View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3667_low_5 (Length: 240)
Name: NF3667_low_5
Description: NF3667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3667_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 28 - 226
Target Start/End: Original strand, 35774429 - 35774627
Alignment:
| Q |
28 |
tttcaatgagcatgtagctgccttacaatgtaaaaatataagtggtttactgtctttgattcctattgaccctcaaattctatttttaatatgaaaacaa |
127 |
Q |
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| T |
35774429 |
tttcaatgagcatgtagctgccttacaatgtaaaaatataagtggtttactgtctttgattcctatcgaccctcaaattctatttttaatatgaaaacaa |
35774528 |
T |
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| Q |
128 |
atattaagaacataaatagctttttgacatgtgcatccaacacaaataacttatagattttaagcgcttgtgtcataagttttcatatgattataagtg |
226 |
Q |
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||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35774529 |
atattaagaacatcaatagcttttcgacatgtgtatccaacacaaataacttatagattttaagcgcttgtgtcataagttttcatatgattataagtg |
35774627 |
T |
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