View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3664_low_5 (Length: 286)

Name: NF3664_low_5
Description: NF3664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3664_low_5
NF3664_low_5
[»] chr3 (61 HSPs)
chr3 (6-240)||(46818089-46818322)
chr3 (6-52)||(18013357-18013403)
chr3 (6-52)||(36179023-36179069)
chr3 (6-52)||(43394446-43394492)
chr3 (6-49)||(900978-901021)
chr3 (6-49)||(9484722-9484765)
chr3 (6-49)||(16434747-16434790)
chr3 (6-49)||(29720521-29720564)
chr3 (6-49)||(29793268-29793311)
chr3 (6-49)||(34263594-34263637)
chr3 (6-49)||(34555277-34555320)
chr3 (6-49)||(38878368-38878411)
chr3 (6-49)||(47070148-47070191)
chr3 (6-49)||(49076316-49076359)
chr3 (6-52)||(1778487-1778533)
chr3 (6-48)||(2643160-2643202)
chr3 (6-52)||(4229075-4229121)
chr3 (6-52)||(4945738-4945784)
chr3 (6-52)||(9281350-9281396)
chr3 (6-52)||(9997767-9997813)
chr3 (6-52)||(10106271-10106317)
chr3 (6-52)||(10228616-10228662)
chr3 (6-52)||(10232372-10232418)
chr3 (6-48)||(29455599-29455641)
chr3 (6-52)||(36364650-36364696)
chr3 (6-48)||(46866469-46866511)
chr3 (6-47)||(20144814-20144855)
chr3 (6-50)||(33462831-33462875)
chr3 (8-52)||(44774313-44774357)
chr3 (8-52)||(44821421-44821465)
chr3 (8-48)||(53055516-53055556)
chr3 (6-49)||(12250429-12250472)
chr3 (6-49)||(12948166-12948209)
chr3 (6-49)||(34669734-34669777)
chr3 (10-49)||(42098517-42098556)
chr3 (6-49)||(48927692-48927735)
chr3 (6-52)||(4465007-4465053)
chr3 (6-52)||(26759605-26759650)
chr3 (6-52)||(32961372-32961418)
chr3 (6-48)||(34680307-34680349)
chr3 (6-48)||(36594310-36594352)
chr3 (6-52)||(40415048-40415094)
chr3 (6-52)||(43370417-43370463)
chr3 (6-52)||(47339971-47340017)
chr3 (6-52)||(49818883-49818929)
chr3 (6-47)||(53019954-53019995)
chr3 (8-49)||(53274885-53274926)
chr3 (8-52)||(4016593-4016637)
chr3 (6-53)||(37166605-37166652)
chr3 (6-49)||(50673803-50673846)
chr3 (14-52)||(1334185-1334223)
chr3 (6-52)||(3817849-3817895)
chr3 (6-48)||(18971445-18971487)
chr3 (6-48)||(21490196-21490238)
chr3 (10-52)||(28958886-28958928)
chr3 (6-48)||(39557474-39557516)
chr3 (6-48)||(52093985-52094027)
chr3 (15-48)||(29444944-29444977)
chr3 (11-48)||(29809475-29809512)
chr3 (11-48)||(38833604-38833641)
chr3 (8-48)||(21271980-21272020)
[»] chr8 (44 HSPs)
chr8 (6-52)||(5777443-5777489)
chr8 (6-52)||(20671382-20671428)
chr8 (6-52)||(43049158-43049204)
chr8 (6-49)||(761676-761719)
chr8 (6-49)||(15870301-15870344)
chr8 (6-49)||(21132820-21132863)
chr8 (6-49)||(23437705-23437748)
chr8 (6-49)||(23547194-23547237)
chr8 (6-49)||(25009270-25009313)
chr8 (6-49)||(29708687-29708730)
chr8 (6-49)||(42150042-42150085)
chr8 (6-52)||(8123764-8123810)
chr8 (6-52)||(11756904-11756950)
chr8 (6-52)||(14511966-14512012)
chr8 (6-52)||(18419124-18419170)
chr8 (6-48)||(25691490-25691532)
chr8 (6-48)||(30464558-30464600)
chr8 (6-52)||(38036747-38036793)
chr8 (6-52)||(44362047-44362093)
chr8 (11-52)||(29917817-29917858)
chr8 (9-49)||(14378579-14378619)
chr8 (8-52)||(25866197-25866241)
chr8 (6-49)||(4327011-4327054)
chr8 (6-52)||(30653486-30653533)
chr8 (6-52)||(4960277-4960323)
chr8 (6-52)||(8496775-8496821)
chr8 (6-52)||(11538816-11538862)
chr8 (6-52)||(25118912-25118958)
chr8 (6-48)||(27301988-27302030)
chr8 (6-52)||(37094258-37094304)
chr8 (10-48)||(38842293-38842331)
chr8 (6-52)||(44020938-44020983)
chr8 (6-48)||(44717421-44717463)
chr8 (6-48)||(44887608-44887650)
chr8 (10-48)||(44947147-44947185)
chr8 (9-52)||(29616215-29616258)
chr8 (6-48)||(43184671-43184714)
chr8 (5-47)||(7044215-7044257)
chr8 (6-48)||(9632282-9632324)
chr8 (10-48)||(14583815-14583853)
chr8 (6-52)||(23849741-23849787)
chr8 (6-48)||(36632086-36632128)
chr8 (6-48)||(40204815-40204857)
chr8 (6-52)||(44871457-44871503)
[»] chr7 (42 HSPs)
chr7 (6-52)||(19817461-19817507)
chr7 (6-52)||(48448644-48448690)
chr7 (6-50)||(46242372-46242416)
chr7 (6-49)||(32345678-32345721)
chr7 (6-49)||(35265716-35265759)
chr7 (6-49)||(36820002-36820045)
chr7 (6-49)||(40232054-40232097)
chr7 (6-48)||(9173232-9173274)
chr7 (10-52)||(18756719-18756761)
chr7 (10-52)||(32972227-32972269)
chr7 (6-52)||(40818589-40818635)
chr7 (6-52)||(41844895-41844941)
chr7 (6-47)||(29247753-29247794)
chr7 (6-49)||(16807041-16807084)
chr7 (6-49)||(25273912-25273955)
chr7 (6-49)||(27621190-27621233)
chr7 (6-49)||(35693725-35693768)
chr7 (6-52)||(3124038-3124084)
chr7 (6-52)||(7312990-7313036)
chr7 (6-52)||(9136554-9136600)
chr7 (6-52)||(19327441-19327487)
chr7 (6-52)||(32222676-32222722)
chr7 (6-48)||(37100922-37100964)
chr7 (10-48)||(38441943-38441981)
chr7 (6-47)||(31496542-31496583)
chr7 (6-51)||(40665661-40665706)
chr7 (8-52)||(38850830-38850874)
chr7 (6-53)||(23734296-23734343)
chr7 (6-49)||(38069177-38069220)
chr7 (10-48)||(4033384-4033422)
chr7 (6-52)||(4620191-4620236)
chr7 (6-52)||(26203188-26203234)
chr7 (6-52)||(27248737-27248783)
chr7 (6-48)||(30462117-30462159)
chr7 (6-48)||(38353494-38353536)
chr7 (10-52)||(39173962-39174004)
chr7 (7-48)||(27045501-27045542)
chr7 (6-51)||(28016241-28016286)
chr7 (7-48)||(41007853-41007894)
chr7 (11-48)||(47713328-47713365)
chr7 (8-52)||(36404818-36404862)
chr7 (8-52)||(47080745-47080789)
[»] chr6 (26 HSPs)
chr6 (6-52)||(10109307-10109353)
chr6 (6-52)||(30699387-30699433)
chr6 (6-52)||(32673874-32673920)
chr6 (6-52)||(35117402-35117448)
chr6 (6-49)||(2141694-2141737)
chr6 (6-49)||(2397896-2397939)
chr6 (6-49)||(2656569-2656612)
chr6 (6-49)||(6188555-6188598)
chr6 (6-49)||(17496227-17496270)
chr6 (6-49)||(24825291-24825334)
chr6 (6-49)||(28483163-28483206)
chr6 (6-49)||(29795576-29795619)
chr6 (6-48)||(2667225-2667267)
chr6 (6-48)||(9022966-9023008)
chr6 (6-52)||(26210873-26210919)
chr6 (6-51)||(10105937-10105982)
chr6 (6-47)||(29514927-29514968)
chr6 (6-49)||(995689-995732)
chr6 (6-49)||(2913023-2913066)
chr6 (10-49)||(24798445-24798484)
chr6 (6-49)||(32541376-32541419)
chr6 (6-48)||(12677105-12677147)
chr6 (6-52)||(31948538-31948584)
chr6 (6-49)||(6142406-6142449)
chr6 (16-52)||(16691717-16691753)
chr6 (6-49)||(16969504-16969548)
[»] chr5 (56 HSPs)
chr5 (6-52)||(14639607-14639653)
chr5 (6-52)||(40080107-40080153)
chr5 (6-49)||(9936783-9936826)
chr5 (6-49)||(14057834-14057877)
chr5 (6-49)||(14633133-14633176)
chr5 (6-49)||(19344594-19344637)
chr5 (6-49)||(30351966-30352009)
chr5 (6-49)||(30721580-30721623)
chr5 (6-49)||(31191072-31191115)
chr5 (6-49)||(41263024-41263067)
chr5 (6-52)||(967320-967366)
chr5 (6-48)||(1098301-1098343)
chr5 (6-52)||(1831190-1831236)
chr5 (6-52)||(1918722-1918768)
chr5 (6-52)||(4152202-4152248)
chr5 (6-48)||(13548339-13548381)
chr5 (6-52)||(14140044-14140090)
chr5 (6-48)||(14355625-14355667)
chr5 (6-52)||(26801993-26802039)
chr5 (6-52)||(26809543-26809589)
chr5 (6-52)||(32110534-32110580)
chr5 (6-48)||(32473918-32473960)
chr5 (6-52)||(34169955-34170001)
chr5 (6-52)||(39104171-39104217)
chr5 (6-52)||(40316657-40316703)
chr5 (6-52)||(41042729-41042775)
chr5 (6-46)||(28143054-28143094)
chr5 (6-49)||(1781040-1781083)
chr5 (6-49)||(14607452-14607495)
chr5 (6-49)||(20022986-20023029)
chr5 (6-49)||(30211636-30211679)
chr5 (6-52)||(2799758-2799804)
chr5 (6-52)||(2805924-2805970)
chr5 (6-52)||(10465187-10465233)
chr5 (6-48)||(20502944-20502986)
chr5 (6-52)||(26824570-26824616)
chr5 (6-52)||(27675666-27675712)
chr5 (6-48)||(30788331-30788373)
chr5 (6-48)||(33402487-33402529)
chr5 (6-52)||(34347597-34347643)
chr5 (6-52)||(40365780-40365826)
chr5 (6-52)||(40796964-40797010)
chr5 (6-52)||(41410838-41410884)
chr5 (16-52)||(36578722-36578758)
chr5 (8-55)||(4047367-4047414)
chr5 (6-49)||(20040310-20040353)
chr5 (6-48)||(1831477-1831519)
chr5 (6-48)||(6996107-6996149)
chr5 (6-52)||(21961316-21961362)
chr5 (6-52)||(27674343-27674389)
chr5 (6-48)||(40316944-40316986)
chr5 (6-48)||(41410555-41410597)
chr5 (6-47)||(12359915-12359956)
chr5 (11-52)||(21031765-21031806)
chr5 (8-52)||(8627263-8627307)
chr5 (8-48)||(39035688-39035728)
[»] chr4 (48 HSPs)
chr4 (6-52)||(17492793-17492839)
chr4 (6-52)||(29821176-29821222)
chr4 (6-48)||(30386957-30386999)
chr4 (6-49)||(3708379-3708422)
chr4 (6-49)||(10384974-10385017)
chr4 (6-49)||(28914494-28914537)
chr4 (6-49)||(39171084-39171127)
chr4 (6-49)||(43447291-43447334)
chr4 (6-49)||(46608339-46608382)
chr4 (6-49)||(48380882-48380925)
chr4 (6-49)||(55631769-55631812)
chr4 (6-52)||(1615665-1615711)
chr4 (6-52)||(6520561-6520607)
chr4 (6-52)||(8525307-8525353)
chr4 (6-52)||(24334269-24334315)
chr4 (6-52)||(24505637-24505683)
chr4 (6-48)||(31152787-31152829)
chr4 (6-48)||(37164142-37164184)
chr4 (6-48)||(39332725-39332767)
chr4 (6-52)||(39376759-39376805)
chr4 (6-48)||(43047513-43047555)
chr4 (6-52)||(48079939-48079985)
chr4 (6-52)||(51306125-51306171)
chr4 (7-48)||(48652599-48652640)
chr4 (1-48)||(10304878-10304925)
chr4 (6-49)||(37667668-37667711)
chr4 (6-49)||(40411502-40411545)
chr4 (6-52)||(1613109-1613155)
chr4 (6-52)||(2806062-2806108)
chr4 (10-48)||(4271909-4271947)
chr4 (6-52)||(23605793-23605839)
chr4 (6-52)||(28898962-28899008)
chr4 (6-52)||(28909731-28909777)
chr4 (6-52)||(28988285-28988331)
chr4 (6-52)||(44210275-44210321)
chr4 (6-48)||(47834039-47834081)
chr4 (10-52)||(52818581-52818623)
chr4 (6-52)||(54802949-54802995)
chr4 (6-47)||(11260828-11260869)
chr4 (7-52)||(42862184-42862229)
chr4 (8-52)||(39260480-39260524)
chr4 (6-53)||(6829364-6829410)
chr4 (9-52)||(29424775-29424818)
chr4 (6-52)||(37380961-37381008)
chr4 (9-52)||(50685049-50685092)
chr4 (6-52)||(31657248-31657293)
chr4 (6-48)||(39195616-39195658)
chr4 (6-47)||(18881253-18881294)
[»] chr2 (44 HSPs)
chr2 (6-52)||(38963921-38963967)
chr2 (6-52)||(45036489-45036535)
chr2 (8-52)||(26436578-26436622)
chr2 (6-49)||(1749066-1749109)
chr2 (6-49)||(5096374-5096417)
chr2 (6-49)||(8373560-8373603)
chr2 (5-52)||(9273478-9273525)
chr2 (6-49)||(12209115-12209158)
chr2 (6-49)||(37987830-37987873)
chr2 (6-49)||(41436958-41437001)
chr2 (6-52)||(6729994-6730040)
chr2 (6-52)||(7601288-7601334)
chr2 (6-48)||(7724506-7724548)
chr2 (6-48)||(8896397-8896439)
chr2 (6-48)||(11277660-11277702)
chr2 (6-48)||(15177495-15177537)
chr2 (6-48)||(16646372-16646414)
chr2 (6-52)||(22718434-22718480)
chr2 (6-48)||(25627149-25627191)
chr2 (6-52)||(37317002-37317048)
chr2 (6-48)||(41319819-41319861)
chr2 (6-47)||(31603312-31603353)
chr2 (6-50)||(18504598-18504642)
chr2 (8-52)||(20682770-20682814)
chr2 (8-48)||(42754250-42754290)
chr2 (6-49)||(4137535-4137578)
chr2 (6-49)||(10333472-10333515)
chr2 (5-52)||(34883216-34883263)
chr2 (6-52)||(25766570-25766616)
chr2 (6-48)||(40471862-40471904)
chr2 (6-52)||(41575688-41575734)
chr2 (10-48)||(43328696-43328734)
chr2 (6-51)||(6075251-6075296)
chr2 (6-47)||(16125978-16126019)
chr2 (6-47)||(16127676-16127717)
chr2 (6-47)||(16333606-16333647)
chr2 (6-49)||(20917821-20917864)
chr2 (10-52)||(8924630-8924672)
chr2 (10-52)||(11383936-11383978)
chr2 (6-48)||(22839020-22839062)
chr2 (6-48)||(24853375-24853417)
chr2 (6-52)||(25762320-25762366)
chr2 (6-52)||(44022394-44022440)
chr2 (6-50)||(15770975-15771019)
[»] chr1 (50 HSPs)
chr1 (6-52)||(4489187-4489233)
chr1 (6-52)||(5117330-5117376)
chr1 (6-52)||(23393358-23393404)
chr1 (6-52)||(44963568-44963614)
chr1 (6-52)||(52688657-52688703)
chr1 (6-49)||(5606290-5606333)
chr1 (6-49)||(5945891-5945934)
chr1 (6-49)||(6017348-6017391)
chr1 (6-49)||(7075229-7075272)
chr1 (6-49)||(10100412-10100455)
chr1 (6-49)||(10124235-10124278)
chr1 (6-49)||(36035812-36035855)
chr1 (6-49)||(44741469-44741512)
chr1 (6-49)||(52749407-52749450)
chr1 (6-52)||(8048644-8048690)
chr1 (10-52)||(8250739-8250781)
chr1 (6-52)||(28490286-28490332)
chr1 (6-48)||(31932078-31932120)
chr1 (10-52)||(33526058-33526100)
chr1 (6-52)||(40058863-40058909)
chr1 (6-48)||(40883537-40883579)
chr1 (6-52)||(41414329-41414375)
chr1 (6-52)||(41855617-41855663)
chr1 (6-52)||(50014457-50014503)
chr1 (6-51)||(3138718-3138763)
chr1 (7-52)||(43453061-43453106)
chr1 (8-48)||(2138929-2138969)
chr1 (10-52)||(9334511-9334553)
chr1 (10-52)||(9358284-9358326)
chr1 (6-48)||(31651801-31651843)
chr1 (6-52)||(44240645-44240691)
chr1 (6-48)||(45299444-45299486)
chr1 (6-48)||(48389192-48389234)
chr1 (6-52)||(49903582-49903627)
chr1 (6-47)||(26476910-26476951)
chr1 (6-50)||(22328053-22328097)
chr1 (9-49)||(26543997-26544037)
chr1 (8-52)||(38786842-38786886)
chr1 (6-52)||(8980800-8980846)
chr1 (6-48)||(10648098-10648140)
chr1 (6-48)||(27462864-27462906)
chr1 (6-52)||(37515426-37515472)
chr1 (6-48)||(47912407-47912449)
chr1 (6-52)||(48312154-48312200)
chr1 (6-47)||(1821529-1821570)
chr1 (6-52)||(26345300-26345348)
chr1 (8-48)||(13971658-13971698)
chr1 (8-48)||(22575680-22575720)
chr1 (13-49)||(29253572-29253608)
chr1 (8-52)||(45265280-45265324)
[»] scaffold0221 (1 HSPs)
scaffold0221 (6-49)||(5502-5545)
[»] scaffold1248 (1 HSPs)
scaffold1248 (6-52)||(1348-1394)
[»] scaffold0952 (1 HSPs)
scaffold0952 (6-52)||(919-965)
[»] scaffold0195 (1 HSPs)
scaffold0195 (6-52)||(137-183)
[»] scaffold0172 (1 HSPs)
scaffold0172 (6-52)||(19627-19673)
[»] scaffold0717 (1 HSPs)
scaffold0717 (6-52)||(4080-4126)
[»] scaffold0500 (1 HSPs)
scaffold0500 (6-48)||(571-613)
[»] scaffold0283 (1 HSPs)
scaffold0283 (10-48)||(3125-3163)
[»] scaffold0281 (1 HSPs)
scaffold0281 (10-48)||(13234-13272)
[»] scaffold0373 (1 HSPs)
scaffold0373 (6-53)||(7010-7056)
[»] scaffold0002 (1 HSPs)
scaffold0002 (6-48)||(392026-392068)


Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 6 - 240
Target Start/End: Complemental strand, 46818322 - 46818089
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaaggtcttagggcacaagttaaggaattcactttcatttggtgtgacgagacaca 105  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  46818322 tctcgattagtattttcaaaataccaaattttcataattttttctaaaatcttagggcacaagttaaggaattcactttcatttagtctgacgagacaca 46818223  T
Q  106 aacctttctaactctcaaagcaatgccattgatttgcacataaggagtagtagaacaaaggggccaaaggatgtccaatgctataccaaaaggagaactc 205  Q
    ||||||  ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46818222 aaccttattaactctcaaagcaatgccattgatgtgcacataa-gagtagtagaacaaaggggccaaaggatgtccaatgctataccaaaaggagaactc 46818124  T
Q  206 accagagcctccacgccaattgaaaccatttttgg 240  Q
    |||||||||||||||||||||||| ||||||||||    
T  46818123 accagagcctccacgccaattgaacccatttttgg 46818089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 18013403 - 18013357
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  18013403 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 18013357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 36179069 - 36179023
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  36179069 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 36179023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 43394492 - 43394446
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  43394492 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 43394446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 901021 - 900978
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  901021 tctcgatgagtattttcaaaatatcaaattttcataattttttc 900978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 9484722 - 9484765
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  9484722 tctcgatgagtattttcaaaatatcaaattttcataattttttc 9484765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 16434790 - 16434747
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  16434790 tctcgatgagtattttcaaaatatcaaattttcataattttttc 16434747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 29720521 - 29720564
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  29720521 tctcgatgagtattttcaaaatatcaaattttcataattttttc 29720564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 29793311 - 29793268
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  29793311 tctcgatgagtattttcaaaatatcaaattttcataattttttc 29793268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 34263637 - 34263594
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  34263637 tctcgatgagtattttcaaaatatcaaattttcataattttttc 34263594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 34555277 - 34555320
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  34555277 tctcgatgagtattttcaaaatatcaaattttcataattttttc 34555320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 38878411 - 38878368
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  38878411 tctcgatgagtattttcaaaatatcaaattttcataattttttc 38878368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 47070148 - 47070191
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  47070148 tctcgatgagtattttcaaaatatcaaattttcataattttttc 47070191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 49076359 - 49076316
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  49076359 tctcgatgagtattttcaaaatatcaaattttcataattttttc 49076316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 1778487 - 1778533
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  1778487 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 1778533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 2643202 - 2643160
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  2643202 tctcgatgagtattttcaaaatatcaaattttcataatttttt 2643160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 4229121 - 4229075
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  4229121 tctcgatgagtattttcaaaatatcaaatttttataattttttctaa 4229075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 4945784 - 4945738
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  4945784 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 4945738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 9281396 - 9281350
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  9281396 tctcgatgaatattttcaaaatatcaaattttcataattttttctaa 9281350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 9997813 - 9997767
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  9997813 tctcgatgagtattttcaaaatatcaaattttcataatttttcctaa 9997767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 10106317 - 10106271
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  10106317 tctcgatgagtattttcaaaatatcaaattttcataatttttcctaa 10106271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 10228662 - 10228616
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  10228662 tctcgatgaatattttcaaaatatcaaattttcataattttttctaa 10228616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 10232418 - 10232372
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  10232418 tctcgatgagtattttcaaaatatcaaattttcataatttttcctaa 10232372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 29455641 - 29455599
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  29455641 tctcgatgagtattttcaaaatatcaaattttcataatttttt 29455599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 36364696 - 36364650
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  36364696 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 36364650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 46866469 - 46866511
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  46866469 tctcgatgagtattttcaaaatatcaaattttcataatttttt 46866511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 20144855 - 20144814
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  20144855 tctcgatgagtattttcaaaatatcaaattttcataattttt 20144814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 33462831 - 33462875
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttct 50  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  33462831 tctcgatgaatattttcaaaatatcaaattttcataattttttct 33462875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 44774357 - 44774313
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  44774357 tcgatgaatattttcaaaatatcaaattttcataattttttctaa 44774313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 44821465 - 44821421
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||    
T  44821465 tcgatgaatattttcaaaatatcaaattttcataattttttctaa 44821421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 53055556 - 53055516
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  53055556 tcgatgagtattttcaaaatatcaaattttcataatttttt 53055516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 12250429 - 12250472
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  12250429 tctcgatgagtattttcaaaatatcaaatttttataattttttc 12250472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 12948166 - 12948209
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||    
T  12948166 tctcgataagtattttcaaaatatcaaattttcataattttttc 12948209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 34669734 - 34669777
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  34669734 tctcgatgagtatttttaaaatatcaaattttcataattttttc 34669777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 42098556 - 42098517
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  42098556 gatgagtattttcaaaatatcaaattttcataattttttc 42098517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 48927735 - 48927692
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  48927735 tctcaatgagtattttcaaaatatcaaattttcataattttttc 48927692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 4465007 - 4465053
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||||    
T  4465007 tctcgatgagtatttttaaaatatcaaattttcataactttttctaa 4465053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 26759605 - 26759650
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||||||| || |||||||||||||||||||||||    
T  26759605 tctcgatgagtattttcaaa-tatcaaattttcataattttttctaa 26759650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 32961372 - 32961418
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||    
T  32961372 tctcgatgagtatttttaaaatatgaaattttcataattttttctaa 32961418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 34680307 - 34680349
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| ||||||||||| |||||||    
T  34680307 tctcgatgagtattttcaaaatatcaaattttcatgatttttt 34680349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 36594352 - 36594310
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  36594352 tctcgatgaatattttcaaaatatcaaattttcataatttttt 36594310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 40415048 - 40415094
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| |||||| |||||| |||||||||||||||||||||||    
T  40415048 tctcgatgaatatttttaaaatatcaaattttcataattttttctaa 40415094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 43370417 - 43370463
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||    
T  43370417 tctcgatgagttttttcaaaatattaaattttcataattttttctaa 43370463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 47340017 - 47339971
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||||    
T  47340017 tctcgatgagtattttaaaaatattaaattttcataattttttctaa 47339971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 49818883 - 49818929
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||    
T  49818883 tctcgatgagtatttttaaaatatcaaattttcatgattttttctaa 49818929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 53019954 - 53019995
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  53019954 tctcgatgagtattttcaaaatatcaaatttttataattttt 53019995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 53274926 - 53274885
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||| ||||||||||||||| ||||||||||||||||||||    
T  53274926 tcgataagtattttcaaaatatcaaattttcataattttttc 53274885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 4016593 - 4016637
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| |||||| |||||| |||||||||||||||||||||||    
T  4016593 tcgatgaatatttttaaaatatcaaattttcataattttttctaa 4016637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 37166605 - 37166652
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaag 53  Q
    ||||||||| |||||| |||||| |||||||| |||||||||||||||    
T  37166605 tctcgatgaatatttttaaaatatcaaatttttataattttttctaag 37166652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 50673803 - 50673846
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||||||||||||||| |||||| |||||||||||||| |||||    
T  50673803 tctcgatgagtatttttaaaatatcaaattttcataatcttttc 50673846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 1334223 - 1334185
Alignment:
Q  14 agtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  1334223 agtattttcaaaatatcaaatttttataattttttctaa 1334185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 3817849 - 3817895
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||| ||||||  ||||||| ||||||||||||||    
T  3817849 tctcgatgagtattttaaaaatattaaatttttataattttttctaa 3817895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 18971487 - 18971445
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| |||||||||||||  ||||||||||||||||||    
T  18971487 tctcgatgaatattttcaaaatatgaaattttcataatttttt 18971445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 21490196 - 21490238
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||    
T  21490196 tctcgatgaatattttcaaaatatcaaatttttataatttttt 21490238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 28958928 - 28958886
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||| ||||||||||  |||||||||||    
T  28958928 gatgagtattttcaaaatatcaaattttcaagattttttctaa 28958886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 39557516 - 39557474
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||| | ||||||||||||| |||||||||||||||||||    
T  39557516 tctcgattaatattttcaaaatatcaaattttcataatttttt 39557474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 52094027 - 52093985
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||| ||||||||||||||| |||||||| ||||||||||    
T  52094027 tctcgataagtattttcaaaatatcaaatttttataatttttt 52093985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Complemental strand, 29444977 - 29444944
Alignment:
Q  15 gtattttcaaaataccaaattttcataatttttt 48  Q
    |||||||||||||| |||||||||||||||||||    
T  29444977 gtattttcaaaatatcaaattttcataatttttt 29444944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 29809475 - 29809512
Alignment:
Q  11 atgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  29809475 atgagtattttcaaaatatcaaattttcatgatttttt 29809512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 38833641 - 38833604
Alignment:
Q  11 atgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  38833641 atgactattttcaaaataacaaattttcataatttttt 38833604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 21271980 - 21272020
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||| ||||||||||||| |||||||| ||||||||||    
T  21271980 tcgatgaatattttcaaaatatcaaatttttataatttttt 21272020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 5777489 - 5777443
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  5777489 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 5777443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 20671382 - 20671428
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  20671382 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 20671428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 43049204 - 43049158
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  43049204 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 43049158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 761676 - 761719
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  761676 tctcgatgagtattttcaaaatatcaaattttcataattttttc 761719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 15870301 - 15870344
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  15870301 tctcgatgagtattttcaaaatatcaaattttcataattttttc 15870344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 21132863 - 21132820
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  21132863 tctcgatgagtattttcaaaatatcaaattttcataattttttc 21132820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 23437748 - 23437705
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  23437748 tctcgatgagtattttcaaaatatcaaattttcataattttttc 23437705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 23547194 - 23547237
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  23547194 tctcgatgagtattttcaaaatatcaaattttcataattttttc 23547237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 25009270 - 25009313
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  25009270 tctcgatgagtattttcaaaatatcaaattttcataattttttc 25009313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 29708687 - 29708730
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  29708687 tctcgatgagtattttcaaaatatcaaattttcataattttttc 29708730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 42150085 - 42150042
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  42150085 tctcgatgagtattttcaaaatatcaaattttcataattttttc 42150042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 8123764 - 8123810
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||    
T  8123764 tctcgatgagtattttcaaaatatcaaattttcatatttttttctaa 8123810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 11756904 - 11756950
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  11756904 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 11756950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 14511966 - 14512012
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  14511966 tctcgatgagtattttcaaaatatcaaatttttataattttttctaa 14512012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 18419124 - 18419170
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  18419124 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 18419170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 25691532 - 25691490
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  25691532 tctcgatgagtattttcaaaatatcaaattttcataatttttt 25691490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 30464558 - 30464600
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  30464558 tctcgatgagtattttcaaaatatcaaattttcataatttttt 30464600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 38036793 - 38036747
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  38036793 tctcgatgagtattttcaaaatatcaaattttcataatttttcctaa 38036747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 44362047 - 44362093
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  44362047 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 44362093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 29917858 - 29917817
Alignment:
Q  11 atgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  29917858 atgagtattttcaaaatatcaaattttcataattttttctaa 29917817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 14378619 - 14378579
Alignment:
Q  9 cgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  14378619 cgatgagtattttcaaaatatcaaattttcataattttttc 14378579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 25866197 - 25866241
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  25866197 tcgatgagtattttcaaaatatcaaattttcattattttttctaa 25866241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 4327054 - 4327011
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||||||||||||||||||| || ||||||||||||||||||||    
T  4327054 tctcgatgagtattttcaaagtatcaaattttcataattttttc 4327011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 30653486 - 30653533
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataa-ttttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  30653486 tctcgatgagtattttcaaaatatcaaattttcataagttttttctaa 30653533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 4960277 - 4960323
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||| |||||||||||||||||| ||||||||||| |||||||||||    
T  4960277 tctcaatgagtattttcaaaatatcaaattttcatgattttttctaa 4960323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 8496821 - 8496775
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| | ||||||||||||| |||||||||||||||||||||||    
T  8496821 tctcgataattattttcaaaatatcaaattttcataattttttctaa 8496775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 11538816 - 11538862
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  11538816 tctcgatgaatattttcaaaatatcaaattttcatgattttttctaa 11538862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 25118912 - 25118958
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  25118912 tctcgatgaatattttcaaaatatcaaatttttataattttttctaa 25118958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 27301988 - 27302030
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  27301988 tctcgatgagtattttcaaaatattaaattttcataatttttt 27302030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 37094258 - 37094304
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||||||    
T  37094258 tctcgatgagtattttcaaaatatcaaatttccatgattttttctaa 37094304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 38842293 - 38842331
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  38842293 gatgagtattttcaaaatatcaaattttcataatttttt 38842331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 44020983 - 44020938
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  44020983 tctcgatgagtattttcaaaatatcaaattttcat-attttttctaa 44020938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 44717421 - 44717463
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  44717421 tctcgatgaatattttcaaaatatcaaattttcataatttttt 44717463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 44887650 - 44887608
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  44887650 tctcgatgagtattttcaaaatatcaatttttcataatttttt 44887608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 44947147 - 44947185
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  44947147 gatgagtattttcaaaatatcaaattttcataatttttt 44947185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 29616258 - 29616215
Alignment:
Q  9 cgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||| || || |||||||||||||||||||||||    
T  29616258 cgatgagtattttctaactatcaaattttcataattttttctaa 29616215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 43184714 - 43184671
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaa-ttttcataatttttt 48  Q
    ||||||||||||||||||||||| |||| |||||||||||||||    
T  43184714 tctcgatgagtattttcaaaatatcaaatttttcataatttttt 43184671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 7044257 - 7044215
Alignment:
Q  5 ttctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    |||||||||| |||||||||||||  |||||||||||||||||    
T  7044257 ttctcgatgaatattttcaaaatattaaattttcataattttt 7044215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 9632282 - 9632324
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||    
T  9632282 tctcgatgaatattttcaaaatatcaaatttttataatttttt 9632324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 14583853 - 14583815
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  14583853 gatgagtattttcaaaatatcaaattttcatgatttttt 14583815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 23849741 - 23849787
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| | |||||| |||||| |||||||||||||||||||||||    
T  23849741 tctcgataaatatttttaaaatatcaaattttcataattttttctaa 23849787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 36632128 - 36632086
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||| |||||||||||||||||| ||| |||||||||||||||    
T  36632128 tctcaatgagtattttcaaaatatcaatttttcataatttttt 36632086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 40204857 - 40204815
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||    
T  40204857 tctcgatgaatattttcaaaatatcaaatttttataatttttt 40204815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 44871457 - 44871503
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||| ||||||||||| ||||||  ||||||||||||||||||||||    
T  44871457 tctcaatgagtattttaaaaatataaaattttcataattttttctaa 44871503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 19817461 - 19817507
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  19817461 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 19817507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 48448644 - 48448690
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  48448644 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 48448690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 46242416 - 46242372
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttct 50  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  46242416 tctcgatgagtattttcaaaatatcaaattttcataattttttct 46242372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 32345721 - 32345678
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  32345721 tctcgatgagtattttcaaaatatcaaattttcataattttttc 32345678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 35265759 - 35265716
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  35265759 tctcgatgagtattttcaaaatatcaaattttcataattttttc 35265716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 36820002 - 36820045
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  36820002 tctcgatgagtattttcaaaatatcaaattttcataattttttc 36820045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 40232054 - 40232097
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  40232054 tctcgatgagtattttcaaaatatcaaattttcataattttttc 40232097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 9173274 - 9173232
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  9173274 tctcgatgagtattttcaaaatatcaaattttcataatttttt 9173232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 18756719 - 18756761
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  18756719 gatgagtattttcaaaatatcaaattttcataattttttctaa 18756761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 32972269 - 32972227
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  32972269 gatgagtattttcaaaatatcaaattttcataattttttctaa 32972227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 40818635 - 40818589
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||    
T  40818635 tctcaatgagtattttcaaaatatcaaattttcataattttttctaa 40818589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 41844895 - 41844941
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  41844895 tctcgatgagtattttcaaaatatcaaattttcataatttttcctaa 41844941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 29247753 - 29247794
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  29247753 tctcgatgagtattttcaaaatatcaaattttcataattttt 29247794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 16807084 - 16807041
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  16807084 tctcgatgagtattttcaaaatatctaattttcataattttttc 16807041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 25273955 - 25273912
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  25273955 tctcgatgagtatttttaaaatatcaaattttcataattttttc 25273912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 27621233 - 27621190
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||| | ||||||||||||||||||||    
T  27621233 tctcgatgagtattttcaaaaaatcaaattttcataattttttc 27621190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 35693768 - 35693725
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  35693768 tctcgatgagtatttttaaaatatcaaattttcataattttttc 35693725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 3124084 - 3124038
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||||||| |||||| || ||||||||||||||||    
T  3124084 tctcgatgagtattttcaaattaccaatttatcataattttttctaa 3124038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 7313036 - 7312990
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  7313036 tctcgatgaatattttcaaaatatcaaatttttataattttttctaa 7312990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 9136600 - 9136554
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||||    
T  9136600 tctcgatgagtatttttaaaatatcaaattttcataaatttttctaa 9136554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 19327441 - 19327487
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||||    
T  19327441 tctcgatgagtatttttaaaatatcaaattttcatgattttttctaa 19327487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 32222676 - 32222722
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||| |||||| | |||||||||||||||||||||    
T  32222676 tctcgatgagtatttttaaaatatcgaattttcataattttttctaa 32222722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 37100964 - 37100922
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||| |||||||||||||||||| |||||||||||||||||||    
T  37100964 tctctatgagtattttcaaaatatcaaattttcataatttttt 37100922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 38441943 - 38441981
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  38441943 gatgagtattttcaaaatatcaaattttcataatttttt 38441981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 31496583 - 31496542
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  31496583 tctcgatgactattttcaaaatatcaaattttcataattttt 31496542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 40665706 - 40665661
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttcta 51  Q
    |||||||||||||||| |||||| ||||||||||| ||||||||||    
T  40665706 tctcgatgagtattttgaaaatatcaaattttcatgattttttcta 40665661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 38850830 - 38850874
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||    
T  38850830 tcgataagtattttaaaaatatcaaattttcataattttttctaa 38850874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 23734296 - 23734343
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaag 53  Q
    ||||||||| |||||| |||||| |||||||| |||||||||||||||    
T  23734296 tctcgatgaatatttttaaaatatcaaatttttataattttttctaag 23734343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 38069177 - 38069220
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||| |||||| |||||| ||||||||||||||||||||    
T  38069177 tctcgatgaatatttttaaaatatcaaattttcataattttttc 38069220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 4033422 - 4033384
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  4033422 gatgaatattttcaaaatactaaattttcataatttttt 4033384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 4620191 - 4620236
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||| |||||||||||||| |||||||| ||||||||||||||    
T  4620191 tctcgatgggtattttcaaaatatcaaatttt-ataattttttctaa 4620236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 26203188 - 26203234
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| |||||| ||||||  ||||||||||||||||||||||    
T  26203188 tctcgatgaatattttaaaaatattaaattttcataattttttctaa 26203234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 27248783 - 27248737
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| | ||||||||||||| |||||||| ||||||||||||||    
T  27248783 tctcgataaatattttcaaaatatcaaatttttataattttttctaa 27248737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 30462159 - 30462117
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||| |||| ||||||||||||| |||||||||||||||||||    
T  30462159 tctcaatgaatattttcaaaatatcaaattttcataatttttt 30462117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 38353536 - 38353494
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||||||||||||||| ||||||  ||||||||||||||||||    
T  38353536 tctcgatgagtatttttaaaatataaaattttcataatttttt 38353494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 39173962 - 39174004
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||    
T  39173962 gatgaatattttctaaatatcaaattttcataattttttctaa 39174004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 27045542 - 27045501
Alignment:
Q  7 ctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||||||| ||||||||||||| |||||||| ||||||||||    
T  27045542 ctcgatgaatattttcaaaatatcaaatttttataatttttt 27045501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 28016241 - 28016286
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttcta 51  Q
    ||||| ||| |||||| |||||| ||||||||||||||||||||||    
T  28016241 tctcgttgaatatttttaaaatatcaaattttcataattttttcta 28016286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 41007894 - 41007853
Alignment:
Q  7 ctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||||||| |||| |||||||| |||||||||||||||||||    
T  41007894 ctcgatgaatattatcaaaatatcaaattttcataatttttt 41007853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 47713365 - 47713328
Alignment:
Q  11 atgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  47713365 atgagtattttcaaaatatcaaattgtcataatttttt 47713328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 36404862 - 36404818
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| ||||||||||||| ||||||||  |||||||||||||    
T  36404862 tcgatgaatattttcaaaatatcaaatttttctaattttttctaa 36404818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 47080745 - 47080789
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| |||||| |||||| |||||||| ||||||||||||||    
T  47080745 tcgatgaatatttttaaaatatcaaatttttataattttttctaa 47080789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 10109353 - 10109307
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  10109353 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 10109307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 30699387 - 30699433
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  30699387 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 30699433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 32673874 - 32673920
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  32673874 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 32673920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 35117402 - 35117448
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  35117402 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 35117448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 2141694 - 2141737
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  2141694 tctcgatgagtattttcaaaatatcaaattttcataattttttc 2141737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 2397896 - 2397939
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  2397896 tctcgatgagtattttcaaaatatcaaattttcataattttttc 2397939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 2656612 - 2656569
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  2656612 tctcgatgagtattttcaaaatatcaaattttcataattttttc 2656569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 6188598 - 6188555
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  6188598 tctcgatgagtattttcaaaatatcaaattttcataattttttc 6188555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 17496270 - 17496227
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  17496270 tctcgatgagtattttcaaaatatcaaattttcataattttttc 17496227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 24825291 - 24825334
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  24825291 tctcgatgagtattttcaaaatatcaaattttcataattttttc 24825334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 28483163 - 28483206
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  28483163 tctcgatgagtattttcaaaatatcaaattttcataattttttc 28483206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 29795576 - 29795619
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  29795576 tctcgatgagtattttcaaaatatcaaattttcataattttttc 29795619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 2667267 - 2667225
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  2667267 tctcgatgagtattttcaaaatatcaaattttcataatttttt 2667225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 9022966 - 9023008
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  9022966 tctcgatgagtattttcaaaatatcaaattttcataatttttt 9023008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 26210873 - 26210919
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  26210873 tctcgatgaatattttcaaaatatcaaattttcataattttttctaa 26210919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 10105937 - 10105982
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttcta 51  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  10105937 tctcgatgaatattttcaaaatatcaaattttcataattttttcta 10105982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 29514968 - 29514927
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  29514968 tctcgatgagtattttcaaaatatcaaattttcataattttt 29514927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 995689 - 995732
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  995689 tctcgatgagtatttttaaaatatcaaattttcataattttttc 995732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 2913023 - 2913066
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||    
T  2913023 tctcgataagtattttcaaaatatcaaattttcataattttttc 2913066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 49
Target Start/End: Complemental strand, 24798484 - 24798445
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  24798484 gatgagtattttcaaaatatcaaattttcataattttttc 24798445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 32541419 - 32541376
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  32541419 tctcgatgagtatttttaaaatatcaaattttcataattttttc 32541376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 12677105 - 12677147
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||| ||||||||    
T  12677105 tctcgatgagtattttcaaaatatcaaattttcacaatttttt 12677147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 31948584 - 31948538
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| || |||||||||||| |||||||||||||||||||||||    
T  31948584 tctcgatcagaattttcaaaatatcaaattttcataattttttctaa 31948538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 6142449 - 6142406
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||| |||||| |||||| ||||||||||||||||||||    
T  6142449 tctcgatgaatatttttaaaatatcaaattttcataattttttc 6142406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 16691717 - 16691753
Alignment:
Q  16 tattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||  ||||||||||||||||||||||    
T  16691717 tattttcaaaatattaaattttcataattttttctaa 16691753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 16969504 - 16969548
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaa-ttttcataattttttc 49  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||    
T  16969504 tctcgatgagtattttcaaaatattaaatttttcataattttttc 16969548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 14639653 - 14639607
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  14639653 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 14639607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 40080107 - 40080153
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  40080107 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 40080153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 9936826 - 9936783
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  9936826 tctcgatgagtattttcaaaatatcaaattttcataattttttc 9936783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 14057834 - 14057877
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  14057834 tctcgatgagtattttcaaaatatcaaattttcataattttttc 14057877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 14633133 - 14633176
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  14633133 tctcgatgagtattttcaaaatatcaaattttcataattttttc 14633176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 19344637 - 19344594
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  19344637 tctcgatgagtattttcaaaatatcaaattttcataattttttc 19344594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 30352009 - 30351966
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  30352009 tctcgatgagtattttcaaaatatcaaattttcataattttttc 30351966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 30721623 - 30721580
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  30721623 tctcgatgagtattttcaaaatatcaaattttcataattttttc 30721580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 31191115 - 31191072
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  31191115 tctcgatgagtattttcaaaatatcaaattttcataattttttc 31191072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 41263067 - 41263024
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  41263067 tctcgatgagtattttcaaaatatcaaattttcataattttttc 41263024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 967320 - 967366
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||    
T  967320 tctcgatgagtattttcaaaatatcaaatttttataattttttctaa 967366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 1098301 - 1098343
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  1098301 tctcgatgagtattttcaaaatatcaaattttcataatttttt 1098343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 1831190 - 1831236
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  1831190 tctcgatgagtattttcaaaatatcaaattttcataatttttcctaa 1831236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 1918768 - 1918722
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  1918768 tctcgatgaatattttcaaaatatcaaattttcataattttttctaa 1918722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 4152248 - 4152202
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||    
T  4152248 tctcgatgagtattttcaaaatatcagattttcataattttttctaa 4152202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 13548339 - 13548381
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  13548339 tctcgatgagtattttcaaaatatcaaattttcataatttttt 13548381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 14140044 - 14140090
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  14140044 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 14140090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 14355625 - 14355667
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  14355625 tctcgatgagtattttcaaaatatcaaattttcataatttttt 14355667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 26802039 - 26801993
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  26802039 tctcgatgaatattttcaaaatatcaaattttcataattttttctaa 26801993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 26809589 - 26809543
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  26809589 tctcgatgaatattttcaaaatatcaaattttcataattttttctaa 26809543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 32110580 - 32110534
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  32110580 tctcgattagtattttcaaaatatcaaattttcataattttttctaa 32110534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 32473960 - 32473918
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  32473960 tctcgatgagtattttcaaaatatcaaattttcataatttttt 32473918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 34169955 - 34170001
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  34169955 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 34170001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 39104217 - 39104171
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  39104217 tctcgatgagtattttcaagatatcaaattttcataattttttctaa 39104171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 40316657 - 40316703
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  40316657 tctcgatgagtattttcaaaatatcaaattttcataatttttcctaa 40316703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 41042775 - 41042729
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  41042775 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 41042729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 28143054 - 28143094
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttt 46  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  28143054 tctcgatgagtattttcaaaatatcaaattttcataatttt 28143094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 1781083 - 1781040
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  1781083 tctcgatgagtatttttaaaatatcaaattttcataattttttc 1781040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 14607495 - 14607452
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  14607495 tctcgatgagtatttttaaaatatcaaattttcataattttttc 14607452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 20022986 - 20023029
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  20022986 tctcgatgagtattttcaaaatatcaaatttttataattttttc 20023029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 30211679 - 30211636
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  30211679 tctcgatgagtattttcaaaatatcaaatttttataattttttc 30211636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 2799758 - 2799804
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||    
T  2799758 tctcaatgagtattttcaaaatataaaattttcataattttttctaa 2799804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 2805924 - 2805970
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||| ||||||||||||||||||  ||||||||||||||||||||||    
T  2805924 tctcaatgagtattttcaaaatataaaattttcataattttttctaa 2805970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 10465233 - 10465187
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  10465233 tctcgatgagtattttcaaaatatcaatttttcatgattttttctaa 10465187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 20502986 - 20502944
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| ||||||| |||||||||||    
T  20502986 tctcgatgagtattttcaaaatatcaaatttacataatttttt 20502944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 26824616 - 26824570
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||    
T  26824616 tctcgatgaatattttcaaaatatcaaattttcataatttttactaa 26824570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 27675666 - 27675712
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  27675666 tctcgatgaatattttcaaaatatcaaattttcatgattttttctaa 27675712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 30788331 - 30788373
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  30788331 tctcgatgaatattttcaaaatatcaaattttcataatttttt 30788373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 33402529 - 33402487
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| ||||||||| |||||||||    
T  33402529 tctcgatgagtattttcaaaataacaaattttcgtaatttttt 33402487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 34347597 - 34347643
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  34347597 tctcggtgaatattttcaaaatatcaaattttcataattttttctaa 34347643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 40365826 - 40365780
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||| |||||||||||||||||| |||||||||||||||||| ||||    
T  40365826 tctcaatgagtattttcaaaatatcaaattttcataatttttcctaa 40365780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 40797010 - 40796964
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  40797010 tctcgatgagtattttcaaaatatcaaattttcatgatttttcctaa 40796964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 41410884 - 41410838
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||| |||||| |||||||||||||||||| ||||    
T  41410884 tctcgatgagtatttttaaaatatcaaattttcataatttttcctaa 41410838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 36578722 - 36578758
Alignment:
Q  16 tattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||| |||||||||||||||||||||||    
T  36578722 tattttcaaaatatcaaattttcataattttttctaa 36578758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 4047367 - 4047414
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaaggt 55  Q
    |||||| ||||||| |||||| ||||||||||||||||||| ||||||    
T  4047367 tcgatgcgtatttttaaaatatcaaattttcataattttttataaggt 4047414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 20040353 - 20040310
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||    
T  20040353 tctcgatgaatattttcaaaatatcaaattttcataatcttttc 20040310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 1831477 - 1831519
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||    
T  1831477 tctcgatgaatattttcaaaatatcaaatttttataatttttt 1831519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 6996107 - 6996149
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||    
T  6996107 tctcgatgaatattttcaaaatatcaaatttttataatttttt 6996149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 21961362 - 21961316
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| |||||||||||||  ||||||| ||||||||||||||    
T  21961362 tctcgatgaatattttcaaaatattaaattttaataattttttctaa 21961316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 27674343 - 27674389
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| |||||||||||||  ||||||||||||||||| ||||    
T  27674343 tctcgatgaatattttcaaaatattaaattttcataatttttcctaa 27674389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 40316944 - 40316986
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||    
T  40316944 tctcgatgaatattttcaaaatatcaaatttttataatttttt 40316986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 41410597 - 41410555
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||    
T  41410597 tctcgatgaatattttcaaaatatcaaatttttataatttttt 41410555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 12359956 - 12359915
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    ||||||||| ||||||||||||| |||||||| |||||||||    
T  12359956 tctcgatgaatattttcaaaatatcaaatttttataattttt 12359915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Original strand, 21031765 - 21031806
Alignment:
Q  11 atgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||| |||||||| ||||||||||||| ||||||||||||||    
T  21031765 atgaatattttcagaataccaaatttttataattttttctaa 21031806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 8627263 - 8627307
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||| |||||||||||||||  ||||||| ||||||||||||||    
T  8627263 tcgataagtattttcaaaatataaaatttttataattttttctaa 8627307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 39035688 - 39035728
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||| |||||||||||||||  ||||||||||||||||||    
T  39035688 tcgatcagtattttcaaaatatgaaattttcataatttttt 39035728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 17492793 - 17492839
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  17492793 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 17492839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 29821176 - 29821222
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  29821176 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 29821222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 30386957 - 30386999
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30386957 tctcgatgagtattttcaaaataccaaattttcataatttttt 30386999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 3708379 - 3708422
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  3708379 tctcgatgagtattttcaaaatatcaaattttcataattttttc 3708422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 10384974 - 10385017
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  10384974 tctcgatgagtattttcaaaatatcaaattttcataattttttc 10385017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 28914494 - 28914537
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  28914494 tctcgatgagtattttcaaaatatcaaattttcataattttttc 28914537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 39171084 - 39171127
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  39171084 tctcgatgagtattttcaaaatatcaaattttcataattttttc 39171127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 43447291 - 43447334
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  43447291 tctcgatgagtattttcaaaatatcaaattttcataattttttc 43447334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 46608339 - 46608382
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  46608339 tctcgatgagtattttcaaaatatcaaattttcataattttttc 46608382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 48380882 - 48380925
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  48380882 tctcgatgagtattttcaaaatatcaaattttcataattttttc 48380925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 55631812 - 55631769
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  55631812 tctcgatgagtattttcaaaatatcaaattttcataattttttc 55631769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 1615665 - 1615711
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  1615665 tctcgatgaatattttcaaaatatcaaattttcataattttttctaa 1615711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 6520561 - 6520607
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  6520561 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 6520607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 8525353 - 8525307
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||    
T  8525353 tctcgatgggtattttcaaaatatcaaattttcataattttttctaa 8525307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 24334315 - 24334269
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  24334315 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 24334269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 24505637 - 24505683
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  24505637 tctcgatgagtattttcaaaatatcaaattttcataatttttcctaa 24505683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 31152787 - 31152829
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  31152787 tctcgatgagtattttcaaaatatcaaattttcataatttttt 31152829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 37164142 - 37164184
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  37164142 tctcgatgagtattttcaaaatatcaaattttcataatttttt 37164184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 39332767 - 39332725
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  39332767 tctcgatgagtattttcaaaatatcaaattttcataatttttt 39332725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 39376805 - 39376759
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  39376805 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 39376759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 43047513 - 43047555
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  43047513 tctcgatgagtattttcaaaatatcaaattttcataatttttt 43047555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 48079985 - 48079939
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  48079985 tctcgatgagtattttcaaaatatcaaattttcataatttttcctaa 48079939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 51306171 - 51306125
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  51306171 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 51306125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 48652599 - 48652640
Alignment:
Q  7 ctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  48652599 ctcgatgagtattttcaaaatatcaaattttcataatttttt 48652640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10304925 - 10304878
Alignment:
Q  1 attattctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||    
T  10304925 attattctcgatgaatattttcaaaatattaaattttcataatttttt 10304878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 37667711 - 37667668
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  37667711 tctcaatgagtattttcaaaatatcaaattttcataattttttc 37667668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 40411545 - 40411502
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  40411545 tctcaatgagtattttcaaaatatcaaattttcataattttttc 40411502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 1613155 - 1613109
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||| || |||||||||||    
T  1613155 tctcgatgagtattttcaaaatatcaaatttttattattttttctaa 1613109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 2806108 - 2806062
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||| ||||| |||||||||||||||||| ||||    
T  2806108 tctcgatgagtattttctaaatatcaaattttcataatttttcctaa 2806062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 4271947 - 4271909
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  4271947 gatgagtattttcaaaatatcaaattttcataatttttt 4271909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 23605839 - 23605793
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||||||||||  |||||||||| |||||||||||    
T  23605839 tctcgatgagtattttcaaaatattaaattttcattattttttctaa 23605793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 28899008 - 28898962
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  28899008 tctcgatgaatattttcaaaatatcaaattttcatgattttttctaa 28898962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 28909777 - 28909731
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||    
T  28909777 tctcgatgagtattttcaaaatatcatattttcatgattttttctaa 28909731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 28988331 - 28988285
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||    
T  28988331 tctcgatgagtatttttaaaatatcaaaatttcataattttttctaa 28988285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 44210275 - 44210321
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  44210275 tctcgatgaatattttcaaaatatcaaattttcatgattttttctaa 44210321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 47834081 - 47834039
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  47834081 tctcgatgagtattttcaaaatataaaattttcataatttttt 47834039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 52818623 - 52818581
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  52818623 gatgagtattttcaaaatattaaattttcataattttttctaa 52818581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 54802995 - 54802949
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||| || ||||||||||||||    
T  54802995 tctcgatgagtattttcaaaatatcaaatattaataattttttctaa 54802949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 11260828 - 11260869
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  11260828 tctcgatgagtatttttaaaatatcaaattttcataattttt 11260869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 42862229 - 42862184
Alignment:
Q  7 ctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||    
T  42862229 ctcgatgaatattttcaaaatataaaattttcataattttttctaa 42862184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 39260480 - 39260524
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||    
T  39260480 tcgatgaatattttcaaaatatcaaatttttataattttttctaa 39260524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 6829410 - 6829364
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaag 53  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||    
T  6829410 tctcgatgaatattttcaaaatatcaaatttt-ataattttttctaag 6829364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 29424775 - 29424818
Alignment:
Q  9 cgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||| ||||||  ||||||||||||||||||||||    
T  29424775 cgatgagtatttttaaaatattaaattttcataattttttctaa 29424818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 37380961 - 37381008
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaa-ttttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  37380961 tctcgatgaatattttcaaaatatcaaatttttcataattttttctaa 37381008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 50685049 - 50685092
Alignment:
Q  9 cgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||    
T  50685049 cgatgagtattttcaaaatattaaattttcatatttttttctaa 50685092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 31657293 - 31657248
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||||    
T  31657293 tctcgatgagtattttcaaaatatc-aattttcatgattttttctaa 31657248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 39195616 - 39195658
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| |||||||||||||  ||||||||||||||||||    
T  39195616 tctcgatgaatattttcaaaatattaaattttcataatttttt 39195658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 18881294 - 18881253
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    ||||||||| ||||||||||||| |||||||| |||||||||    
T  18881294 tctcgatgaatattttcaaaatatcaaatttttataattttt 18881253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 38963921 - 38963967
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  38963921 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 38963967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 45036489 - 45036535
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  45036489 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 45036535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 26436622 - 26436578
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  26436622 tcgatgagtattttcaaaatatcaaattttcataattttttctaa 26436578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 1749109 - 1749066
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  1749109 tctcgatgagtattttcaaaatatcaaattttcataattttttc 1749066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 5096374 - 5096417
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  5096374 tctcgatgagtattttcaaaatatcaaattttcataattttttc 5096417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 8373560 - 8373603
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  8373560 tctcgatgagtattttcaaaatatcaaattttcataattttttc 8373603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 9273478 - 9273525
Alignment:
Q  5 ttctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  9273478 ttctcgatgagtattttcaaaatatcaaattttcataatttttcctaa 9273525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 12209115 - 12209158
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  12209115 tctcgatgagtattttcaaaatatcaaattttcataattttttc 12209158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 37987873 - 37987830
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  37987873 tctcgatgagtattttcaaaatatcaaattttcataattttttc 37987830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 41436958 - 41437001
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  41436958 tctcgatgagtattttcaaaatatcaaattttcataattttttc 41437001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 6730040 - 6729994
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  6730040 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 6729994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 7601334 - 7601288
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  7601334 tctcgatgagtattttcaaaatatcaaattttcataatttttcctaa 7601288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 7724548 - 7724506
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  7724548 tctcgatgagtattttcaaaatatcaaattttcataatttttt 7724506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 8896397 - 8896439
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  8896397 tctcgatgagtattttcaaaatatcaaattttcataatttttt 8896439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 11277660 - 11277702
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  11277660 tctcgatgagtattttcaaaatatcaaattttcataatttttt 11277702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 15177495 - 15177537
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  15177495 tctcgatgagtattttcaaaatatcaaattttcataatttttt 15177537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 16646372 - 16646414
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  16646372 tctcgatgagtattttcaaaatatcaaattttcataatttttt 16646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 22718480 - 22718434
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  22718480 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 22718434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 25627149 - 25627191
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  25627149 tctcgatgagtattttcaaaatatcaaattttcataatttttt 25627191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 37317002 - 37317048
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  37317002 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 37317048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 41319861 - 41319819
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  41319861 tctcgatgagtattttcaaaatatcaaattttcataatttttt 41319819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 31603353 - 31603312
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  31603353 tctcgatgagtattttcaaaatatcaaattttcataattttt 31603312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 18504598 - 18504642
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttct 50  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||    
T  18504598 tctcgataagtattttcaaaatatcaaattttcataattttttct 18504642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 20682770 - 20682814
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  20682770 tcgatgagtattttcaaaatatcaaattttcatgattttttctaa 20682814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 42754290 - 42754250
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  42754290 tcgatgagtattttcaaaatatcaaattttcataatttttt 42754250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 4137535 - 4137578
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  4137535 tctcgatgagtatttttaaaatatcaaattttcataattttttc 4137578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 10333515 - 10333472
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| |||||| |||||||||||||    
T  10333515 tctcgatgagtattttcaaaatatcaaattgtcataattttttc 10333472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 34883216 - 34883263
Alignment:
Q  5 ttctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||    
T  34883216 ttctcgatgaatattttcaaaatattaaattttcataattttttctaa 34883263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 25766570 - 25766616
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  25766570 tctcgatgaatattttcaaaatatcaaatttttataattttttctaa 25766616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 40471862 - 40471904
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  40471862 tctcgatgagtattttcataatatcaaattttcataatttttt 40471904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 41575688 - 41575734
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  41575688 tctcgatgaatattttcaaaatatcaaattttcatgattttttctaa 41575734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 43328734 - 43328696
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  43328734 gatgagtattttcaaaatatcaaattttcataatttttt 43328696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 6075251 - 6075296
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttcta 51  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||    
T  6075251 tctcgataagtattttcaaagtatcaaattttcataattttttcta 6075296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 16126019 - 16125978
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  16126019 tctcgatgagtattttcaaaatatcaaattttcgtaattttt 16125978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 16127717 - 16127676
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    ||||||| ||||||||||||||| ||||||||||||||||||    
T  16127717 tctcgataagtattttcaaaatatcaaattttcataattttt 16127676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 16333606 - 16333647
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  16333606 tctcgatgagtattttcaaaatatcaaattttcgtaattttt 16333647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 20917864 - 20917821
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||| | |||||||| |||||||||||    
T  20917864 tctcgatgagtattttcaaaacatcaaattttaataattttttc 20917821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 8924672 - 8924630
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||| |||||| |||||||| ||||||||||||||    
T  8924672 gatgagtatttttaaaatatcaaatttttataattttttctaa 8924630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 11383978 - 11383936
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||| || ||||||||||||| |||||||||    
T  11383978 gatgagtattttcaaactatcaaattttcataagtttttctaa 11383936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 22839062 - 22839020
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||    
T  22839062 tctcgatgaatattttcaaaatatcaaatttttataatttttt 22839020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 24853375 - 24853417
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||    
T  24853375 tctcgatgaatattttcaaaatatcaaattttgataatttttt 24853417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 25762320 - 25762366
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| |||||| |||||| |||||||| ||||||||||||||    
T  25762320 tctcgatgaatatttttaaaatatcaaatttttataattttttctaa 25762366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 44022394 - 44022440
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||| |||| ||||||||||||| |||||||| ||||||||||||||    
T  44022394 tctcaatgaatattttcaaaatatcaaatttttataattttttctaa 44022440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 15771019 - 15770975
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttct 50  Q
    ||||||||| |||||| |||||| |||||||| ||||||||||||    
T  15771019 tctcgatgaatatttttaaaatatcaaatttttataattttttct 15770975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 4489187 - 4489233
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  4489187 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 4489233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 5117376 - 5117330
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  5117376 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 5117330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 23393358 - 23393404
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  23393358 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 23393404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 44963614 - 44963568
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  44963614 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 44963568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 52688657 - 52688703
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  52688657 tctcgatgagtattttcaaaatatcaaattttcataattttttctaa 52688703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 5606333 - 5606290
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  5606333 tctcgatgagtattttcaaaatatcaaattttcataattttttc 5606290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 5945891 - 5945934
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  5945891 tctcgatgagtattttcaaaatatcaaattttcataattttttc 5945934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 6017391 - 6017348
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  6017391 tctcgatgagtattttcaaaatatcaaattttcataattttttc 6017348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 7075272 - 7075229
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  7075272 tctcgatgagtattttcaaaatatcaaattttcataattttttc 7075229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 10100455 - 10100412
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  10100455 tctcgatgagtattttcaaaatatcaaattttcataattttttc 10100412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 10124235 - 10124278
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  10124235 tctcgatgagtattttcaaaatatcaaattttcataattttttc 10124278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 36035812 - 36035855
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  36035812 tctcgatgagtattttcaaaatatcaaattttcataattttttc 36035855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 44741469 - 44741512
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  44741469 tctcgatgagtattttcaaaatatcaaattttcataattttttc 44741512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 52749407 - 52749450
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  52749407 tctcgatgagtattttcaaaatatcaaattttcataattttttc 52749450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 8048690 - 8048644
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  8048690 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 8048644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 8250781 - 8250739
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  8250781 gatgagtattttcaaaatatcaaattttcataattttttctaa 8250739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 28490286 - 28490332
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  28490286 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 28490332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 31932120 - 31932078
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  31932120 tctcgatgagtattttcaaaatatcaaattttcataatttttt 31932078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 33526100 - 33526058
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  33526100 gatgagtattttcaaaataacaaattttcataattttttctaa 33526058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 40058909 - 40058863
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  40058909 tctcgataagtattttcaaaatatcaaattttcataattttttctaa 40058863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 40883537 - 40883579
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  40883537 tctcgatgagtattttcaaaatatcaaattttcataatttttt 40883579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 41414329 - 41414375
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  41414329 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 41414375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 41855663 - 41855617
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  41855663 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 41855617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 50014503 - 50014457
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||    
T  50014503 tctcgatgagtattttcaaaatatcaaattttcatgattttttctaa 50014457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 3138718 - 3138763
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttcta 51  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||    
T  3138718 tctcgatgaatattttcaaaatatcaaattttcataattttttcta 3138763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 43453106 - 43453061
Alignment:
Q  7 ctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||    
T  43453106 ctcgatgagtattttcaaaatatcaaatttttataattttttctaa 43453061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 2138969 - 2138929
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  2138969 tcgatgagtattttcaaaatatcaaattttcataatttttt 2138929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 9334511 - 9334553
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||| ||||||||||| |||||||||||    
T  9334511 gatgagtattttcaaaatatcaaattttcatgattttttctaa 9334553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 9358284 - 9358326
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||| ||||||||||| |||||||||||    
T  9358284 gatgagtattttcaaaatatcaaattttcatgattttttctaa 9358326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 31651843 - 31651801
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  31651843 tctcgatgagtattttcaaaatatcaatttttcataatttttt 31651801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 44240645 - 44240691
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||| || |||||||||||    
T  44240645 tctcgatgagtattttcaaaatatcaaatttttatgattttttctaa 44240691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 45299444 - 45299486
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  45299444 tctcgatgagtattttcaaaatatcaagttttcataatttttt 45299486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 48389192 - 48389234
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||||||| ||||||||||| |||||||    
T  48389192 tctcgatgagtattttcaaaatatcaaattttcatgatttttt 48389234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 49903627 - 49903582
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||    
T  49903627 tctcgatgagtattttcaaaatatc-aattttcataattttttctaa 49903582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 26476951 - 26476910
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  26476951 tctcaatgagtattttcaaaatatcaaattttcataattttt 26476910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 22328097 - 22328053
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttct 50  Q
    ||||||||| |||||||||||||  ||||||||||||||||||||    
T  22328097 tctcgatgaatattttcaaaatattaaattttcataattttttct 22328053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Original strand, 26543997 - 26544037
Alignment:
Q  9 cgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  26543997 cgatgagtattttcaaagtaccaaattttcttaattttttc 26544037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 38786886 - 38786842
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||    
T  38786886 tcgatgagtatttttaaaatatcaatttttcataattttttctaa 38786842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 8980800 - 8980846
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| |||||| |||| | |||||||||||||||||||||||    
T  8980800 tctcgatgaatatttttaaaaaaacaaattttcataattttttctaa 8980846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 10648140 - 10648098
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| |||||| |||||| |||||||||||||||||||    
T  10648140 tctcgatgattatttttaaaatatcaaattttcataatttttt 10648098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 27462864 - 27462906
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||    
T  27462864 tctcgatgaatattttcaaaatatcaaatttttataatttttt 27462906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 37515472 - 37515426
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||| |||||| ||||||  ||||||||||||||||||||||    
T  37515472 tctcgatgaatatttttaaaatattaaattttcataattttttctaa 37515426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Original strand, 47912407 - 47912449
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| |||||| |||||| |||||||||||||||||||    
T  47912407 tctcgatgaatatttttaaaatatcaaattttcataatttttt 47912449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 48312154 - 48312200
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| |||||||| || ||| |||||||||||||||||||||||    
T  48312154 tctcgatcagtatttttaatatatcaaattttcataattttttctaa 48312200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 1821570 - 1821529
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttt 47  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||    
T  1821570 tctcgataagtattttcaaaatatcaaattttcgtaattttt 1821529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 26345348 - 26345300
Alignment:
Q  6 tctcgatgagtattttcaaaa--taccaaattttcataattttttctaa 52  Q
    ||||||||| |||||||||||  || |||||||||||||||||||||||    
T  26345348 tctcgatgaatattttcaaaaaatatcaaattttcataattttttctaa 26345300  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 13971698 - 13971658
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||| |||||| |||||| |||||||||||||||||||    
T  13971698 tcgatgattatttttaaaatatcaaattttcataatttttt 13971658  T

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Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 22575720 - 22575680
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||| ||||||||||||| |||||||| ||||||||||    
T  22575720 tcgatgactattttcaaaatatcaaatttttataatttttt 22575680  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 29253572 - 29253608
Alignment:
Q  13 gagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  29253572 gagtattttcaaaatactaaattttcatgattttttc 29253608  T

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Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 45265280 - 45265324
Alignment:
Q  8 tcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||| ||||||||||||| |||||||| ||||||||| ||||    
T  45265280 tcgatgaatattttcaaaatatcaaatttttataatttttgctaa 45265324  T

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Target: scaffold0221 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 5502 - 5545
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttc 49  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  5502 tctcgatgagtattttcaaaatatcaaattttcataattttttc 5545  T

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Target: scaffold1248 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 1394 - 1348
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  1394 tctcgatgagtattttcagaatatcaaattttcataattttttctaa 1348  T

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Target: scaffold0952 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 919 - 965
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  919 tctcgatgagtattttcagaatatcaaattttcataattttttctaa 965  T

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Target: scaffold0195 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 183 - 137
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  183 tctcgatgagtattttcaaaatatcaaattttcataatttttcctaa 137  T

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Target: scaffold0172 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 19673 - 19627
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||    
T  19673 tctcgatgagtattttcaaaatatcaaattttcataatttttcctaa 19627  T

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Target: scaffold0717 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 4126 - 4080
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaa 52  Q
    |||||||||||||||||| || | |||||||||||||||||||||||    
T  4126 tctcgatgagtattttcagaacatcaaattttcataattttttctaa 4080  T

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Target: scaffold0500 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 613 - 571
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    |||||||||||||||||||||||  ||||||||||||||||||    
T  613 tctcgatgagtattttcaaaatatgaaattttcataatttttt 571  T

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Target: scaffold0283 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 3125 - 3163
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  3125 gatgagtattttcaaaatatcaaattttcataatttttt 3163  T

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Target: scaffold0281 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 48
Target Start/End: Original strand, 13234 - 13272
Alignment:
Q  10 gatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  13234 gatgagtattttcaaaatatcaaattttcataatttttt 13272  T

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Target: scaffold0373 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 7010 - 7056
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataattttttctaag 53  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||    
T  7010 tctcgatgaatattttcaaaatatcaaatttt-ataattttttctaag 7056  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 392068 - 392026
Alignment:
Q  6 tctcgatgagtattttcaaaataccaaattttcataatttttt 48  Q
    ||||||||| |||||||||||||  ||||||||||||||||||    
T  392068 tctcgatgaatattttcaaaatattaaattttcataatttttt 392026  T

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