View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3670_low_3 (Length: 335)
Name: NF3670_low_3
Description: NF3670
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3670_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 191162 - 191479
Alignment:
| Q |
1 |
ttgcaacataataaggatcaacgatcccccttttgaaagtgctactaacaaaggagcatacattattaccaataaccccccaaaacatcttataaaagat |
100 |
Q |
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| T |
191162 |
ttgcaacataataaggatcaacgatcccccttttgaaagtgctactaacaaaggagcatacattattaccaataacctcccaaaacatcttataaaagat |
191261 |
T |
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| Q |
101 |
tggttggaattcatctagacctggaactttgtaggacttcatgctcatgagagcttgataaatctctttgttactaatgaacaccaataagcttgtcttg |
200 |
Q |
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| T |
191262 |
tggttggaattcatctagacctggaactttgtaggacttcatgctcatgagagcttgataaatctctttgttactaatgaacaccaataagcttgtcttg |
191361 |
T |
|
| Q |
201 |
tgcacttcccctagaggattaggatccacgatcatagtaggatgcacaatattttccttggaacaaaaaagatccttaaaataactttaaaacttcaatc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
191362 |
tgcacttcccctagaggattaggatccacgatcatagtaggatgcacaatattttccttggaacaaaaaagatccttaaaataactttaaaacttcaatc |
191461 |
T |
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| Q |
301 |
ttcaacaacattatttgt |
318 |
Q |
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|||||||||||||||||| |
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| T |
191462 |
ttcaacaacattatttgt |
191479 |
T |
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