View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3665_low_4 (Length: 316)
Name: NF3665_low_4
Description: NF3665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3665_low_4 |
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Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 20 - 297
Target Start/End: Complemental strand, 13674569 - 13674292
Alignment:
| Q |
20 |
gtacggacaaaggtagttaactatcaattatgtatggaaacaagaaccttgcaattaattaaaactgatgaaaatgggattgaaacaatggcattgcaga |
119 |
Q |
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| T |
13674569 |
gtacggacaaaggtagttaactatcaattatgtatggaaacaagaaccttgcaattgattgaaactgatgaaattgggattgaaacaatggcattgcaga |
13674470 |
T |
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| Q |
120 |
gtcaaaaagatnnnnnnnnncactctgctgggatcatttctatccattacattgttgatgcaccctacaggttcatgctagattacaagcctacttagct |
219 |
Q |
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| T |
13674469 |
gtcaaaaagataaaaaaaaacactctgctgggatcatttctatccattacattgttgatgcaccctacaggttcatgctagattacaagcctacttagct |
13674370 |
T |
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| Q |
220 |
tgaacaaaaacacaggcctgcgatgacttcagattaagccacacacaaactgctacaacaatgatcattacataccct |
297 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13674369 |
tgaacaaaaacacaagcctgcgatgacttcagattaagccacacacaaactgctacaacaatgatcattacataccct |
13674292 |
T |
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