View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3665_high_7 (Length: 231)
Name: NF3665_high_7
Description: NF3665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3665_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 31069881 - 31069668
Alignment:
| Q |
13 |
catagggaaaactgaacggtgagattcaacattttgcaaatca-------tatcaaatgtagcatgtggtttattatcattacaaggaaaaatgagcttg |
105 |
Q |
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| T |
31069881 |
catagggaaaactgaacggtgagattcaacattttgcaaatcaagttttgtatcaaatgtagcatgtggtttattatcattacaaggaaaaatgagcttg |
31069782 |
T |
|
| Q |
106 |
aaaaccgtggtttggatcattcaaatgaacaccaatacgattttcaaagaagaacgtgacatgca----ttaacatattaaaagaacgtacggtaggata |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
31069781 |
aaaaccgtggtttggatcattcaaatgaacaccaatacgattttcaaacaagaacgtgacatgcattaattaacatattaaaagaacgtacggtaggata |
31069682 |
T |
|
| Q |
202 |
taaaaacacattaa |
215 |
Q |
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|||||||||||||| |
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| T |
31069681 |
taaaaacacattaa |
31069668 |
T |
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