgtgtcacgattga 7762044  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||||    
T  7762043 tgcgtacgacccaaggtacgacc 7762021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 45095142 - 45094921
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||| |||||||||||    
T  45095142 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcctcttttgatttcccaagtttctct 45095043  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcg-tcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgat 199  Q
    ||||||||||||   |||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  45095042 ctcttcaagctcatcttcaaaatctgcaaagaacacttatatagcaatcttcagcgttcgaaatcgtgtcacgtttttccccaatcgtgtcacgattgat 45094943  T
Q  200 gcgtacgatccaaggtacgacc 221  Q
    ||||||| ||||||||||||||    
T  45094942 gcgtacgttccaaggtacgacc 45094921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 5260514 - 5260734
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  5260514 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctct 5260613  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||| | |||||||||||||||||||||||||||| | |||||| ||||| ||||||||||| |||||||||  |||||| ||| |||||||    
T  5260614 ctcttcaagctcaccttcaaaatctgcaaagaacacttatatagctgtcttctgcgtcaaaatcgtgtcatgtttttccccaatcgtgccacaattgatg 5260713  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||||||||||| ||||||||    
T  5260714 cgtacgatccaaagtacgacc 5260734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 40734476 - 40734255
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||     
T  40734476 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttatctcctttgattttccaagtttctg 40734377  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| |||| ||||||||||| | ||| |||||| |||||||||    
T  40734376 tctcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaattgtgtcacgtttgt-ccaaatcgtgacacgattga 40734278  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    |||||||||||||||||||||||    
T  40734277 tgcgtacgatccaaggtacgacc 40734255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 5258335 - 5258555
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |  |||||||||||||||||||||||    
T  5258335 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagtttctccctttgatttctcaagtttctct 5258434  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||| ||||||| ||||||||||||||||||||| |||||| | |||||| ||||| |||||||||||||||||||||  |||||| ||| || ||||    
T  5258435 ctcttctagctctccttcaaaatctgcaaagaacacgtatatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacaatcgatg 5258534  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||||||| ||||||||||||    
T  5258535 cgtacgattcaaggtacgacc 5258555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 9636317 - 9636539
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||| | |||||||||||| ||||||||||    
T  9636317 ttcactcaccaaggtgtttacaatatttcccaacccaagagagactctaatcaaagaccctaaaccctaaagtttcttcctttgatttcccaagtttctc 9636416  T
Q  100 tctcttcaagctctct-ttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||| | ||| || |||||||||||||||||||||||||||| | | |||| ||||| |||||||||||||||||||||  |||||| |||||||||    
T  9636417 tctcttccaactcactcttcaaaatctgcaaagaacacttatatagctgccttctgcgtcaaaatcgtgtcacgtttttccccaatcgtgccacgattga 9636516  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    |||||||||||||||||||||||    
T  9636517 tgcgtacgatccaaggtacgacc 9636539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 29813041 - 29812820
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| || |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29813041 ttcactcacccaatgtgtttacaatgcttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 29812942  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||| ||||  |||||||||| ||||||||||||||||| ||||||||||| ||| |||||||||||||||||| ||| |||||| |||| |||     
T  29812941 tctcttcaacctcttcttcaaaatctacaaagaacacttatatagcagtcttcagcggtcaaaatcgtgtcacgttttt-ccaaatcgtgacacgtttgg 29812843  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||||    
T  29812842 tgcgtacgacccaaggtacgacc 29812820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 7764445 - 7764209
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  7764445 ttcactcaccaaggtgtttacaatgtttcctaacccaagagaaatctaatcaaagaccctcaactctaaagttacctcctttgatttcccaagtttctct 7764346  T
Q  101 ctcttcaa----------------gctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagat 184  Q
    ||||||||                |||||| |||||||| ||||||||||||||||||| ||||||||||| || |||||||||||||||||||||  ||    
T  7764345 ctcttcaactctaatgtttacaatgctctccttcaaaatttgcaaagaacacttatatagcagtcttcagcatctaaatcgtgtcacgtttttccccaat 7764246  T
Q  185 cgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    | ||||||||||||||||||||| |||||||||||||    
T  7764245 catgtcacgattgatgcgtacgacccaaggtacgacc 7764209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 29810846 - 29810625
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||    
T  29810846 ttcactcacccaaggtgtttacaatgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaaaattacctcctttgatttcccaagtttttc 29810747  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    | ||||||| || |  |||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||||| |||||| |||| |||     
T  29810746 tttcttcaaccttttcttcaaaatatgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttgg 29810648  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||||    
T  29810647 tgcgtacgacccaaggtacgacc 29810625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 51398792 - 51398585
Alignment:
Q  1 ttcactca-ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||     
T  51398792 ttcactcatccaaggtgtttacaatatttcccaacccaagaaaactctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagtttcta 51398693  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||| || |||||||| ||| ||||||||||||  |||||||| |||||| |||| |||     
T  51398692 tctcttcaacctctccttcaaaatctacaaagaacacttatatagcaatcttcagctgtcaaaatcgtgtcac-attttcccaaatcgtgacacgtttgg 51398594  T
Q  199 tgcgtacga 207  Q
    |||||||||    
T  51398593 tgcgtacga 51398585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 37408436 - 37408216
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||||||    
T  37408436 ttcactcactaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccataaaccctaaagttgcctcctttgatttcccaagtttctct 37408337  T
Q  101 ctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    |||||||||||| | |||||||||| || ||||||||||||||| ||||||||||| |   ||||| ||| ||| |||  ||| |||||| |||||||||    
T  37408336 ctcttcaagctcaccttcaaaatcttcacaagaacacttatataccagtcttcagcagataaaatcttgttacgattt--ccaaatcgtgccacgattga 37408239  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    | ||||||| |||||||||||||    
T  37408238 tacgtacgacccaaggtacgacc 37408216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 5236646 - 5236868
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  5236646 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctccttcgatttcccaagtttctc 5236745  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtcttc-agcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattg 197  Q
    ||||||||||| |   ||||||||||||| ||||||||||| |||  |  || | || ||| ||||||||||||| |||| ||| |||||| |||| |||    
T  5236746 tctcttcaagccccacttcaaaatctgcacaagaacacttaaatagtaccctgcaagtgtcaaaatcgtgtcacg-ttttgccaaatcgtgacacgtttg 5236844  T
Q  198 atgcgtacgatccaaggtacgacc 221  Q
     ||||||||| |||||||||||||    
T  5236845 gtgcgtacgacccaaggtacgacc 5236868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 40592637 - 40592424
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   || ||||||||||||||||||    
T  40592637 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttca 40592539  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| | ||||||||| ||| |||||||||||||||| | ||| |||||| |||||||| || ||||    
T  40592538 agctctcattcaaaatctgcacaagaacacttatatagcggtcttcagctgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgtgtac 40592440  T
Q  206 gatccaaggtacgacc 221  Q
    ||||||||||||||||    
T  40592439 gatccaaggtacgacc 40592424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 32744617 - 32744732
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  32744617 ttcactcaccaatgtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttct 32744716  T
Q  101 ctcttcaagctctctt 116  Q
    ||||| ||||||||||    
T  32744717 ctcttgaagctctctt 32744732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 39032409 - 39032198
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||||||||||||| ||||||||||||| |||    ||||||| |||||||||||||||||||||||||   || |||||||||||||||||||    
T  39032409 ccaaggtgtttacaatgtttaccaacccaagagatctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttcaa 39032311  T
Q  109 gctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacg 206  Q
    |||||  ||||||| ||||| ||||||||||||||| || |||||||| ||| ||||||||||||| ||||  || |||||| |||||||| ||||||||    
T  39032310 gctctacttcaaaaactgcacaagaacacttatatagcaatcttcagctgtcaaaatcgtgtcacgatttt--caaatcgtggcacgattggtgcgtacg 39032213  T
Q  207 atccaaggtacgacc 221  Q
    | |||||||||||||    
T  39032212 acccaaggtacgacc 39032198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 47923759 - 47923546
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||||||||||||  |||    ||||||| ||||| |||||||||||||||||||   || ||||||||||||||||||    
T  47923759 ccaaggtgtttacaatgtttcccaacccaagagattctcactacaaagacactcaatcctaaagttacctcctttgtaatc-caagtttctctctcttca 47923661  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| || |||||||  ||| |||||||||||||||| | ||| |||||| ||||||||||||||||    
T  47923660 agctctccttcaaaatctgcacaagaacacttatatagcactcttcagttgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattgatgcgtac 47923562  T
Q  206 gatccaaggtacgacc 221  Q
     | |||||||||||||    
T  47923561 aacccaaggtacgacc 47923546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 1736159 - 1735946
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||| ||| |   | | ||||||| |||||||||||||||||||||||||   || ||||||||||||||| ||    
T  1736159 ccaaggtgtttacaatgtttcccaacccaatagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctctcca 1736061  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    | ||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||| | ||| |||||| |||||||| |||||||    
T  1736060 aactctccttcaaaatctgcataagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtac 1735962  T
Q  206 gatccaaggtacgacc 221  Q
     | |||||||||||||    
T  1735961 aacccaaggtacgacc 1735946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 221
Target Start/End: Complemental strand, 30709651 - 30709439
Alignment:
Q  2 tcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 101  Q
    |||||| |||||||||||||||||||||||||||||| |||       |||  ||| |||||| ||||||||||||||||||   || ||||||||| ||    
T  30709651 tcactccccaaggtgtttacaatgtttcccaacccaaaaga-------tcatcgacactcaactctaaagttacctcctttgtaatc-caagtttctgtc 30709560  T
Q  102 tcttcaagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgat 199  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||||| ||| |||||| |||||||| |    
T  30709559 tcttcaagctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttt-ccaaatcgtgacacgattggt 30709461  T
Q  200 gcgtacgatccaaggtacgacc 221  Q
    |||||||| |||||||| ||||    
T  30709460 gcgtacgacccaaggtaagacc 30709439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 16264580 - 16264792
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat--caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 106  Q
    |||||||||||||||||||||||||||||||||| | || ||  ||||||| |||||||||||||||||||||||||   || |||||||||||  ||||    
T  16264580 ccaaggtgtttacaatgtttcccaacccaagagatc-ctcattacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctcttacttc 16264677  T
Q  107 aagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgta 204  Q
    |||||||| ||||||| ||||| ||||||||||||||| ||||||||||| ||| ||||||||||||| |||  ||| |||||| |||||||| ||||||    
T  16264678 aagctctccttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgcttt--ccaaatcgtggcacgattggtgcgta 16264775  T
Q  205 cgatccaaggtacgacc 221  Q
    | | |||||||||||||    
T  16264776 ccacccaaggtacgacc 16264792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 8370344 - 8370132
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||| |||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   || ||||||||||||||||||    
T  8370344 ccaagatgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttca 8370246  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||  ||||||||||||| |||||| |||||||| ||||||||||  ||| |||||||||||||||||  ||| |||||| |||||||| |||||||    
T  8370245 agctcttcttcaaaatctgcacaagaacgcttatatagcagtcttcagttgtcaaaatcgtgtcacgtttt--ccaaatcgtgacacgattggtgcgtac 8370148  T
Q  206 gatccaaggtacgacc 221  Q
     | |||||||||||||    
T  8370147 aacccaaggtacgacc 8370132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 24695021 - 24694808
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   || ||| ||||||||||||||    
T  24695021 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caaatttctctctcttca 24694923  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||  ||||||||||||| ||||||||||||||| ||||||||||  ||| ||||||||| |||||| | ||| |||||| |||||||| |||||||    
T  24694922 agctcttcttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgttacgtttgt-ccaaatcgtgacacgattggtgcgtac 24694824  T
Q  206 gatccaaggtacgacc 221  Q
     | |||||||||||||    
T  24694823 aacccaaggtacgacc 24694808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 36029324 - 36029537
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||| ||||||||||||   || |||||||||||  |||||    
T  36029324 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaatttacctcctttgtaatc-caagtttctcttacttca 36029422  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| |||| ||||||||||||| | | | |||| |||||||| |||||||    
T  36029423 agctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaattgtgtcacgttttt-ctaaaccgtgacacgattggtgcgtac 36029521  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  36029522 gacccaaggtacgacc 36029537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 48438447 - 48438655
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||||| |||||| |  || | ||||||| |||||||||||||||||||||||||   || ||||||||||||| ||||    
T  48438447 ccaaggtgtttacaatgtttcccaacc-aagagatccttactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctattca 48438544  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| |||||||| |||| ||||||||||||||| |||||||| || ||  |||||||||||||||| | ||| |||||| |||||||| |||||||    
T  48438545 agctctccttcaaaatttgcacaagaacacttatatagcagtcttcggctgttaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtac 48438643  T
Q  206 gatccaaggtac 217  Q
    ||||||||||||    
T  48438644 gatccaaggtac 48438655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 40735352 - 40735254
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40735352 ccaaggtgtttacaatgtttcctaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttca 40735254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 23200327 - 23200479
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagag-aactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |  ||||||||||| ||||||||||    
T  23200327 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctc 23200426  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtcttc 152  Q
    ||||||| | ||||| ||||||||||||| || |||||||| ||| ||||||||    
T  23200427 tctcttccaactctc-ttcaaaatctgcacaaaaacacttaaataccagtcttc 23200479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 23198128 - 23198348
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagag-aactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |  ||||||||||  ||||||||||    
T  23198128 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctccctttgattttccaagtttctc 23198227  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtctt-cagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattg 197  Q
    ||||||| | ||||| ||||||||||||| ||||||||||| |||  |||||| ||  |   ||||||||||||| |||  ||| |||||||||||||||    
T  23198228 tctcttccaactctc-ttcaaaatctgcacaagaacacttaaatactagtcttccactgataaaatcgtgtcacgattt--ccaaatcgtgtcacgattg 23198324  T
Q  198 atgcgtacgatccaaggtacgacc 221  Q
     | ||||||   ||||||||||||    
T  23198325 gtacgtacgtcacaaggtacgacc 23198348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 27974807 - 27974599
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||| |||||||||| |   | | ||||||| |||||||||||||||||||||||||   || ||||||||||||||||||    
T  27974807 ccaaggtgtttacaatgtttcccgacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttca 27974709  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||| |   |||||||| |||  |||  ||| ||| ||||||||||||| |||||    
T  27974708 agctctccttcaaaatctgcacaagaacacttatataacagtcttcagctgataaaatcgtgccacaattt--ccaaatcatgtcacgattgatacgtac 27974611  T
Q  206 gatccaaggtac 217  Q
    || |||||||||    
T  27974610 gacccaaggtac 27974599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 39153560 - 39153656
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  39153560 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 39153656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 27026937 - 27027149
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||| | |||||||| |   | | ||||||| |||||||||||||||||||||||||   || ||||||| ||||||||||    
T  27026937 ccaaggtgtttacaatgtttccctatccaagagatcctcagtacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttttctctcttca 27027035  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||  ||||||||||||| ||||  ||||||||| ||||||||||| ||| |||||||||||||||||  ||| | |||| |||||||| |||||||    
T  27027036 agctcttcttcaaaatctgcacaagattacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt--ccaaaacgtggcacgattggtgcgtac 27027133  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  27027134 gacccaaggtacgacc 27027149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 44331523 - 44331360
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||| ||||||||||    
T  44331523 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaa----------ccctaaagttacctcctttgatttcccaagtttctc 44331434  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtt 174  Q
    |||| |||||||||| ||| |||||| ||||||||| ||||||| ||||||||||| ||| ||||| |||||||||    
T  44331433 tctc-tcaagctctccttc-aaatctacaaagaacatttatatagcagtcttcagctgtcaaaatcatgtcacgtt 44331360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 9581261 - 9581146
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||  |    
T  9581261 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcc 9581162  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  9581161 tctcttgaagttctct 9581146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 19684079 - 19684194
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||  |    
T  19684079 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcc 19684178  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  19684179 tctcttgaagttctct 19684194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 760825 - 760710
Alignment:
Q  1 ttcactca-ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||  |    
T  760825 ttcactcatccaaggtgtttataatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcc 760726  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  760725 tctcttgaagttctct 760710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 22835192 - 22835307
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||  |    
T  22835192 ttcactcacccaaggtgattacaatgtttcccaacacaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagttttcc 22835291  T
Q  100 tctcttcaagctctct 115  Q
    |||||| ||| |||||    
T  22835292 tctcttgaagttctct 22835307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 53921693 - 53921807
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||| |||||||||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||| ||||||||| ||||||| ||    
T  53921693 ttcactcacccaaggtttttacaatgttttccaacccaagaaaaccctaatcaaagactctcaaccctaaagttacctcatttgatttcccaagtttttc 53921792  T
Q  100 tctcttcaagctctc 114  Q
    |||||||||||||||    
T  53921793 tctcttcaagctctc 53921807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 29682337 - 29682241
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 96  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| |||||||    
T  29682337 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaatttaactcctttgatttcccaagttt 29682241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 37725906 - 37726118
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||| |||||||||| |||||||||| |   | | ||||||| ||||||||||||||| |||||||||   || ||||||||||||||||||    
T  37725906 ccaaggtgtttataatgtttccccacccaagagatcctcactacaaagacactcaaccctaaagtttcctcctttgtaatc-caagtttctctctcttca 37726004  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||| ||| ||||||||||| ||||||||||||||| |||| | |||| |   |||||||| ||||||||  ||| ||||||||||||||||| |||||    
T  37726005 agctcacttccaaaatctgcacaagaacacttatatagcagtttgcagctgataaaatcgtgccacgtttt--ccaaatcgtgtcacgattgatacgtac 37726102  T
Q  206 gatccaaggtacgacc 221  Q
    || |||| ||||||||    
T  37726103 gacccaatgtacgacc 37726118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 113
Target Start/End: Complemental strand, 32891072 - 32890968
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||  ||| |||  ||||||| ||    
T  32891072 ccaaggtgtttacaatgtttcccaccccaagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgactttccaaattttcctctcttgaa 32890973  T
Q  109 gctct 113  Q
    |||||    
T  32890972 gctct 32890968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 16498999 - 16498892
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||    |||||| ||    
T  16498999 ccaaggtgtttacaatgtttctcaacctaagagaactctaatcaaagaccctcaacccacaagttacctcctttgatttcccaagttgtcatctcttgaa 16498900  T
Q  109 gctctctt 116  Q
    ||||||||    
T  16498899 gctctctt 16498892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 9666657 - 9666771
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||||| ||||||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||||||| | ||| |||    
T  9666657 ttcactcacccaaggtgtttacaaatgtttcccaactgaagagaaccctaatcaaagaccctcaaccctaaagttacctcatttgatttccctagtgtct 9666756  T
Q  99 ctctcttcaagctct 113  Q
    ||||||| |||||||    
T  9666757 ctctcttgaagctct 9666771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 21711454 - 21711594
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   || |||||||||||||||||||    
T  21711454 caaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttcaa 21711552  T
Q  109 gctctctttcaaaatctgca-aagaacacttatataacagtct 150  Q
    |||||| ||||||||||||| ||||||||||| ||| ||||||    
T  21711553 gctctc-ttcaaaatctgcacaagaacacttacatagcagtct 21711594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 27038282 - 27038449
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||| |||||||||| |   | | ||||| | |||||||||||||||| ||||||||   || ||||||| ||||||||||    
T  27038282 ccaaggtgtttacaatgtttccctacccaagagatcctcactacaaaggcactcaaccctaaagttatctcctttgtaatc-caagtttttctctcttca 27038380  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtt 174  Q
    ||||||  |||||||||| || ||||||||||||||| ||||||||||| ||| |||||||||||||||    
T  27038381 agctcttcttcaaaatctacacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtt 27038449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 33386530 - 33386318
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||| |||||||||||| |   | | ||||||| |||||||||||||||  ||||||||   || ||||||||||||||||||    
T  33386530 ccaaggtgtttacaatgtttctcaacccaagagatcctcactacaaagacactcaaccctaaagttctctcctttgtaatc-caagtttctctctcttca 33386432  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||  | ||||||||||| ||||||||||| ||| ||||||||||| |   |||||||| |||  |||  ||| ||||||||||||||||| |||||    
T  33386431 agctctactccaaaatctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacaattt--ccaaatcgtgtcacgattgatacgtac 33386334  T
Q  206 gatccaaggtacgacc 221  Q
    || ||||| |||||||    
T  33386333 gacccaagatacgacc 33386318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 26386695 - 26386786
Alignment:
Q  24 tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctct 115  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||  ||||||| ||| |||||    
T  26386695 tgtttcccaacctaagagaactctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagttttcctctctttaagttctct 26386786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 23410519 - 23410741
Alignment:
Q  1 ttcactcac-caaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||   | | ||||||| |||||||||||||||  ||||||||   || |||||||||    
T  23410519 ttcactcactcaaggtgtttacaatgttttccaacccaagagaacctcactacaaagacactcaaccctaaagttctctcctttgcaatcccaagtttct 23410618  T
Q  99 ctctcttcaagctctctttc-aaaatctgcaaag-aacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgat 195  Q
    |||||||| ||||||| ||| |||| |||||||| |||||||||||| ||||||||||| ||| |||| |||||||| |||| ||| |||||| |||| |    
T  23410619 ctctcttc-agctctccttcaaaaaactgcaaagaaacacttatatagcagtcttcagctgtc-aaattgtgtcacg-ttttgccaaatcgtgacacggt 23410715  T
Q  196 tgatgcgtacgatccaaggtacgacc 221  Q
    || || | || | |||||||||||||    
T  23410716 tggtgtgaacaacccaaggtacgacc 23410741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 105
Target Start/End: Complemental strand, 5373191 - 5373096
Alignment:
Q  11 aaggtgtttac-aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    ||||||||||| |||||||||||||||||||||||  | | ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||    
T  5373191 aaggtgtttaccaatgtttcccaacccaagagaaccttcaccaaagactctcaaccttaaagttacctcctttgatttttcaagtttctctctctt 5373096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 8126861 - 8127074
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||| |||   | | ||||||| ||||||  ||||||||| | |||||   || |||||||||||||||  |    
T  8126861 ccaaggtgtttacaatgtttcccaacccaagaaaacctcactacaaagacactcaactgtaaagttactttctttgtaatc-caagtttctctctctaaa 8126959  T
Q  108 agctctctttcaaaatctgcaaa-gaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    | ||||| |||||||||||||||  |||||||||||| ||||||||| | ||| |||||||||||||||| | ||| |||||| |||| ||| || ||||    
T  8126960 aactctccttcaaaatctgcaaataaacacttatatagcagtcttcaactgtcaaaatcgtgtcacgtttgt-ccaaatcgtgacacggttggtgtgtac 8127058  T
Q  206 gatccaaggtacgacc 221  Q
    || ||||| |||||||    
T  8127059 gacccaagatacgacc 8127074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 221
Target Start/End: Original strand, 40844887 - 40845097
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||||||||||||| |||||||| ||| |   | | ||||||| |||||||||||||||||||||||||   ||| |||||||||| |||| ||    
T  40844887 caaggtgtttacaatgtttctcaacccaatagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatct-aagtttctctatcttaaa 40844985  T
Q  109 gctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacg 206  Q
     ||||| |||||||| |||| |||||||||  |||| |||||||||||  || |||| ||||||||||| | ||| |||||| |||||||| |||||||     
T  40844986 actctccttcaaaatttgcacaagaacact--tatagcagtcttcagctatctaaattgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtaca 40845082  T
Q  207 atccaaggtacgacc 221  Q
    | |||||||||||||    
T  40845083 acccaaggtacgacc 40845097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 35925709 - 35925880
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttac--ctcctttgatttctcaagtttctctctctt 105  Q
    |||||||||||||||||||||||||||||| ||| |   | | |||||||  ||||||||||||||||  ||||||||   || |||||||||||| |||    
T  35925709 ccaaggtgtttacaatgtttcccaacccaaaagatcctcactacaaagacattcaaccctaaagttacatctcctttgtaatc-caagtttctctcactt 35925807  T
Q  106 caagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttt 176  Q
     |||||| | ||||||| ||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  35925808 taagctcaccttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt 35925880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 6794570 - 6794435
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||| |||||||||   | | ||| ||| |||||||||||||||||||||||||   || |||||||||||||||  |    
T  6794570 ccaaggtgtttacaatgtttcccaactcaagagaacctcactacaatgacactcaaccctaaagttacctcctttgtaatc-caagtttctctctctaaa 6794472  T
Q  108 agctctctttcaaaatctgcaaag-aacacttatata 143  Q
    | ||||| |||||||||||||||| ||||||||||||    
T  6794471 acctctccttcaaaatctgcaaagaaacacttatata 6794435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 23392099 - 23392249
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||    ||||||| |||||||||||| ||  ||||||||   || |||||||||    
T  23392099 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaatttctctcctttgcagtcccaagtttct 23392198  T
Q  99 ctctcttcaagctctctttc-aaaatctgcaaag-aacacttatataacagt 148  Q
    |||||||| ||||||| ||| |||| |||||||| |||||||||||||||||    
T  23392199 ctctcttc-agctctccttcaaaaaactgcaaagaaacacttatataacagt 23392249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 27453191 - 27453400
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||||||||||||| ||||||||||||| | || |  | |||| ||||||||||||||| |||||||||   || |||||||||||||||||||    
T  27453191 ccaaggtgtttacaatgtttgccaacccaagagatc-ctcactacagacactcaaccctaaagttccctcctttgtaatc-caagtttctctctcttcaa 27453288  T
Q  109 gctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacg 206  Q
    |||||| ||||||| ||||| ||||||||||| | |  |||||||| | |   |||||||| |||| |||  ||| ||||||||||||||||| ||||||    
T  27453289 gctctc-ttcaaaaactgcacaagaacacttaaaaactagtcttcaactgataaaatcgtgccacgattt--ccaaatcgtgtcacgattgatacgtacg 27453385  T
Q  207 atccaaggtacgacc 221  Q
       ||||||||||||    
T  27453386 tcacaaggtacgacc 27453400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 29196627 - 29196706
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctct 115  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||  ||||||||    
T  29196627 caagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgtagctctct 29196706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 103
Target Start/End: Complemental strand, 801067 - 800973
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||||| || ||||||| |||| | |||||||||||| ||||||||||||||    
T  801067 caaggtgtttcccatgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagtttcttcctttgatttcccaagtttctctctc 800973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 221
Target Start/End: Complemental strand, 25929246 - 25929038
Alignment:
Q  14 gtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctc 112  Q
    ||||||||||||||| ||||| |||||||||   | | ||||||| |||||||||||||||||||||||||   ||| ||||||||||| |||||| |||    
T  25929246 gtgtttacaatgttttccaactcaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatct-aagtttctctcacttcaaactc 25929148  T
Q  113 tctttcaaaatctgcaaag-aacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatcc 210  Q
    |  |||||||||| ||||| ||||||||||||  | |||||||| ||| |||||||||||||  ||  ||| |||||  |||| ||| | ||||||||||    
T  25929147 tacttcaaaatctacaaagaaacacttatatagaaatcttcagctgtcaaaatcgtgtcacg-attggccaaatcgtaacacggttggtacgtacgatcc 25929049  T
Q  211 aaggtacgacc 221  Q
    || ||||||||    
T  25929048 aatgtacgacc 25929038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 32143554 - 32143767
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaac-tctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||| ||||||||||||| | ||    ||||||| |||||||||| |||| |||||||||   || ||| ||||||||||||||    
T  32143554 ccaaggtgtttacaatgttttccaacccaagagatcatcactacaaagacactcaaccctagagttccctcctttgtaatc-caaatttctctctcttca 32143652  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    | ||||| | ||||||||||| ||||||||||| |||  |||||||| | |   ||||||||||||| |||  ||| ||||||||||||||||| |||||    
T  32143653 a-ctctcctccaaaatctgcacaagaacacttaaatacaagtcttcaactgataaaatcgtgtcacgattt--ccaaatcgtgtcacgattgatacgtac 32143749  T
Q  206 gatccaaggtacgacctg 223  Q
    |   ||||||||||||||    
T  32143750 gtcacaaggtacgacctg 32143767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 44700718 - 44700795
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  44700718 caagataaccctaatcaaagaccatcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 44700795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 4386831 - 4386736
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctct 104  Q
    ||||||| |||||||||||||||||||||||||||   | | ||||||| |||||||||||||||||||||||||  || ||||||||||||||||    
T  4386831 caaggtgattacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtattttcaagtttctctctct 4386736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 172
Target Start/End: Complemental strand, 27986311 - 27986147
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| ||||||||||||||| |||||||||   || |||||||||||||||||     
T  27986311 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctttgtaatc-caagtttctctctcttcc 27986213  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacg 172  Q
    | ||||| ||| ||||||||| ||||||||||| ||| | |||||| || | | |||||||||||||    
T  27986212 aactctc-ttccaaatctgcacaagaacacttaaatacctgtcttctgcggacaaaatcgtgtcacg 27986147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 2075300 - 2075369
Alignment:
Q  40 agaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 110  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||||| ||||    
T  2075300 agaactctaatcaaagactctcaaccctaaagtta-ctcatttgatttcccaagtttctctctcttgaagc 2075369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 3715857 - 3715760
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||||||||||||||||||||||  ||||||||   | | |||||||  ||||||||||||||||||||||||  ||||||||||||||||||    
T  3715857 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacattcaaccctaaagttacctcctttgtattctcaagtttctctctc 3715760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 3323546 - 3323471
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttg 83  Q
    ||||||||||||||||||||||||||||||||||| |||     |||||| |||||||||||||||||||||||||    
T  3323546 ccaaggtgtttacaatgtttcccaacccaagagaacctcactataaagacactcaaccctaaagttacctcctttg 3323471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 220
Target Start/End: Original strand, 44331735 - 44331857
Alignment:
Q  98 tctctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgatt 196  Q
    |||||||| |||||||| ||||||||||||||| ||||| |||||| ||||||||||| ||| ||||| || |||| ||| |||| |||||| |||  ||    
T  44331735 tctctctttaagctctccttcaaaatctgcaaataacacatatatagcagtcttcagctgtcaaaatcatgccacg-tttccccaaatcgtgacacattt 44331833  T
Q  197 gatgcgtacgatccaaggtacgac 220  Q
    | || |||||| ||||||||||||    
T  44331834 ggtgtgtacgacccaaggtacgac 44331857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 153
Target Start/End: Complemental strand, 26928454 - 26928310
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||||||||||||  |||    ||||||| |||||||||| |||| |||| ||||   || ||||||| ||||||||||    
T  26928454 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctagagttccctcgtttgtaatc-caagtttttctctcttca 26928356  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttca 153  Q
    | ||||| | ||||||||||| ||||||||||| |||  ||||||||    
T  26928355 a-ctctcctccaaaatctgcacaagaacacttaaatacaagtcttca 26928310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 6716476 - 6716290
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| ||||||  ||||||||||| ||||| |||||||||||     
T  6716476 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttactccctttgatttcccaagtctctctctcttcc 6716378  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgat 195  Q
    | | || | |  ||||||||| |||||||||| ||||  |||||||  | || |||||||||||||| |||| ||| |||||||||||||    
T  6716377 aaccctttcttcaaatctgcacaagaacactt-tatactagtcttcctctgttgaaatcgtgtcacgatttt-ccaaatcgtgtcacgat 6716290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 26299219 - 26299329
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||||||||||||  |||    |||||||  ||||||||||||||||||||||| ||    |||||||||||||||  |    
T  26299219 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacattcaaccctaaagttacctccttt-ataatccaagtttctctctctaaa 26299317  T
Q  108 agctctctttca 119  Q
    ||||||| ||||    
T  26299318 agctctccttca 26299329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 113
Target Start/End: Original strand, 40519446 - 40519501
Alignment:
Q  58 cctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||||| |||||||    
T  40519446 cctcaaccctaaaattatctcatttgatttctcaagtttctctctcttgaagctct 40519501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 1417341 - 1417271
Alignment:
Q  14 gtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 83  Q
    ||||||||||||||||||||||||||| |||   | | ||||||| |||||||||||||||||||||||||    
T  1417341 gtgtttacaatgtttcccaacccaagataacctcactacaaagacactcaaccctaaagttacctcctttg 1417271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 6718660 - 6718563
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 106  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| ||||||  ||||||||||| ||||| |||||||||||    
T  6718660 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttactccctttgatttcccaagtctctctctcttc 6718563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 47649801 - 47649898
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||||||||||||||||||||||  ||||||||   | | ||||||| |||||||||||||||| ||||||||  ||| ||||||||| ||||    
T  47649801 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccctaaagttatctcctttgtattcccaagtttctatctc 47649898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 7782375 - 7782470
Alignment:
Q  44 ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgca-aagaacactta 139  Q
    |||||||||||||| || || |||| ||||||  ||||||||||| ||||||||||||||||| | || || ||| ||||||||| |||||||||||    
T  7782375 ctctaatcaaagactctaaaacctagagttactccctttgatttcccaagtttctctctcttccaactgtccttc-aaatctgcacaagaacactta 7782470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 3328212 - 3328106
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||| |||||||||||||| |||    |||||||  ||||||||||||||| |||||||    || |||||||||||||||  |    
T  3328212 ccaaggtgtttacaatgttttccaacccaagagaagctcactacaaagacattcaaccctaaagttatctcctttctaatc-caagtttctctctctaaa 3328114  T
Q  108 agctctct 115  Q
    ||||||||    
T  3328113 agctctct 3328106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 138
Target Start/End: Complemental strand, 54635101 - 54634971
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||| ||||| |||||||||||     
T  54635101 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctctcttcc 54635003  T
Q  108 agctctctttcaaaatctgca-aagaacactt 138  Q
    | ||| || |  ||||||||| ||||||||||    
T  54635002 aactccctcttcaaatctgcacaagaacactt 54634971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 25637404 - 25637308
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 106  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| || |||| ||||||||||| ||||| |||||||||||    
T  25637404 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagatacc-cctttgatttcccaagtctctctctcttc 25637308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 25796011 - 25796108
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    |||||||||||||| |||||||||||||  |||||| |   | | ||||||| ||||||||| |||||||||||||||  ||| ||||||||||||||    
T  25796011 ccaaggtgtttacattgtttcccaaccctcaagagagcctcactacaaagacactcaaccctcaagttacctcctttgtattcccaagtttctctctc 25796108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 54740019 - 54740073
Alignment:
Q  51 caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    |||||||  ||||||||||||||||||||||| |||||| |||||||| ||||||    
T  54740019 caaagactttcaaccctaaagttacctcctttaatttcttaagtttctttctctt 54740073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 8166705 - 8166754
Alignment:
Q  56 accctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    ||||||||||||||||||||||| ||| ||||| ||| ||||||||||||    
T  8166705 accctcaaccctaaagttacctcattttatttcccaaatttctctctctt 8166754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 105
Target Start/End: Original strand, 51352378 - 51352423
Alignment:
Q  60 tcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||    
T  51352378 tcaaccctaaaattacctcctttgatttccgaagtttctctctctt 51352423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31314423 - 31314379
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaac 44  Q
    |||||||||| || |||||||||||||||||||||||||||||||    
T  31314423 ttcactcacccaaagtgtttacaatgtttcccaacccaagagaac 31314379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 29100408 - 29100493
Alignment:
Q  22 aatgtttcccaacccaagaga---actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctct 104  Q
    |||||||||||||| |||| |   ||||| | ||||||| |||||||||||| || ||||||||| |||| ||||||||| |||||    
T  29100408 aatgtttcccaacctaagaaataaactctcaccaaagacactcaaccctaaacttccctcctttggtttcccaagtttctttctct 29100493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 37761710 - 37761784
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 110  Q
    |||||||||||| | ||||||| ||||| | ||||||||  || |||||||| ||||||| ||||||||| ||||    
T  37761710 caagagaactctcaccaaagactctcaatcttaaagttatttcttttgatttttcaagttactctctcttgaagc 37761784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 7167480 - 7167578
Alignment:
Q  9 ccaaggtgtttacaatgttt---cccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctct 104  Q
    |||||||| |||||||||||   |||||||||||||| ||||| | ||||||| |||||||||   ||| ||||||||| | || |||||||||||||||    
T  7167480 ccaaggtgattacaatgttttttcccaacccaagagacactctcaacaaagacactcaaccctttggttccctcctttgttatc-caagtttctctctct 7167578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 31340610 - 31340671
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||| ||||||| ||| || | ||||||||||| ||| ||||||||| |||||||||||||    
T  31340610 aaatcatgtcacgatttcccaaaatcgtgtcacgtttggtgcgtacgacccaaggtacgacc 31340671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 34490737 - 34490700
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgattg 197  Q
    |||||||||||||||||||| | |||||||||||||||    
T  34490737 aaatcgtgtcacgtttttccaaaatcgtgtcacgattg 34490700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 39153742 - 39153779
Alignment:
Q  183 atcgtgtcacgattgatgcgtacgatccaaggtacgac 220  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  39153742 atcgtgtcacgattgatgagtacgacccaaggtacgac 39153779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 43404302 - 43404362
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||||||||||| ||| |||| |||||| |||| ||| ||||||||| |||||||||||||    
T  43404302 aaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgacc 43404362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 44331892 - 44331929
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgattg 197  Q
    |||||||||||||||||||| | |||||||||||||||    
T  44331892 aaatcgtgtcacgtttttccaaaatcgtgtcacgattg 44331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4178752 - 4178532
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  4178752 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttctcaagtttctct 4178653  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||| | ||||||||||||||||||||||| |||| | |||||| ||||| |||||||||||||||||||||  ||| || |||||||||||    
T  4178652 ctcttcaagctcaccttcaaaatctgcaaagaacacttttatagctgtcttctgcgtcaaaatcgtgtcacgtttttccccaatcttgccacgattgatg 4178553  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||||||||||||||||||||    
T  4178552 cgtacgatccaaggtacgacc 4178532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 23555017 - 23554797
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||    
T  23555017 ttcactcaccaaggtgtttacaatgtttcccaactcaagagaactctaatcaaagaccttcaaccctgaagttacctcctttgatttcccaagtttctct 23554918  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |    ||||||||||||||||||    
T  23554917 ctcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcagcgtcaaaatcgtgtcacgttttccattaatcgtgtcacgattgatg 23554818  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    ||||||| |||| ||||||||    
T  23554817 cgtacgacccaatgtacgacc 23554797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 24514951 - 24515171
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||||||||||    
T  24514951 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctct 24515050  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||| | |||||||||||||||||||||||||||| | |||||| ||||| |||||||||| ||||||||||  |||||| |||||||||||    
T  24515051 ctcttcaagctccccttcaaaatctgcaaagaacacttatatagctgtcttctgcgtctaaatcgtgtcgcgtttttccccaatcgtgccacgattgatg 24515150  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||||||||||||||||||||    
T  24515151 cgtacgatccaaggtacgacc 24515171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 29991032 - 29990814
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||||    
T  29991032 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgtctcctttgatttcccaagtttctct 29990933  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||| ||| | |||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||  |||||| |||||||||||    
T  29990932 ctcttcaaactcaccttcaaaatctgcaaagaacacttatatagcaatcttcagcgtcgaaatcgtgtcacatttttccccaatcgtgccacgattgatg 29990833  T
Q  201 cgtacgatccaaggtacga 219  Q
    |||||||  ||||||||||    
T  29990832 cgtacgactcaaggtacga 29990814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 35853892 - 35853670
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |  |||||||||||  ||||||||||    
T  35853892 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactcaaatcaaagaccctaaaccctaaagttgctacctttgatttcctaagtttctct 35853793  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgttttt--cccagatcgtgtcacgattga 198  Q
    |||||||||||||  |||||||||||||||||||||||||||| | |||||| ||||| ||||||||||||||||||  | |  |||||| |||||||||    
T  35853792 ctcttcaagctcttcttcaaaatctgcaaagaacacttatatagctgtcttctgcgtcaaaatcgtgtcacgtttttttctccaatcgtgccacgattga 35853693  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    |||||||||||||||||||||||    
T  35853692 tgcgtacgatccaaggtacgacc 35853670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 2761492 - 2761713
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| ||||||| ||    
T  2761492 ttcactcacccaatgtgtttacaatgtttcccaacccaagagaactctaatcaaatatcatcaaccctaaagttacctcctttgatttcccaagtttatc 2761591  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||| |||||||| |||||| |||| |||     
T  2761592 tctcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttgg 2761690  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||||    
T  2761691 tgcgtacgacccaaggtacgacc 2761713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14070023 - 14070244
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  14070023 ttcactcacccaaggtgtttacaatgttacccaacccaagagaactctaatcaaagaccctcagccctaaagttacctcctttgatttcccaagtttctc 14070122  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||||| ||| || |||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| |||||| |||| |||     
T  14070123 tctcttcaagccctcctttaaaatcggcaaagaacacttatataacagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttgg 14070221  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||| ||||| |||||||||||||    
T  14070222 tgcatacgacccaaggtacgacc 14070244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14380051 - 14380272
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  14380051 ttcactcacccaaggtgtttacaatgttacccaacccaagagaactctaatcaaagaccctcagccctaaagttacctcctttgatttcccaagtttctc 14380150  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||||||| ||| || |||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| |||||| |||| |||     
T  14380151 tctcttcaagccctcctttaaaatcggcaaagaacacttatataacagtcttcagctgtcaaaatcgtgtcacg-ttttcccaaatcgtgacacgtttgg 14380249  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||| ||||| |||||||||||||    
T  14380250 tgcatacgacccaaggtacgacc 14380272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 18126622 - 18126401
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18126622 ttcactcacccaagttgtttacaatgtttcccaacccatgagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 18126523  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||| ||||||||||  |||||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||||| ||||| || |||||| |||| |||     
T  18126522 tctattcaagctcttcttcaaaatctgcaaagaacacttatatatcagtctttagctgtcaaaatcgtgtcacg-ttttctcaaatcgtgacacgtttgg 18126424  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||||    
T  18126423 tgcgtacgacccaaggtacgacc 18126401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 47676326 - 47676547
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  47676326 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagtttctc 47676425  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    |||||||||||||   |||||||||||||||||||||||||||| ||||||||| | ||| |||| |||||||| |||||| | |||||| |||| |||     
T  47676426 tctcttcaagctcctcttcaaaatctgcaaagaacacttatatatcagtcttcaactgtcaaaattgtgtcacg-ttttccaaaatcgtgacacgtttgg 47676524  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||||    
T  47676525 tgcgtacgacccaaggtacgacc 47676547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 4586130 - 4585918
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||| |    
T  4586130 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagagcctcaaccctaaagttacatcctttgatttcccaagtttttctctcttcta 4586031  T
Q  109 gctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacga 207  Q
     ||||| |||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||  |||||||| |||||| || | ||| |||||||||    
T  4586030 actctccttcaaaatctgcaaagaacacttatataacagtctttagctgtcaaaatcgtgtcac-attttcccaaatcgtgacatgtttggtgcgtacga 4585932  T
Q  208 tccaaggtacgacc 221  Q
     |||||||||||||    
T  4585931 cccaaggtacgacc 4585918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 1113635 - 1113413
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  1113635 ttcactcacccaagttgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacttcctttgatttcccaagtttctc 1113536  T
Q  100 tctcttcaagctctctttcaaaatctgcaaag-aacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattg 197  Q
    ||||||||| ||||  ||||||||||||| || ||||||||||||||||| |||||| ||| ||||||||||||||||| || | | |||| |||| |||    
T  1113535 tctcttcaacctcttcttcaaaatctgcacagaaacacttatataacagtattcagctgtcaaaatcgtgtcacgttttgccaata-cgtgacacgtttg 1113437  T
Q  198 atgcgtacgatccaaggtacgacc 221  Q
     ||||||||| |||||||||||||    
T  1113436 gtgcgtacgacccaaggtacgacc 1113413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 30024922 - 30025099
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||| ||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30024922 ttcactcacccaaggtgtttacaacgtttttcaacctaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 30025021  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttt 176  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  |||||||||| ||| |||||||||||||||||    
T  30025022 tctcttcaagctctcattcaaaatctgcaaagaacacttatatagtagtcttcagctgtcaaaatcgtgtcacgtttt 30025099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 19502154 - 19502013
Alignment:
Q  2 tcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  19502154 tcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcatttgatttctcaagtttgtctc 19502055  T
Q  102 tcttcaagctctctttcaaaatctgcaaagaacacttatata 143  Q
    |||| |||||||| |||||||||||||||||||| |||||||    
T  19502054 tctttaagctctccttcaaaatctgcaaagaacatttatata 19502013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 31733159 - 31733359
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  31733159 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaactctaaagttacctcttttgatttctcaagtttctc 31733258  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgat 199  Q
    ||||||| |||| |  |||||||||||||||||||||||||||| |||||||||      ||||||||||||| |||||||| |||||  |||| ||| |    
T  31733259 tctcttccagcttttcttcaaaatctgcaaagaacacttatatagcagtcttca------aaatcgtgtcacg-ttttcccaaatcgttacacgtttggt 31733351  T
Q  200 gcgtacga 207  Q
    ||||||||    
T  31733352 gcgtacga 31733359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 47674133 - 47674354
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||| ||||||||||    
T  47674133 ttcactcacccaaggtgtttacaatgttttccaacccaagagaactctaatcaaagaccttcaaccttgaagttacctcctttgatttcccaagtttctc 47674232  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    |||||||||||||   ||||||||||||||||||||| |||||| ||||||||||| ||| ||||| ||||| | |||||| | |||||| |||| |||     
T  47674233 tctcttcaagctcctcttcaaaatctgcaaagaacacctatatagcagtcttcagctgtcaaaatcatgtcatg-ttttccaaaatcgtgacacgtttgg 47674331  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||| | |||||||||||||    
T  47674332 tgcgtacaacccaaggtacgacc 47674354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 10 - 221
Target Start/End: Complemental strand, 26417284 - 26417070
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaag 109  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  26417284 caaggtgtttacaatgtttcccaatccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtt--tatctcttcaag 26417187  T
Q  110 ctctctttcaaaatctgcaaag-----aacacttatataacagtcttc-agcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgt 203  Q
    ||||  ||||||||||||||||     |||||||||||| |||||||| | |||| |||||||||||||  ||  ||| |||||| |||| ||| |||||    
T  26417186 ctcttcttcaaaatctgcaaagaaattaacacttatatagcagtcttcaaccgtcaaaatcgtgtcacg-attggccaaatcgtgacacggttggtgcgt 26417088  T
Q  204 acgatccaaggtacgacc 221  Q
    |||| |||||||||||||    
T  26417087 acgacccaaggtacgacc 26417070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 43864222 - 43864080
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43864222 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctc 43864123  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatat 142  Q
    |||||||||||| |  |||||||||| ||||||||||||||||    
T  43864122 tctcttcaagctattcttcaaaatctacaaagaacacttatat 43864080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 48491557 - 48491335
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  48491557 ttcactcacccaaagtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttatcaagtttctc 48491458  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattg 197  Q
    ||||||||| ||||  ||||||||||||| ||||||||||| |||  |  || || |  || ||||| ||||||| |||| ||| |||||| |||| |||    
T  48491457 tctcttcaacctcttcttcaaaatctgcacaagaacacttaaatagtaccctgcaactatcaaaatcatgtcacg-ttttgccaaatcgtgacacggttg 48491359  T
Q  198 atgcgtacgatccaaggtacgacc 221  Q
     ||||||||| |||||||||||||    
T  48491358 gtgcgtacgacccaaggtacgacc 48491335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 48489409 - 48489187
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  48489409 ttcactcacccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccatcaaccctaaagttacctcctttgatttcccaagtttctc 48489310  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattg 197  Q
    | ||||||| ||||  ||||||||||||| ||||||||||| |||  |  || || | ||| ||||| ||||||| |||| ||| |||||| ||||||||    
T  48489309 tatcttcaatctcttcttcaaaatctgcacaagaacacttaaatagtaccctgcaactgtcaaaatcatgtcacg-ttttgccaaatcgtgacacgattg 48489211  T
Q  198 atgcgtacgatccaaggtacgacc 221  Q
     ||||||| | |||||||| ||||    
T  48489210 gtgcgtacaacccaaggtatgacc 48489187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 49091920 - 49092134
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||| |||||||||||||||||||| | |   | | ||||||| ||||||| |||||||||||||||||   || ||||||||||||||||||    
T  49091920 ccaaggtgttttcaatgtttcccaacccaagatatcctcagtacaaagacactcaaccttaaagttacctcctttgtaatc-caagtttctctctcttca 49092018  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||||||   || |||||||||| |||| ||| |||    
T  49092019 agctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgttcaaatcgtgtcactattggtgcatac 49092118  T
Q  206 gatccaaggtacgacc 221  Q
    ||||||||||||||||    
T  49092119 gatccaaggtacgacc 49092134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 39731354 - 39731215
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||  ||||||||||| ||||||||||    
T  39731354 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagtttctc 39731255  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacactta 139  Q
    ||||||| | ||||| ||||||||||||| |||||||||||    
T  39731254 tctcttccaactctc-ttcaaaatctgcacaagaacactta 39731215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 4538730 - 4538962
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| |||| ||||||||||||||||| |||||||||     
T  4538730 ttcactcacccaaggtgtttacaatttttcccaacccaagagaattctaatcaaagactctcaaccttaaaattacctcctttgatttcccaagtttctg 4538829  T
Q  100 tctcttcaagctctct----------ttcaaaatctgcaaag-aacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgt 187  Q
     |||||| | ||||||          |||||||||||||||| |||||||||||| ||||||| ||| ||| |||||||||||   |||| ||| |||||    
T  4538830 cctcttccacctctcttgaactatccttcaaaatctgcaaagaaacacttatatagcagtctttagctgtcaaaatcgtgtca-tattttgccaaatcgt 4538928  T
Q  188 gtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    | |||| ||| |||||||||||||||||||||||    
T  4538929 gacacgtttggtgcgtacgatccaaggtacgacc 4538962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 21989139 - 21989349
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| ||||| |||||||||||||||||||   || |||||||||||| |||||    
T  21989139 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaacctaaagttacctcctttgtaatc-caagtttctctcacttca 21989237  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||| ||||  ||| ||| || |||||||| ||||||     
T  21989238 agctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacatttt--ccaaatcatgacacgattgctgcgtat 21989335  T
Q  206 gatccaaggtacga 219  Q
    || |||||||||||    
T  21989336 gacccaaggtacga 21989349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 38671421 - 38671527
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||| ||    
T  38671421 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaa 38671520  T
Q  109 gctctct 115  Q
    | |||||    
T  38671521 gttctct 38671527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 6570561 - 6570352
Alignment:
Q  11 aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 110  Q
    |||||||||||||||||||||| ||||||||||| ||| |||||||| ||||| ||||||||||||||||||||||||||||||||  | ||||| ||||    
T  6570561 aaggtgtttacaatgtttcccaccccaagagaaccctagtcaaagacactcaatcctaaagttacctcctttgatttctcaagttttcccctctttaagc 6570462  T
Q  111 tctctttcaaaatctgcaaag-aacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgat 208  Q
    |||| |||||||| ||||||| |||||||| | || ||| |||||  ||| ||| |||||||||  ||  ||| |||||| |||| |||||||||| ||     
T  6570461 tctccttcaaaatatgcaaagaaacacttaaacaatagttttcagttgtcaaaaacgtgtcacg-attggccaaatcgtgacacggttgatgcgtatgac 6570363  T
Q  209 ccaaggtacga 219  Q
    |||||||||||    
T  6570362 ccaaggtacga 6570352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 48408780 - 48408629
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagag-aactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |  ||||||||||| ||||||||||    
T  48408780 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctc 48408681  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtcttc 152  Q
    |||||||  |||||| ||||||||||||| ||||||||||| |||  |||||||    
T  48408680 tctcttc-cgctctc-ttcaaaatctgcacaagaacacttaaatactagtcttc 48408629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 176
Target Start/End: Complemental strand, 46516171 - 46516005
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||| ||||||| |   | | ||||||| |||||||||||||||||||||||||   || |||||||||||||||  |    
T  46516171 ccaaggtgtttacaatgtttcccaactcaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctct--a 46516075  T
Q  108 agctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttt 176  Q
    ||||| | |||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  46516074 agctccccttcaaaatctgcaaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt 46516005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 31105583 - 31105696
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  31105583 ttcactcacccaaggtgtttacaatgtttctcaccccaagataactataatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttttcc 31105682  T
Q  100 tctcttcaagctct 113  Q
    |||||| |||||||    
T  31105683 tctcttgaagctct 31105696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 25767148 - 25767296
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||||||||||||||||||||||||||    |||||| ||||||||||||||||| ||||||| |||| |  ||||||||||||||||||||||    
T  25767148 ttcactcaccaaggtgtttacaatgtttcccaa----agagaaactctaatcaaagaccctaaaccctagagttgctccctttgatttctcaagtttctc 25767243  T
Q  100 tctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtcttc 152  Q
    ||||||| ||||||| ||||||||||||| ||||||||||| |||  |||||||    
T  25767244 tctcttc-agctctccttcaaaatctgcacaagaacacttaaatactagtcttc 25767296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 138 - 221
Target Start/End: Complemental strand, 19495811 - 19495728
Alignment:
Q  138 tatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19495811 tatatatcagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgacccaaggtacgacc 19495728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 33332316 - 33332103
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||| ||||||||||||||| ||||||||||||||  || | |||| || |||||||||||||||||||||||||   || ||||||||| |||||  |    
T  33332316 ccaagatgtttacaatgtttctcaacccaagagaaccttactacaaaaacactcaaccctaaagttacctcctttgtaatc-caagtttctatctctcaa 33332218  T
Q  108 agctctctttcaaaatctgcaaag-aacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| |||||||||||||||| |||||| ||||| ||||||||| | ||| ||||||||||||  || | ||| |||||| |||||||| |||||||    
T  33332217 agctctccttcaaaatctgcaaagaaacactaatatagcagtcttcaactgtcaaaatcgtgtcacaattgt-ccaaatcgtgacacgattggtgcgtac 33332119  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  33332118 gacccaaggtacgacc 33332103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24526087 - 24526201
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||||||||||| | ||||| ||    
T  24526087 ttcactcacccaaggtgtttacaatgtttcccaacctaagagaaccataatcaaagaccctcaaccctaaagttatctcctttgatttccctagtttttc 24526186  T
Q  100 tctcttcaagctctc 114  Q
    |||||| ||||||||    
T  24526187 tctcttgaagctctc 24526201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 44847991 - 44847779
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| ||||||||||||||||||||||||    || ||||||||||||||||||    
T  44847991 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttataatc-caagtttctctctcttca 44847893  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||    |||||||| || ||||||||||||||| | ||||||||| |   |||||||| ||||||||  ||| |||||| |||||||||| |||||    
T  44847892 agctcttcaccaaaatctacacaagaacacttatatagccgtcttcagctgataaaatcgtgccacgtttt--ccaaatcgtgccacgattgatacgtac 44847795  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  44847794 gacccaaggtacgacc 44847779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 2647563 - 2647350
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||| |||| |||||||||||||||||||| |   | | ||||||| |||||||||||||||| ||||||||   || |||||||||||||||  |    
T  2647563 ccaaggtgcttaccatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttatctcctttgtagtc-caagtttctctctctaaa 2647465  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagcg-tcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    | ||||| ||||||||||||| |||||||||| |||| |||||||||||  || ||||||| |||||||| ||| | |||||| |||||||| |||||||    
T  2647464 atctctccttcaaaatctgcacaagaacacttttatagcagtcttcagctctcaaaatcgtatcacgtttgtccaa-atcgtgacacgattggtgcgtac 2647366  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  2647365 gacccaaggtacgacc 2647350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36574705 - 36574811
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  36574705 ttcactcacctaaggtgtttacaaatgttttccaacccaagagaaccctcatcaaagaccgtcaaccctaaagttacctcctttgatttctcaattttct 36574804  T
Q  99 ctctctt 105  Q
    |||||||    
T  36574805 ctctctt 36574811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 496173 - 496269
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 96  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  496173 ttcactcacccaaggtttttacaatgtttcccaatccaagagaactctaatcaaagaccctcaaccttaaagttacctcatttgatttcccaagttt 496269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 2479567 - 2479779
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatc-aaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | |  |||||| ||||||||||||||| |||||||||   || ||||||||||||||||||    
T  2479567 ccaaggtgtttacaatgtttcccaacccaagagatcctcactataaagacactcaaccctaaagttccctcctttgtaatc-caagtttctctctcttca 2479665  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||  | ||||||||||| |||||||||||||||  |||||||| | |   |||||||| ||||||||  ||| ||| || || |||||||||||||    
T  2479666 agctcttctccaaaatctgcacaagaacacttatatactagtcttcaactgataaaatcgtgccacgtttt--ccaaatcatgccatgattgatgcgtac 2479763  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  2479764 gacccaaggtacgacc 2479779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4253719 - 4253830
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||| || | |||| ||||||||||||||||||||||||||||||||| |||||||||    
T  4253719 ttcactcacctaaggtgtttacaaatgttttccaacccaagagaaccctcaccaaataccctcaaccctaaagttacctcctttgatttcccaagtttct 4253818  T
Q  99 ctctcttcaagc 110  Q
    ||||||| ||||    
T  4253819 ctctcttaaagc 4253830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 25615832 - 25615726
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||  ||||||  ||||||| ||    
T  25615832 ccaaggtgtttacaatgttttccaacccaagagaactctaatcaaagacccttaaccttaaagttaactcctttgatttcctaagttttcctctcttgaa 25615733  T
Q  109 gctctct 115  Q
    | |||||    
T  25615732 gttctct 25615726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 41649209 - 41649314
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||| ||||||||||||| |||||||  ||||||| ||    
T  41649209 ccaaggtgtttacaatgtttcccaacccaagagaactctaataaaaga-ccttaaccctaaagttaactcctttgatttcccaagttttgctctcttgaa 41649307  T
Q  109 gctctct 115  Q
    | |||||    
T  41649308 gttctct 41649314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 41317673 - 41317750
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||    
T  41317673 caagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctct 41317750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 31518773 - 31518658
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| ||||||||||| |||||| ||||||||| |||||  |||||||||||||| ||||||||||||| |||||||||||||  ||||||  |    
T  31518773 ttcactcacccaaggtgtttacgatgttttccaacccaaaagaaccataatcaaagacccttaaccctaaagttatctcctttgatttccaaagttttcc 31518674  T
Q  100 tctcttcaagctctct 115  Q
    |||||| |||||||||    
T  31518673 tctcttgaagctctct 31518658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 12098098 - 12098175
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  12098098 caagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagctct 12098175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 133
Target Start/End: Original strand, 2580621 - 2580744
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    |||||||||||||||||||| |||||||||||||||   |  ||||||| |||||||||||||||||||||||||   || |||||||||||||||  ||    
T  2580621 ccaaggtgtttacaatgttttccaacccaagagaacctcacacaaagacactcaaccctaaagttacctcctttgcaatc-caagtttctctctctaaaa 2580719  T
Q  109 gctctctttcaaaatctgcaaagaa 133  Q
     ||||  ||||||||||||||||||    
T  2580720 cctctacttcaaaatctgcaaagaa 2580744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 20284320 - 20284455
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    ||||||||||||||||||||||||||||||||||| |||    ||||||| |||||||||||||||||||||||| ||    |||||||||||||||  |    
T  20284320 ccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctccttt-ataatccaagtttctctctctcaa 20284418  T
Q  108 agctctctttcaaaatctgcaaag-aacacttatata 143  Q
    | ||||| |||||||| ||||||| ||||||||||||    
T  20284419 aactctccttcaaaatttgcaaagaaacacttatata 20284455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 23565251 - 23565363
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttct 98  Q
    |||||||||| ||||||||||||| ||||| | || |||||||||| ||||||||||||||| |||| ||||||||||||||||||| || |||||||||    
T  23565251 ttcactcacccaaggtgtttacaaatgttttctaaaccaagagaac-ctaatcaaagacccttaacc-taaagttacctcctttgatatcccaagtttct 23565348  T
Q  99 ctctcttcaagctct 113  Q
    ||||||| |||||||    
T  23565349 ctctcttgaagctct 23565363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 9189873 - 9189736
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaag-accctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 106  Q
    ||||||||||||||||||||||||||||||||||||  || | ||||| || |||||||||||||||| ||||||||   || |||||||||||||||      
T  9189873 ccaaggtgtttacaatgtttcccaacccaagagaaccttactacaaagaacactcaaccctaaagttatctcctttgcaatc-caagtttctctctctaa 9189775  T
Q  107 aagctctctttc-aaaatctgcaaag-aacacttatata 143  Q
    || |||||| || ||||||||||||| ||||||||||||    
T  9189774 aacctctctctcaaaaatctgcaaagaaacacttatata 9189736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 23343930 - 23343840
Alignment:
Q  22 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctc 112  Q
    ||||||||| |||| |||||||| |||||||||||| ||| ||||||||||||| |||||||||||| |||| |||||| |||| ||||||    
T  23343930 aatgtttccaaacctaagagaaccctaatcaaagactctcgaccctaaagttacatcctttgatttcccaagattctctttcttgaagctc 23343840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 36146659 - 36146725
Alignment:
Q  47 taatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| |||||||    
T  36146659 taatcaaagaccctcaacactaaagttacctcctttgatttcccaagtttttctctcttgaagctct 36146725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 106
Target Start/End: Original strand, 43504347 - 43504444
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 106  Q
    |||||||||| | ||||||||||| ||||||||| |||||||||||||| || ||||||| |||| |  ||||||||||| |||||||||||||||||    
T  43504347 caaggtgtttcccatgtttcccaagccaagagaagctctaatcaaagactctaaaccctagagtttctccctttgatttcccaagtttctctctcttc 43504444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 221
Target Start/End: Original strand, 79662 - 79833
Alignment:
Q  51 caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgca-aagaacacttatataacagtc 149  Q
    ||||||| ||||| | |||||||||||||||||   || ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||  ||||    
T  79662 caaagacactcaatcttaaagttacctcctttgtaatc-caagtttctctctcttcaagctctccttcaaaatctgcacaagaacacatatatagtagtc 79760  T
Q  150 ttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    |||| | |||  ||||||||||| ||||  ||| |||||| |  ||||| ||| || || |||| ||||||||    
T  79761 ttcaactgtcagaatcgtgtcacattttgtccaaatcgtgacgtgattggtgcatatgacccaatgtacgacc 79833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 21983581 - 21983686
Alignment:
Q  116 ttcaaaatctgca-aagaacacttatataacagtcttcagcg-tcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaag 213  Q
    ||||||||||||| ||||||||||||||| | |||||||||| || |||||||||||||||||  ||| |||||| ||| |||| ||||||||| |||||    
T  21983581 ttcaaaatctgcacaagaacacttatatagctgtcttcagcggtcaaaatcgtgtcacgtttt--ccaaatcgtgacacaattggtgcgtacgacccaag 21983678  T
Q  214 gtacgacc 221  Q
    ||||||||    
T  21983679 gtacgacc 21983686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 23402879 - 23402784
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctct 104  Q
    ||||||||||||||||||||||||||||||||||| |||    ||||||| |||||||||||||||||||||||||   || |||||||||||||||    
T  23402879 ccaaggtgtttacaatgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctct 23402784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 126
Target Start/End: Original strand, 3047500 - 3047603
Alignment:
Q  24 tgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaa 122  Q
    |||||||||||||||||||||   | | ||||||| |||||||||||||||||||||||||   || |||||||||||||||| |||||||  |||||||    
T  3047500 tgtttcccaacccaagagaacctcactacaaagacactcaaccctaaagttacctcctttgtaatcccaagtttctctctcttaaagctcttcttcaaaa 3047599  T
Q  123 tctg 126  Q
    ||||    
T  3047600 tctg 3047603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 4796534 - 4796322
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||| ||||||||||||| |   | | ||||||| ||||||| |||||||||||||||||   || |||||||||||| || ||    
T  4796534 ccaaggtgtttacaatgttttccaacccaagagatcctcactacaaagacactcaacc-taaagttacctcctttgtaatc-caagtttctctcactcca 4796437  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||  |||||||||| || | ||||||||||||| || |||||| |  || |||||||||||||||| | | | || |||  ||  ||| |||||||    
T  4796436 agctcttcttcaaaatctacacaggaacacttatatagcaatcttcaactatcaaaatcgtgtcacgtttgt-ctaaattgtgatacatttggtgcgtac 4796338  T
Q  206 gatccaaggtacgacc 221  Q
    ||||||||||||||||    
T  4796337 gatccaaggtacgacc 4796322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 9185040 - 9184965
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttg 83  Q
    ||||||||||||||||||||||||||||||||||||  || | ||||||  |||||||||||||||||||||||||    
T  9185040 ccaaggtgtttacaatgtttcccaacccaagagaaccttactacaaagatactcaaccctaaagttacctcctttg 9184965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 2759071 - 2759124
Alignment:
Q  102 tcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc 155  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  2759071 tcttcaagctctccttcaaaatctgcaaagaacacttatatagcagtcttcagc 2759124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 8153271 - 8153194
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctct 113  Q
    |||||| || |||||||||||||| ||||| |||||||||||||||||||||  | |||||||||||||| |||||||    
T  8153271 caagaggaccctaatcaaagacccccaaccttaaagttacctcctttgattttcctagtttctctctcttgaagctct 8153194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 5817143 - 5817040
Alignment:
Q  2 tcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||| ||||||| ||||||||||||||||||| || |||||   | | ||||||| ||||||| |||||||||||||||||  ||| |||||||||||    
T  5817143 tcactccccaaggtatttacaatgtttcccaaccaaatagaacctcactacaaagacactcaaccataaagttacctcctttgtattcccaagtttctct 5817044  T
Q  101 ctct 104  Q
    ||||    
T  5817043 ctct 5817040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 103
Target Start/End: Original strand, 30843472 - 30843539
Alignment:
Q  36 caagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||| || ||||||||| || || ||||||||||||||||||||||||| |||||||||||||    
T  30843472 caagagaacccttatcaaagactctaaatcctaaagttacctcctttgatttcttaagtttctctctc 30843539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 29160036 - 29160133
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaatc-aaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||||||||||||||||||||||  ||||||||   | |  |||||| |||||||| ||||||||||||||||  ||| ||||||||||||||    
T  29160036 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactataaagacactcaacccaaaagttacctcctttgtattcccaagtttctctctc 29160133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 9235448 - 9235414
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaa 43  Q
    |||||||||||||||||||||||||||||||||||    
T  9235448 ccaaggtgtttacaatgtttcccaacccaagagaa 9235414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27347795 - 27347745
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaat 50  Q
    |||||||||| || |||||||||||||||||||||| ||||||||||||||    
T  27347795 ttcactcacccaatgtgtttacaatgtttcccaacctaagagaactctaat 27347745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 47263995 - 47264086
Alignment:
Q  129 aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||||||||||||| ||||||||||| |   |||||||| ||||||||  ||| ||||||||| ||||||| ||||||| ||||| |||||||    
T  47263995 aagaacacttatatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcgtgtcaagattgatacgtacgacccaagatacgacc 47264086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 3050494 - 3050554
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||||||||||| |||||| | ||  ||||||||||||||||||||| |||||||||||||    
T  3050494 aaatcgtgtcacgattttccaa-atgatgtcacgattgatgcgtacgacccaaggtacgacc 3050554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8153320 - 8153276
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaac 44  Q
    |||||||||| || |||||||||||||||||||||||||||||||    
T  8153320 ttcactcacccaatgtgtttacaatgtttcccaacccaagagaac 8153276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12098049 - 12098093
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaac 44  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||    
T  12098049 ttcactcacccaagatgtttacaatgtttcccaacccaagagaac 12098093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 21640041 - 21640138
Alignment:
Q  9 ccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctct 104  Q
    |||||||||||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||   || |||||||||||||||    
T  21640041 ccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagttccctcctttgtaatc-caagtttctctctct 21640138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 21646239 - 21646336
Alignment:
Q  9 ccaaggtgtttacaatg--tttcccaacccaagaga-actctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctct 104  Q
    |||||||||||||||||  |||||||||||||||||  ||||   ||||||| |||||||||| |||| |||||||||   ||| ||||||||||||||    
T  21646239 ccaaggtgtttacaatgtttttcccaacccaagagatcctctctacaaagacactcaaccctagagtttcctcctttgtaatct-aagtttctctctct 21646336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 26639200 - 26639149
Alignment:
Q  59 ctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 110  Q
    |||||||||||||||| |||||||||||||  ||||||| ||||||| ||||    
T  26639200 ctcaaccctaaagttatctcctttgatttcctaagtttcactctcttgaagc 26639149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 86
Target Start/End: Complemental strand, 40808517 - 40808482
Alignment:
Q  51 caaagaccctcaaccctaaagttacctcctttgatt 86  Q
    ||||||| ||||||||||||||||||||||||||||    
T  40808517 caaagacactcaaccctaaagttacctcctttgatt 40808482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 105
Target Start/End: Original strand, 3904879 - 3904924
Alignment:
Q  59 ctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 105  Q
    |||||||||||| | |||||||||||||||| |||||||||||||||    
T  3904879 ctcaaccctaaaatcacctcctttgatttct-aagtttctctctctt 3904924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 4796288 - 4796250
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  4796288 aaatcgtgtcacgtttttccaaaatcgtgtcacgattga 4796250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 196
Target Start/End: Original strand, 6592531 - 6592717
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| || | || ||||||||||| ||||| ||||||| | ||    
T  6592531 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagcttcc-cctttgatttcccaagtctctctct-tcca 6592627  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgatt 196  Q
    | |||||| |  ||||||||| |||||||||||  ||  |||||||  | ||   |||||||||||| |||||||| ||||||||||||||    
T  6592628 acctctctcttcaaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttccca-atcgtgtcacgatt 6592717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 106
Target Start/End: Complemental strand, 20343873 - 20343776
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 106  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||| | ||||| |||||||||||    
T  20343873 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgattccccaagtctctctctcttc 20343776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 24789817 - 24789724
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctct 102  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| |  ||||||||||| ||||| |||||||    
T  24789817 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagtctctctct 24789724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 36146598 - 36146643
Alignment:
Q  1 ttcactcacc-aaggtgtttacaa-tgtttcccaacccaagagaac 44  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  36146598 ttcactcacccaaggtgtttacaaatgtttcccaacccaagagaac 36146643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 21646497 - 21646533
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgatt 196  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  21646497 aaatcgtgtcacgattttccaagatcgtgtcacgatt 21646533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 39
Target Start/End: Original strand, 35961050 - 35961078
Alignment:
Q  11 aaggtgtttacaatgtttcccaacccaag 39  Q
    |||||||||||||||||||||||||||||    
T  35961050 aaggtgtttacaatgtttcccaacccaag 35961078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 434510 - 434290
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||||||||||    
T  434510 ttcactcaccaaggtatttaccatgttttccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagtttctct 434411  T
Q  101 ctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatg 200  Q
    |||||||||||| | ||||||||||||||||||||||| |||| | |||||| ||||| |||||||| ||||||||||||  |||||| ||||||| |||    
T  434410 ctcttcaagctcaccttcaaaatctgcaaagaacacttttatagcggtcttctgcgtcaaaatcgtgccacgtttttccccaatcgtgccacgatttatg 434311  T
Q  201 cgtacgatccaaggtacgacc 221  Q
    |||||||||||||||||||||    
T  434310 cgtacgatccaaggtacgacc 434290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 20605 - 20826
Alignment:
Q  1 ttcactcacc-aaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctc 99  Q
    |||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  20605 ttcactcacccaaggtgtttacaatgtctcccaacccaagataactctaatcaaagaccctcaaccctaaagttacctcctttgatttccaaagtttctc 20704  T
Q  100 tctcttcaagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattga 198  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||  || ||||||||| ||| |||| ||| |||||| |||| ||      
T  20705 tctcttctagctctccttcaaaatctgcaaagaacacttatataacagttttcagctatcaaaatcgtgttacg-ttttgccaaatcgtgacacgtttag 20803  T
Q  199 tgcgtacgatccaaggtacgacc 221  Q
    ||||||||| |||||||||||||    
T  20804 tgcgtacgacccaaggtacgacc 20826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 114580 - 114347
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactc-------------taatcaaagaccctcaaccctaaagttacctcctttgattt 87  Q
    |||||||||||||||||||||||||||||||||||||||||||| |             |||||||||||||||||||||||||||||||||||||||||    
T  114580 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaacccctcaagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgattt 114481  T
Q  88 ctcaagtttctctctcttcaagctctctttcaaaatctgcaaag----aacacttatataacagtcttcagcgtcgaaatcgtgtcacgtttttcccaga 183  Q
    ||||||||||||||||||||||||| | ||||||||||||||||    |||||||||||| ||| ||||||| |||||||||||||||||||| |    |    
T  114480 ctcaagtttctctctcttcaagctcacattcaaaatctgcaaagatctaacacttatatagcagccttcagcatcgaaatcgtgtcacgttttccatcaa 114381  T
Q  184 tcgtgtcacgattgatgcgtacgatccaaggtac 217  Q
    ||||||||||| |||||||||||| |||||||||    
T  114380 tcgtgtcacgagtgatgcgtacgacccaaggtac 114347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 11354 - 11572
Alignment:
Q  3 cactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||| ||||||  ||||||||||| ||||||||||||    
T  11354 cactcaccaaggtgtttacaatgtttcccaacccaagagaagctctaatcaaagaccataaaccctagagttactccctttgatttcccaagtttctctc 11453  T
Q  102 tcttcaagctctctttcaaaatctgca-aagaacacttatataacagtctt-cagcgtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgat 199  Q
    ||||| | ||||| ||||||||||||| ||||||||||| |||  || ||| ||  |   ||||||||||||| |||  ||||||||||||||||||| |    
T  11454 tcttccaactctc-ttcaaaatctgcacaagaacacttaaatactagccttccactgataaaatcgtgtcacgattt--ccagatcgtgtcacgattggt 11550  T
Q  200 gcgtacgatccaaggtacgacc 221  Q
    |||||||  |||||||||||||    
T  11551 gcgtacgtcccaaggtacgacc 11572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 8928 - 9065
Alignment:
Q  3 cactcaccaaggtgtttacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctc 101  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| || |||| ||||||  ||||||||||| ||||||||||||    
T  8928 cactcaccaaggtctttacaatgtttcccaacccaagagaagctctaatcaaagaccctaaagcctagagttactccctttgatttcccaagtttctctc 9027  T
Q  102 tcttcaagctctctttcaaaatctgca-aagaacactta 139  Q
    ||||| | ||||| ||||||||||||| |||||||||||    
T  9028 tcttccaactctc-ttcaaaatctgcacaagaacactta 9065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 894 - 783
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctct 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |  ||||||||||| |||||||||||    
T  894 ttcactcaccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgctgcctttgatttcccaagtttctct 795  T
Q  101 ctcttcaagctc 112  Q
    |||||| |||||    
T  794 ctcttctagctc 783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 88; Significance: 2e-42; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 5916 - 6129
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||| ||||||||||||| |   | | ||||||| ||||||| |||||||||||||||||   || ||| ||||||||||||||    
T  5916 ccaaggtgtttacaatgtttgccaacccaagagatcctcactacaaagacactcaaccataaagttacctcctttgtaatc-caattttctctctcttca 6014  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| ||||||| ||||||| ||||||||||| ||| |||||||||||||||| | ||| || ||| |||||||| |||||||    
T  6015 agctctccttcaaaatctgcacaagaacatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgt-ccaaattgtgacacgattggtgcgtac 6113  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  6114 gacccaaggtacgacc 6129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 133145 - 132933
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||  ||||||||||||||| |||||||||   || |||||||||||||||| |    
T  133145 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagaaactcaaccctaaagttccctcctttgtaatc-caagtttctctctcttta 133047  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| | |||||| |||| ||||||||||||||| ||||||||||| |   |||||||| ||||||||  ||| ||||||||||||||||| |||||    
T  133046 agctctcctccaaaatttgcacaagaacacttatatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcgtgtcacgattgatacgtac 132949  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  132948 gacccaaggtacgacc 132933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 221
Target Start/End: Original strand, 2726 - 2937
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||||||||||||||||| |   | | ||||||  || ||||||||||||||||  ||||  |  || | |||||||||||||||    
T  2726 caaggtgtttacaatgtttcccaacccaagagatcctcactacaaagaaacttaaccctaaagttaccttttttg--taatccaatttctctctcttcaa 2823  T
Q  109 gctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacg 206  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||||||| ||  |||||||||||||||| | ||| |||||| |||||||| ||||||||    
T  2824 gctctccttcaaaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgt-ccaaatcgtgacacgattggtgcgtacg 2922  T
Q  207 atccaaggtacgacc 221  Q
    | |||||||||||||    
T  2923 acccaaggtacgacc 2937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 149296 - 149403
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaa 108  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||    |||||| ||    
T  149296 ccaaggtgtttacaatgtttctcaacctaagagaactctaatcaaagaccctcaacccacaagttacctcctttgatttcccaagttgtcatctcttgaa 149395  T
Q  109 gctctctt 116  Q
    ||||||||    
T  149396 gctctctt 149403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 36698 - 36486
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||| ||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   || ||||||||||||||||||    
T  36698 ccaaggtgtttacaatgttttccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttca 36600  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| ||||||||||||| |||||||||| |||| ||||||||||| |   |||||||| ||||||||  ||| |||||| || ||||| |||||||    
T  36599 agctctccttcaaaatctgcacaagaacacttttatagcagtcttcagctgataaaatcgtgccacgtttt--ccaaatcgtgccatgattggtgcgtac 36502  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  36501 gacccaaggtacgacc 36486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 43827 - 43615
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||| ||| |   | | ||||||| |||||||||||||||||||||||||   || |||||||||||||||||     
T  43827 ccaaggtgtttacaatgtttcccaacccaaaagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctctcttcc 43729  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| | ||||||||||| || |||||||||||| |||| |||||| |   |||||||| ||||||||  ||| |||||| |||||||||| | |||    
T  43728 agctctcctccaaaatctgcacaaaaacacttatatagcagtattcagctgataaaatcgtgccacgtttt--ccaaatcgtgccacgattgatacatac 43631  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  43630 gacccaaggtacgacc 43615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 85914 - 86083
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||| ||||||||||||||||||||||||||||| |   | | ||||||| |||||||||||||||||||||||||   || |||||||||||| |||||    
T  85914 ccaaagtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttacctcctttgtaatc-caagtttctctcacttca 86012  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcag-cgtcgaaatcgtgtcacgtttt 176  Q
    |||| || ||||||||||||| ||||||||||||||| ||||||||||  ||| |||||||||||||||||    
T  86013 agctatccttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcacgtttt 86083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 45429 - 45642
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaatc--aaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttc 106  Q
    ||||||||||||||||||||| |||||||||||| |   | |   ||||||  ||||||||||||||||||||||||   || |||||||||||||||||    
T  45429 ccaaggtgtttacaatgtttcacaacccaagagatcctcactacaaaagacattcaaccctaaagttacctcctttgtaatc-caagtttctctctcttc 45527  T
Q  107 aagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgta 204  Q
    ||||||| || |||||| |||| ||||||||||| ||| || |||||||| |   |||||||| ||||||||  ||| |||||||||||||||||  |||    
T  45528 aagctcttttccaaaatttgcacaagaacacttaaataccaatcttcagctgataaaatcgtgccacgtttt--ccaaatcgtgtcacgattgatatgta 45625  T
Q  205 cgatccaaggtacgacc 221  Q
    ||| |||||||||||||    
T  45626 cgacccaaggtacgacc 45642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 8283 - 8071
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttca 107  Q
    |||||||||||||||||||||||||||||||||| |   | | ||||||| ||||||||||||||| |||||||||   || |||||||||||||||||     
T  8283 ccaaggtgtttacaatgtttcccaacccaagagatcctcactacaaagacactcaaccctaaagttccctcctttgtaatc-caagtttctctctcttcc 8185  T
Q  108 agctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtac 205  Q
    ||||||| | | ||| ||||| | ||||||||| ||| ||||||||||| |   ||||| || |||| ||||  || ||||||||||||||||| |||||    
T  8184 agctctcctccgaaaactgcacacgaacacttaaataccagtcttcagctgataaaatcatgccacgatttt--caaatcgtgtcacgattgatacgtac 8087  T
Q  206 gatccaaggtacgacc 221  Q
    || |||||||||||||    
T  8086 gacccaaggtacgacc 8071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 175
Target Start/End: Original strand, 17482 - 17650
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc-ttc 106  Q
    ||||||||||||||||||||||||| |||||||| ||| | | ||||||| ||||||| |||||||||||||| ||   || |||| ||||||||| |||    
T  17482 ccaaggtgtttacaatgtttcccaatccaagagatctccactacaaagacactcaaccgtaaagttacctcctatgtaatc-caaggttctctctctttc 17580  T
Q  107 aagctctctttcaaaatctgcaaagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgttt 175  Q
    ||||| |  |||||||||| ||||||||||||||||| |||| |||||| ||| |||||||| |||||||    
T  17581 aagctatacttcaaaatctacaaagaacacttatatagcagttttcagctgtcaaaatcgtgacacgttt 17650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 139
Target Start/End: Complemental strand, 22280 - 22183
Alignment:
Q  42 aactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaatctgca-aagaacactta 139  Q
    ||||||||||||||||||| ||||||| |||| |  ||||||||||| ||||||||||||||||| ||||| | ||| ||||||||| |||||||||||    
T  22280 aactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagtttctctctcttctagctcaccttc-aaatctgcacaagaacactta 22183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 11535 - 11502
Alignment:
Q  1 ttcactcaccaaggtgtttacaatgtttcccaac 34  Q
    ||||||||||||||||||||||||||||||||||    
T  11535 ttcactcaccaaggtgtttacaatgtttcccaac 11502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 10962 - 11059
Alignment:
Q  9 ccaaggtgtttacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctc 103  Q
    ||||||||||||||||||||||||||||  ||||||||   | | ||||||| ||||||| |||||||||||||||||  |||  |||||||||||||    
T  10962 ccaaggtgtttacaatgtttcccaaccctcaagagaacctcactacaaagacactcaaccataaagttacctcctttgtattccaaagtttctctctc 11059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 196
Target Start/End: Complemental strand, 6250 - 6064
Alignment:
Q  10 caaggtgtttacaatgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt-c 106  Q
    |||||||||| | |||||| | ||||||||||| |||||||||||||| |||| ||||||| |||| || ||||||||||| ||||| |||||||||| |    
T  6250 caaggtgtttcccatgttttc-aacccaagagatactctaatcaaagaaccctaaaccctagagttgcc-cctttgatttcccaagtctctctctcttcc 6153  T
Q  107 aagctctctttcaaaatctgca-aagaacacttatataacagtcttcagc-gtcgaaatcgtgtcacgtttttcccagatcgtgtcacgatt 196  Q
    || |||||||   ||||||||| |||||||||||  ||  |||||||  | ||   |||||||||||| |||||||| ||||||||||||||    
T  6152 aacctctctt--caaatctgcacaagaacacttaagtactagtcttcctctgttccaatcgtgtcacgattttccca-atcgtgtcacgatt 6064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19129 - 19199
Alignment:
Q  1 ttcactcaccaaggtgtttacaa-tgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaa 70  Q
    |||||||||| | |||||||||| ||||||||||||||||||||| || | ||||||| |||| |||||||    
T  19129 ttcactcacccaagtgtttacaaatgtttcccaacccaagagaaccctcaccaaagactctcagccctaaa 19199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 23807 - 23877
Alignment:
Q  52 aaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagctctctttcaaaa 122  Q
    |||||| ||||||| ||||||||||||| |||   ||||||||||||||||||| ||| |||  |||||||    
T  23807 aaagacgctcaaccttaaagttacctccattgtaatctcaagtttctctctcttaaagatcttcttcaaaa 23877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 80852 - 80912
Alignment:
Q  160 aaatcgtgtcacgtttttcccagatcgtgtcacgattgatgcgtacgatccaaggtacgacc 221  Q
    ||||||||||||| ||| |||| |||||| |||| ||| ||||||||| |||||||||||||    
T  80852 aaatcgtgtcacgattt-cccaaatcgtgacacgtttggtgcgtacgacccaaggtacgacc 80912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 3577 - 3541
Alignment:
Q  159 gaaatcgtgtcacgtttttcccagatcgtgtcacgat 195  Q
    |||||||||||||| |||||| |||||||||||||||    
T  3577 gaaatcgtgtcacgattttcctagatcgtgtcacgat 3541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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