View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3664_high_6 (Length: 269)
Name: NF3664_high_6
Description: NF3664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3664_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 49885883 - 49886141
Alignment:
| Q |
1 |
ctataccaattcatcatacattaagcacatcaattttacatttattagtattagttatgaatctcccaataattacaagttgaatttaagttaaacatcg |
100 |
Q |
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| T |
49885883 |
ctataccaattcatcatacattaagcacatcaattttacatttattagtattagttatgaatctcccaataattacaagttgaatttaagttaaacatcg |
49885982 |
T |
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| Q |
101 |
catcgctcctggattttttcttgaagctgtgctttcctaagtttcctttttcatcaaacgaaatagtgccaattaggctatgatggcaaatgaaacaaga |
200 |
Q |
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| T |
49885983 |
catcgctcctggattttttcttgaagctgtgctttcctaagtttcctttttcatcaaacgaaatagtgccaattaggctatgatggcaaatgaaacaaga |
49886082 |
T |
|
| Q |
201 |
aaataattaaagataactaaaatgtcaaaactcattaaaagcacaattgatatcctatg |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
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| T |
49886083 |
aaataattaaagataactaaaatgtcaaaactcattaaaagcataattgatagcctatg |
49886141 |
T |
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