View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3675-4-Insertion-3 (Length: 890)

Name: NF3675-4-Insertion-3
Description: NF3675-4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3675-4-Insertion-3
NF3675-4-Insertion-3
[»] chr4 (33 HSPs)
chr4 (8-361)||(6880034-6880393)
chr4 (447-888)||(6878972-6879405)
chr4 (360-437)||(6879459-6879536)
chr4 (363-445)||(23292972-23293054)
chr4 (363-445)||(49431016-49431099)
chr4 (386-445)||(54580009-54580068)
chr4 (360-441)||(21945491-21945572)
chr4 (372-441)||(28964238-28964307)
chr4 (386-441)||(29205458-29205513)
chr4 (363-445)||(2361961-2362043)
chr4 (391-438)||(12797331-12797378)
chr4 (360-431)||(16303266-16303337)
chr4 (390-437)||(42640547-42640594)
chr4 (391-441)||(4157168-4157218)
chr4 (391-441)||(4157455-4157505)
chr4 (386-440)||(12895265-12895319)
chr4 (391-445)||(34306790-34306844)
chr4 (360-441)||(35157975-35158056)
chr4 (364-445)||(38846998-38847079)
chr4 (360-431)||(30298934-30299006)
chr4 (360-431)||(30327802-30327874)
chr4 (386-429)||(6485613-6485656)
chr4 (360-431)||(11596352-11596423)
chr4 (391-438)||(16073413-16073460)
chr4 (386-441)||(40179626-40179681)
chr4 (386-440)||(8423709-8423763)
chr4 (385-445)||(13307890-13307950)
chr4 (364-431)||(3947766-3947833)
chr4 (364-431)||(12895116-12895183)
chr4 (360-431)||(19482656-19482727)
chr4 (390-445)||(36509078-36509133)
chr4 (364-431)||(50280873-50280942)
chr4 (392-445)||(35161056-35161109)
[»] chr8 (30 HSPs)
chr8 (360-445)||(20873057-20873142)
chr8 (360-431)||(22651964-22652035)
chr8 (364-445)||(5813584-5813665)
chr8 (360-445)||(22595982-22596067)
chr8 (360-437)||(24613509-24613585)
chr8 (360-429)||(29510306-29510375)
chr8 (360-445)||(36450740-36450825)
chr8 (386-438)||(4948666-4948718)
chr8 (386-445)||(40332205-40332264)
chr8 (370-431)||(8342970-8343031)
chr8 (364-437)||(8343308-8343381)
chr8 (360-431)||(15816129-15816200)
chr8 (358-441)||(31556983-31557065)
chr8 (386-431)||(2572056-2572101)
chr8 (386-431)||(25566855-25566900)
chr8 (360-428)||(25192350-25192418)
chr8 (386-445)||(3025565-3025624)
chr8 (360-431)||(13436964-13437035)
chr8 (390-441)||(18407737-18407788)
chr8 (360-431)||(30271291-30271362)
chr8 (365-430)||(4298887-4298952)
chr8 (364-436)||(13844591-13844663)
chr8 (386-445)||(26434194-26434253)
chr8 (386-433)||(30077385-30077432)
chr8 (386-441)||(33405374-33405429)
chr8 (360-430)||(22197743-22197813)
chr8 (392-445)||(4786324-4786377)
chr8 (400-445)||(15023243-15023288)
chr8 (386-435)||(18170478-18170527)
chr8 (386-435)||(18634046-18634095)
[»] chr1 (47 HSPs)
chr1 (360-445)||(46348369-46348454)
chr1 (360-441)||(22881606-22881687)
chr1 (364-441)||(22515877-22515954)
chr1 (360-441)||(38078651-38078732)
chr1 (386-445)||(18337343-18337402)
chr1 (360-441)||(1815245-1815326)
chr1 (360-445)||(37598820-37598904)
chr1 (390-443)||(51410043-51410096)
chr1 (386-441)||(40258923-40258978)
chr1 (362-431)||(113289-113358)
chr1 (360-437)||(31672889-31672966)
chr1 (360-436)||(9103628-9103703)
chr1 (360-435)||(42359445-42359520)
chr1 (361-431)||(1486709-1486779)
chr1 (363-437)||(19058850-19058924)
chr1 (360-431)||(31694710-31694783)
chr1 (360-438)||(35702581-35702659)
chr1 (386-431)||(24577186-24577231)
chr1 (386-445)||(18190094-18190153)
chr1 (386-441)||(21530703-21530758)
chr1 (361-431)||(40917740-40917808)
chr1 (386-437)||(41877464-41877515)
chr1 (360-430)||(6415002-6415072)
chr1 (360-441)||(13011205-13011287)
chr1 (360-438)||(36878449-36878527)
chr1 (360-426)||(48450592-48450658)
chr1 (386-431)||(1704992-1705037)
chr1 (388-445)||(5898252-5898309)
chr1 (386-431)||(6612171-6612216)
chr1 (360-441)||(13997871-13997952)
chr1 (390-427)||(18471318-18471355)
chr1 (390-431)||(47989515-47989556)
chr1 (386-430)||(28273089-28273133)
chr1 (392-444)||(29163368-29163420)
chr1 (360-431)||(18556456-18556527)
chr1 (390-437)||(21620973-21621020)
chr1 (399-442)||(24334694-24334737)
chr1 (386-445)||(40181885-40181944)
chr1 (386-440)||(5927331-5927385)
chr1 (360-431)||(5944269-5944342)
chr1 (387-429)||(21378593-21378635)
chr1 (383-445)||(30749851-30749913)
chr1 (383-445)||(30771302-30771364)
chr1 (360-426)||(31015031-31015097)
chr1 (364-445)||(10577721-10577802)
chr1 (386-439)||(14332634-14332687)
chr1 (386-431)||(25272496-25272541)
[»] chr3 (41 HSPs)
chr3 (361-445)||(28917990-28918076)
chr3 (360-445)||(10954940-10955025)
chr3 (360-445)||(55401063-55401148)
chr3 (360-441)||(20503453-20503534)
chr3 (360-435)||(8587017-8587092)
chr3 (388-445)||(3865690-3865747)
chr3 (360-441)||(26492195-26492276)
chr3 (389-435)||(8593154-8593200)
chr3 (360-428)||(4987294-4987362)
chr3 (360-436)||(10268481-10268557)
chr3 (360-432)||(21479106-21479178)
chr3 (361-428)||(26508099-26508166)
chr3 (360-442)||(10335275-10335357)
chr3 (386-436)||(51206348-51206398)
chr3 (386-431)||(1509553-1509598)
chr3 (360-437)||(16000010-16000087)
chr3 (386-427)||(21256990-21257031)
chr3 (386-437)||(25775522-25775574)
chr3 (391-431)||(27505265-27505305)
chr3 (386-437)||(7928464-7928515)
chr3 (364-431)||(34910309-34910376)
chr3 (360-431)||(39756224-39756295)
chr3 (390-441)||(40993325-40993376)
chr3 (391-445)||(7171520-7171574)
chr3 (363-437)||(8383248-8383322)
chr3 (386-431)||(49651786-49651831)
chr3 (360-431)||(14747549-14747621)
chr3 (363-431)||(15796294-15796362)
chr3 (363-431)||(34185123-34185191)
chr3 (386-441)||(8789540-8789595)
chr3 (364-431)||(14209105-14209172)
chr3 (360-431)||(14829678-14829748)
chr3 (364-431)||(28812507-28812574)
chr3 (386-441)||(45451567-45451622)
chr3 (360-442)||(10318024-10318105)
chr3 (385-443)||(14338471-14338529)
chr3 (391-437)||(35994733-35994778)
chr3 (392-445)||(2941578-2941631)
chr3 (386-431)||(25948887-25948932)
chr3 (392-445)||(35222958-35223011)
chr3 (360-405)||(40052320-40052365)
[»] chr6 (47 HSPs)
chr6 (363-445)||(34595125-34595207)
chr6 (360-445)||(17841575-17841660)
chr6 (360-445)||(28152087-28152171)
chr6 (363-441)||(4877933-4878012)
chr6 (360-437)||(426508-426585)
chr6 (362-445)||(853845-853928)
chr6 (361-436)||(7977825-7977900)
chr6 (360-431)||(16766685-16766756)
chr6 (386-445)||(28715309-28715368)
chr6 (358-445)||(33001275-33001362)
chr6 (360-442)||(8776962-8777044)
chr6 (364-441)||(32978889-32978967)
chr6 (390-445)||(24645499-24645554)
chr6 (360-442)||(16833296-16833378)
chr6 (386-438)||(6898274-6898326)
chr6 (360-436)||(7938104-7938180)
chr6 (386-437)||(403858-403909)
chr6 (360-431)||(9107370-9107441)
chr6 (360-431)||(10770674-10770745)
chr6 (360-431)||(12696312-12696383)
chr6 (360-432)||(7801155-7801227)
chr6 (361-441)||(19040341-19040421)
chr6 (360-431)||(8365519-8365590)
chr6 (360-426)||(31959147-31959213)
chr6 (368-445)||(1191686-1191763)
chr6 (364-432)||(3209373-3209442)
chr6 (360-441)||(5626686-5626767)
chr6 (386-431)||(31384934-31384979)
chr6 (360-436)||(7265588-7265664)
chr6 (360-440)||(12868671-12868746)
chr6 (390-438)||(26402673-26402721)
chr6 (386-433)||(6327516-6327563)
chr6 (390-429)||(9522909-9522948)
chr6 (386-437)||(34172207-34172258)
chr6 (390-436)||(1700370-1700416)
chr6 (386-440)||(7377993-7378047)
chr6 (393-431)||(9911528-9911566)
chr6 (400-442)||(16388206-16388248)
chr6 (363-438)||(27904029-27904106)
chr6 (360-425)||(1681746-1681811)
chr6 (386-423)||(4118341-4118378)
chr6 (360-437)||(5732504-5732581)
chr6 (386-431)||(5970108-5970153)
chr6 (386-431)||(7151426-7151471)
chr6 (386-431)||(7930319-7930364)
chr6 (390-431)||(7973672-7973713)
chr6 (360-445)||(9658867-9658952)
[»] scaffold0053 (1 HSPs)
scaffold0053 (360-445)||(8786-8871)
[»] chr7 (34 HSPs)
chr7 (360-445)||(15680797-15680882)
chr7 (360-437)||(11061070-11061147)
chr7 (363-438)||(25481893-25481968)
chr7 (363-431)||(24339633-24339701)
chr7 (386-431)||(3991338-3991383)
chr7 (386-431)||(9778514-9778559)
chr7 (390-445)||(21864826-21864881)
chr7 (386-441)||(21880166-21880221)
chr7 (386-431)||(9408334-9408379)
chr7 (386-437)||(3721107-3721158)
chr7 (360-431)||(5409836-5409907)
chr7 (386-441)||(8234160-8234215)
chr7 (360-431)||(22602710-22602781)
chr7 (360-439)||(26733292-26733371)
chr7 (363-441)||(7197287-7197365)
chr7 (360-430)||(7438694-7438764)
chr7 (390-431)||(2334268-2334309)
chr7 (390-431)||(18039017-18039058)
chr7 (390-439)||(19213821-19213870)
chr7 (390-431)||(21560521-21560562)
chr7 (360-445)||(24105666-24105751)
chr7 (386-427)||(26033465-26033506)
chr7 (383-439)||(18213025-18213081)
chr7 (360-431)||(13770679-13770750)
chr7 (360-431)||(18215186-18215257)
chr7 (360-431)||(27945029-27945100)
chr7 (365-436)||(28155563-28155634)
chr7 (386-441)||(33994226-33994281)
chr7 (360-431)||(43027469-43027540)
chr7 (384-430)||(48438558-48438604)
chr7 (392-445)||(598228-598281)
chr7 (360-441)||(9482922-9483003)
chr7 (360-441)||(20549779-20549860)
chr7 (390-431)||(32094020-32094061)
[»] chr5 (31 HSPs)
chr5 (360-445)||(21191042-21191127)
chr5 (360-442)||(6247610-6247692)
chr5 (360-445)||(21576731-21576816)
chr5 (363-434)||(8420018-8420089)
chr5 (390-441)||(15884006-15884057)
chr5 (361-436)||(33178014-33178089)
chr5 (360-426)||(14674257-14674323)
chr5 (360-445)||(31084311-31084401)
chr5 (364-445)||(42893352-42893433)
chr5 (360-431)||(39698529-39698600)
chr5 (386-445)||(43564895-43564954)
chr5 (363-432)||(15382468-15382539)
chr5 (360-440)||(24906292-24906372)
chr5 (360-431)||(19579689-19579760)
chr5 (360-431)||(21522738-21522809)
chr5 (360-431)||(21533304-21533375)
chr5 (386-441)||(28588664-28588719)
chr5 (390-431)||(12199948-12199989)
chr5 (386-431)||(13287399-13287444)
chr5 (360-436)||(6326292-6326368)
chr5 (386-445)||(27932249-27932308)
chr5 (386-441)||(30502378-30502433)
chr5 (386-441)||(30542721-30542776)
chr5 (360-431)||(37328844-37328915)
chr5 (360-430)||(21351906-21351976)
chr5 (361-431)||(41633724-41633794)
chr5 (361-423)||(4105246-4105310)
chr5 (386-431)||(7677719-7677764)
chr5 (360-409)||(19552565-19552614)
chr5 (399-436)||(19820391-19820428)
chr5 (364-445)||(30099024-30099105)
[»] scaffold0652 (1 HSPs)
scaffold0652 (360-445)||(448-533)
[»] chr2 (32 HSPs)
chr2 (360-445)||(6940243-6940328)
chr2 (360-445)||(15972861-15972946)
chr2 (360-441)||(18841003-18841084)
chr2 (360-445)||(20242713-20242798)
chr2 (360-441)||(30404840-30404921)
chr2 (360-445)||(37558965-37559050)
chr2 (360-445)||(38117145-38117230)
chr2 (390-441)||(2438709-2438760)
chr2 (360-431)||(37419731-37419802)
chr2 (390-445)||(5040752-5040807)
chr2 (390-437)||(19536391-19536438)
chr2 (360-431)||(20539674-20539745)
chr2 (364-430)||(11223864-11223930)
chr2 (361-431)||(12668423-12668493)
chr2 (360-437)||(21624254-21624332)
chr2 (390-445)||(28596487-28596542)
chr2 (360-431)||(30717530-30717601)
chr2 (363-445)||(12224212-12224296)
chr2 (393-441)||(5367213-5367261)
chr2 (360-436)||(18421951-18422027)
chr2 (360-424)||(21374706-21374770)
chr2 (385-445)||(43585991-43586051)
chr2 (360-430)||(14996224-14996295)
chr2 (390-437)||(18255974-18256021)
chr2 (360-431)||(34784982-34785053)
chr2 (386-431)||(974761-974806)
chr2 (386-431)||(15657878-15657923)
chr2 (360-437)||(20473310-20473387)
chr2 (390-431)||(23058442-23058483)
chr2 (386-431)||(30335431-30335476)
chr2 (390-431)||(33153442-33153483)
chr2 (390-431)||(38442325-38442366)
[»] scaffold0722 (1 HSPs)
scaffold0722 (360-443)||(7020-7103)
[»] scaffold0050 (1 HSPs)
scaffold0050 (386-445)||(70292-70351)
[»] scaffold0103 (1 HSPs)
scaffold0103 (360-445)||(51799-51887)
[»] scaffold0223 (1 HSPs)
scaffold0223 (363-431)||(20163-20231)
[»] scaffold0361 (1 HSPs)
scaffold0361 (364-445)||(14522-14600)
[»] scaffold0083 (1 HSPs)
scaffold0083 (398-445)||(45516-45563)
[»] scaffold0027 (1 HSPs)
scaffold0027 (363-431)||(46673-46741)
[»] scaffold0011 (1 HSPs)
scaffold0011 (386-430)||(17750-17794)
[»] scaffold0697 (1 HSPs)
scaffold0697 (386-441)||(1658-1713)
[»] scaffold0003 (1 HSPs)
scaffold0003 (360-431)||(241582-241653)
[»] scaffold0512 (1 HSPs)
scaffold0512 (411-445)||(5022-5056)
[»] scaffold0021 (1 HSPs)
scaffold0021 (386-428)||(130496-130538)
[»] scaffold0025 (1 HSPs)
scaffold0025 (390-431)||(23788-23829)
[»] scaffold0306 (1 HSPs)
scaffold0306 (360-432)||(13388-13460)
[»] scaffold0152 (1 HSPs)
scaffold0152 (360-432)||(21867-21939)
[»] scaffold0122 (1 HSPs)
scaffold0122 (364-440)||(8002-8077)
[»] scaffold0450 (1 HSPs)
scaffold0450 (360-431)||(8635-8706)
[»] scaffold0018 (1 HSPs)
scaffold0018 (360-430)||(178819-178890)
[»] scaffold0475 (1 HSPs)
scaffold0475 (402-444)||(3338-3380)
[»] scaffold0171 (1 HSPs)
scaffold0171 (390-431)||(23438-23479)
[»] scaffold0136 (1 HSPs)
scaffold0136 (390-431)||(3849-3890)


Alignment Details
Target: chr4 (Bit Score: 302; Significance: 1e-169; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 8 - 361
Target Start/End: Complemental strand, 6880393 - 6880034
Alignment:
Q  8 cattctagtcttaattctcctgaattctgatgaaaattctacatctaattccagataatgagactttttcaagaacaacttattgcttagccagaggatg 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6880393 cattctaatcttaattctcctgaattctgatgaaaattctacatctaattccagataatgaaactttttcaagaacaacttattgcttagccagaggatg 6880294  T
Q  108 caagaatcctttgttgaataagagcatgcctcattgcattagctctctaakggtgt--tattgtagaatgaagttataatccttgaaagtattcatccac 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||| | |||||||||||||||||||||    
T  6880293 caagaatcctttgttgaataagagcatgcctcattgcattagctctctaatggtgtgttattgtagaatgaagttaaattccttgaaagtattcatccac 6880194  T
Q  206 tttctttgtctatattgagttcattccggtcgaataggactatactggttcatgaaaaccgtaaatgcacttatgtacaaatgattgtctcaagttccaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6880193 tttctttgtctatattgagttcattccggtcgaataggactatactggtccatgaaaaccgtaaatgcacttatgtacaaatgattatctcaagttccaa 6880094  T
Q  306 atcatgagtagcataattccttttggat----gttttcagttgtcacgatgaataagtca 361  Q
    |||||||| |||||||||||||||||||    ||||||||||||||||||||||||||||    
T  6880093 atcatgagcagcataattccttttggatgtttgttttcagttgtcacgatgaataagtca 6880034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 447 - 888
Target Start/End: Complemental strand, 6879405 - 6878972
Alignment:
Q  447 catcaatcttgtcaaataaaatacatttagctccaaccaactctactagccaaaatcaaccaaaaggcacacagtagcaacaatttagacacaactagaa 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||       
T  6879405 catcaatcttgtcaaataaaatacatttagctccaaccaactctactagccaaaatcaaacaaaaggcacacagtagcaacaatttagacacaacta--- 6879309  T
Q  547 aactacaaagcatagacacaaatatagtaagttgccaaaggtgacaaaaa------------gctaaaacagaacatcctcctttattaatcaaaaggaa 634  Q
      || ||||||||||||||||||||||||||||||||| |||||||||||            ||||||||||||||||||||||||||||||||||||||    
T  6879308 --ctgcaaagcatagacacaaatatagtaagttgccaagggtgacaaaaaactatacaaaaagctaaaacagaacatcctcctttattaatcaaaaggaa 6879211  T
Q  635 caacaattaagccccaaaagaccatataaatcaaagatttagattaatattatgatcattatgca-ttatcttgaaattacttgcaaaaacctcaaatat 733  Q
    |||||||||||         |||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6879210 caacaattaag---------accatacaaatcaaagatttagattaatattgtgatcattatgcaattatcttgaaattacttgcaaaaacctcaaatat 6879120  T
Q  734 tgttattaactgtaatttcaagattgctacatcaactaccttaatatatatattggcttcaactaatcaatcaccactgcaacaatcacaggcccaatca 833  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| |||||||| |||||||||||| ||| |||||||||    
T  6879119 tgttattaactgtaatttcaagattgctacatcaactagcttaatagatatatt-gcttcaact-atcaatca-cactgcaacaat-aca-gcccaatca 6879025  T
Q  834 ttataaacttaaccaccataaattaattttttgaaaccttgcaattactcctaat 888  Q
    | |||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  6879024 tcataaacttaa-caacataaattaa-tttttgaaaccttgcaattactcctaat 6878972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 6879536 - 6879459
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  6879536 cactgacacgccgacatagcaaaatttttggaaaaatcacataattaagtgtaattacaagtgtcggtgtcggacacg 6879459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 23293054 - 23292972
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||||||||||| ||| |||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23293054 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgt 23292972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 49431016 - 49431099
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaa-aatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||||||||||| ||| |||  |||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  49431016 tgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtcggacacgacacgtgt 49431099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 54580068 - 54580009
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  54580068 tttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgt 54580009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 441
Target Start/End: Original strand, 21945491 - 21945572
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||| ||||||| ||| |||  ||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||    
T  21945491 cactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacac 21945572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 372 - 441
Target Start/End: Complemental strand, 28964307 - 28964238
Alignment:
Q  372 gacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||| |||  |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  28964307 gacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcggacacgacac 28964238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 29205458 - 29205513
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||    
T  29205458 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttggacacgacac 29205513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 2362043 - 2361961
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||| |||||| ||| |||  ||||||||||| |||||||| ||| |||||| |||||||||||||||||||||| |||||    
T  2362043 tgacacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcggacacgactcgtgt 2361961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 391 - 438
Target Start/End: Complemental strand, 12797378 - 12797331
Alignment:
Q  391 aaaaatcacataattaagtataattacaagtgtcggtgtcggacacga 438  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  12797378 aaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 12797331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 16303337 - 16303266
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||  ||| |||||||||||| | |||||| ||| |||||||||||||||||||||    
T  16303337 cactgacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaattacaagtgtcggtgtcg 16303266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 42640547 - 42640594
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  42640547 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 42640594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 441
Target Start/End: Original strand, 4157168 - 4157218
Alignment:
Q  391 aaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  4157168 aaaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacac 4157218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 441
Target Start/End: Original strand, 4157455 - 4157505
Alignment:
Q  391 aaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||||||    
T  4157455 aaaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacac 4157505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 386 - 440
Target Start/End: Complemental strand, 12895319 - 12895265
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgaca 440  Q
    ||||||||||||||||||||  || |||||| |||||||||||||||||||||||    
T  12895319 tttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcggacacgaca 12895265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 445
Target Start/End: Complemental strand, 34306844 - 34306790
Alignment:
Q  391 aaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||| |||||  ||| |||||||||||||||||||||||||||||||||||    
T  34306844 aaaaatcagataatgtagtgtaattacaagtgtcggtgtcggacacgacacgtgt 34306790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 35158056 - 35157975
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||  | | |||  |||| ||||||||||||||| ||| |||||| ||||||||||||| ||||||||||    
T  35158056 cactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtctgacacgacac 35157975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 38847079 - 38846998
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||| |||||| ||| |||  ||||||||||||| || ||| ||| |||||||||||||| |||||||| |||||||||||    
T  38847079 gacactccgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtcagtgtcggatacgacacgtgt 38846998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 30298934 - 30299006
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaa-tcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||  |||||||||| | |||||||| ||| |||||||||||||||||||||    
T  30298934 cactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30299006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 30327802 - 30327874
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaa-tcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||  |||||||||| | |||||||| ||| |||||||||||||||||||||    
T  30327802 cactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcg 30327874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 386 - 429
Target Start/End: Complemental strand, 6485656 - 6485613
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgt 429  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  6485656 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 11596423 - 11596352
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||| ||||| ||| ||| |||  |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  11596423 cactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcg 11596352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 391 - 438
Target Start/End: Original strand, 16073413 - 16073460
Alignment:
Q  391 aaaaatcacataattaagtataattacaagtgtcggtgtcggacacga 438  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  16073413 aaaaatcgcataattcagtgtaattacaagtgtcggtgtcggacacga 16073460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 40179681 - 40179626
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||||||| ||| |||||| | | ||||||||||||||||||||    
T  40179681 tttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcggacacgacac 40179626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 386 - 440
Target Start/End: Complemental strand, 8423763 - 8423709
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgaca 440  Q
    ||||| |||||||||||||| ||| |||||| || ||||||||||||||||||||    
T  8423763 tttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggacacgaca 8423709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 13307890 - 13307950
Alignment:
Q  385 ttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||| ||||| |||||||| | | |||| |||||||| |||||||||||||||||||||    
T  13307890 ttttgagaaaatgacataattcaatgtaatcacaagtgttggtgtcggacacgacacgtgt 13307950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 431
Target Start/End: Complemental strand, 3947833 - 3947766
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||| ||||||| ||| |||  |||||||||||| ||||||| ||| |||||||||||||| ||||||    
T  3947833 gacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcg 3947766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 431
Target Start/End: Complemental strand, 12895183 - 12895116
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||| | ||| |||  |||||||||||||||||||| |   |||||||||||||||||||||    
T  12895183 gacacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcg 12895116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 19482656 - 19482727
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| | | |||  |||||||| |||||||||||  || ||||||||||||| |||||||    
T  19482656 cactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcg 19482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 445
Target Start/End: Complemental strand, 36509133 - 36509078
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||||||||||||| |||| |||||| | ||||||| ||||||| ||||||||||    
T  36509133 aaaaaatcacataatcaagtgtaattatatgtgtcggcgtcggacgcgacacgtgt 36509078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 364 - 431
Target Start/End: Original strand, 50280873 - 50280942
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaa--gtataattacaagtgtcggtgtcg 431  Q
    |||||||||||| ||| |||  ||||||||| ||||||||||||  || |||||||||||| ||||||||    
T  50280873 gacacgccgacacagctaataatttgaaaaattcacataattaagtgtgtaattacaagtgccggtgtcg 50280942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 35161056 - 35161109
Alignment:
Q  392 aaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||| ||| |||||| |||| || | ||||||||||||||||||    
T  35161056 aaaatcacataattcagtgtaattataagtatcagagtcggacacgacacgtgt 35161109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 6e-24; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 20873057 - 20873142
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||||||  |||  |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  20873057 cactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgatacgtgt 20873142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 22651964 - 22652035
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||  |||||||||||||||||||| | |||||||||||||||||||||||    
T  22651964 cactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcg 22652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 364 - 445
Target Start/End: Original strand, 5813584 - 5813665
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||| ||| |||  ||||||||| ||||||| || ||| ||| |||||||||||||||||||||||||||||||    
T  5813584 gacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcggacacgacacgtgt 5813665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 22595982 - 22596067
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| ||| |||  ||| ||||||| |||||||| ||| ||||||||||||| |||||||||| ||||||||||    
T  22595982 cactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgtcggacgcgacacgtgt 22596067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 24613509 - 24613585
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    ||||||||| |||||| ||| |||  |||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  24613509 cactgacacaccgacacagctaataatttgaaaa-atcacataattaagtgtaattacaagtgtcggtgtcggacacg 24613585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 429
Target Start/End: Complemental strand, 29510375 - 29510306
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgt 429  Q
    |||||||||||||||| ||| |||  ||||||||||||||| |||| |||||||||||||||||||||||    
T  29510375 cactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgt 29510306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 36450825 - 36450740
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| | | |||  ||||||||||||||| |||| ||| ||||||||||||| ||||||||||||||| |||||    
T  36450825 cactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacacgacgcgtgt 36450740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 386 - 438
Target Start/End: Original strand, 4948666 - 4948718
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacga 438  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  4948666 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacga 4948718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 40332205 - 40332264
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||| |||||||||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  40332205 tttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgtgt 40332264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 370 - 431
Target Start/End: Original strand, 8342970 - 8343031
Alignment:
Q  370 ccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||| |||  |||||||||||||||||||| ||| |||||||||||||||||||||    
T  8342970 ccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 8343031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 437
Target Start/End: Original strand, 8343308 - 8343381
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    ||||| |||||||||| |||  |||||||||||||||||||| ||| |||||||||||||| |||||| |||||    
T  8343308 gacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacg 8343381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 15816200 - 15816129
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| | | |||  |||||||||||||||||||| ||| |||||| ||||||||||||||    
T  15816200 cactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcg 15816129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 358 - 441
Target Start/End: Original strand, 31556983 - 31557065
Alignment:
Q  358 gtcactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||||| ||  |||  |||||||| ||||||||||| ||| ||||||||||| |||||||| ||||||||||    
T  31556983 gtcactgacacgccgacacagttaataatttgaaaa-atcacataattcagtgtaattacaagtttcggtgtcagacacgacac 31557065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 386 - 431
Target Start/End: Complemental strand, 2572101 - 2572056
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  2572101 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 2572056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 25566855 - 25566900
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  25566855 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 25566900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 428
Target Start/End: Complemental strand, 25192418 - 25192350
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtg 428  Q
    |||||||||||||||| ||| |||  ||||||||| | |||||||| |||||||||| |||||||||||    
T  25192418 cactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcggtg 25192350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 3025565 - 3025624
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||| |||||||||||||| ||| |||||| | ||||| ||||||||||||||||||||    
T  3025565 tttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacacgacacgtgt 3025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 13437035 - 13436964
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||  |||||||||||||||||||| |   |||| ||||||||||||||||    
T  13437035 cactgacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcg 13436964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 390 - 441
Target Start/End: Original strand, 18407737 - 18407788
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||| ||| ||||||||||||||| || ||||||||||||    
T  18407737 aaaaaatcacataattcagtgtaattacaagtgtcgctgccggacacgacac 18407788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 30271362 - 30271291
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||  |||||||||||||||||||  ||| |||||||||||| | ||||||    
T  30271362 cactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtgccagtgtcg 30271291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 365 - 430
Target Start/End: Complemental strand, 4298952 - 4298887
Alignment:
Q  365 acacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtc 430  Q
    ||||||||||| ||  |||  |||||||||||||||||||| | | ||||||||||||||||||||    
T  4298952 acacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 364 - 436
Target Start/End: Complemental strand, 13844663 - 13844591
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacac 436  Q
    ||||||||||||  || |||  ||||| |||||||||||||| ||| |||||| | |||||||||||||||||    
T  13844663 gacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 26434194 - 26434253
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||| |||||||||||||| | |||||||| |||||||||||| |||||| | ||||||    
T  26434194 tttgagaaaatcacataattcaatataattaaaagtgtcggtgttggacacaatacgtgt 26434253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 433
Target Start/End: Complemental strand, 30077432 - 30077385
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcgga 433  Q
    |||||||| ||||||||||| ||| |||||||||||||| ||||||||    
T  30077432 tttgaaaacatcacataattcagtgtaattacaagtgtccgtgtcgga 30077385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 33405429 - 33405374
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||| |||| ||||||||| ||| |||||| | ||||||||||||||||||||||    
T  33405429 tttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcggacacgacac 33405374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 22197813 - 22197743
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtc 430  Q
    |||| ||||||| ||| ||| |||  ||||||||| |||||||||| ||| |||||||||||||| |||||    
T  22197813 cactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtcagtgtc 22197743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 445
Target Start/End: Complemental strand, 4786377 - 4786324
Alignment:
Q  392 aaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||| ||| |||||| | |||||||||||||| |||||| ||||    
T  4786377 aaaatcacataattcagtgtaattatatgtgtcggtgtcggatacgacatgtgt 4786324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 445
Target Start/End: Complemental strand, 15023288 - 15023243
Alignment:
Q  400 ataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||| ||| ||||||||||||||| ||||||| |||||||||||    
T  15023288 ataattcagtgtaattacaagtgtcgatgtcggatacgacacgtgt 15023243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 435
Target Start/End: Complemental strand, 18170527 - 18170478
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggaca 435  Q
    ||||||||||| |||||||| | | ||||||||| |||||||||||||||    
T  18170527 tttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcggaca 18170478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 435
Target Start/End: Complemental strand, 18634095 - 18634046
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggaca 435  Q
    ||||||||||| |||||||| | | ||||||||| |||||||||||||||    
T  18634095 tttgaaaaaattacataattcaatgtaattacaaatgtcggtgtcggaca 18634046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 6e-24; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 46348454 - 46348369
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| ||| |||  ||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||    
T  46348454 cactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgt 46348369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 22881687 - 22881606
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||| | | |||  |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  22881687 cactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacac 22881606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 364 - 441
Target Start/End: Complemental strand, 22515954 - 22515877
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||||| |||| ||| |||  |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  22515954 gacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacac 22515877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 38078732 - 38078651
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||| ||||| ||| |||  |||||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  38078732 cactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacac 38078651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 18337343 - 18337402
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||    
T  18337343 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgt 18337402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 441
Target Start/End: Original strand, 1815245 - 1815326
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||| |   |||| ||| |||||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  1815245 cactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtccgacacgacac 1815326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 37598820 - 37598904
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| | | |||  ||||||||||||||| |||| ||| |||||| ||||||||||||||||||||||||||||    
T  37598820 cactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcggacacgacacgtgt 37598904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 390 - 443
Target Start/End: Original strand, 51410043 - 51410096
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgt 443  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  51410043 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgt 51410096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 40258978 - 40258923
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  40258978 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcagacacgacac 40258923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 362 - 431
Target Start/End: Original strand, 113289 - 113358
Alignment:
Q  362 ctgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||| ||| |||  |||||||||||||||||||| ||| ||||||||||||| |||||||    
T  113289 ctgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcg 113358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 31672966 - 31672889
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    ||||||||| |||||| ||| |||  |||||||||||||| ||||| ||| ||||||||||| |||||||||||||||    
T  31672966 cactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtcggacacg 31672889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 360 - 436
Target Start/End: Original strand, 9103628 - 9103703
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacac 436  Q
    |||||||||||||||| ||  |||  |||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  9103628 cactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaa-tacaagtgtcggtgtcggacac 9103703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 42359520 - 42359445
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggaca 435  Q
    ||||||||||| |||| | | |||  ||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  42359520 cactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggaca 42359445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 431
Target Start/End: Complemental strand, 1486779 - 1486709
Alignment:
Q  361 actgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||| |||| ||| |||  |||||||||||||||||||| ||| |||||| ||||||||||||||    
T  1486779 actgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 1486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 437
Target Start/End: Complemental strand, 19058924 - 19058850
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    ||||||||||||| ||| |||  ||| |||| || |||||||| ||| |||||||||||||||||||||||||||    
T  19058924 tgacacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcggacacg 19058850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 31694783 - 31694710
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaa--tcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||| ||| ||||||||| |||  ||||||||||  |||||||||| |||||||||||||||||||||||||    
T  31694783 cactgatacgtcgacatagctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcg 31694710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 360 - 438
Target Start/End: Complemental strand, 35702659 - 35702581
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacga 438  Q
    |||||||| ||||||| ||| |||  ||||||||  ||| |||||||||| |||||||||||||| |||||||||||||    
T  35702659 cactgacatgccgacacagctaataatttgaaaacttcaaataattaagtgtaattacaagtgtcagtgtcggacacga 35702581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 386 - 431
Target Start/End: Complemental strand, 24577231 - 24577186
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  24577231 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 18190153 - 18190094
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||||||||| |||||||| ||| ||||||||||||||| |||| ||||| ||||||||    
T  18190153 tttgaaaaaattacataattcagtgtaattacaagtgtcgatgtcagacacaacacgtgt 18190094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 21530703 - 21530758
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||| ||||||| ||||||  ||||||||| ||||||||||||||||||||||||    
T  21530703 tttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacgacac 21530758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 361 - 431
Target Start/End: Original strand, 40917740 - 40917808
Alignment:
Q  361 actgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||||||| ||| |||  ||||||||||||||  |||||||| ||||||||||| |||||||||    
T  40917740 actgacacgccgacacagctaataatttgaaaaaatcac--aattaagtgtaattacaagtctcggtgtcg 40917808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 41877515 - 41877464
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    ||||| ||||| |||||||| ||| |||||||||||||||||||||||||||    
T  41877515 tttgagaaaattacataatttagtgtaattacaagtgtcggtgtcggacacg 41877464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 6415072 - 6415002
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtc 430  Q
    ||||||||||||||||| || |||| ||||| |||||||||||||  ||| |||||| | |||||||||||    
T  6415072 cactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaattagatgtgtcggtgtc 6415002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 13011287 - 13011205
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaa-tcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||| ||||||| ||| |||  |||||||||| |||||||||||||| ||||||||||||| ||| | |||||| ||||    
T  13011287 cactgacatgccgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgttggttttggacacaacac 13011205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 36878449 - 36878527
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacga 438  Q
    ||||||||||||||||  || |||  ||||| |||||||||||||| ||| |||||| | ||||||||||| |||||||    
T  36878449 cactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtctgacacga 36878527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 426
Target Start/End: Complemental strand, 48450658 - 48450592
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcgg 426  Q
    |||||||||||| ||| ||| |||  ||||||||||| |||||||| ||| ||||||||||||||||    
T  48450658 cactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcgg 48450592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 431
Target Start/End: Complemental strand, 1705037 - 1704992
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||    
T  1705037 tttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcg 1704992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 5898309 - 5898252
Alignment:
Q  388 tgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||||| ||| |||||| | | ||||||||| ||||||||||||||    
T  5898309 tgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcagacacgacacgtgt 5898252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 431
Target Start/End: Complemental strand, 6612216 - 6612171
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||    
T  6612216 tttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcg 6612171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 441
Target Start/End: Original strand, 13997871 - 13997952
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||||||||||||||  |  |||| ||| |||||||||||||||| ||| |||||| | |||||||||| ||| |||||||    
T  13997871 cactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgttggagacgacac 13997952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 427
Target Start/End: Original strand, 18471318 - 18471355
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggt 427  Q
    |||||||||||||||| |||||||||||||||||||||    
T  18471318 aaaaaatcacataattcagtataattacaagtgtcggt 18471355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 47989515 - 47989556
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||||||||||||||||||||    
T  47989515 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 47989556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 28273133 - 28273089
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtc 430  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||||    
T  28273133 tttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtc 28273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 392 - 444
Target Start/End: Complemental strand, 29163420 - 29163368
Alignment:
Q  392 aaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtg 444  Q
    |||||||||||||| | | |||||| | |||||||||||||||||||||||||    
T  29163420 aaaatcacataattcaatttaattatatgtgtcggtgtcggacacgacacgtg 29163368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 18556527 - 18556456
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||  |||||||| ||||||||||| | | ||||||||||| | |||||||    
T  18556527 cactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcg 18556456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 21620973 - 21621020
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    |||||||||||||||| ||| || ||||||| ||||||||||||||||    
T  21620973 aaaaaatcacataattcagtgtatttacaagcgtcggtgtcggacacg 21621020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 442
Target Start/End: Complemental strand, 24334737 - 24334694
Alignment:
Q  399 cataattaagtataattacaagtgtcggtgtcggacacgacacg 442  Q
    ||||||| ||| ||||||||||||||||||||||||||| ||||    
T  24334737 cataattcagtgtaattacaagtgtcggtgtcggacacgtcacg 24334694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 40181885 - 40181944
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||| |||||||||||||| ||| |||||| | || |||||||||||||| ||||||||    
T  40181885 tttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacacaacacgtgt 40181944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 386 - 440
Target Start/End: Complemental strand, 5927385 - 5927331
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgaca 440  Q
    ||||||||||||| |||||| | | |||||||||||||| |||||||||| ||||    
T  5927385 tttgaaaaaatcatataatttaatgtaattacaagtgtcagtgtcggacatgaca 5927331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 5944269 - 5944342
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaa--aatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||||| || ||| |||  ||||||||  |||||||||||| ||| |||||| ||||||||||||||    
T  5944269 cactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcg 5944342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 387 - 429
Target Start/End: Original strand, 21378593 - 21378635
Alignment:
Q  387 ttgaaaaaatcacataattaagtataattacaagtgtcggtgt 429  Q
    |||||||||| |||||||| ||| |||||||||||||||||||    
T  21378593 ttgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 30749851 - 30749913
Alignment:
Q  383 ttttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||| | |||||||||||||| ||| |||||| | ||||||||||||||||| ||| ||||    
T  30749851 tttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgt 30749913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 30771302 - 30771364
Alignment:
Q  383 ttttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||| | |||||||||||||| ||| |||||| | ||||||||||||||||| ||| ||||    
T  30771302 tttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaccacatgtgt 30771364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 31015031 - 31015097
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcgg 426  Q
    ||||||| |||| ||| ||| |||  ||||| |||||||||||||| ||| ||||||||||||||||    
T  31015031 cactgacgcgcctacacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcgg 31015097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 10577802 - 10577721
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||| ||| |||||||| | ||||||||| |||  ||| |||||| | ||||||| | |||||||||| |||||    
T  10577802 gacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtgtcgggggcggacacgacgcgtgt 10577721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 14332687 - 14332634
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgac 439  Q
    ||||| |||||||||||||| ||| |||||| | || |||||||||||||||||    
T  14332687 tttgagaaaatcacataatttagtgtaattatatgtctcggtgtcggacacgac 14332634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 25272496 - 25272541
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||| |||||||||||||| ||| |||||| ||||||||||||||    
T  25272496 tttgagaaaatcacataatttagtgtaattataagtgtcggtgtcg 25272541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 9e-23; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 28917990 - 28918076
Alignment:
Q  361 actgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtc--ggacacgacacgtgt 445  Q
    ||||||||||||||||||| |||  |||||||||||||||||||| ||| ||||||||||||||||||||  |||||||||||||||    
T  28917990 actgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgt 28918076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 10954940 - 10955025
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| | | |||  |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  10954940 cactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgt 10955025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 55401063 - 55401148
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||| ||||||||| | | |||  |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  55401063 cactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgt 55401148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 360 - 441
Target Start/End: Original strand, 20503453 - 20503534
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||| | |||||  ||||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||    
T  20503453 cactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggacacgacac 20503534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 8587092 - 8587017
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggaca 435  Q
    |||||||||||||||| | | | |  |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8587092 cactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtcggaca 8587017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 3865690 - 3865747
Alignment:
Q  388 tgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  3865690 tgaaaaactcacataattcagtataattacaagtgtcggtgtctgacacgacacgtgt 3865747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 26492276 - 26492195
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||| ||| |||  ||||||||||||| | |||| ||| ||||||||||| |||||||||||||||||||    
T  26492276 cactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtcggacacgacac 26492195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 389 - 435
Target Start/End: Original strand, 8593154 - 8593200
Alignment:
Q  389 gaaaaaatcacataattaagtataattacaagtgtcggtgtcggaca 435  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  8593154 gaaaaaatcacataattcagtataattacaagtgtcggtgtcggaca 8593200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 360 - 428
Target Start/End: Complemental strand, 4987362 - 4987294
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtg 428  Q
    |||||||||||||||| ||| |||  |||||||||||||||||||| ||| ||||||||||||| ||||    
T  4987362 cactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtg 4987294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 360 - 436
Target Start/End: Complemental strand, 10268557 - 10268481
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacac 436  Q
    |||||||||||||||| ||  |||  |||||||||||||||||||| ||| |||||||||||||| ||||| |||||    
T  10268557 cactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcagacac 10268481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 360 - 432
Target Start/End: Original strand, 21479106 - 21479178
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcgg 432  Q
    |||||||||||||||| ||| |||  ||||||||||||||| |||| ||| ||||||| ||||||||||||||    
T  21479106 cactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtcgg 21479178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 361 - 428
Target Start/End: Original strand, 26508099 - 26508166
Alignment:
Q  361 actgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtg 428  Q
    |||||||||| |||| ||| |||  |||||||||||||||||||| ||| ||||||||||||||||||    
T  26508099 actgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 26508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 360 - 442
Target Start/End: Complemental strand, 10335357 - 10335275
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacg 442  Q
    |||||||||||||||| | | |||  ||||||||| ||||||| || ||| ||| |||||||||||||||||| |||||||||    
T  10335357 cactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcgggcacgacacg 10335275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 386 - 436
Target Start/End: Complemental strand, 51206398 - 51206348
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacac 436  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  51206398 tttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcggacac 51206348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 1509553 - 1509598
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  1509553 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 1509598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 16000087 - 16000010
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    |||||||||||||||| | | |||  ||| ||||||| |||||||| ||| ||| |||||||||||||||||||||||    
T  16000087 cactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtcggacacg 16000010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 386 - 427
Target Start/End: Complemental strand, 21257031 - 21256990
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggt 427  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  21257031 tttgaaaaaatcacataattcagtataattacaagtgtcggt 21256990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 25775522 - 25775574
Alignment:
Q  386 tttgaaaa-aatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    |||||||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  25775522 tttgaaaataatcacataattcagtgtaattacaagtgtcggtgtcggacacg 25775574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 431
Target Start/End: Original strand, 27505265 - 27505305
Alignment:
Q  391 aaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  27505265 aaaaatcacataattaagtgtaattacaagtgtcggtgtcg 27505305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 7928464 - 7928515
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    |||||||||||||||||||| ||| |||||| | ||||||||||||||||||    
T  7928464 tttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacg 7928515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 364 - 431
Target Start/End: Original strand, 34910309 - 34910376
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||| | | |||  |||||||||||||||||||| ||| |||||||||| ||||||||||    
T  34910309 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcg 34910376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 39756224 - 39756295
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| |   |||  ||| |||||||||||||||| | |||||||||||||||||||||||    
T  39756224 cactgacacgccgacaaaattaataatttaaaaaaatcacataatttaatataattacaagtgtcggtgtcg 39756295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 390 - 441
Target Start/End: Complemental strand, 40993376 - 40993325
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||| ||| |||||| | ||||||||||||||||||||||    
T  40993376 aaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacac 40993325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 7171520 - 7171574
Alignment:
Q  391 aaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||| ||||||  || ||||||||||||| |||||||||||||||||||||    
T  7171520 aaaaatcatataattcggtgtaattacaagtgttggtgtcggacacgacacgtgt 7171574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 363 - 437
Target Start/End: Original strand, 8383248 - 8383322
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    |||||||||||||  || |||  ||||| ||||||| |||||| ||| |||||| ||||||||||||||||||||    
T  8383248 tgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacacg 8383322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 431
Target Start/End: Complemental strand, 49651831 - 49651786
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| | | |||||||||||||||||||||    
T  49651831 tttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcg 49651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 14747549 - 14747621
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaa-aatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||  |||||||| |||||||||||| ||| |||||||||| ||| ||||||    
T  14747549 cactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaagggtccgtgtcg 14747621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 15796362 - 15796294
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||||| ||  |||  ||||||||||||| |||||| ||| ||||||||| |||||||||||    
T  15796362 tgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcg 15796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 363 - 431
Target Start/End: Complemental strand, 34185191 - 34185123
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||  || |||  ||| ||||||||||| |||| ||| |||||||||||||||||||||    
T  34185191 tgacacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcg 34185123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 8789595 - 8789540
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||| ||||||||||||||  || |||||| | ||||||||||||||||||||||    
T  8789595 tttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacacgacac 8789540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 431
Target Start/End: Original strand, 14209105 - 14209172
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||| | | |||  ||| |||||||||||||||| ||| |||||||||||||| ||||||    
T  14209105 gacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 14209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 14829678 - 14829748
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||  |||||||| ||||||||||| |   |||||||||||||||||||||    
T  14829678 cactgacacgccgacacagctaataatttgaaaa-atcacataattcatggtaattacaagtgtcggtgtcg 14829748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 364 - 431
Target Start/End: Original strand, 28812507 - 28812574
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||| | | |||  |||||| ||||||||||||| ||| || ||||||||||||||||||    
T  28812507 gacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcg 28812574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 45451567 - 45451622
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||| ||||||||||| || |||||||| | | ||||||||||||||||||||||    
T  45451567 tttgagaaaatcacatacttcagtataataatatgtgtcggtgtcggacacgacac 45451622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 360 - 442
Target Start/End: Complemental strand, 10318105 - 10318024
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacg 442  Q
    |||||||||||||||| ||| |||  ||||||||| ||||||  || ||| ||| || ||||||||||||||| |||||||||    
T  10318105 cactgacacgccgacacagctaataatttgaaaaagtcacat-ttttagtgtaaatataagtgtcggtgtcgggcacgacacg 10318024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 385 - 443
Target Start/End: Complemental strand, 14338529 - 14338471
Alignment:
Q  385 ttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgt 443  Q
    |||||||||||| |||||||| | | |||| |||| |||||||||| ||||||||||||    
T  14338529 ttttgaaaaaatgacataattcaatgtaatcacaaatgtcggtgtcagacacgacacgt 14338471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 391 - 437
Target Start/End: Complemental strand, 35994778 - 35994733
Alignment:
Q  391 aaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||||||    
T  35994778 aaaaatcacataattcagtgtaattacaagtgtc-gtgtcggacacg 35994733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 2941578 - 2941631
Alignment:
Q  392 aaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||||||| |||  ||| |||||| | ||||||||||||||||||||||||||    
T  2941578 aaaatcacaaaatacagtgtaattatatgtgtcggtgtcggacacgacacgtgt 2941631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 431
Target Start/End: Complemental strand, 25948932 - 25948887
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| ||| |||||| |||||| |||||||    
T  25948932 tttgaaaaaatcacataattcagtgtaattataagtgttggtgtcg 25948887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 35222958 - 35223011
Alignment:
Q  392 aaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||| | | |||||| | |||||||||||||||| |||||||||    
T  35222958 aaaatcacataattcaatgtaattatatgtgtcggtgtcggacatgacacgtgt 35223011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 40052320 - 40052365
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataatt 405  Q
    |||||||||||||||| ||| |||  ||||||||||||||||||||    
T  40052320 cactgacacgccgacacagctaataatttgaaaaaatcacataatt 40052365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 4e-22; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 34595125 - 34595207
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||||||||||| | | |||  |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  34595125 tgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgt 34595207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 17841660 - 17841575
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| ||| |||  |||||||||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||    
T  17841660 cactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcggacacgacatgtgt 17841575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 28152087 - 28152171
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| ||| |||  |||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  28152087 cactgacacgccgacaaagctaataatttgaaaa-atcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgt 28152171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 4877933 - 4878012
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaa-tcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||| |||||| ||| |||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  4877933 tgacacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgtcggacacgacac 4878012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 426585 - 426508
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    |||||||||||||||| ||  |||  |||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  426585 cactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcggacacg 426508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 362 - 445
Target Start/End: Complemental strand, 853928 - 853845
Alignment:
Q  362 ctgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||| | | |||  ||||||||||||||||||||||||  |||||||||||||||||||||| |||||| ||||    
T  853928 ctgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtcggatacgacatgtgt 853845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 361 - 436
Target Start/End: Complemental strand, 7977900 - 7977825
Alignment:
Q  361 actgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacac 436  Q
    ||||||||||||||| ||| |||  ||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  7977900 actgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcggacac 7977825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 16766685 - 16766756
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||  |||||||||||||||||||| ||| |||||||||||||||||||||    
T  16766685 cactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 16766756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 28715309 - 28715368
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  28715309 tttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgt 28715368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 358 - 445
Target Start/End: Complemental strand, 33001362 - 33001275
Alignment:
Q  358 gtcactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||| |||||||||||||  || |||  |||||||||||||||||||||| | |||||| | ||||||||||||||||||||||||||    
T  33001362 gtcaatgacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacacgacacgtgt 33001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 360 - 442
Target Start/End: Complemental strand, 8777044 - 8776962
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacg 442  Q
    |||||||||||||||| | | |||  ||||||||||||||| |||| ||| ||||||||||||| ||||||||||||||||||    
T  8777044 cactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacgacacg 8776962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 364 - 441
Target Start/End: Complemental strand, 32978967 - 32978889
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaat-cacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||| ||| |||  ||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||    
T  32978967 gacacgccgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcggtgtcggacacgacac 32978889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 445
Target Start/End: Original strand, 24645499 - 24645554
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||    
T  24645499 aaaaaatcacataattcagtatagttacaagtgtcggtgtcagacacgacacgtgt 24645554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 360 - 442
Target Start/End: Original strand, 16833296 - 16833378
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacg 442  Q
    |||||||||||||||| | | |||  ||||||||||||||||| || ||| |||||||||||||||||||  |||||||||||    
T  16833296 cactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgttagacacgacacg 16833378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 386 - 438
Target Start/End: Complemental strand, 6898326 - 6898274
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacga 438  Q
    |||||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  6898326 tttgaacaaattacataattaagtgtaattacaagtgtcggtgtcggacacga 6898274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 360 - 436
Target Start/End: Original strand, 7938104 - 7938180
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacac 436  Q
    |||||||||||||||| ||| |||  ||||||||||||| |||||| ||| |||||| ||||||||||||| |||||    
T  7938104 cactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtccgacac 7938180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 403909 - 403858
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    |||||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  403909 tttgaaaaaatcacataatttagtgtaactacaagtgtcggtgtcggacacg 403858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 9107441 - 9107370
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||| ||||||||||| ||| |||  ||||||||||||||| |||| ||| |||||||||||||||||||||    
T  9107441 cactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcg 9107370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 10770745 - 10770674
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||| ||| | | |||  |||||||||||||||||||| ||| |||||||||||||||||||||    
T  10770745 cactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 10770674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 12696312 - 12696383
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||  ||||||||||| |||||||| ||| |||||||||||||| ||||||    
T  12696312 cactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcg 12696383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 432
Target Start/End: Complemental strand, 7801227 - 7801155
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcgg 432  Q
    |||| ||||||||||| | | |||  |||||||||||||||||||| ||  ||||||||||||||||||||||    
T  7801227 cactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtcgg 7801155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 361 - 441
Target Start/End: Original strand, 19040341 - 19040421
Alignment:
Q  361 actgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||  || |||  ||||| |||||||||||||| ||| |||||| | ||||| ||||||||||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacacgacac 19040421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 8365590 - 8365519
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| | | |||  |||||||| |||||||||||  || |||||||||||||||||||||    
T  8365590 cactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcg 8365519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 31959147 - 31959213
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcgg 426  Q
    ||||||||||||| || ||| |||  |||||||||||||||||||  ||| ||||||||||||||||    
T  31959147 cactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcgg 31959213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 1191763 - 1191686
Alignment:
Q  368 cgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||| ||| |||  ||||||||| ||||| |||| ||| ||||||||||||||| ||| ||||||||| |||||    
T  1191763 cgccgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcgatgttggacacgacgcgtgt 1191686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 3209373 - 3209442
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaa-aatcacataattaagtataattacaagtgtcggtgtcgg 432  Q
    |||||||||||| ||| |||  |||||||| |||||||||||| ||| | ||||||||||||||||||||    
T  3209373 gacacgccgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcggtgtcgg 3209442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 5626767 - 5626686
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||| | | |||||||| | |||||||| || || ||| ||| || | ||||||||||||||||||||||    
T  5626767 cactgacacgccgacacaactaatttttttagaaaatcacttagttcagtgtaaatatatgtgtcggtgtcggacacgacac 5626686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 31384934 - 31384979
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||    
T  31384934 tttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 31384979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 360 - 436
Target Start/End: Complemental strand, 7265664 - 7265588
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacac 436  Q
    |||||||||||| |||  || |||  ||||| |||||||||||||| ||| |||||| | |||||||||||||||||    
T  7265664 cactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7265588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 360 - 440
Target Start/End: Complemental strand, 12868746 - 12868671
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgaca 440  Q
    |||||||||||||||| ||  |||  ||||||||||||||| ||     ||||||||| ||||||||||||||||||||||    
T  12868746 cactgacacgccgacacagttaataatttgaaaaaatcacacaa-----tataattactagtgtcggtgtcggacacgaca 12868671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 390 - 438
Target Start/End: Complemental strand, 26402721 - 26402673
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacga 438  Q
    ||||||| |||||||| ||| |||| |||||||||||||||||||||||    
T  26402721 aaaaaatgacataattcagtgtaatcacaagtgtcggtgtcggacacga 26402673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 433
Target Start/End: Complemental strand, 6327563 - 6327516
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcgga 433  Q
    ||||||||||| | |||||||||| ||||||||||||||| |||||||    
T  6327563 tttgaaaaaattatataattaagtgtaattacaagtgtcgatgtcgga 6327516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 429
Target Start/End: Original strand, 9522909 - 9522948
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgt 429  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  9522909 aaaaaatcacataattcagtgtaattacaagtgtcggtgt 9522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 34172207 - 34172258
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    ||||| |||||||||||||||| || ||||| | ||||||||||||||||||    
T  34172207 tttgagaaaatcacataattaattaaaattatatgtgtcggtgtcggacacg 34172258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 390 - 436
Target Start/End: Original strand, 1700370 - 1700416
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacac 436  Q
    ||||||||||||| || ||| |||||| |||||||||||||||||||    
T  1700370 aaaaaatcacatatttcagtgtaattataagtgtcggtgtcggacac 1700416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 386 - 440
Target Start/End: Original strand, 7377993 - 7378047
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgaca 440  Q
    ||||| |||||||||||||| | | |||||| | |||||||||||||||||||||    
T  7377993 tttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacacgaca 7378047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 393 - 431
Target Start/End: Complemental strand, 9911566 - 9911528
Alignment:
Q  393 aaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  9911566 aaatcacataattcagtgtaattacaagtgtcggtgtcg 9911528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 400 - 442
Target Start/End: Complemental strand, 16388248 - 16388206
Alignment:
Q  400 ataattaagtataattacaagtgtcggtgtcggacacgacacg 442  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||    
T  16388248 ataattcagtgtaattacaagtgtcggtgtcggacacggcacg 16388206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 363 - 438
Target Start/End: Complemental strand, 27904106 - 27904029
Alignment:
Q  363 tgacacgccgacatagcaaat--tttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacga 438  Q
    ||||||||||||||||| |||  |||   |||||| ||||||||| ||| ||||||||| |||||||||| |||||||    
T  27904106 tgacacgccgacatagctaataatttaaaaaaaaaacacataattcagtgtaattacaaatgtcggtgtcagacacga 27904029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 425
Target Start/End: Original strand, 1681746 - 1681811
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcg 425  Q
    |||| ||||||||||| | | |||  |||||||||||||| ||||| ||| |||||||||||||||    
T  1681746 cactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 423
Target Start/End: Complemental strand, 4118378 - 4118341
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgt 423  Q
    |||||||||||||||||||||| | |||||||||||||    
T  4118378 tttgaaaaaatcacataattaaatgtaattacaagtgt 4118341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 5732581 - 5732504
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    ||||||||||||||||  |  |||  ||||| ||||||||||| || ||| |||||| | ||||||||||||||||||    
T  5732581 cactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcggacacg 5732504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 431
Target Start/End: Complemental strand, 5970153 - 5970108
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| ||| ||||||||| ||| |||||||    
T  5970153 tttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcg 5970108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 7151426 - 7151471
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||||||| |||||| | |||| |||||||    
T  7151426 tttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcg 7151471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 7930319 - 7930364
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| |||  |||| |||||||||||||||    
T  7930319 tttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtcg 7930364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 7973672 - 7973713
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||| |||||||||||| |||||| ||||||||||||||    
T  7973672 aaaaaattacataattaagtgtaattataagtgtcggtgtcg 7973713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 9658867 - 9658952
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||||||||||||||  || |||  ||| | |||||||||||||| ||| |||||| |  |||||||||  ||||||||||||||    
T  9658867 cactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggtgttagacacgacacgtgt 9658952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 8786 - 8871
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| ||| |||  ||||||||||||| || ||| ||| |||||||||||||||||||||||||||||||||||    
T  8786 cactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtcggacacgacacgtgt 8871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 15680797 - 15680882
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||||||| |||  ||  |||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  15680797 cactgacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacacgtgt 15680882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 11061147 - 11061070
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    ||||||||| |||||| ||| |||  |||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  11061147 cactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtcagacacg 11061070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 363 - 438
Target Start/End: Original strand, 25481893 - 25481968
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacga 438  Q
    ||||||||||||| ||| |||  |||||||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  25481893 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcggacacga 25481968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 24339633 - 24339701
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||||| ||| |||  |||||||||||||||||||| ||| |||||||||||||||||||||    
T  24339633 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 24339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 3991338 - 3991383
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  3991338 tttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg 3991383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 9778514 - 9778559
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  9778514 tttgaaaaaatcacataattcagtataattacaagtgtcggtgtcg 9778559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 445
Target Start/End: Original strand, 21864826 - 21864881
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||||||| |||||| ||| ||||||||||||||| |||||||||||||||||||    
T  21864826 aaaaaatcatataatttagtgtaattacaagtgtcgctgtcggacacgacacgtgt 21864881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 21880166 - 21880221
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  21880166 tttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacacgacac 21880221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 386 - 431
Target Start/End: Complemental strand, 9408379 - 9408334
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  9408379 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 9408334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 3721107 - 3721158
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    ||||| |||||||||||||| |||||||||| | ||||||||||||||||||    
T  3721107 tttgagaaaatcacataatttagtataattatatgtgtcggtgtcggacacg 3721158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 5409907 - 5409836
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||| || | ||| |||  |||||||||||||||||||| |||  ||||||||||||||||||||    
T  5409907 cactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcg 5409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 8234160 - 8234215
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||||||||| |||||||| ||| || ||||||||| ||||||||||||||||||    
T  8234160 tttgaaaaaataacataattcagtgtagttacaagtgccggtgtcggacacgacac 8234215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 22602781 - 22602710
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||||||||  | ||||| ||||| |||||||||||||| ||| |||||| | ||||||||||||    
T  22602781 cactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcg 22602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 360 - 439
Target Start/End: Original strand, 26733292 - 26733371
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgac 439  Q
    |||||||||| |||||  || |||  ||||| |||||||||||||| ||| |||||| | ||||||||||||||||||||    
T  26733292 cactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcggacacgac 26733371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 363 - 441
Target Start/End: Complemental strand, 7197365 - 7197287
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||||||||||| ||| |||  ||| |||||||||  ||||| | | |||||||||||||||||||||||||| ||||    
T  7197365 tgacacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtcggacacaacac 7197287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 360 - 430
Target Start/End: Original strand, 7438694 - 7438764
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtc 430  Q
    |||||||| ||||||| ||  |||  |||||||||||||||||||| | | ||||||||||||||||||||    
T  7438694 cactgacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 2334268 - 2334309
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||||||||||||||||||||    
T  2334268 aaaaaatcacataatttagtgtaattacaagtgtcggtgtcg 2334309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 18039017 - 18039058
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||||||||||||||||||||    
T  18039017 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 18039058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 439
Target Start/End: Original strand, 19213821 - 19213870
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgac 439  Q
    |||||||||||||||  ||| ||| |||||||||||||||||||||||||    
T  19213821 aaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcggacacgac 19213870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 21560521 - 21560562
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||||||||||||||||||||    
T  21560521 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 21560562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 24105666 - 24105751
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| ||| |||  |||||||||||  ||| ||| ||| |||||||||||||||| ||||| ||| ||| ||||    
T  24105666 cactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcggagtcgggcacaacatgtgt 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 427
Target Start/End: Complemental strand, 26033506 - 26033465
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggt 427  Q
    |||||||||||||||||||| ||| |||||||||||||||||    
T  26033506 tttgaaaaaatcacataattcagtgtaattacaagtgtcggt 26033465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 383 - 439
Target Start/End: Complemental strand, 18213081 - 18213025
Alignment:
Q  383 ttttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgac 439  Q
    |||||| | |||||||||||||| ||| |||||| | ||||||||||||||||||||    
T  18213081 tttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcggacacgac 18213025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 13770679 - 13770750
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||| ||||||||| ||| |||  ||| ||||||| |||||||| ||| ||||||||||||||| |||||    
T  13770679 cactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcg 13770750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 18215257 - 18215186
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||| ||||||||||  ||| |||  |||||||||||||||||||  ||| || ||||||||||||||||||    
T  18215257 cactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcg 18215186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 27945029 - 27945100
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||||||||   | |||  ||||| ||||| |||||||| ||| |||||||||||||||||||||    
T  27945029 cactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcg 27945100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 436
Target Start/End: Original strand, 28155563 - 28155634
Alignment:
Q  365 acacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacac 436  Q
    |||||||||||  || |||  ||||| ||||| ||||||||  || ||||||||||||||||||||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcggtgtcggacac 28155634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 33994226 - 33994281
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||||||  |||||||||| |||  ||||||||||||||||||| ||||||||||    
T  33994226 tttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtcagacacgacac 33994281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 43027540 - 43027469
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||| ||||  ||| |||  |||||||||||||||||||  ||| ||| |||||||||||||||||    
T  43027540 cactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcg 43027469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 384 - 430
Target Start/End: Original strand, 48438558 - 48438604
Alignment:
Q  384 tttttgaaaaaatcacataattaagtataattacaagtgtcggtgtc 430  Q
    |||||||||||||||||||||| | | |||||||| |||||||||||    
T  48438558 tttttgaaaaaatcacataattcaatgtaattacacgtgtcggtgtc 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 598228 - 598281
Alignment:
Q  392 aaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||| ||||||| | |||||  ||||||||||||| ||||||||||||||    
T  598228 aaaatcacgtaattaaatgtaattgtaagtgtcggtgtcagacacgacacgtgt 598281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 441
Target Start/End: Original strand, 9482922 - 9483003
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||||||| ||||||| ||  ||  ||||| ||||||||| |||| ||| |||||| | ||||||||||||||| ||||||    
T  9482922 cactgacacaccgacatcgctgataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacgcgacac 9483003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 441
Target Start/End: Original strand, 20549779 - 20549860
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||||||| ||||||  || |||  ||||| |||||||| ||||| ||| |||||| | ||||||||||||||||| ||||    
T  20549779 cactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacacaacac 20549860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 431
Target Start/End: Complemental strand, 32094061 - 32094020
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| ||||||||| |||||||||||    
T  32094061 aaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 32094020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 21191127 - 21191042
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||| ||||||| ||| |||  |||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||    
T  21191127 cactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgt 21191042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 360 - 442
Target Start/End: Original strand, 6247610 - 6247692
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacg 442  Q
    |||||||||||||||| | | |||  |||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  6247610 cactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacggcacg 6247692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 21576816 - 21576731
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||| ||||| ||| ||| |||  |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  21576816 cactgatacgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgt 21576731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 363 - 434
Target Start/End: Original strand, 8420018 - 8420089
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggac 434  Q
    ||||||||||||||||| |||  ||||||||||| |||||||| | | ||||||||||||||||||||||||    
T  8420018 tgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtcggac 8420089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 441
Target Start/End: Original strand, 15884006 - 15884057
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  15884006 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacac 15884057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 33178014 - 33178089
Alignment:
Q  361 actgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacac 436  Q
    ||||||||||||||| | | |||  ||| |||||||||||||||| ||| ||||||||||||||||||||||||||    
T  33178014 actgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacac 33178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 360 - 426
Target Start/End: Original strand, 14674257 - 14674323
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcgg 426  Q
    |||||||||||||||| ||| |||  |||||||||||||||||||| ||| ||||||||||||||||    
T  14674257 cactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcgg 14674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 31084311 - 31084401
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcg-----gtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| ||| |||  |||||||||||||||||||| | | |||||||||||||||     ||||||||||||||||||||    
T  31084311 cactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgt 31084401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 445
Target Start/End: Original strand, 42893352 - 42893433
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||| |||||| ||| |||  |||||||||||||||||||  ||| |||||||||||||||||||| ||||| ||||||||    
T  42893352 gacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacacaacacgtgt 42893433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 39698529 - 39698600
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||| |||| ||| |||  |||||||||||||||||||| ||| |||||||||||||| ||||||    
T  39698529 cactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 39698600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 43564895 - 43564954
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||||    
T  43564895 tttggaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacatgtgt 43564954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 15382468 - 15382539
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaa--tcacataattaagtataattacaagtgtcggtgtcgg 432  Q
    ||||||||||||| ||| |||  ||||||||||  ||| |||||| ||||||||||||||||||||||||||    
T  15382468 tgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtcgg 15382539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 440
Target Start/End: Complemental strand, 24906372 - 24906292
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgaca 440  Q
    |||||||||||| ||| ||  |||  ||||||||||| |||||||| ||| ||||||||||||||||| ||||||| ||||    
T  24906372 cactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtatcggacatgaca 24906292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 19579689 - 19579760
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||| ||||||||| ||| |||  ||||| |||||||||||||| |||  ||||||||||||||||||||    
T  19579689 cactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcg 19579760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 21522738 - 21522809
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||  ||| ||||||| |||||||| ||| ||||||||| |||||||||||    
T  21522738 cactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcg 21522809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 21533304 - 21533375
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||  ||| ||||||| |||||||| ||| ||||||||| |||||||||||    
T  21533304 cactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcg 21533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 28588719 - 28588664
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||| |||||||||||||| ||| |||||| | ||||||||||||||||||||||    
T  28588719 tttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacacgacac 28588664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 12199948 - 12199989
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| |||| ||||||||||||||||||||    
T  12199948 aaaaaatcacataattcagtacaattacaagtgtcggtgtcg 12199989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 431
Target Start/End: Complemental strand, 13287444 - 13287399
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| ||| ||| |||||||||||||||||    
T  13287444 tttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcg 13287399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 360 - 436
Target Start/End: Complemental strand, 6326368 - 6326292
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacac 436  Q
    ||||||||||||||||| || | |  ||||| ||||| |||||||| ||| |||||||||||||| | |||||||||    
T  6326368 cactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaattacaagtgtcagcgtcggacac 6326292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 27932249 - 27932308
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||| ||||| |||||||| ||| ||||||||| | | |||||||||||||||||||||    
T  27932249 tttgagaaaattacataattcagtgtaattacaaatcttggtgtcggacacgacacgtgt 27932308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 30502433 - 30502378
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||| |||||||| ||||| ||| |||||| | ||||||||||||||||||||||    
T  30502433 tttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacac 30502378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 30542776 - 30542721
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||| |||||||| ||||| ||| |||||| | ||||||||||||||||||||||    
T  30542776 tttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacacgacac 30542721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 37328915 - 37328844
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||| || |||||| |||||||  |||| |||||||||| |||| ||| |||||||| ||||||||||||    
T  37328915 cactgatacaccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtcg 37328844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 21351976 - 21351906
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtc 430  Q
    ||||||||| |||||| | | |||  || |||||| |||||||||| ||| ||||||||||||||||||||    
T  21351976 cactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtc 21351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 361 - 431
Target Start/End: Original strand, 41633724 - 41633794
Alignment:
Q  361 actgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||| |||||| ||| |||  ||||||||| | |||||||| ||| ||||||||| |||||||||||    
T  41633724 actgacactccgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcg 41633794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 423
Target Start/End: Original strand, 4105246 - 4105310
Alignment:
Q  361 actgacacgccgacatagcaaattttttgaaaaaa--tcacataattaagtataattacaagtgt 423  Q
    ||||||||||||||||| | |||  ||||||||||  |||||||||| ||| |||||||||||||    
T  4105246 actgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 7677719 - 7677764
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||||||| |||  ||||| ||||||||||||||    
T  7677719 tttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcg 7677764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 409
Target Start/End: Complemental strand, 19552614 - 19552565
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagt 409  Q
    |||||||||||||||| ||  |||  ||||||||||||||||||||||||    
T  19552614 cactgacacgccgacacagttaataatttgaaaaaatcacataattaagt 19552565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 19820428 - 19820391
Alignment:
Q  399 cataattaagtataattacaagtgtcggtgtcggacac 436  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  19820428 cataattaagtacaattataagtgtcggtgtcggacac 19820391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 30099105 - 30099024
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||| | | || ||||| ||| |||| |||||||  || |||||| | |||||||||||||| |||||||||||    
T  30099105 gacacgccgacacaactaaattttttaaacaatcgcataattctgtgtaattatatgtgtcggtgtcggatacgacacgtgt 30099024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 533 - 448
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||| |||||||||  || |||  ||||||||||||||| |||| ||| ||||||||||||||||||||||||||||| |||||    
T  533 cactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgt 448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 9e-17; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 6940243 - 6940328
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| ||| |||  ||| ||||| | |||||||||||| ||||||||||||||||| || ||||||||||||||    
T  6940243 cactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcggtatccgacacgacacgtgt 6940328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 15972861 - 15972946
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| |   |||  ||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  15972861 cactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtcggacacgacacgtgt 15972946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 18841084 - 18841003
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||||||||| |||| | | |||  ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  18841084 cactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacgacac 18841003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 20242798 - 20242713
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| | | |||||||| | |||||||||||||| ||| |||||| | ||||||||||||||||| ||||||||    
T  20242798 cactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacaacacgtgt 20242713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 441
Target Start/End: Complemental strand, 30404921 - 30404840
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||||||||||||||  |  |||  |||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||    
T  30404921 cactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggcgtcggacacgacac 30404840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 37558965 - 37559050
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| ||| |||  |||| ||||||||||||||| | | ||||||||||||||||||||||||  |||||||||    
T  37558965 cactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacttgacacgtgt 37559050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 38117230 - 38117145
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| ||| |||  ||||||||||||||||| ||  || ||||||||||||| |||||||||||| ||||||||    
T  38117230 cactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcggacacaacacgtgt 38117145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 390 - 441
Target Start/End: Complemental strand, 2438760 - 2438709
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  2438760 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacac 2438709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 37419731 - 37419802
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||||||||| ||||||  ||||||||||||||| |||| ||| |||||||||||| ||||||||    
T  37419731 cactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcg 37419802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 445
Target Start/End: Original strand, 5040752 - 5040807
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| | | |||||||||||||||||||||||||||||| ||||    
T  5040752 aaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacatgtgt 5040807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 19536438 - 19536391
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  19536438 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacg 19536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 20539745 - 20539674
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||| ||||| ||| |||  ||||||||||||| |||||| ||| |||||||||||||||||||||    
T  20539745 cactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcg 20539674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 364 - 430
Target Start/End: Complemental strand, 11223930 - 11223864
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtc 430  Q
    ||||||| |||| ||| ||| |||||||||||| |||||||| ||| ||||||||||||||||||||    
T  11223930 gacacgctgacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 431
Target Start/End: Complemental strand, 12668493 - 12668423
Alignment:
Q  361 actgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||||||||| | |||  ||||||||||| |||||||| ||| |||||| ||||||||||||||    
T  12668493 actgacacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcg 12668423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 21624254 - 21624332
Alignment:
Q  360 cactgacacgccgacatagcaaatt-ttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    |||||||||||||||| ||| |||  |||| |||||||  ||||||| ||| |||||||||||||||||||||||||||    
T  21624254 cactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcggtgtcggacacg 21624332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 390 - 445
Target Start/End: Original strand, 28596487 - 28596542
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||| ||||||||| | ||| |||||| ||||||||||||||||||||||||||||    
T  28596487 aaaacatcacataagtcagtgtaattataagtgtcggtgtcggacacgacacgtgt 28596542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 30717601 - 30717530
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||  |||||| ||| |||  |||||||||||||||||||| ||| ||||||||||||||| |||||    
T  30717601 cactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcg 30717530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 12224212 - 12224296
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaa--tcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||||||| ||||||| |||  ||||||||||  || ||||||  | | |||||||||||||||||||||||||||| ||||||    
T  12224212 tgacacgccaacatagctaataatttgaaaaaaaatcccataatccaatgtaattacaagtgtcggtgtcggacacgatacgtgt 12224296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 393 - 441
Target Start/End: Original strand, 5367213 - 5367261
Alignment:
Q  393 aaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||||||||||| ||| |||||| | ||||||||||||||||||||||    
T  5367213 aaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacac 5367261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 360 - 436
Target Start/End: Original strand, 18421951 - 18422027
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacac 436  Q
    |||||||||||||||| |   |||  ||| |||| ||||||||||| ||| ||||||||||||||||||||| ||||    
T  18421951 cactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtcgaacac 18422027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 360 - 424
Target Start/End: Complemental strand, 21374770 - 21374706
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtc 424  Q
    |||| ||||||||||| ||| |||  ||||||||||| |||||||| ||| ||||||||||||||    
T  21374770 cactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 43586051 - 43585991
Alignment:
Q  385 ttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||| ||||| |||||||| | | |||| ||||||||||||||||||||||| ||||||    
T  43586051 ttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacacgatacgtgt 43585991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 14996295 - 14996224
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaa-tcacataattaagtataattacaagtgtcggtgtc 430  Q
    |||||||| ||||||| ||| |||  |||||||||| ||| |||||| ||| ||||||||||||||||||||    
T  14996295 cactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 14996224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 18256021 - 18255974
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    |||||||||||||||| | | |||||| ||||||||||||||||||||    
T  18256021 aaaaaatcacataatttaatgtaattagaagtgtcggtgtcggacacg 18255974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 34785053 - 34784982
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||| |||||| | | |||||||| | |||||||||||||| ||| |||||| | ||||||||||||    
T  34785053 cactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcg 34784982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 974761 - 974806
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||| ||||||| ||| ||| |||||||||||||||||||||    
T  974761 tttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcg 974806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 15657878 - 15657923
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||| ||||||||||||||| ||| ||||||||| |||||||||||    
T  15657878 tttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 15657923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 20473310 - 20473387
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacg 437  Q
    |||||||| ||||||| | | |||  ||| ||||| ||| |||||| ||| ||||||||||||||| |||||||||||    
T  20473310 cactgacatgccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtcggacacg 20473387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 431
Target Start/End: Complemental strand, 23058483 - 23058442
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||  ||| |||||||||||||||||||||    
T  23058483 aaaaaatcacataatccagtgtaattacaagtgtcggtgtcg 23058442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 431
Target Start/End: Original strand, 30335431 - 30335476
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||| |||||||| ||| ||||||||| |||||||||||    
T  30335431 tttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtcg 30335476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 33153442 - 33153483
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||||||||||||| ||||||    
T  33153442 aaaaaatcacataattcagtgtaattacaagtgtccgtgtcg 33153483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 38442325 - 38442366
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| | |||||||| ||||||||||||||    
T  38442325 aaaaaatcacataattcaatataattataagtgtcggtgtcg 38442366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 360 - 443
Target Start/End: Complemental strand, 7103 - 7020
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgt 443  Q
    |||||| ||| ||||| ||| |||  ||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||||||    
T  7103 cactgatacgtcgacacagctaataatttgaaaaaattacataatttagtataattacaagtgtaggtgtcggacacaacacgt 7020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 70292 - 70351
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    ||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  70292 tttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggacacgacacgtgt 70351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 360 - 445
Target Start/End: Original strand, 51799 - 51887
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaag---tgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||| ||| |||  |||||||||||||||||||| ||| ||||||||||   |||||||||| ||||||| ||||||    
T  51799 cactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttgtcggtgtcagacacgatacgtgt 51887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 20163 - 20231
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||||| ||| |||  |||||||||||||||||||| ||| |||||||||||||| ||||||    
T  20163 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 20231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 364 - 445
Target Start/End: Original strand, 14522 - 14600
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||| | | |||  |||||||||||||||||||| ||| |||||||||||   |||||||||||||||||||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagt---ggtgtcggacacgacacgtgt 14600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 445
Target Start/End: Complemental strand, 45563 - 45516
Alignment:
Q  398 acataattaagtataattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||    
T  45563 acataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgt 45516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 46673 - 46741
Alignment:
Q  363 tgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    ||||||||||||| ||  |||  |||||||||||||||||||| ||| ||||||||| |||||||||||    
T  46673 tgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcggtgtcg 46741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 17794 - 17750
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtc 430  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  17794 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 17750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 386 - 441
Target Start/End: Original strand, 1658 - 1713
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgacac 441  Q
    ||||| ||||||| ||||||  ||||||||| ||||||||||||||||||||||||    
T  1658 tttgagaaaatcatataatttggtataattataagtgtcggtgtcggacacgacac 1713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 241582 - 241653
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||  |||| ||||||||||||||| ||| ||||||  |||||||||||||    
T  241582 cactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcg 241653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 411 - 445
Target Start/End: Complemental strand, 5056 - 5022
Alignment:
Q  411 taattacaagtgtcggtgtcggacacgacacgtgt 445  Q
    |||||||||||||||||||||||||||||||||||    
T  5056 taattacaagtgtcggtgtcggacacgacacgtgt 5022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 386 - 428
Target Start/End: Original strand, 130496 - 130538
Alignment:
Q  386 tttgaaaaaatcacataattaagtataattacaagtgtcggtg 428  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  130496 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtg 130538  T

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Target: scaffold0025 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 23788 - 23829
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||||||||||||||||||||    
T  23788 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcg 23829  T

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Target: scaffold0306 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 360 - 432
Target Start/End: Original strand, 13388 - 13460
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcgg 432  Q
    |||||||||||||||| | | |||  ||||| |||||||||||||| |||  ||||||||| |||||||||||    
T  13388 cactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcgg 13460  T

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Target: scaffold0152 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 360 - 432
Target Start/End: Complemental strand, 21939 - 21867
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcgg 432  Q
    |||||||||||||||| | | |||  ||||| |||||||||||||| |||  ||||||||| |||||||||||    
T  21939 cactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcgg 21867  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 364 - 440
Target Start/End: Original strand, 8002 - 8077
Alignment:
Q  364 gacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcggacacgaca 440  Q
    |||||||||||| | | |||  ||||||||||||| |||||  ||| |||||| |||||||||||||||||||||||    
T  8002 gacacgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta-aagtgtcggtgtcggacacgaca 8077  T

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Target: scaffold0450 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 431
Target Start/End: Complemental strand, 8706 - 8635
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||| ||||||| | | |||  |||||||| |||||||||||  |||||||||||| |||||||||||    
T  8706 cactgacatgccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcg 8635  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 430
Target Start/End: Complemental strand, 178890 - 178819
Alignment:
Q  360 cactgacacgccgacatagcaaattttttgaaaaaatca-cataattaagtataattacaagtgtcggtgtc 430  Q
    |||||||||||||||| | | |||  ||||||||||||| ||||||| ||| |||||||||||||| |||||    
T  178890 cactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtcagtgtc 178819  T

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Target: scaffold0475 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 402 - 444
Target Start/End: Original strand, 3338 - 3380
Alignment:
Q  402 aattaagtataattacaagtgtcggtgtcggacacgacacgtg 444  Q
    |||||||| |||||||||||||| |||||||||| ||||||||    
T  3338 aattaagtgtaattacaagtgtcagtgtcggacaagacacgtg 3380  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 23438 - 23479
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||||| ||||||||||||||    
T  23438 aaaaaatcacataattcagtgtaattataagtgtcggtgtcg 23479  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 431
Target Start/End: Complemental strand, 3890 - 3849
Alignment:
Q  390 aaaaaatcacataattaagtataattacaagtgtcggtgtcg 431  Q
    |||||||||||||||| ||| |||||||||||||| ||||||    
T  3890 aaaaaatcacataattcagtgtaattacaagtgtcagtgtcg 3849  T

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