View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3667_low_4 (Length: 241)
Name: NF3667_low_4
Description: NF3667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3667_low_4 |
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Alignment Details
Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 7 - 226
Target Start/End: Complemental strand, 530744 - 530525
Alignment:
| Q |
7 |
gattgaacccagagctagccttgcatgtggaatagaatcaactataatttgaaatgcaactgtgacaagagaccctccagatccaacattcataattggt |
106 |
Q |
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| T |
530744 |
gattgaacccagagctagccttgcatgtggaatagaatcaactataatttgaaatgcaactgtgacaagagaccctccagatccaacattcataattggt |
530645 |
T |
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| Q |
107 |
tctccatttgttatacacccatctggaaaaatagcgaatccggaaggaagcagagtgagacgacttgagtcgccgccattcaggatttcatgcattgtag |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
530644 |
cctccatttgttatacacccatctggaaaaatagcgaatccggaaggaagcagagtgagacgacttgagtcgccgccattcaggatttcatgcattgtag |
530545 |
T |
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| Q |
207 |
gtatttgcacaggcgcatat |
226 |
Q |
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|||||||||||||||||||| |
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| T |
530544 |
gtatttgcacaggcgcatat |
530525 |
T |
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