View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3675-4-Insertion-6 (Length: 351)

Name: NF3675-4-Insertion-6
Description: NF3675-4
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3675-4-Insertion-6
NF3675-4-Insertion-6
[»] chr1 (54 HSPs)
chr1 (145-281)||(3708284-3708421)
chr1 (6-133)||(3708123-3708249)
chr1 (145-260)||(48715230-48715346)
chr1 (145-251)||(43189661-43189768)
chr1 (145-259)||(1043225-1043340)
chr1 (145-257)||(20409559-20409672)
chr1 (145-257)||(37104120-37104233)
chr1 (145-259)||(28949246-28949361)
chr1 (145-259)||(37346853-37346968)
chr1 (6-71)||(24851686-24851751)
chr1 (7-71)||(36551600-36551664)
chr1 (8-71)||(2472762-2472825)
chr1 (145-259)||(6916879-6916994)
chr1 (145-259)||(38330425-38330540)
chr1 (145-259)||(52895718-52895833)
chr1 (6-71)||(24589960-24590026)
chr1 (6-68)||(47654883-47654945)
chr1 (7-71)||(33039826-33039891)
chr1 (145-247)||(1036469-1036572)
chr1 (145-259)||(9781640-9781755)
chr1 (145-264)||(13012997-13013117)
chr1 (145-248)||(25256625-25256729)
chr1 (145-259)||(3426846-3426961)
chr1 (6-57)||(5984919-5984969)
chr1 (6-57)||(25257349-25257399)
chr1 (6-57)||(30324452-30324502)
chr1 (145-259)||(31653407-31653522)
chr1 (20-71)||(41675841-41675892)
chr1 (146-247)||(29167957-29168059)
chr1 (145-252)||(30323720-30323828)
chr1 (145-259)||(2364675-2364790)
chr1 (145-259)||(8132181-8132296)
chr1 (17-72)||(38218598-38218653)
chr1 (145-259)||(38948730-38948845)
chr1 (6-71)||(32380917-32380983)
chr1 (145-249)||(14167092-14167197)
chr1 (6-47)||(28658727-28658768)
chr1 (161-259)||(2472875-2472974)
chr1 (145-249)||(10822410-10822516)
chr1 (286-328)||(3708444-3708485)
chr1 (145-252)||(5984232-5984340)
chr1 (6-57)||(6916187-6916238)
chr1 (6-57)||(28948532-28948583)
chr1 (156-259)||(29861799-29861903)
chr1 (6-57)||(36367503-36367554)
chr1 (6-57)||(37104382-37104433)
chr1 (6-57)||(38331181-38331232)
chr1 (145-248)||(40776004-40776108)
chr1 (145-203)||(14334215-14334273)
chr1 (145-203)||(28659305-28659363)
chr1 (96-133)||(34096486-34096523)
chr1 (97-133)||(2472857-2472893)
chr1 (6-57)||(8132914-8132965)
chr1 (6-57)||(52895026-52895077)
[»] chr5 (49 HSPs)
chr5 (6-71)||(27085565-27085630)
chr5 (145-267)||(30777527-30777650)
chr5 (6-71)||(17138091-17138156)
chr5 (145-259)||(26716271-26716386)
chr5 (145-259)||(26986011-26986126)
chr5 (145-259)||(32707836-32707951)
chr5 (150-259)||(10656818-10656928)
chr5 (145-259)||(39690768-39690883)
chr5 (145-250)||(30284612-30284718)
chr5 (6-71)||(11907507-11907572)
chr5 (6-71)||(18001803-18001868)
chr5 (7-71)||(41233522-41233586)
chr5 (145-259)||(1639787-1639902)
chr5 (145-259)||(1795390-1795505)
chr5 (161-259)||(30918376-30918475)
chr5 (6-68)||(5722196-5722258)
chr5 (6-71)||(22738054-22738118)
chr5 (145-257)||(33829753-33829866)
chr5 (6-71)||(26691832-26691898)
chr5 (6-71)||(26961564-26961630)
chr5 (9-71)||(30284445-30284507)
chr5 (7-71)||(5612279-5612344)
chr5 (145-249)||(11906226-11906331)
chr5 (145-252)||(26691621-26691729)
chr5 (145-252)||(26961353-26961461)
chr5 (7-71)||(30777248-30777312)
chr5 (145-248)||(41392717-41392821)
chr5 (145-259)||(9792317-9792432)
chr5 (145-259)||(32728714-32728829)
chr5 (6-71)||(34032578-34032643)
chr5 (6-57)||(1639113-1639163)
chr5 (145-259)||(32624875-32624990)
chr5 (145-252)||(17138259-17138366)
chr5 (145-251)||(5721993-5722100)
chr5 (23-66)||(11694423-11694465)
chr5 (145-248)||(34032378-34032482)
chr5 (6-57)||(9793040-9793091)
chr5 (6-57)||(39690054-39690105)
chr5 (161-248)||(41233388-41233476)
chr5 (206-259)||(6243225-6243278)
chr5 (206-259)||(12852117-12852170)
chr5 (96-133)||(25749754-25749791)
chr5 (96-133)||(26716421-26716458)
chr5 (96-133)||(26986161-26986198)
chr5 (27-71)||(6242901-6242945)
chr5 (145-201)||(12190442-12190498)
chr5 (97-133)||(17138188-17138224)
chr5 (146-190)||(21251533-21251577)
chr5 (102-134)||(27938306-27938338)
[»] scaffold0640 (1 HSPs)
scaffold0640 (145-259)||(8097-8212)
[»] chr8 (51 HSPs)
chr8 (145-259)||(32877435-32877550)
chr8 (145-259)||(38388665-38388780)
chr8 (145-262)||(2872915-2873033)
chr8 (7-71)||(40412759-40412823)
chr8 (145-251)||(22201342-22201449)
chr8 (145-259)||(28876571-28876686)
chr8 (145-259)||(32759371-32759486)
chr8 (145-259)||(37372257-37372372)
chr8 (6-71)||(27109032-27109097)
chr8 (7-71)||(8170944-8171008)
chr8 (145-260)||(25022122-25022238)
chr8 (145-268)||(43771709-43771833)
chr8 (145-259)||(12580558-12580673)
chr8 (145-259)||(13422206-13422321)
chr8 (145-259)||(16384615-16384730)
chr8 (145-259)||(34901387-34901502)
chr8 (145-259)||(36483433-36483548)
chr8 (145-259)||(6028485-6028600)
chr8 (145-259)||(4245938-4246053)
chr8 (6-57)||(12579861-12579911)
chr8 (6-57)||(32760098-32760148)
chr8 (145-259)||(45217225-45217340)
chr8 (145-250)||(32424928-32425034)
chr8 (14-71)||(7411818-7411875)
chr8 (6-47)||(36484176-36484217)
chr8 (145-252)||(5818316-5818424)
chr8 (150-248)||(19948006-19948105)
chr8 (6-57)||(32638539-32638589)
chr8 (6-57)||(37669312-37669362)
chr8 (186-260)||(40412432-40412507)
chr8 (6-68)||(38388886-38388948)
chr8 (149-251)||(27886196-27886299)
chr8 (149-251)||(27944854-27944957)
chr8 (44-133)||(3892112-3892207)
chr8 (7-40)||(29355865-29355898)
chr8 (6-57)||(4246671-4246722)
chr8 (6-57)||(5540164-5540215)
chr8 (176-259)||(19436272-19436356)
chr8 (176-259)||(19572421-19572505)
chr8 (6-57)||(22201143-22201194)
chr8 (6-57)||(28875890-28875941)
chr8 (6-57)||(34900694-34900745)
chr8 (218-262)||(41099365-41099409)
chr8 (145-259)||(3891960-3892075)
chr8 (145-259)||(29355621-29355736)
chr8 (186-248)||(32638902-32638965)
chr8 (145-203)||(17702550-17702608)
chr8 (187-251)||(5539441-5539505)
chr8 (8-44)||(27968338-27968374)
chr8 (6-58)||(41098804-41098856)
chr8 (6-57)||(45216545-45216596)
[»] chr7 (55 HSPs)
chr7 (145-259)||(25969392-25969507)
chr7 (6-70)||(21180050-21180114)
chr7 (6-71)||(23078946-23079011)
chr7 (145-248)||(34122622-34122726)
chr7 (145-259)||(27353916-27354031)
chr7 (145-259)||(48163403-48163518)
chr7 (145-246)||(9250427-9250529)
chr7 (145-249)||(26845901-26846006)
chr7 (145-259)||(26773717-26773832)
chr7 (145-259)||(34238153-34238268)
chr7 (145-259)||(38262994-38263109)
chr7 (7-133)||(40041523-40041655)
chr7 (145-259)||(40095645-40095760)
chr7 (9-71)||(11058661-11058723)
chr7 (6-68)||(33454286-33454348)
chr7 (6-71)||(36763632-36763698)
chr7 (145-257)||(1043076-1043189)
chr7 (7-72)||(15878262-15878327)
chr7 (6-71)||(36757853-36757918)
chr7 (6-71)||(36767377-36767442)
chr7 (145-260)||(11829683-11829799)
chr7 (145-260)||(27555374-27555490)
chr7 (23-71)||(44959989-44960037)
chr7 (172-261)||(4291505-4291595)
chr7 (7-71)||(9283699-9283763)
chr7 (7-71)||(25969720-25969784)
chr7 (145-259)||(33454065-33454180)
chr7 (145-262)||(19510515-19510633)
chr7 (145-250)||(35159869-35159975)
chr7 (6-71)||(35160077-35160140)
chr7 (6-47)||(47238075-47238116)
chr7 (7-71)||(1400106-1400170)
chr7 (6-57)||(36661208-36661258)
chr7 (33-71)||(47719952-47719990)
chr7 (147-259)||(38064590-38064703)
chr7 (187-259)||(47238654-47238727)
chr7 (7-71)||(9250149-9250212)
chr7 (161-252)||(23079061-23079153)
chr7 (145-260)||(44960140-44960256)
chr7 (6-57)||(11830432-11830482)
chr7 (145-247)||(21409398-21409501)
chr7 (145-190)||(1363017-1363062)
chr7 (7-69)||(38064881-38064947)
chr7 (205-257)||(15878410-15878462)
chr7 (6-57)||(16851046-16851097)
chr7 (6-57)||(27354184-27354235)
chr7 (6-57)||(27555170-27555221)
chr7 (6-57)||(48163671-48163722)
chr7 (145-259)||(16850781-16850896)
chr7 (186-252)||(36202824-36202891)
chr7 (206-261)||(42896995-42897050)
chr7 (145-203)||(8028749-8028807)
chr7 (96-133)||(23970059-23970096)
chr7 (206-259)||(39520795-39520848)
chr7 (6-57)||(40096401-40096452)
[»] chr2 (47 HSPs)
chr2 (145-259)||(33324816-33324931)
chr2 (145-259)||(7876712-7876827)
chr2 (145-259)||(38602327-38602442)
chr2 (7-71)||(31236024-31236088)
chr2 (145-259)||(28746657-28746772)
chr2 (145-259)||(4170507-4170622)
chr2 (145-259)||(16561798-16561913)
chr2 (145-259)||(40308902-40309017)
chr2 (145-250)||(34146187-34146293)
chr2 (14-71)||(3545425-3545482)
chr2 (6-71)||(10573710-10573775)
chr2 (145-249)||(35996651-35996756)
chr2 (145-259)||(18300970-18301085)
chr2 (145-258)||(2319274-2319388)
chr2 (6-71)||(2319491-2319556)
chr2 (145-261)||(6497654-6497771)
chr2 (145-257)||(22484267-22484380)
chr2 (145-257)||(22570937-22571050)
chr2 (7-71)||(34146396-34146460)
chr2 (7-71)||(35342534-35342597)
chr2 (7-71)||(45159014-45159078)
chr2 (6-57)||(6496996-6497046)
chr2 (145-259)||(7807379-7807494)
chr2 (161-262)||(24585525-24585626)
chr2 (145-249)||(3545586-3545691)
chr2 (145-249)||(4355333-4355438)
chr2 (145-257)||(44156597-44156710)
chr2 (145-248)||(1005522-1005625)
chr2 (145-259)||(1776441-1776556)
chr2 (145-247)||(4561798-4561901)
chr2 (145-259)||(6124171-6124286)
chr2 (145-251)||(8482922-8483029)
chr2 (5-71)||(21104698-21104765)
chr2 (145-251)||(35342323-35342430)
chr2 (145-246)||(12206036-12206138)
chr2 (145-259)||(31236191-31236306)
chr2 (186-259)||(20536773-20536847)
chr2 (26-71)||(9293321-9293366)
chr2 (186-259)||(12819299-12819372)
chr2 (6-57)||(7807180-7807231)
chr2 (6-57)||(22485011-22485062)
chr2 (145-248)||(37134303-37134407)
chr2 (6-57)||(40308161-40308212)
chr2 (96-133)||(14824287-14824324)
chr2 (6-57)||(4169845-4169896)
chr2 (97-133)||(14217084-14217120)
chr2 (219-259)||(45159378-45159418)
[»] chr3 (69 HSPs)
chr3 (6-71)||(13353032-13353097)
chr3 (6-71)||(30787398-30787463)
chr3 (145-261)||(35389746-35389863)
chr3 (145-257)||(13748452-13748565)
chr3 (7-71)||(2567107-2567171)
chr3 (145-259)||(7327710-7327825)
chr3 (145-259)||(40497328-40497443)
chr3 (145-259)||(52121178-52121293)
chr3 (145-250)||(52684208-52684314)
chr3 (6-71)||(983402-983467)
chr3 (6-71)||(19421632-19421697)
chr3 (6-71)||(19878939-19879004)
chr3 (6-71)||(45057138-45057203)
chr3 (6-71)||(55268853-55268918)
chr3 (7-71)||(28968727-28968791)
chr3 (7-71)||(47642222-47642286)
chr3 (145-259)||(1679703-1679818)
chr3 (145-259)||(42464912-42465027)
chr3 (6-71)||(38888922-38888988)
chr3 (145-252)||(28968515-28968623)
chr3 (7-71)||(52684543-52684607)
chr3 (9-68)||(6134222-6134281)
chr3 (12-71)||(7899562-7899620)
chr3 (145-251)||(25937069-25937176)
chr3 (145-247)||(30226430-30226533)
chr3 (145-259)||(37996816-37996931)
chr3 (6-68)||(20509993-20510055)
chr3 (145-259)||(55269021-55269132)
chr3 (7-71)||(21157566-21157631)
chr3 (145-249)||(22289726-22289831)
chr3 (145-262)||(2122699-2122820)
chr3 (6-57)||(22610600-22610650)
chr3 (6-57)||(25936402-25936452)
chr3 (145-259)||(41742077-41742192)
chr3 (6-57)||(45532386-45532436)
chr3 (7-69)||(212724-212786)
chr3 (148-257)||(6134390-6134500)
chr3 (145-257)||(48122825-48122938)
chr3 (7-71)||(21006201-21006265)
chr3 (145-259)||(25700760-25700873)
chr3 (145-259)||(30787567-30787682)
chr3 (145-259)||(38889085-38889199)
chr3 (145-247)||(42229684-42229787)
chr3 (145-259)||(52505838-52505952)
chr3 (145-250)||(28882683-28882789)
chr3 (161-262)||(29915856-29915958)
chr3 (161-262)||(29965009-29965111)
chr3 (172-259)||(22310703-22310791)
chr3 (23-71)||(28548260-28548308)
chr3 (145-247)||(39663968-39664071)
chr3 (186-259)||(22611420-22611494)
chr3 (206-259)||(2567454-2567507)
chr3 (27-68)||(25700980-25701021)
chr3 (145-202)||(33240006-33240063)
chr3 (145-202)||(45532985-45533042)
chr3 (6-57)||(1679004-1679055)
chr3 (6-57)||(7327968-7328019)
chr3 (186-249)||(13353232-13353296)
chr3 (206-258)||(19420904-19420956)
chr3 (6-57)||(37996614-37996665)
chr3 (145-201)||(45347354-45347410)
chr3 (157-215)||(45057249-45057308)
chr3 (187-260)||(19879140-19879214)
chr3 (96-133)||(42229812-42229849)
chr3 (97-133)||(25700909-25700945)
chr3 (97-133)||(41742006-41742042)
chr3 (6-57)||(48123568-48123619)
chr3 (6-57)||(52505147-52505198)
chr3 (186-257)||(53192498-53192570)
[»] chr4 (51 HSPs)
chr4 (7-71)||(24784588-24784652)
chr4 (7-71)||(24823614-24823678)
chr4 (7-71)||(52721570-52721634)
chr4 (145-252)||(19738702-19738810)
chr4 (145-259)||(28376994-28377109)
chr4 (8-71)||(46431772-46431835)
chr4 (145-259)||(52122874-52122989)
chr4 (145-257)||(5325726-5325839)
chr4 (6-71)||(44521883-44521948)
chr4 (145-261)||(53322333-53322450)
chr4 (7-71)||(3109143-3109207)
chr4 (7-71)||(17892464-17892528)
chr4 (7-71)||(24793569-24793633)
chr4 (7-71)||(36943885-36943949)
chr4 (7-71)||(39957904-39957968)
chr4 (145-259)||(5834828-5834943)
chr4 (6-68)||(55900985-55901047)
chr4 (145-257)||(8064114-8064227)
chr4 (145-251)||(46431938-46432045)
chr4 (145-250)||(17892255-17892361)
chr4 (145-259)||(47607108-47607222)
chr4 (145-257)||(40694070-40694183)
chr4 (145-257)||(55901144-55901257)
chr4 (161-252)||(51858837-51858929)
chr4 (145-259)||(41145610-41145725)
chr4 (6-57)||(41146349-41146399)
chr4 (145-247)||(52721274-52721377)
chr4 (6-71)||(722467-722532)
chr4 (6-71)||(754386-754451)
chr4 (145-257)||(36511939-36512052)
chr4 (183-247)||(44121885-44121950)
chr4 (20-72)||(37992385-37992437)
chr4 (181-259)||(10257698-10257777)
chr4 (145-251)||(42472574-42472681)
chr4 (6-57)||(53323084-53323134)
chr4 (160-248)||(27981905-27981994)
chr4 (27-71)||(2586552-2586596)
chr4 (145-248)||(4400477-4400581)
chr4 (145-192)||(39957630-39957677)
chr4 (14-57)||(52572934-52572976)
chr4 (149-257)||(2586336-2586445)
chr4 (22-71)||(49470496-49470545)
chr4 (6-57)||(3402897-3402948)
chr4 (6-57)||(8063420-8063471)
chr4 (186-257)||(38492305-38492377)
chr4 (27-71)||(42630342-42630386)
chr4 (156-257)||(1176981-1177083)
chr4 (206-259)||(14795021-14795074)
chr4 (102-134)||(17892395-17892427)
chr4 (97-133)||(40694218-40694254)
chr4 (44-72)||(40694285-40694313)
[»] chr6 (30 HSPs)
chr6 (145-259)||(26327153-26327267)
chr6 (7-71)||(3212785-3212849)
chr6 (6-133)||(7255069-7255202)
chr6 (145-247)||(31195874-31195977)
chr6 (6-133)||(31079750-31079880)
chr6 (145-257)||(234306-234419)
chr6 (6-134)||(10894356-10894490)
chr6 (145-259)||(1036831-1036946)
chr6 (145-259)||(27083983-27084098)
chr6 (7-68)||(6707879-6707940)
chr6 (7-71)||(32018313-32018376)
chr6 (145-259)||(3212475-3212590)
chr6 (145-259)||(25834501-25834616)
chr6 (6-72)||(13061211-13061277)
chr6 (145-248)||(8356967-8357071)
chr6 (6-57)||(8357624-8357674)
chr6 (145-262)||(32130664-32130782)
chr6 (6-58)||(26327524-26327576)
chr6 (145-248)||(32017986-32018090)
chr6 (145-257)||(7188784-7188894)
chr6 (145-261)||(3299137-3299254)
chr6 (27-133)||(13607643-13607755)
chr6 (6-57)||(1036139-1036190)
chr6 (150-257)||(13607795-13607903)
chr6 (145-247)||(19128163-19128266)
chr6 (6-57)||(7188102-7188154)
chr6 (23-71)||(22988960-22989008)
chr6 (23-71)||(23799388-23799436)
chr6 (41-69)||(13045248-13045276)
chr6 (6-57)||(31195674-31195725)
[»] scaffold0060 (1 HSPs)
scaffold0060 (145-259)||(30449-30564)
[»] scaffold0250 (1 HSPs)
scaffold0250 (145-252)||(5517-5625)
[»] scaffold0285 (2 HSPs)
scaffold0285 (145-250)||(13257-13363)
scaffold0285 (8-58)||(13607-13657)
[»] scaffold0240 (1 HSPs)
scaffold0240 (148-265)||(10592-10710)
[»] scaffold0112 (1 HSPs)
scaffold0112 (6-57)||(41408-41458)
[»] scaffold0037 (2 HSPs)
scaffold0037 (6-57)||(27110-27160)
scaffold0037 (186-259)||(27827-27901)
[»] scaffold0005 (1 HSPs)
scaffold0005 (206-259)||(44657-44710)


Alignment Details
Target: chr1 (Bit Score: 98; Significance: 3e-48; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 145 - 281
Target Start/End: Original strand, 3708284 - 3708421
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||| |||| || |||||||| ||||| |||||||||| |||||| |||||||    
T  3708284 aaaatttaatattcgaatactctcctgatacgtatcgaaaagtatcgggcatgtattggtgtaggatatgcagaggatacgatacgtcatccattttgaa 3708383  T
Q  244 gtatcggggtttcacaactcttaatcaataatttgatc 281  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3708384 gtatcggggtttcacaactcttaatcaataatttgatc 3708421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 3708123 - 3708249
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaatgaaaaatactggggcaagtatccggtgcgggat 105  Q
    ||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||  |||||  |||    
T  3708123 caaaaaagaagcattatatctaaaaaagaacacatcggtactcaagagttaagttattttagtcaatgaaaaatattggggcaagtat-tggtgcaagat 3708221  T
Q  106 aattattggatactctcctgatacgtat 133  Q
    ||||||||||||||||||||||||||||    
T  3708222 aattattggatactctcctgatacgtat 3708249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 48715230 - 48715346
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| | |||||||| |||||||||| |||||||||||| |||||||| ||||||||||||| ||||||||||||  |||| |||||||    
T  48715230 aaaatttaatcttcggacactctcctgatacgtatcgggaagtatcgggccggtatcggtgtaggatacgcaggagatacgatacaatatccattttgaa 48715329  T
Q  244 gtatcggggtttcacaa 260  Q
    |||||||||||||||||    
T  48715330 gtatcggggtttcacaa 48715346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 145 - 251
Target Start/End: Complemental strand, 43189768 - 43189661
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||| | |||||||||||  |||||| |||||||||| |||||||    
T  43189768 aaaatttaatatttggatactctcctgatacgtatcgagaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaa 43189669  T
Q  244 gtatcggg 251  Q
    ||||||||    
T  43189668 gtatcggg 43189661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 1043340 - 1043225
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| |||||||||| |||||||    
T  1043340 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaa 1043241  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  1043240 gtatcggggcttcaca 1043225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 20409559 - 20409672
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  20409559 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 20409658  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  20409659 gtatcggggcttca 20409672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 37104233 - 37104120
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||  ||||||||||||||||||||| | |||||||||||  |||||||||| |||||| |||||||    
T  37104233 aaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaa 37104134  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  37104133 gtatcggggcttca 37104120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 28949246 - 28949361
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||  ||||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  28949246 aaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 28949345  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  28949346 gtatcggggcttcaca 28949361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 37346853 - 37346968
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||| ||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  37346853 aaaatttaatatttggatactcccccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 37346952  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  37346953 gtatcggggcttcaca 37346968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 24851751 - 24851686
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  24851751 caaaaaagaatcactatatcaaaaaaagaacacatcattactcaagagttaagttattttagttaa 24851686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 36551664 - 36551600
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  36551664 aaaaaagaaacactatattcaaaaaagaacacatcactactcaagagttaagttattttagttaa 36551600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 2472762 - 2472825
Alignment:
Q  8 aaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  2472762 aaaaagaagcactatatccaaaaaataacacattcgtactcaagagttaagttattttagttaa 2472825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 6916879 - 6916994
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||||||   |||||||||  ||||||||||  |||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  6916879 aaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 6916978  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  6916979 gtatcggggcttcaca 6916994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 38330540 - 38330425
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||||||   |||||||||  ||||||||||  |||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  38330540 aaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 38330441  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  38330440 gtatcggggcttcaca 38330425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 52895718 - 52895833
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||||||   |||||||||  ||||||||||  |||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  52895718 aaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 52895817  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  52895818 gtatcggggcttcaca 52895833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 24589960 - 24590026
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaa-cacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  24589960 caaaaaagaaacactatattcaaaaaagaagcacatcagtactcaagagttaagttattttagttaa 24590026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 47654945 - 47654883
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagt 68  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||    
T  47654945 caaaaaagaagcactatatccgtaaaagaacacatcagtactcaagagttaagtttttttagt 47654883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 33039891 - 33039826
Alignment:
Q  7 aaaaaagaagcactatat-ccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33039891 aaaaaaaaaacactatattccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 33039826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 1036572 - 1036469
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  ||||||||||  |||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  1036572 aaaatttaatatttggatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 1036473  T
Q  244 gtat 247  Q
    ||||    
T  1036472 gtat 1036469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 9781755 - 9781640
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||| ||||| |||| ||||||| || ||||||||||  |||||||||||||||||||| | |||||||||||  |||||||||| ||| || |||||||    
T  9781755 aaaaattaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcaaccattttgaa 9781656  T
Q  244 gtatcggggtttcaca 259  Q
    ||||| ||| ||||||    
T  9781655 gtatcagggcttcaca 9781640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 264
Target Start/End: Original strand, 13012997 - 13013117
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatc-gggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||| | | | ||||| |||  |||||||||  |||||| |||||||    
T  13012997 aaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcagtgcatgatacacaggggatacgatatgtcatccattttgaa 13013096  T
Q  244 gtatcggggtttcacaactct 264  Q
    |||| |||| |||||| ||||    
T  13013097 gtattggggcttcacagctct 13013117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 248
Target Start/End: Complemental strand, 25256729 - 25256625
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| |||||||||||  |||||||||| |||||||||| |||||||||| | || ||||||||| |||||  ||| |||||| |||||||    
T  25256729 aaaatttaatatttgaatactctccggatacgtatcgggaagtatcggacaggtatcggtgcagaatacgcagaggatacagtacgtcatccattttgaa 25256630  T
Q  244 gtatc 248  Q
     ||||    
T  25256629 atatc 25256625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 3426961 - 3426846
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||  |||||||||| || ||||||| | |||||||||||  ||||| |||| |||||| |||| ||    
T  3426961 aaaatttaatatttggatactctccggatacgtatcaggaagtatcggacatgtatcggtgcaggatacgcaggggatacaatacgtcatccattttaaa 3426862  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  3426861 gtatcggggcttcaca 3426846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 5984969 - 5984919
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5984969 caaaaaagaagcactatatccaaaaaagaacacatcagtact-aagagttaa 5984919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 25257399 - 25257349
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25257399 caaaaaagaagcactatatccaaaaaagaacacatcagtact-aagagttaa 25257349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 30324502 - 30324452
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30324502 caaaaaagaagcactatatccaaaaaagaacacatcagtact-aagagttaa 30324452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 31653407 - 31653522
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| |||||||||||||| |||||| | | ||||| ||   |||||||||||| |||| |||||||    
T  31653407 aaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcagatatcggtgcatgatacacaagggatacgatacattatccattttgaa 31653506  T
Q  244 gtatcggggtttcaca 259  Q
    ||||| ||| ||||||    
T  31653507 gtatcagggcttcaca 31653522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 41675841 - 41675892
Alignment:
Q  20 tatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  41675841 tatattcaaaaaagaacacatcagtactcaagagttaagttattttaattaa 41675892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 29168059 - 29167957
Alignment:
Q  146 aaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaag 244  Q
    ||||||||| |||| |||||||||| ||||||| || ||||||||  ||||||||||| | |||||||||||  |||| ||||| |||||| ||||||||    
T  29168059 aaatttaatcttcggatactctcctgatacgtaacgggaagtatcatgcaggtatcggtgcaggatacgcaggggatatgatacgtcatccattttgaag 29167960  T
Q  245 tat 247  Q
    |||    
T  29167959 tat 29167957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 30323828 - 30323720
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatc-gggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| |||||||||||||| |||| | | ||||||| ||||  ||||| | | |||||| |||||||    
T  30323828 aaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcagatatcagtgcaggatacacagagaatacgttgcgtcatccattttgaa 30323729  T
Q  244 gtatcgggg 252  Q
    |||||||||    
T  30323728 gtatcgggg 30323720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 2364790 - 2364675
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcg-ggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || ||||||||||  |||||| ||||||||||||  | |||||||||||  |||| | ||| | |||| |||||||    
T  2364790 aaaatttaatcttcggatactcttctgatacgtatcggaaagtattgggcaggtatcgatgcaggatacgcaggggatatggtacgttatccattttgaa 2364691  T
Q  244 gtatcggggtttcaca 259  Q
    ||||| ||||||||||    
T  2364690 gtatctgggtttcaca 2364675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 8132296 - 8132181
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| |||||||||  || ||||||| | |||||||||||  |||||| ||| |||||  |||||||    
T  8132296 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgaacatgtatcggtgcaggatacgcaggggatacggtacgtcatctattttgaa 8132197  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||| | ||||||    
T  8132196 gtatcggagcttcaca 8132181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 38218653 - 38218598
Alignment:
Q  17 cactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaat 72  Q
    ||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||    
T  38218653 cactatattaaaaaaagaacacatcaatactcaagagttaagttattttagctaat 38218598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 38948845 - 38948730
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||| ||| |  |||||||||||||||||| |||||| |||||| | |||||||||||  |||||| ||| |||||| |||| ||    
T  38948845 aaaatttaatatttggatattcttcggatacgtatcgagaagtattgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttaaa 38948746  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||| | ||||||    
T  38948745 gtatcggagcttcaca 38948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 32380917 - 32380983
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaaca-catcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||| ||||||||||||| || | ||||||| ||| ||||||||||||||||||||||    
T  32380917 caaaaaagaagcattatatccaaaaaaaaaaaacatcagtgctctagagttaagttattttagttaa 32380983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 14167197 - 14167092
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || |||||||||  |||||||| | ||| |||||| | |||||||||||  |||||||||  |||||| |||||||    
T  14167197 aaaatttaatcttcggatactcttctgatacgtatcaggaagtatcagacagatatcggtgcaggatacgcaggtgatacgataagtcatccattttgaa 14167098  T
Q  244 gtatcg 249  Q
    ||||||    
T  14167097 gtatcg 14167092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 28658727 - 28658768
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtact 47  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  28658727 caaaaaagaagcactatatcaaaaaaagaacacatcagtact 28658768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 2472875 - 2472974
Alignment:
Q  161 atactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||||||| ||||||||||  ||||||| |||||||| ||| | |||||| ||||  |||||||||| |||||  |||||||||||||| | ||||||    
T  2472875 atactctcctgatacgtatcggaaagtatcaggcaggtaccggtgcaggatatgcaggggatacgatacgtcatctattttgaagtatcggagcttcaca 2472974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 10822516 - 10822410
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgggt--aggatacgcagaagatacgatacatcatccgttttga 242  Q
    |||||||||| |||| |||||||||| | | |||||| |||||||| | ||| ||||||||  |||||||||||   ||| ||||| |||||| ||||||    
T  10822516 aaaatttaatcttcggatactctcctgagatgtatcgggaagtatcagacagatatcgggtgcaggatacgcagggaatatgatacgtcatccattttga 10822417  T
Q  243 agtatcg 249  Q
    |||||||    
T  10822416 agtatcg 10822410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 328
Target Start/End: Original strand, 3708444 - 3708485
Alignment:
Q  286 taatttagaaatttaagtggctacaatattaattaaagaagtt 328  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  3708444 taatttagaaatttaagtg-ctacaatattaattaaagaagtt 3708485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 5984340 - 5984232
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||| | ||||||||  ||| ||||||| | || ||||||||  |||||  ||| |||||| |||||||    
T  5984340 aaaatttaatatttggatactctccagatacgtattgggaagtatcaagcatgtatcggtgcagaatacgcaggggatacagtacgtcatccattttgaa 5984241  T
Q  244 gtatcgggg 252  Q
    |||||||||    
T  5984240 gtatcgggg 5984232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 6916187 - 6916238
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  6916187 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 6916238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 28948532 - 28948583
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  28948532 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 28948583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 259
Target Start/End: Complemental strand, 29861903 - 29861799
Alignment:
Q  156 ttcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtt 254  Q
    |||| ||||||| || ||||||||||  ||||||||||||||| | || | | |||||| || |||||| |||| ||| || |||||||||||||||| |    
T  29861903 ttcggatactcttctgatacgtatcggaaagtatcgggcaggtgtgggtgcatgatacgtaggagatacaatacgtcaaccattttgaagtatcggggct 29861804  T
Q  255 tcaca 259  Q
    |||||    
T  29861803 tcaca 29861799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 36367503 - 36367554
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  36367503 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 36367554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 37104433 - 37104382
Alignment:
Q  6 caaaaaagaagcactatatccaa-aaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  37104433 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 37104382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 38331232 - 38331181
Alignment:
Q  6 caaaaaagaagcactatatccaa-aaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  38331232 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 38331181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 248
Target Start/End: Complemental strand, 40776108 - 40776004
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||| ||| |||||||||||||||||||  |||| ||| || | |||||||||||  |||||  ||| || ||| |||||||    
T  40776108 aaaatttaatcttcggatactcgcctgatacgtatcgagaagtatcatgcagatattggtgcaggatacgcaggggatacattacgtcttccattttgaa 40776009  T
Q  244 gtatc 248  Q
    |||||    
T  40776008 gtatc 40776004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 14334273 - 14334215
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg 203  Q
    ||||||||||||| | |||||||||  |||||||||| | |||||||| ||||||||||    
T  14334273 aaaatttaatatttggatactctcccaatacgtatcggggagtatcggacaggtatcgg 14334215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 28659305 - 28659363
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg 203  Q
    ||||||||||||| | |||||||||  ||||||||||  |||||||||||| |||||||    
T  28659305 aaaatttaatatttggatactctccggatacgtatcggaaagtatcgggcatgtatcgg 28659363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 34096486 - 34096523
Alignment:
Q  96 ggtgcgggataattattggatactctcctgatacgtat 133  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  34096486 ggtgcaggataattattggatactttcctgatacgtat 34096523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 2472857 - 2472893
Alignment:
Q  97 gtgcgggataattattggatactctcctgatacgtat 133  Q
    |||| |||||||||| |||||||||||||||||||||    
T  2472857 gtgctggataattatcggatactctcctgatacgtat 2472893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 8132965 - 8132914
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaa-gaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||| ||||||| ||||||||||||||| |||||||||    
T  8132965 caaaaaagaatcactatattcaaaaaaagaacacatcagtact-aagagttaa 8132914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 52895026 - 52895077
Alignment:
Q  6 caaaaaagaagcactatatccaaaa-aagaacacatcagtactcaagagttaa 57  Q
    ||||||| || |||||||||||||| ||||||||||||||||| |||||||||    
T  52895026 caaaaaaaaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 52895077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 4e-29; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 27085630 - 27085565
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27085630 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 27085565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 145 - 267
Target Start/End: Original strand, 30777527 - 30777650
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | ||||||||||   |||||||||| |||||| |||||||    
T  30777527 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaagggatacgatacgtcatccattttgaa 30777626  T
Q  244 gtatcggggtttcacaactcttaa 267  Q
    ||||||||| |||||| |||||||    
T  30777627 gtatcggggcttcacagctcttaa 30777650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 17138091 - 17138156
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17138091 caaaaaagaagcactatatccaaaaaagaacacatcaatactcaagagttaagttattttagttaa 17138156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 26716386 - 26716271
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || |||||||||| |||||||| |||||||||||| |||||||||||||  |||||||||| |||||| |||||||    
T  26716386 aaaatttaatcttcggatactcttctgatacgtatcgggaagtatcaggcaggtatcggtgtaggatacgcaggggatacgatacgtcatccattttgaa 26716287  T
Q  244 gtatcggggtttcaca 259  Q
    |||||| || ||||||    
T  26716286 gtatcgaggcttcaca 26716271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 26986126 - 26986011
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || |||||||||| |||||||| |||||||||||| |||||||||||||  |||||||||| |||||| |||||||    
T  26986126 aaaatttaatcttcggatactcttctgatacgtatcgggaagtatcaggcaggtatcggtgtaggatacgcaggggatacgatacgtcatccattttgaa 26986027  T
Q  244 gtatcggggtttcaca 259  Q
    |||||| || ||||||    
T  26986026 gtatcgaggcttcaca 26986011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 32707836 - 32707951
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  32707836 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 32707935  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  32707936 gtatcggggcttcaca 32707951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 259
Target Start/End: Complemental strand, 10656928 - 10656818
Alignment:
Q  150 ttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatc 248  Q
    |||||||| | |||||||||  |||||||||||||||||||||||||||||||| | |||||||||||  |||||||||| |||||| |||| |||||||    
T  10656928 ttaatatttggatactctcccgatacgtatcgagaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttaaagtatc 10656829  T
Q  249 ggggtttcaca 259  Q
    |||| ||||||    
T  10656828 ggggcttcaca 10656818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 39690768 - 39690883
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||  ||||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  39690768 aaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 39690867  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  39690868 gtatcggggcttcaca 39690883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 250
Target Start/End: Original strand, 30284612 - 30284718
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||||| |||||||||| |||||||| |||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  30284612 aaaatttaatcttcggatactctcctgatacgtatcgggaagtatcaggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 30284711  T
Q  244 gtatcgg 250  Q
    |||||||    
T  30284712 gtatcgg 30284718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 11907572 - 11907507
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||    
T  11907572 caaaaaagaagcactatatcaaaaaaagaatacatcagtactcaggagttaagttattttagttaa 11907507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 18001803 - 18001868
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||    
T  18001803 caaaaaagaagcactatattcaaaaaagaacacatcagtactcaataattaagttattttagttaa 18001868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 41233586 - 41233522
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  41233586 aaaaaagaaggactatatccaaaaaagaacacattagtactcaacagttaagttattttagttaa 41233522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 1639787 - 1639902
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||||| |  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||  ||| |||||| |||||||    
T  1639787 aaaatttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaa 1639886  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  1639887 gtatcggggcttcaca 1639902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 1795505 - 1795390
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || ||||||||||  |||||||||||||||||||| | |||||||| ||  |||||||||| ||| || |||||||    
T  1795505 aaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacggaggggatacgatacgtcaaccattttgaa 1795406  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  1795405 gtatcggggcttcaca 1795390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 161 - 259
Target Start/End: Complemental strand, 30918475 - 30918376
Alignment:
Q  161 atactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  ||||| |||| |||||| |||||||||||||||| ||||||    
T  30918475 atactctccgaatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacaatacgtcatccattttgaagtatcggggcttcaca 30918376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 5722258 - 5722196
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagt 68  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  5722258 caaaaaagaagcactatatccataaaagaacacataagtactcaagagttaagtttttttagt 5722196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 22738118 - 22738054
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||    
T  22738118 caaaaaagaagcactatatccaaaaa-gaacacatcagtgctcaagagttaaattattttagttaa 22738054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 33829866 - 33829753
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| |||||||| |||| ||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  33829866 aaaatttaatatttggatactctccggatacgtatcgggaagtatcaggcatgtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 33829767  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  33829766 gtatcggggcttca 33829753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 26691898 - 26691832
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaag-aacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| | ||||||||||||||||||    
T  26691898 caaaaaagaagcactatatccaaaaaaataacacatcagtactcaaaacttaagttattttagttaa 26691832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 26961630 - 26961564
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaag-aacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| | ||||||||||||||||||    
T  26961630 caaaaaagaagcactatatccaaaaaaataacacatcagtactcaaaacttaagttattttagttaa 26961564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 30284445 - 30284507
Alignment:
Q  9 aaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||| ||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||    
T  30284445 aaaaaaagcactatattcaaaaaagaacacatcactactcaggagttaagttattttagttaa 30284507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 5612279 - 5612344
Alignment:
Q  7 aaaaaagaagcactatatccaaaa-aagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| ||||    
T  5612279 aaaaaagaagcactatatccaaaaaaagaacacatcaatactcgagagttaagttattttaattaa 5612344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 11906331 - 11906226
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||||| |||||||||  |||||||||| |||||||||| ||| |||||| | |||||||||||   |||| |||| |||||| |||||||    
T  11906331 aaaatttaatattcggatactctccggatacgtatcgggaagtatcggacagatatcggtgcaggatacgcagggaatacaatacgtcatccattttgaa 11906232  T
Q  244 gtatcg 249  Q
    ||||||    
T  11906231 gtatcg 11906226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 26691729 - 26691621
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||| | |||||||||| |||||||| | |||||||||| | || ||||||||  |||||||||| |||||  |||||||    
T  26691729 aaaatttaatcttcggatactctcttgatacgtatcgggaagtatcagacaggtatcggtgcagaatacgcaggggatacgatacgtcatctattttgaa 26691630  T
Q  244 gtatcgggg 252  Q
    |||||||||    
T  26691629 gtatcgggg 26691621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 26961461 - 26961353
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||| | |||||||||| |||||||| | |||||||||| | || ||||||||  |||||||||| |||||  |||||||    
T  26961461 aaaatttaatcttcggatactctcttgatacgtatcgggaagtatcagacaggtatcggtgcagaatacgcaggggatacgatacgtcatctattttgaa 26961362  T
Q  244 gtatcgggg 252  Q
    |||||||||    
T  26961361 gtatcgggg 26961353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 30777248 - 30777312
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||| |||||||||||| |||||||||||||| | |||||||||||||| |||||||||||||    
T  30777248 aaaaaataagcactatatcaaaaaaagaacacataattactcaagagttaaattattttagttaa 30777312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 41392717 - 41392821
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||| ||  |||| ||||| ||||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  41392717 aaaatttaatatttggatactccccggatacatatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 41392816  T
Q  244 gtatc 248  Q
    |||||    
T  41392817 gtatc 41392821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 9792432 - 9792317
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcg-ggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||||||   |||||||||| ||||||||||||||||||||  | ||||||| |||  |||||| ||| |||||| |||| ||    
T  9792432 aaaatttaatatttggatactctctggatacgtatcgggaagtatcgggcaggtatcgatgcaggatacacaggggatacggtacgtcatccattttaaa 9792333  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  9792332 gtatcggggcttcaca 9792317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 32728714 - 32728829
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcg-ggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||| ||||||| | |||||||||  |||||||||| ||||||||||||||||||||  | | |||||||||  ||||| ||||||||||  |||||||    
T  32728714 aaaatctaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcgatgcaagatacgcaggggatacaatacatcatcaattttgaa 32728813  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||| | ||||||    
T  32728814 gtatcggagcttcaca 32728829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 34032643 - 34032578
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||| |||||||||||  |||||||||||||| ||||||||| |||||| |||||||||||||    
T  34032643 caaaaaataagcactatattaaaaaaagaacacattagtactcaaaagttaaattattttagttaa 34032578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 1639113 - 1639163
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  1639113 caaaaaagaagcactatatcctaaaaagaacacatcagtact-aagagttaa 1639163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 32624990 - 32624875
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcg-ggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||||| |  |||||||||| ||||||||||||||||||||  | | ||||| |||  |||||| ||| |||||| |||||||    
T  32624990 aaaatttaatatttggatactcttcgaatacgtatcgggaagtatcgggcaggtatcgatgcaagatacacaggggatacggtacgtcatccattttgaa 32624891  T
Q  244 gtatcggggtttcaca 259  Q
     |||||||| ||||||    
T  32624890 atatcggggcttcaca 32624875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 17138259 - 17138366
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||| |||||| |||||||||| |||||||| ||||  |||||| | |||||||||||  ||||| |||| |||||  |||||||    
T  17138259 aaaatttaatcttcggatattctcctgatacgtatcgggaagtatcaggcaattatcggtgcaggatacgcaggggatac-atacgtcatctattttgaa 17138357  T
Q  244 gtatcgggg 252  Q
    |||||||||    
T  17138358 gtatcgggg 17138366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 251
Target Start/End: Complemental strand, 5722100 - 5721993
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatc-gggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||| |||| ||| |||| ||||||||||||||| ||||| | | |||||||||||  |||||||||| |||||  |||| ||    
T  5722100 aaaatttaatcttcggatactttcctgatatgtattgagaagtatcgggcatgtatcagtgcaggatacgcaggggatacgatacgtcatcaattttaaa 5722001  T
Q  244 gtatcggg 251  Q
     |||||||    
T  5722000 atatcggg 5721993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 11694465 - 11694423
Alignment:
Q  23 atccaaaaaagaacacatcagtactcaagagttaagttatttta 66  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  11694465 atccaaaaaagaacacatcagtact-aagagttaagttatttta 11694423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 248
Target Start/End: Complemental strand, 34032482 - 34032378
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgggtag--gatacgcagaagatacgatacatcatccgttttga 242  Q
    |||| ||||| |||| |||||||||| |||||||||| ||||||||  ||||||||| |||||  ||||||||   ||| ||||||||||||  ||||||    
T  34032482 aaaaattaatcttcggatactctcctgatacgtatcgggaagtatcaagcaggtatc-ggtagatgatacgcaagggattcgatacatcatctattttga 34032384  T
Q  243 agtatc 248  Q
    ||||||    
T  34032383 agtatc 34032378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 9793091 - 9793040
Alignment:
Q  6 caaaaaagaagcactatatccaa-aaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  9793091 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 9793040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 39690054 - 39690105
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  39690054 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 39690105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 41233476 - 41233388
Alignment:
Q  161 atactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatc 248  Q
    |||||||||| |||||||||| |||||||| | || ||||||  | |||||||| || | ||||||||| |||||| ||||||||||||    
T  41233476 atactctcctgatacgtatcgggaagtatcagacatgtatcgttgcaggatacgtaggaaatacgatacgtcatccattttgaagtatc 41233388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 6243225 - 6243278
Alignment:
Q  206 aggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||||||||| ||||| |||| |||||| |||||||||||||| | ||||||    
T  6243225 aggatacgcagaggatacaatacgtcatccattttgaagtatcggagcttcaca 6243278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 12852170 - 12852117
Alignment:
Q  206 aggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||||||||  |||||| ||| |||||| |||||||||||||||| ||||||    
T  12852170 aggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 12852117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 25749791 - 25749754
Alignment:
Q  96 ggtgcgggataattattggatactctcctgatacgtat 133  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  25749791 ggtgcaggataattatcggatactctcctgatacgtat 25749754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 26716458 - 26716421
Alignment:
Q  96 ggtgcgggataattattggatactctcctgatacgtat 133  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  26716458 ggtgcaggataattatcggatactctcctgatacgtat 26716421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 26986198 - 26986161
Alignment:
Q  96 ggtgcgggataattattggatactctcctgatacgtat 133  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  26986198 ggtgcaggataattatcggatactctcctgatacgtat 26986161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 6242901 - 6242945
Alignment:
Q  27 aaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||| | ||||||||| || ||||||||||    
T  6242901 aaaaaagaacacatcagtatttaagagttaaattgttttagttaa 6242945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 12190498 - 12190442
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatc 201  Q
    |||||||||| |  |||||||||||| ||||||||| ||||||||||| ||| ||||    
T  12190498 aaaatttaatctctgaatactctcctgatacgtatcaagaagtatcggacagatatc 12190442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 17138188 - 17138224
Alignment:
Q  97 gtgcgggataattattggatactctcctgatacgtat 133  Q
    |||| |||||||||| |||||||||||||||||||||    
T  17138188 gtgcaggataattatcggatactctcctgatacgtat 17138224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 21251577 - 21251533
Alignment:
Q  146 aaatttaatattcgaatactctcctcatacgtatcgagaagtatc 190  Q
    |||||||||||||| |||||||||| ||||||||||  |||||||    
T  21251577 aaatttaatattcggatactctcctgatacgtatcggaaagtatc 21251533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 134
Target Start/End: Complemental strand, 27938338 - 27938306
Alignment:
Q  102 ggataattattggatactctcctgatacgtatt 134  Q
    |||||||||| ||||||||||||||||||||||    
T  27938338 ggataattatcggatactctcctgatacgtatt 27938306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 8097 - 8212
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| |||||||||| |||||||    
T  8097 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaa 8196  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  8197 gtatcggggcttcaca 8212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 32877550 - 32877435
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||||||| |||||| |||||||    
T  32877550 aaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaa 32877451  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  32877450 gtatcggggcttcaca 32877435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 38388780 - 38388665
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||| |||| | ||||||||||||||||||| |||||||||| | |||||||||||| ||||| ||||| ||||| |||||||    
T  38388780 aaaatttaatcttcggatactttcctgacacgtatcgagaagtatcggacaggtatcggtgcaggatacgcagaggatacaatacagcatccattttgaa 38388681  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||||||||||    
T  38388680 gtatcggggtttcaca 38388665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 145 - 262
Target Start/End: Original strand, 2872915 - 2873033
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||| ||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  2872915 aaaatttcatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 2873014  T
Q  244 gtatcggggtttcacaact 262  Q
    ||||||||| |||||||||    
T  2873015 gtatcggggcttcacaact 2873033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 40412823 - 40412759
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40412823 aaaaaaaaagcactatatcaaaaaaagaacacatcagtactcaagagttaagttattttagttaa 40412759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 251
Target Start/End: Original strand, 22201342 - 22201449
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  ||||||||||  |||||||||||||||||||| | |||||||||||  |||||||||| |||||| |||||||    
T  22201342 aaaatttaatatttggatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaa 22201441  T
Q  244 gtatcggg 251  Q
    ||||||||    
T  22201442 gtatcggg 22201449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 28876571 - 28876686
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||||||   |||||||||||||||||||||||||||||||| | |||||||||||  |||||  ||| |||||| |||||||    
T  28876571 aaaatttaatatttggatactctctggatacgtatcgagaagtatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaa 28876670  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  28876671 gtatcggggcttcaca 28876686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 32759486 - 32759371
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  32759486 aaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 32759387  T
Q  244 gtatcggggtttcaca 259  Q
    |||||| || ||||||    
T  32759386 gtatcgaggcttcaca 32759371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 37372372 - 37372257
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||||| |||||||||| |||||||| | |||||||| | | ||||||||||| ||||||||||| |||||| |||||||    
T  37372372 aaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacaggtatcagtgcaggatacgcaggagatacgatacgtcatccattttgaa 37372273  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||| | ||||||    
T  37372272 gtatcggagcttcaca 37372257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 27109032 - 27109097
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  27109032 caaaaaagaagcactatatccaaaaaagaacacatcggtacttaacagttaagttattttagttaa 27109097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 8170944 - 8171008
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||    
T  8170944 aaaaaagaagcactatatcgaaaaaagagcatatcagtactcaagagttaagttattttagttaa 8171008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 260
Target Start/End: Complemental strand, 25022238 - 25022122
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||  ||||||||||||||||||||| | ||||||||||| ||||||| ||  |||||| |||||||    
T  25022238 aaaatttaatatttggatactctcccgatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcaggagatacggtatgtcatccattttgaa 25022139  T
Q  244 gtatcggggtttcacaa 260  Q
    |||| |||| |||||||    
T  25022138 gtattggggcttcacaa 25022122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 268
Target Start/End: Original strand, 43771709 - 43771833
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||  |||||||||| || ||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  43771709 aaaatttaatatttggatactctccggatacgtatcaggaagtatcggacatgtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 43771808  T
Q  244 gtatcggggtttcacaactcttaat 268  Q
    ||||||||||||||||  |||||||    
T  43771809 gtatcggggtttcacaggtcttaat 43771833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 12580558 - 12580673
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| |||||||| | ||| |||||| | ||||||||||| ||||||| |||||||||  |||||||    
T  12580558 aaaatttaatatttggatactctccggatacgtatcgggaagtatcagacagttatcggtgcaggatacgcaggagatacggtacatcatctattttgaa 12580657  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  12580658 gtatcggggcttcaca 12580673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 13422321 - 13422206
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| |||||||| |||||||||||| | |||||| ||||  |||||| ||| |||||| |||||||    
T  13422321 aaaatttaatatttggatactctccgtatacgtatcgggaagtatcaggcaggtatcggtgcaggatatgcaggggatacggtacgtcatccattttgaa 13422222  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  13422221 gtatcggggcttcaca 13422206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 16384730 - 16384615
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||||| |  |||||||||| ||||||||||||||||||||| | ||||||| |||  |||||| ||| |||||| |||||||    
T  16384730 aaaatttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatactcaggggatacggtacgtcatccattttgaa 16384631  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  16384630 gtatcggggcttcaca 16384615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 34901387 - 34901502
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||||||   |||||||||  ||||||||||  |||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  34901387 aaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 34901486  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  34901487 gtatcggggcttcaca 34901502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 36483548 - 36483433
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||||| |  ||||||||||  |||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  36483548 aaaatttaatatttggatactcttcggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 36483449  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  36483448 gtatcggggcttcaca 36483433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 6028600 - 6028485
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  ||| ||||||  ||||||||||||| |||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  6028600 aaaatttaatatttggatactctcccgatatgtatcggaaagtatcgggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 6028501  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  6028500 gtatcggggcttcaca 6028485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 4246053 - 4245938
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||||| |  |||||||||| ||||||||||||||||||||| | |||||| ||||  |||||| ||| |||||  |||||||    
T  4246053 aaaatttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatatgcaggggatacggtacgtcatctattttgaa 4245954  T
Q  244 gtatcggggtttcaca 259  Q
    | ||||||| ||||||    
T  4245953 gcatcggggcttcaca 4245938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 12579861 - 12579911
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12579861 caaaaaagaagcactatatccaaaaaagaacacatcagtact-aagagttaa 12579911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 32760148 - 32760098
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  32760148 caaaaaagaagcactatatccaaaaaagaacacatcagtact-aagagttaa 32760098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 45217225 - 45217340
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  ||||||||||  || |||||| |||||||||| | |||||||||||  ||||| ||| ||||||| |||| ||    
T  45217225 aaaatttaatatttggatactctccggatacgtatcggaaaatatcggacaggtatcggtgcaggatacgcaggggatacaatatatcatccattttaaa 45217324  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  45217325 gtatcggggcttcaca 45217340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 32425034 - 32424928
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || |||||||||| |||||||| | |||||||||| | ||||||||||   |||||| ||| |||||| |||||||    
T  32425034 aaaatttaatcttcggatactcttctgatacgtatcgtgaagtatcagacaggtatcggtgcaggatacgcaagggatacggtacgtcatccattttgaa 32424935  T
Q  244 gtatcgg 250  Q
    |||||||    
T  32424934 gtatcgg 32424928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 7411875 - 7411818
Alignment:
Q  14 aagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||| | |||||||||||||||| || ||||||||||||||||||||||||||    
T  7411875 aagcactatgttcaaaaaagaacacatcggttctcaagagttaagttattttagttaa 7411818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 36484217 - 36484176
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtact 47  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36484217 caaaaaagaagcactatatccaaaaaagaacacatcagtact 36484176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 5818316 - 5818424
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||  |||||||||| |||| ||||| ||| ||||  ||||||||||| | ||||||||||   |||||||||| |||||| |||||||    
T  5818316 aaaatttaatcttcagatactctcctgatacatatcgggaaatatcatgcaggtatcggtgcaggatacgcaagtgatacgatacgtcatccattttgaa 5818415  T
Q  244 gtatcgggg 252  Q
    |||||||||    
T  5818416 gtatcgggg 5818424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 19948006 - 19948105
Alignment:
Q  150 ttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatc 248  Q
    |||||||| | |||||||||   ||||||||| ||||||||| ||||||||||| | |||||||||||  |||| ||||| |||||| ||||||||||||    
T  19948006 ttaatatttggatactctcccggtacgtatcgggaagtatcgagcaggtatcggtgcaggatacgcaggggatatgatacgtcatccattttgaagtatc 19948105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 32638539 - 32638589
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  32638539 caaaaaagaagcactatatccaaaaaagaacacatgagtact-aagagttaa 32638589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 37669362 - 37669312
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  37669362 caaaaaagaagcactatatccaaaaaagaacacatcaatact-aagagttaa 37669312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 260
Target Start/End: Complemental strand, 40412507 - 40412432
Alignment:
Q  186 gtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcacaa 260  Q
    |||||||||||||| ||| | |||||||||||  ||||||||||||||||| ||||||||||| |||| |||||||    
T  40412507 gtatcgggcaggtaacggtgcaggatacgcaggggatacgatacatcatccattttgaagtattggggcttcacaa 40412432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 38388948 - 38388886
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagt 68  Q
    |||||||||| | ||| ||||| |||||||||||||||||||| ||||||||||| |||||||    
T  38388948 caaaaaagaaactctacatccataaaagaacacatcagtactcgagagttaagtttttttagt 38388886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 27886299 - 27886196
Alignment:
Q  149 tttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtat 247  Q
    |||||| |||| |||||||||| |||||||||| ||||||||   |||||||||| | |||||| ||||   |||| |||| |||||| |||||||||||    
T  27886299 tttaatcttcggatactctcctgatacgtatcgggaagtatcaaccaggtatcggtgcaggatatgcagggaatacaatacgtcatccattttgaagtat 27886200  T
Q  248 cggg 251  Q
    ||||    
T  27886199 cggg 27886196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 27944957 - 27944854
Alignment:
Q  149 tttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtat 247  Q
    |||||| |||| |||||||||| |||||||||| ||||||||   |||||||||| | |||||| ||||   |||| |||| |||||| |||||||||||    
T  27944957 tttaatcttcggatactctcctgatacgtatcgggaagtatcaaccaggtatcggtgcaggatatgcagggaatacaatacgtcatccattttgaagtat 27944858  T
Q  248 cggg 251  Q
    ||||    
T  27944857 cggg 27944854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 3892207 - 3892112
Alignment:
Q  44 tactcaagagttaagttattttagttaa-------tgaaaaatactggggcaagtatccggtgcgggataattattggatactctcctgatacgtat 133  Q
    ||||||||||||||||||||||||||||       ||  || || ||||||| ||||| ||||| |||||||||| |||||||||||||||||||||    
T  3892207 tactcaagagttaagttattttagttaacattaattgggaagtattggggcaggtatc-ggtgcaggataattatcggatactctcctgatacgtat 3892112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 40
Target Start/End: Complemental strand, 29355898 - 29355865
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacat 40  Q
    ||||||||||||||||||||||||||||||||||    
T  29355898 aaaaaagaagcactatatccaaaaaagaacacat 29355865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 4246722 - 4246671
Alignment:
Q  6 caaaaaagaagcactatatccaa-aaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  4246722 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 4246671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 5540215 - 5540164
Alignment:
Q  6 caaaaaagaagcactatatccaa-aaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  5540215 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 5540164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 19436356 - 19436272
Alignment:
Q  176 gtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||| |||||||||| |||||||||| | ||||||||||   |||||| ||| |||||| |||||||||||||| | ||||||    
T  19436356 gtatcgggaagtatcggtcaggtatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatcggagcttcaca 19436272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 19572505 - 19572421
Alignment:
Q  176 gtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||| |||||||||| |||||||||| | ||||||||||   |||||| ||| |||||| |||||||||||||| | ||||||    
T  19572505 gtatcgggaagtatcggtcaggtatcggtgcaggatacgcaagggatacggtacgtcatccattttgaagtatcggagcttcaca 19572421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 22201143 - 22201194
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  22201143 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 22201194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 28875890 - 28875941
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  28875890 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 28875941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 34900694 - 34900745
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  34900694 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 34900745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 262
Target Start/End: Original strand, 41099365 - 41099409
Alignment:
Q  218 agatacgatacatcatccgttttgaagtatcggggtttcacaact 262  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||    
T  41099365 agatacaatacatcatccattttgaagtatcggggcttcacaact 41099409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 3892075 - 3891960
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||||||||||||   |||||||| |  ||||||| | || ||||||| | | |||||| || |||||  |||| |||||| |||||||    
T  3892075 aaaatttaatcttcgaatactctctcgatacgtattggaaagtatcagacaagtatcggtgcatgatacgtaggagatataatacgtcatccattttgaa 3891976  T
Q  244 gtatcggggtttcaca 259  Q
    | ||||||||||||||    
T  3891975 gaatcggggtttcaca 3891960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 29355736 - 29355621
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||||||  ||||||||| ||||||||  |||| |||||  | ||||||| |||  |||| ||||  |||||| |||||||    
T  29355736 aaaatttaatcttcggatactctcctgctacgtatcgggaagtatcaagcagctatcgatgcaggatacccaggggatatgatatgtcatccattttgaa 29355637  T
Q  244 gtatcggggtttcaca 259  Q
    ||||| ||| ||||||    
T  29355636 gtatcagggcttcaca 29355621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 32638902 - 32638965
Alignment:
Q  186 gtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatc 248  Q
    |||||||||||||||||| | |||||||||||  |||||| ||| |||||| ||||||||||||    
T  32638902 gtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatc 32638965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 17702608 - 17702550
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg 203  Q
    |||||||||| |||  |||||||||  |||||||||||| ||||||||| |||||||||    
T  17702608 aaaatttaattttcagatactctcccgatacgtatcgaggagtatcgggaaggtatcgg 17702550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 5539505 - 5539441
Alignment:
Q  187 tatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggg 251  Q
    ||||||||||||||||| | |||||||||||  |||||  |||||||||| |||||||||||||||    
T  5539505 tatcgggcaggtatcggtgcaggatacgcagg-gatacagtacatcatccattttgaagtatcggg 5539441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 27968374 - 27968338
Alignment:
Q  8 aaaaagaagcactatatccaaaaaagaacacatcagt 44  Q
    ||||| || ||||||||||||||||||||||||||||    
T  27968374 aaaaaaaaacactatatccaaaaaagaacacatcagt 27968338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 41098804 - 41098856
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaag 58  Q
    |||| ||||| ||||||||||| ||||||||||||| |||||| ||| |||||    
T  41098804 caaacaagaaacactatatccataaaagaacacatcggtactccagaattaag 41098856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 45216545 - 45216596
Alignment:
Q  6 caaaaaagaagcactatatccaaaa-aagaacacatcagtactcaagagttaa 57  Q
    |||||||||| || ||||||||||| ||||||||||||||||| |||||||||    
T  45216545 caaaaaagaatcattatatccaaaaaaagaacacatcagtact-aagagttaa 45216596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 6e-28; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 25969507 - 25969392
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||||||| |||||| |||||||    
T  25969507 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaa 25969408  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  25969407 gtatcggggcttcaca 25969392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 21180114 - 21180050
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagtta 70  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21180114 caaaaaataagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagtta 21180050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 23078946 - 23079011
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  23078946 caaaaaagaagcactatatccaaaaaagaacacatcagtacttaagagttaagttattttaattaa 23079011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 34122622 - 34122726
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||| |||||| ||| |||||| |||||||    
T  34122622 aaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagaggatacggtacgtcatccattttgaa 34122721  T
Q  244 gtatc 248  Q
    |||||    
T  34122722 gtatc 34122726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 27354031 - 27353916
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||   ||||| ||| |||||| |||||||    
T  27354031 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagggaatacggtacgtcatccattttgaa 27353932  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  27353931 gtatcggggcttcaca 27353916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 48163518 - 48163403
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| ||| ||| || |||||||    
T  48163518 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcacccattttgaa 48163419  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  48163418 gtatcggggcttcaca 48163403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 246
Target Start/End: Original strand, 9250427 - 9250529
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||||||| |||||| |||||||    
T  9250427 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaa 9250526  T
Q  244 gta 246  Q
    |||    
T  9250527 gta 9250529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 26845901 - 26846006
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||| ||||||||||||| | ||||||||||  ||||||| |||||||||| |||||||    
T  26845901 aaaatttaatatttggatactctccaaatacgtatcgggaagtattgggcaggtatcggtgcaggatacgcatgagatacggtacatcatccattttgaa 26846000  T
Q  244 gtatcg 249  Q
    ||||||    
T  26846001 gtatcg 26846006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 26773717 - 26773832
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  ||||||||||||||||||||||||| |||||| | ||||||||||   |||||||||| |||||  |||| ||    
T  26773717 aaaatttaatatttggatactctcccgatacgtatcgagaagtatcgggcagatatcggtgcaggatacgcaagggatacgatacgtcatcaattttaaa 26773816  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  26773817 gtatcggggcttcaca 26773832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 34238268 - 34238153
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  ||||||||||  |||||||||||||||||||| | || ||||||||  |||||| ||| |||||| |||||||    
T  34238268 aaaatttaatatttggatactctccgaatacgtatcggaaagtatcgggcaggtatcggtgcagaatacgcaggggatacggtacgtcatccattttgaa 34238169  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  34238168 gtatcggggcttcaca 34238153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 38263109 - 38262994
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcg-ggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  ||||||||||  |||||||||||||||||||  | ||||||||||||  ||||| ||| |||||| |||||||    
T  38263109 aaaatttaatatttggatactctccggatacgtatcggaaagtatcgggcaggtatcgatgcaggatacgcagagaatacggtacgtcatccattttgaa 38263010  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  38263009 gtatcggggcttcaca 38262994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 7 - 133
Target Start/End: Complemental strand, 40041655 - 40041523
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa-------tgaaaaatactggggcaagtatccggtg 99  Q
    |||||||||||| |||||| |||||||||||||||||||||||| |||||| |||||||||||||       ||  |||||  |||||| |||| | |||    
T  40041655 aaaaaagaagcattatatctaaaaaagaacacatcagtactcaatagttaaattattttagttaacattaattgggaaatatcggggcaggtat-cagtg 40041557  T
Q  100 cgggataattattggatactctcctgatacgtat 133  Q
    | |||||||||| |||||||||||||||||||||    
T  40041556 caggataattatcggatactctcctgatacgtat 40041523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 40095760 - 40095645
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||||||   |||||||||  ||||||||||  |||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  40095760 aaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 40095661  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  40095660 gtatcggggcttcaca 40095645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 11058723 - 11058661
Alignment:
Q  9 aaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11058723 aaaaaaagaactatatccaaaaaagaacacatcagtacacaagagttaagttattttagttaa 11058661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 33454348 - 33454286
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagt 68  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  33454348 caaaaaagaagcactatatccataaaagaacacataagtactcaagagttaagtttttttagt 33454286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 36763632 - 36763698
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaa-gaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  36763632 caaaaaagaggcactatatccaaaaaaaggacacatcagtactcaagagttaagttattttagttaa 36763698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 1043076 - 1043189
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  ||||||||||  ||||||| |||||||||||  | |||||||||||  |||||||||| |||||| |||||||    
T  1043076 aaaatttaatatttggatactctcccgatacgtatcggaaagtatcaggcaggtatcgatgcaggatacgcaggggatacgatacgtcatccattttgaa 1043175  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  1043176 gtatcggggcttca 1043189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 15878262 - 15878327
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaat 72  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||||||||||||||||||||||||    
T  15878262 aaaaaagaaacactatattaaaaaaagaacacatcaatactcaagagttaagttattttagttaat 15878327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 36757853 - 36757918
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||| ||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||    
T  36757853 caaaaaataagcactatatacaaaaaatgacacatcagtactcaagagttaagttattttagttaa 36757918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 36767377 - 36767442
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||| ||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||    
T  36767377 caaaaaataagcactatatacaaaaaatgacacatcagtactcaagagttaagttattttagttaa 36767442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 145 - 260
Target Start/End: Complemental strand, 11829799 - 11829683
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||| | |||||||| ||||| |||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  11829799 aaaatttaatatttggatactctccggatacgtattgggaagtatcaggcagatatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 11829700  T
Q  244 gtatcggggtttcacaa 260  Q
    ||||||||| |||||||    
T  11829699 gtatcggggcttcacaa 11829683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 27555374 - 27555490
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| |||||||||| |||||||||| | || |||||||||  ||||| ||| |||||| |||||||    
T  27555374 aaaatttaatatttggatactctccggatacgtatcgggaagtatcggacaggtatcggtgcagaatacgcagagaatacggtacgtcatccattttgaa 27555473  T
Q  244 gtatcggggtttcacaa 260  Q
    ||||| ||| |||||||    
T  27555474 gtatcagggcttcacaa 27555490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 44959989 - 44960037
Alignment:
Q  23 atccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44959989 atccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 44960037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 172 - 261
Target Start/End: Complemental strand, 4291595 - 4291505
Alignment:
Q  172 atacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcacaac 261  Q
    |||||||||| |||||||||| |||||||||| | |||||||||||  |||||| |||||||||| |||| ||||||||||| ||||||||    
T  4291595 atacgtatcgggaagtatcggacaggtatcggtgcaggatacgcaggggatacggtacatcatccattttaaagtatcggggcttcacaac 4291505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 9283699 - 9283763
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||| |||||||||||| |||||||||||||| | |||||||||||||| |||||||||||||    
T  9283699 aaaaaataagcactatatcaaaaaaagaacacataattactcaagagttaaattattttagttaa 9283763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 25969784 - 25969720
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||| |||||||||||| |||||||||||||| | |||||||||||||| |||||||||||||    
T  25969784 aaaaaataagcactatatcaaaaaaagaacacataattactcaagagttaaattattttagttaa 25969720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 33454180 - 33454065
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||| |||| ||||||||||||||||||| | ||  |||| | | |||||||||||  |||||||||| |||||| |||||||    
T  33454180 aaaatttaatcttcggatactttcctgatacgtatcgagaagtatctgacatatatcagtgcaggatacgcaggggatacgatacgtcatccattttgaa 33454081  T
Q  244 gtatcggggtttcaca 259  Q
     |||||||| ||||||    
T  33454080 atatcggggcttcaca 33454065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 262
Target Start/End: Complemental strand, 19510633 - 19510515
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||| ||  |||| ||||  ||||||||||||| ||||| | | | ||||| |||  |||||||||| |||||| |||||||    
T  19510633 aaaatttaatatttggatactcacccgatacatatcaggaagtatcgggcatgtatcagtgcatgatacacaggggatacgatacgtcatccattttgaa 19510534  T
Q  244 gtatcggggtttcacaact 262  Q
    |||||||||||||||||||    
T  19510533 gtatcggggtttcacaact 19510515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 35159975 - 35159869
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||||| |||||||||| |||||||  | || ||||||| | || ||| ||||  ||||||||||||||||| |||||||    
T  35159975 aaaatttaatcttcggatactctcctgatacgtatcgggaagtattagacaagtatcggtgcagaatatgcaggggatacgatacatcatccattttgaa 35159876  T
Q  244 gtatcgg 250  Q
    |||||||    
T  35159875 gtatcgg 35159869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 35160140 - 35160077
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||||||| |||||||| ||||    
T  35160140 caaaaaagaagcactatct--aaaaaagaacacatcagtactcaagagttaaattattttaattaa 35160077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 47238075 - 47238116
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtact 47  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  47238075 caaaaaagaagcactatatccaaaaaagaacacatcagtact 47238116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 1400106 - 1400170
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||| |||||||| ||||||| ||||||||| |||| |||||||||||||||||| ||||    
T  1400106 aaaaaagaaacactatattcaaaaaataacacatcaatacttaagagttaagttattttaattaa 1400170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 36661258 - 36661208
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  36661258 caaaaaagaagcactgtatccaaaaaagaacacatcagtact-aagagttaa 36661208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 47719952 - 47719990
Alignment:
Q  33 gaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||||||||||||||||||||||    
T  47719952 gaacacatcagtactcaagagttaagttattttagttaa 47719990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 38064703 - 38064590
Alignment:
Q  147 aatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagt 245  Q
    |||||||| |||| |||||||||| ||||||||||  ||||||||| |||||||| | | | ||||||||  ||||||| ||  |||||| |||| ||||    
T  38064703 aatttaatcttcggatactctcctgatacgtatcggaaagtatcggtcaggtatcagtgcatgatacgcatgagatacgttatgtcatccattttaaagt 38064604  T
Q  246 atcggggtttcaca 259  Q
    ||||||| ||||||    
T  38064603 atcggggcttcaca 38064590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 47238654 - 47238727
Alignment:
Q  187 tatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    ||||||||||||||||| | |  ||||||||  ||||||||||||||||| |||||||||||||||| ||||||    
T  47238654 tatcgggcaggtatcggtgcaatatacgcaggggatacgatacatcatccattttgaagtatcggggcttcaca 47238727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 9250149 - 9250212
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||| |||||||||||| |||||||| ||||| | |||||||||||||| |||||||||||||    
T  9250149 aaaaaataagcactatatcaaaaaaaga-cacataattactcaagagttaaattattttagttaa 9250212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 161 - 252
Target Start/End: Original strand, 23079061 - 23079153
Alignment:
Q  161 atactctcctcatacgtatcgagaagtatcgggcaggtatcg-ggtaggatacgcagaagatacgatacatcatccgttttgaagtatcgggg 252  Q
    |||||||||| |||||||||| ||||||||||| ||||||||    |||||||||||  |||||| ||  |||||| ||||||||||||||||    
T  23079061 atactctcctgatacgtatcgggaagtatcgggtaggtatcgatccaggatacgcaggggatacggtatgtcatccattttgaagtatcgggg 23079153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 260
Target Start/End: Original strand, 44960140 - 44960256
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| || | ||||||| || |||| ||||| |||||||| | ||||| || | | |||||||||||  |||||||||| |||||| |||||||    
T  44960140 aaaatttaatctttggatactcttctgatacatatcgggaagtatcagacaggtgtcagtgcaggatacgcaggggatacgatacgtcatccattttgaa 44960239  T
Q  244 gtatcggggtttcacaa 260  Q
    ||||||| | |||||||    
T  44960240 gtatcggagcttcacaa 44960256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 11830482 - 11830432
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    ||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  11830482 caaaaaagaagcattatatccaaaaaagaacacgtcagtact-aagagttaa 11830432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 21409501 - 21409398
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| || | |||||||||| |||||||||| || ||||| |||||||||| | | ||||||  ||| ||||||||||| |||||| |||| ||    
T  21409501 aaaatttaatctttggatactctcctgatacgtatcgggatgtatcaggcaggtatcagtgcaggatatacaggagatacgatacgtcatccatttttaa 21409402  T
Q  244 gtat 247  Q
    ||||    
T  21409401 gtat 21409398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 1363017 - 1363062
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatc 190  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||||    
T  1363017 aaaatttcatattcggatactctcctgatacgtatcgagaagtatc 1363062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 38064947 - 38064881
Alignment:
Q  7 aaaaaagaagcactatatccaaa----aaagaacacatcagtactcaagagttaagttattttagtt 69  Q
    ||||||||||||||||||||| |    ||| ||||||| ||||||||| ||||||||||||||||||    
T  38064947 aaaaaagaagcactatatccacacacaaaaaaacacattagtactcaaaagttaagttattttagtt 38064881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 257
Target Start/End: Original strand, 15878410 - 15878462
Alignment:
Q  205 taggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttca 257  Q
    ||||||||| ||  |||||| ||||||||||||||||||||||||||| ||||    
T  15878410 taggatacgtaggggatacggtacatcatccgttttgaagtatcggggcttca 15878462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 16851097 - 16851046
Alignment:
Q  6 caaaaaagaagcactatatccaa-aaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  16851097 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 16851046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 27354235 - 27354184
Alignment:
Q  6 caaaaaagaagcactatatccaa-aaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  27354235 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 27354184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 27555170 - 27555221
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  27555170 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 27555221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 48163722 - 48163671
Alignment:
Q  6 caaaaaagaagcactatatccaa-aaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  48163722 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 48163671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 16850896 - 16850781
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||||| |  ||||||||||  |||||||||||| ||||||| | | ||||| |||   ||||| ||| |||||| |||||||    
T  16850896 aaaatttaatatttggatactcttcagatacgtatcggaaagtatcgggcaagtatcggtgcatgatacacagggaatacggtacgtcatccattttgaa 16850797  T
Q  244 gtatcggggtttcaca 259  Q
     |||||||| ||||||    
T  16850796 atatcggggcttcaca 16850781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 36202824 - 36202891
Alignment:
Q  186 gtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcgggg 252  Q
    |||||||||||| ||||| | |||||||||||  |||||| ||| |||||| ||||||||||||||||    
T  36202824 gtatcgggcaggcatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtatcgggg 36202891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 42897050 - 42896995
Alignment:
Q  206 aggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcacaac 261  Q
    |||||||||||  |||||| ||| |||||| |||||||||||||||| ||||||||    
T  42897050 aggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcacaac 42896995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 8028807 - 8028749
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg 203  Q
    ||||||||||||| | |||||||||  |||||||||  |||||||||||| ||||||||    
T  8028807 aaaatttaatatttggatactctcccgatacgtatcaggaagtatcgggccggtatcgg 8028749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 23970059 - 23970096
Alignment:
Q  96 ggtgcgggataattattggatactctcctgatacgtat 133  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  23970059 ggtgcaggataattatcggatactctcctgatacgtat 23970096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 39520848 - 39520795
Alignment:
Q  206 aggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||||||||  |||||| ||| |||||| |||||||||||||||| ||||||    
T  39520848 aggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 39520795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 40096452 - 40096401
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaa-gaacacatcagtactcaagagttaa 57  Q
    ||||||| || |||||||||||||||| ||||||||||||||| |||||||||    
T  40096452 caaaaaaaaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 40096401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 6e-28; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 33324931 - 33324816
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| |||||||||| |||||||    
T  33324931 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacatcatccattttgaa 33324832  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  33324831 gtatcggggcttcaca 33324816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 7876827 - 7876712
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  7876827 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 7876728  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  7876727 gtatcggggcttcaca 7876712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 38602327 - 38602442
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  38602327 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 38602426  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  38602427 gtatcggggcttcaca 38602442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 31236024 - 31236088
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  31236024 aaaaaagaagcactatatccaaaaaaaaacacatcagtactgaagagttaagttattttagttaa 31236088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 28746657 - 28746772
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||| ||||| |||| ||||||| || ||||||||||| |||||||||||||||||||| | |||||||||||  |||||||||| ||| || |||||||    
T  28746657 aaaaattaatcttcggatactcttctgatacgtatcgaaaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcaaccattttgaa 28746756  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  28746757 gtatcggggcttcaca 28746772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 4170507 - 4170622
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| |||||||| |||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  4170507 aaaatttaatatttggatactctccggatacgtatcgggaagtatcaggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 4170606  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||| | ||||||    
T  4170607 gtatcggagcttcaca 4170622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 16561913 - 16561798
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | || |||||||   |||||| ||| |||||| |||||||    
T  16561913 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcagaatacgcaagggatacggtacgtcatccattttgaa 16561814  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  16561813 gtatcggggcttcaca 16561798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 40308902 - 40309017
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | ||||||||||   |||||| ||| |||||  |||||||    
T  40308902 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcatgggatacggtacgtcatctattttgaa 40309001  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  40309002 gtatcggggcttcaca 40309017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 34146293 - 34146187
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| || | |||||||||| |||||||||| |||||||| ||||| |||||| | || |||||||||||||||||||| |||||| |||| ||    
T  34146293 aaaatttaatctttggatactctcctgatacgtatcgggaagtatcaggcagatatcggtgcagaatacgcagaagatacgatacgtcatccattttaaa 34146194  T
Q  244 gtatcgg 250  Q
    |||||||    
T  34146193 gtatcgg 34146187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 3545425 - 3545482
Alignment:
Q  14 aagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  3545425 aagcactatatccaaaaaagaacacatcagtactcaagaattaagttattttaattaa 3545482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 10573775 - 10573710
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||    
T  10573775 caaaaaataagcactatatccaaaaaagaacacatcactactcaatagttaagttattttggttaa 10573710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 35996756 - 35996651
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| ||||||||||||||| ||||||||||| ||||||||  |||||||||| | | |||||||||  ||||| ||||||||| | |||||||    
T  35996756 aaaatttaatcttcgaatactctcctgatacgtatcgaaaagtatcgaacaggtatcggtgcaagatacgcaggggatacaatacatcattcattttgaa 35996657  T
Q  244 gtatcg 249  Q
    ||||||    
T  35996656 gtatcg 35996651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 18301085 - 18300970
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  ||||||||||||||||||| | |||||||||| | || |||| |||  |||||||||| |||||| |||||||    
T  18301085 aaaatttaatatttggatactctcccgatacgtatcgagaagtatcagacaggtatcggtgcagaatacacaggggatacgatacgtcatccattttgaa 18300986  T
Q  244 gtatcggggtttcaca 259  Q
    ||||| ||| ||||||    
T  18300985 gtatcagggcttcaca 18300970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 145 - 258
Target Start/End: Complemental strand, 2319388 - 2319274
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || |||||||||  ||||||||  ||| ||||||| | | |||||||||  |||||||||| |||||| |||||||    
T  2319388 aaaatttaatcttcggatactcttctgatacgtatcaggaagtatcaagcaagtatcggtgcaagatacgcaggggatacgatacgtcatccattttgaa 2319289  T
Q  244 gtatcggggtttcac 258  Q
    |||||||||||||||    
T  2319288 gtatcggggtttcac 2319274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 2319556 - 2319491
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||||| |||| ||  ||||||||||||| ||||||||||||||||||||    
T  2319556 caaaaaagaagcactatatccataaaaaaatgcatcagtactcaatagttaagttattttagttaa 2319491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 261
Target Start/End: Original strand, 6497654 - 6497771
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| |||| ||| | |||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  6497654 aaaatttaatatttggatactctccggatacgtatcgggaagaatcagacaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 6497753  T
Q  244 gtatcggggtttcacaac 261  Q
    ||||||||  ||||||||    
T  6497754 gtatcgggacttcacaac 6497771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 22484380 - 22484267
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcg-ggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| |||||||||| ||| |||||  | |||||||||||   ||||| |||||||||| |||||||    
T  22484380 aaaatttaatatttggatactctccggatacgtatcgggaagtatcggacagatatcgatgcaggatacgcagggaatacggtacatcatccattttgaa 22484281  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  22484280 gtatcggggcttca 22484267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 22571050 - 22570937
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||| ||  |||||||||  ||||||||||||||||||||| | |||||||||||| |||||| ||| |||||  |||||||    
T  22571050 aaaatttaatatttggatactccccggatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcagaggatacggtacgtcatctattttgaa 22570951  T
Q  244 gtatcggggtttca 257  Q
    ||||| ||| ||||    
T  22570950 gtatctgggcttca 22570937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 34146460 - 34146396
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||| ||||| |||||||||||||||||| |||| |||||||||||||| |||||||||||||    
T  34146460 aaaaaataagcattatatccaaaaaagaacaaatcaatactcaagagttaaattattttagttaa 34146396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 35342597 - 35342534
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||| ||||||||  ||||||||||||||||||| |||||||||||||||||||||||||    
T  35342597 aaaaaagaaacactatatt-aaaaaagaacacatcagtaatcaagagttaagttattttagttaa 35342534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 45159014 - 45159078
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||||| | |||||||||||||    
T  45159014 aaaaaagaagcactatatcgaaaaaagaacacataagtactgaagagttgaattattttagttaa 45159078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 6496996 - 6497046
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6496996 caaaaaagaagcactatatccaaaaaagaacacatcagtact-aagagttaa 6497046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 7807379 - 7807494
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgggt-aggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||| |||  |||||||||| |||||||||  ||||||||||   | |||||||||  |||||||||| |||||| |||||||    
T  7807379 aaaatttaatatttggatactttccggatacgtatcgggaagtatcgaacaggtatcggtacaagatacgcaggggatacgatacgtcatccattttgaa 7807478  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  7807479 gtatcggggcttcaca 7807494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 24585626 - 24585525
Alignment:
Q  161 atactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||| ||||| |||||||||  |||||||| | |||||||||| | |||||||||||  ||||||||||||||||| |||||||||||||||| |||| |    
T  24585626 atacactcctgatacgtatctggaagtatcagacaggtatcggtgcaggatacgcagg-gatacgatacatcatccattttgaagtatcggggcttcaga 24585528  T
Q  260 act 262  Q
    |||    
T  24585527 act 24585525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 3545586 - 3545691
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| || ||||||| |||| |||||||||||||| | || ||||||| | || ||||| | |||||||||||| |||||| |||||||    
T  3545586 aaaatttaatcttcggatgctctcctgatacatatcgagaagtatcagacaagtatcggtgcagaatacgtaaaagatacgatacgtcatccattttgaa 3545685  T
Q  244 gtatcg 249  Q
    ||||||    
T  3545686 gtatcg 3545691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 249
Target Start/End: Complemental strand, 4355438 - 4355333
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| || | |||||||||| |||||||||| ||||||||  ||||||||||| | || ||||||||   ||||||||| |||||| |||||||    
T  4355438 aaaatttaatctttgcatactctcctgatacgtatcgggaagtatcaagcaggtatcggtgcagaatacgcagggaatacgatacgtcatccattttgaa 4355339  T
Q  244 gtatcg 249  Q
    ||||||    
T  4355338 gtatcg 4355333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 44156710 - 44156597
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||||| |||||||||| |||||||| | || ||||||  | | |||||||||  |||||||||  |||||| |||||||    
T  44156710 aaaatttaatcttcggatactctcctgatacgtatcgggaagtatcagacatgtatcgatgcatgatacgcaggggatacgatatgtcatccattttgaa 44156611  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  44156610 gtatcggggattca 44156597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 248
Target Start/End: Complemental strand, 1005625 - 1005522
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||  ||||||| || |||||||||| |||||||||  |||||||||| | |||||||||||  |||||||||| |||||| |||||||    
T  1005625 aaaatttaatcttcagatactcttctaatacgtatcgggaagtatcga-caggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaa 1005527  T
Q  244 gtatc 248  Q
    |||||    
T  1005526 gtatc 1005522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 1776441 - 1776556
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || ||||||||||  ||  |||||||||||||||| | || |||||||   |||||||||| ||| || |||||||    
T  1776441 aaaatttaatcttcggatactcttctgatacgtatcggaaatgatcgggcaggtatcggtgcagaatacgcaagggatacgatacgtcaaccattttgaa 1776540  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  1776541 gtatcggggcttcaca 1776556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 4561901 - 4561798
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || ||| |||||| ||||||||||||||||||||| | ||||||| ||    ||||||||| |||||| |||||||    
T  4561901 aaaatttaatcttcggatactcttctgatatgtatcgggaagtatcgggcaggtatcggtgcaggatacacaaggaatacgatacgtcatccattttgaa 4561802  T
Q  244 gtat 247  Q
    ||||    
T  4561801 gtat 4561798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 6124286 - 6124171
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||  |||||||||| || ||||||| | ||||||| |||  ||||| |||| |||||| |||| ||    
T  6124286 aaaatttaatatttggatactctccggatacgtatcaggaagtatcggacatgtatcggtgcaggatacacaggggatacaatacgtcatccattttaaa 6124187  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  6124186 gtatcggggcttcaca 6124171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 251
Target Start/End: Original strand, 8482922 - 8483029
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || ||||||||||  ||||||| | ||| |||||| | |||||||||| | |||||||||| |||| | |||||||    
T  8482922 aaaatttaatcttcggatactcttctgatacgtatcggaaagtatcagacagatatcggtgcaggatacgcaaaggatacgatacgtcattcattttgaa 8483021  T
Q  244 gtatcggg 251  Q
    ||||||||    
T  8483022 gtatcggg 8483029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 21104765 - 21104698
Alignment:
Q  5 acaaaaaagaagcactatatccaaaaaa-gaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||| |||||||||||| ||||||| | |||||||| ||||||| ||||||||||||||||||||    
T  21104765 acaaaaatgaagcactatattcaaaaaaagtacacatcaatactcaaaagttaagttattttagttaa 21104698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 251
Target Start/End: Complemental strand, 35342430 - 35342323
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||  | |||||||||| |||||||| || ||||||||| | ||||||||||   |||||| ||| |||||| |||||||    
T  35342430 aaaatttaatcttcggatactcttttgatacgtatcgggaagtatcaggtaggtatcggtgcaggatacgcaagggatacggtacgtcatccattttgaa 35342331  T
Q  244 gtatcggg 251  Q
    ||||||||    
T  35342330 gtatcggg 35342323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 12206138 - 12206036
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcg-ggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| ||||||||||||||| |||||||| || || |||| |||||||||||  | | ||||| |||| |||||||||| |||||| |||| ||    
T  12206138 aaaatttaatcttcgaatactctcctgatacgtattgaaaaatatcaggcaggtatcgatgcaagatacacagatgatacgatacgtcatccattttaaa 12206039  T
Q  244 gta 246  Q
    |||    
T  12206038 gta 12206036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 31236191 - 31236306
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||||| |||||||||| ||| ||||  |||||| | || | |||||||||||  ||||| |||| | |||| |||| ||    
T  31236191 aaaatttaatcttcggatactctcctgatacgtatcgggaaatatcatgcaggtgtgggtgcaggatacgcaggggatacaatacgttatccattttaaa 31236290  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  31236291 gtatcggggcttcaca 31236306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 20536847 - 20536773
Alignment:
Q  186 gtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||||||| ||||||| | |||||| ||||  |||||||||| |||||| |||||||||||||||| ||||||    
T  20536847 gtatcgggcaagtatcggtgcaggatatgcaggggatacgatacgtcatccattttgaagtatcggggcttcaca 20536773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 9293366 - 9293321
Alignment:
Q  26 caaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||| |||||||| |||| |||||||||||||||    
T  9293366 caaaaaagaacacatcggtactcaatagttgagttattttagttaa 9293321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 186 - 259
Target Start/End: Complemental strand, 12819372 - 12819299
Alignment:
Q  186 gtatcgggcaggtatcgggtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||||||||||||  || ||||||| |||  |||||| |||||||||| |||||||||||| ||| ||||||    
T  12819372 gtatcgggcaggtatatggcaggatacacaggggatacggtacatcatccattttgaagtatcagggcttcaca 12819299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 7807180 - 7807231
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  7807180 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 7807231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 22485062 - 22485011
Alignment:
Q  6 caaaaaagaagcactatatccaa-aaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  22485062 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 22485011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 37134303 - 37134407
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||  |||||||| | |||||||||| ||||||||  |||| |||| | | |||||||||||| |||||| ||| |||||  |||||||    
T  37134303 aaaatttaatcttcatatactctcttgatacgtatcgggaagtatcaagcagatatcagtgcaggatacgcagaggatacggtacgtcatctattttgaa 37134402  T
Q  244 gtatc 248  Q
    |||||    
T  37134403 gtatc 37134407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 40308161 - 40308212
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  40308161 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 40308212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 14824324 - 14824287
Alignment:
Q  96 ggtgcgggataattattggatactctcctgatacgtat 133  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  14824324 ggtgcaggataattatcggatactctcctgatacgtat 14824287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 4169845 - 4169896
Alignment:
Q  6 caaaaaagaagcactatatccaaaa-aagaacacatcagtactcaagagttaa 57  Q
    |||||| |||||| ||||||||||| ||||||||||||||||| |||||||||    
T  4169845 caaaaatgaagcattatatccaaaaaaagaacacatcagtact-aagagttaa 4169896  T

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Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 14217084 - 14217120
Alignment:
Q  97 gtgcgggataattattggatactctcctgatacgtat 133  Q
    |||| |||||||||| |||||||||||||||||||||    
T  14217084 gtgcaggataattatcggatactctcctgatacgtat 14217120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 45159378 - 45159418
Alignment:
Q  219 gatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||||||| |||||| |||||||||||||||| ||||||    
T  45159378 gatacgatacgtcatccattttgaagtatcggggcttcaca 45159418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 13353032 - 13353097
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13353032 caaaaaagaagcactatatcaaaaaaagaacacatcagtactcaagagttaagttattttagttaa 13353097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 30787398 - 30787463
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30787398 caaaaaagaagcactatatccaaaaaataacacatcagtactcaagagttaagttattttagttaa 30787463  T

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Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 35389863 - 35389746
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  35389863 aaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 35389764  T
Q  244 gtatcggggtttcacaac 261  Q
    ||||||||| ||||||||    
T  35389763 gtatcggggcttcacaac 35389746  T

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Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 13748452 - 13748565
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || ||||||||||  |||||||||||||||||||| | |||||||||||| |||||||||| ||| || |||||||    
T  13748452 aaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcagaggatacgatacgtcaaccattttgaa 13748551  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  13748552 gtatcggggcttca 13748565  T

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Target: chr3; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 2567107 - 2567171
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2567107 aaaaaggaagcactatatcgaaaaaagaacacatcagtactcaagagttaagttattttagttaa 2567171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 7327825 - 7327710
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||| |||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  7327825 aaaatttaatatttggatactatccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 7327726  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  7327725 gtatcggggcttcaca 7327710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 40497443 - 40497328
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||| ||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  40497443 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaagtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 40497344  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  40497343 gtatcggggcttcaca 40497328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 52121293 - 52121178
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggta-tcgggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  ||||||||||||||||||||| |||||| | | | |||||||||||  |||||||||| |||||| |||||||    
T  52121293 aaaatttaatatttggatactctcccgatacgtatcgagaagtatcggacaggtattagtgcaggatacgcaggggatacgatacgtcatccattttgaa 52121194  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  52121193 gtatcggggcttcaca 52121178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 52684314 - 52684208
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||||| |||||||||| ||||||||||  ||||||||| |||||||||| | ||||||||||  ||||||||||| |||||  |||||||    
T  52684314 aaaatttaatattcggatactctcctaatacgtatcggaaagtatcggacaggtatcggtgcaggatacgcatgagatacgatacgtcatctattttgaa 52684215  T
Q  244 gtatcgg 250  Q
    |||||||    
T  52684214 gtatcgg 52684208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 983467 - 983402
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  983467 caaaaaagaaacactatatccaaaaaagaacacataagtactcaagagttaagttgttttagttaa 983402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 19421697 - 19421632
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||    
T  19421697 caaaaaagaagcactatatccaaaaaagaatacatcagtgctcaagagttaagttattttggttaa 19421632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 19878939 - 19879004
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  19878939 caaaaaagaaacattatatcaaaaaaagaacacatcagtactcaagagttaagttattttagttaa 19879004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 45057138 - 45057203
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45057138 caaaaaataagcattatatccaaaaaagaacacattagtactcaagagttaagttattttagttaa 45057203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 55268853 - 55268918
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  55268853 caaaaaagaagaactatatccaaaaaataacacatcagtactcaagacttaagttattttagttaa 55268918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 28968791 - 28968727
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  28968791 aaaaaagaaacactatattcaaaaaagaacacatcattactcaagagttaagttattttagttaa 28968727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 47642286 - 47642222
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47642286 aaaaaagaaacgctatattcaaaaaagaacacatcagtactcaagagttaagttattttagttaa 47642222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 1679703 - 1679818
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||| ||||  |||||| ||| | |||| |||||||    
T  1679703 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatatgcagtggatacggtacgttatccattttgaa 1679802  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  1679803 gtatcggggcttcaca 1679818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 42464912 - 42465027
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||| |||||||| | ||||||| |  |||||||||| ||||||||||||||||||||| | |||||||||||| |||||  ||| |||||| |||||||    
T  42464912 aaaaattaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcagaggatacagtacgtcatccattttgaa 42465011  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  42465012 gtatcggggcttcaca 42465027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 38888922 - 38888988
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaa-cacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  38888922 caaaaaataagcactatatccaaaaaagaaacacaccagtactcaagagttaagttattttagttaa 38888988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 28968623 - 28968515
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || |||||||||| ||||||||||||||||||||| | |||||||| | | |||| | ||| |||||| |||||||    
T  28968623 aaaatttaatcttcggatactcttctgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgtaaaggatatggtacgtcatccattttgaa 28968524  T
Q  244 gtatcgggg 252  Q
    |||||||||    
T  28968523 gtatcgggg 28968515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 52684607 - 52684543
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||||||||    
T  52684607 aaaaaagaagcactatatcgaaaaaagaacacattagtactcaatagttgagttattttagttaa 52684543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 6134222 - 6134281
Alignment:
Q  9 aaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagt 68  Q
    |||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  6134222 aaaagaagcattatatccataaaaaaacacatcagtactcaagagttaagttattttagt 6134281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 7899562 - 7899620
Alignment:
Q  12 agaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  7899562 agaagcactatatt-aaaaaagaacacatcagtactcaagagttaagttattttagttaa 7899620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 251
Target Start/End: Original strand, 25937069 - 25937176
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||||||   |||||||||  ||||||||||  |||||||||||| |||| || ||||||||||||| ||||||||||| |||||| |||| ||    
T  25937069 aaaatttaatatttagatactctccagatacgtatcggaaagtatcgggcatgtattggtgtaggatacgcaggagatacgatacgtcatccattttaaa 25937168  T
Q  244 gtatcggg 251  Q
    ||||||||    
T  25937169 gtatcggg 25937176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 30226533 - 30226430
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||| | |||||||||   |||||||||||||||||||| | |||||||||||| |||||||||  |||||| |||||||    
T  30226533 aaaatttaatcttcggatactctcttgatacgtatcagaaagtatcgggcaggtatcggtgcaggatacgcagaggatacgataagtcatccattttgaa 30226434  T
Q  244 gtat 247  Q
    ||||    
T  30226433 gtat 30226430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 37996816 - 37996931
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||| |||||||||||| |||| | |||||||||||  |||||| ||| |||||| |||| ||    
T  37996816 aaaatttaatatttggatactctccggatacgtatcgggaaatatcgggcaggtctcggtgcaggatacgcaggggatacggtacgtcatccattttaaa 37996915  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  37996916 gtatcggggcttcaca 37996931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 20509993 - 20510055
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagt 68  Q
    |||||||||||||||||||||| ||||||| |||||| || ||||||||||||||||||||||    
T  20509993 caaaaaagaagcactatatccataaaagaatacatcactattcaagagttaagttattttagt 20510055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 55269021 - 55269132
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||||| |||||||||| ||||||||    ||||||||  | |||||||||||  |||||||||| |||||| |||||||    
T  55269021 aaaatttaatcttcggatactctcctgatacgtatcgggaagtatc----aggtatcgatgcaggatacgcaggggatacgatacgtcatccattttgaa 55269116  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  55269117 gtatcggggcttcaca 55269132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 21157566 - 21157631
Alignment:
Q  7 aaaaaagaagcactatatccaaaa-aagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||| ||||    
T  21157566 aaaaaagaagcactatatccaaaaaaagaacacatcaatactcgagagttaagttattttaattaa 21157631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 22289726 - 22289831
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||||| |||||||||  ||||||||  |||||||| || | |||||||||||  |||||||||| |||||| |||||||    
T  22289726 aaaatttaatcttcggatactctcctgatacgtatcaggaagtatcatgcaggtattggtgcaggatacgcaggggatacgatacgtcatccattttgaa 22289825  T
Q  244 gtatcg 249  Q
    ||||||    
T  22289826 gtatcg 22289831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 262
Target Start/End: Complemental strand, 2122820 - 2122699
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaag---atacgatacatcatccgtttt 240  Q
    |||||||||| |||| || ||||||| |||||||||| |||||||| |||| ||||||| | | ||||||||| ||   |||| |||| |||||| ||||    
T  2122820 aaaatttaatcttcggattctctcctgatacgtatcgggaagtatcaggcaagtatcggtgcatgatacgcaggaggggatacaatacgtcatccatttt 2122721  T
Q  241 gaagtatcggggtttcacaact 262  Q
    |||||||||||| |||||||||    
T  2122720 gaagtatcggggcttcacaact 2122699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 22610600 - 22610650
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22610600 caaaaaagaagcactatatccaaaaaagaacacatcagtact-aagagttaa 22610650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 25936402 - 25936452
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25936402 caaaaaagaagcactatatccaaaaaagaacacatcagtact-aagagttaa 25936452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 41742077 - 41742192
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||||  ||| |||||| |||||||| || ||||||||| | ||||||| |||| ||||| |||| |||||| |||||||    
T  41742077 aaaatttaatcttcggatactctccagatatgtatcgggaagtatcaggaaggtatcggtgcaggatacacagaggatacaatacgtcatccattttgaa 41742176  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||| | ||||||    
T  41742177 gtatcggcgcttcaca 41742192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 45532386 - 45532436
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45532386 caaaaaagaagcactatatccaaaaaagaacacatcagtact-aagagttaa 45532436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 212786 - 212724
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagtt 69  Q
    |||||||||||| | ||||||||||||||||||||| |||||||||||||| | |||||||||    
T  212786 aaaaaagaagcattttatccaaaaaagaacacatcaatactcaagagttaaataattttagtt 212724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 257
Target Start/End: Original strand, 6134390 - 6134500
Alignment:
Q  148 atttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagta 246  Q
    ||||||| |||| |||||||||| |||| ||||| |||||||| || | ||||||| | |||||||||||  |||||||||| |||||| ||||||||||    
T  6134390 atttaatcttcggatactctcctgatacatatcgggaagtatcaggtatgtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaagta 6134489  T
Q  247 tcggggtttca 257  Q
    || ||| ||||    
T  6134490 tcagggcttca 6134500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 48122938 - 48122825
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||||||   |||||||||| ||| ||||||||| ||||||| | |||||| ||||  |||||| ||| |||||| |||||||    
T  48122938 aaaatttaatatttggatactctctggatacgtatcgggaaatatcgggcatgtatcggtgcaggatatgcaggggatacggtacgtcatccattttgaa 48122839  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  48122838 gtatcggggcttca 48122825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 21006201 - 21006265
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||| |||||| |||||||||||||||  ||||||| ||||||||||||||| ||||    
T  21006201 aaaaaagaagcattatatcgaaaaaagaacacatcgatactcaatagttaagttattttatttaa 21006265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 25700873 - 25700760
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||||| ||||||||   |||||||| |||||||||||| | |||||||||||| ||||| ||| |||||||   |||||    
T  25700873 aaaatttaatcttcggatactctcctgatacgtattaggaagtatcaggcaggtatcggtgcaggatacgcagaggatacaatatatcatcc--attgaa 25700776  T
Q  244 gtatcggggtttcaca 259  Q
    |||||| || ||||||    
T  25700775 gtatcgaggcttcaca 25700760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 30787567 - 30787682
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatc-gggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||||| |||||||||||||||| ||   || ||||| |   |||||||||||  |||||||||| |||||  |||||||    
T  30787567 aaaatttaatcttcggatactctcctgatacgtatcgagaagtgtcaaacaagtatcagtacaggatacgcaggggatacgatacgtcatcgattttgaa 30787666  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  30787667 gtatcggggcttcaca 30787682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 38889085 - 38889199
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||| ||||| ||||||||||||||| ||||||||||  || |||| ||||| |||||| | ||||| || ||| |||||||||| |||||| |||||||    
T  38889085 aaaaattaatcttcgaatactctcctgatacgtatcggaaattatcaggcagatatcggtgcaggat-cgtagaggatacgatacgtcatccattttgaa 38889183  T
Q  244 gtatcggggtttcaca 259  Q
    ||||| ||| ||||||    
T  38889184 gtatcagggcttcaca 38889199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 42229787 - 42229684
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || |||||||||  ||||||||||||||||||||| | |||||||||||  ||||  |||| |||||  |||||||    
T  42229787 aaaatttaattttcggatactcttctgatacgtatcaggaagtatcgggcaggtatcggtgcaggatacgcaggggatataatacgtcatctattttgaa 42229688  T
Q  244 gtat 247  Q
    ||||    
T  42229687 gtat 42229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 52505838 - 52505952
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||||| |  |||||||||| ||| |||||||| |||||||| | |||||||||||  |||||  |||||||||| |||| ||    
T  52505838 aaaatttaatatttggatactcttcggatacgtatcgggaaatatcgggccggtatcggtgcaggatacgcag-ggatacagtacatcatccatttttaa 52505936  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  52505937 gtatcggggcttcaca 52505952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 250
Target Start/End: Original strand, 28882683 - 28882789
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  ||||||||||  ||||||||||||  |||||| | | |||||||||  |||||| ||| |||||| |||||||    
T  28882683 aaaatttaatatttggatactctcccgatacgtatcggaaagtatcgggcatatatcggtgcatgatacgcaggggatacggtacgtcatccattttgaa 28882782  T
Q  244 gtatcgg 250  Q
    |||||||    
T  28882783 gtatcgg 28882789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 29915958 - 29915856
Alignment:
Q  161 atactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    ||||| |||| |||||||||| |||||||| | |||||||||| | | |||||||||  |||||||||| |||||  |||||||||||||||  ||||||    
T  29915958 atactatcctgatacgtatcgggaagtatcagacaggtatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcgggacttcaca 29915859  T
Q  260 act 262  Q
    |||    
T  29915858 act 29915856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 262
Target Start/End: Complemental strand, 29965111 - 29965009
Alignment:
Q  161 atactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    ||||| |||| |||||||||| |||||||| | |||||||||| | | |||||||||  |||||||||| |||||  |||||||||||||||  ||||||    
T  29965111 atactatcctgatacgtatcgggaagtatcagacaggtatcggtgcatgatacgcaggggatacgatacgtcatctattttgaagtatcgggacttcaca 29965012  T
Q  260 act 262  Q
    |||    
T  29965011 act 29965009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 172 - 259
Target Start/End: Complemental strand, 22310791 - 22310703
Alignment:
Q  172 atacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||||||| |||||||| |||||||||||| | ||||||| |||  |||||| ||| |||||| || ||||||||||||| ||||||    
T  22310791 atacgtatcgggaagtatcaggcaggtatcggtgcaggatacacaggggatacggtacgtcatccattgtgaagtatcggggcttcaca 22310703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 28548308 - 28548260
Alignment:
Q  23 atccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||| |  |||||||||||||||||||||||||||    
T  28548308 atccaaaaaagaacacattaagactcaagagttaagttattttagttaa 28548260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 39664071 - 39663968
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||| ||||| |||||||||| | || ||||||||||  ||||||||| |||||||||| | ||||||||||||  |||  |||||||| || |||||||    
T  39664071 aaaaattaatcttcgaatactattctgatacgtatcggaaagtatcggacaggtatcggtgcaggatacgcagagaatagaatacatcaaccattttgaa 39663972  T
Q  244 gtat 247  Q
    ||||    
T  39663971 gtat 39663968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 22611420 - 22611494
Alignment:
Q  186 gtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||||||||||||||| | |||| ||||||  |||||| ||| |||||| |||||||||||||||| ||||||    
T  22611420 gtatcgggcaggtatcggtgcaggaaacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 22611494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 2567454 - 2567507
Alignment:
Q  206 aggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    ||||||||||| | ||||||||| |||||| ||||||||||||||| |||||||    
T  2567454 aggatacgcaggaaatacgatacgtcatccattttgaagtatcgggatttcaca 2567507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 25701021 - 25700980
Alignment:
Q  27 aaaaaagaacacatcagtactcaagagttaagttattttagt 68  Q
    |||||| ||||||| |||||||||||||||||||||||||||    
T  25701021 aaaaaaaaacacataagtactcaagagttaagttattttagt 25700980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 33240063 - 33240006
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcg 202  Q
    ||||| ||||||| | |||||||||  |||||||||| ||||||||||||||||||||    
T  33240063 aaaatataatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcg 33240006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 45532985 - 45533042
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcg 202  Q
    ||||||||||||| | ||||||| |  |||||||||| ||||||||||||||||||||    
T  45532985 aaaatttaatatttggatactcttcggatacgtatcgggaagtatcgggcaggtatcg 45533042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 1679004 - 1679055
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  1679004 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 1679055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 7328019 - 7327968
Alignment:
Q  6 caaaaaagaagcactatatccaa-aaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  7328019 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 7327968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 13353232 - 13353296
Alignment:
Q  186 gtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcg 249  Q
    ||||||||||| |||||| | ||||||||||| ||||||||||| |||||| |||| ||||||||    
T  13353232 gtatcgggcagatatcggcgcaggatacgcaggagatacgatacgtcatccattttaaagtatcg 13353296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 19420956 - 19420904
Alignment:
Q  206 aggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcac 258  Q
    |||||||||||  |||||||||| |||||| |||||||||||||||| |||||    
T  19420956 aggatacgcaggggatacgatacgtcatccattttgaagtatcggggcttcac 19420904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 37996614 - 37996665
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  37996614 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 37996665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 45347410 - 45347354
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatc 201  Q
    |||||||||| |||| ||||||| |  ||||||||||| ||||||||||||||||||    
T  45347410 aaaatttaatcttcggatactcttcggatacgtatcgaaaagtatcgggcaggtatc 45347354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 45057249 - 45057308
Alignment:
Q  157 tcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgca 215  Q
    |||||||||||| | |||||||||| ||||||||||||| ||||||| | ||||||||||    
T  45057249 tcgaatactctcatgatacgtatcgggaagtatcgggcaagtatcggtgcaggatacgca 45057308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 260
Target Start/End: Original strand, 19879140 - 19879214
Alignment:
Q  187 tatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcacaa 260  Q
    ||||||||||||||||| | |||||||||||  |||||| ||| |||||| ||||||||||| | || |||||||    
T  19879140 tatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaagtattgcggcttcacaa 19879214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 42229849 - 42229812
Alignment:
Q  96 ggtgcgggataattattggatactctcctgatacgtat 133  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  42229849 ggtgcaggataattatcggatactctcctgatacgtat 42229812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 25700945 - 25700909
Alignment:
Q  97 gtgcgggataattattggatactctcctgatacgtat 133  Q
    |||| |||||||||| |||||||||||||||||||||    
T  25700945 gtgcaggataattatcggatactctcctgatacgtat 25700909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 133
Target Start/End: Original strand, 41742006 - 41742042
Alignment:
Q  97 gtgcgggataattattggatactctcctgatacgtat 133  Q
    |||| |||||||||| |||||||||||||||||||||    
T  41742006 gtgcaggataattatcggatactctcctgatacgtat 41742042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 48123619 - 48123568
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaa-gaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||||||||| || |||||||||||| |||||||||    
T  48123619 caaaaaagaatcactatatccaaaaaatgaccacatcagtact-aagagttaa 48123568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 52505147 - 52505198
Alignment:
Q  6 caaaaaagaagcactatatccaaaa-aagaacacatcagtactcaagagttaa 57  Q
    |||||||||| || ||||||||||| ||||||||||||||||| |||||||||    
T  52505147 caaaaaagaatcattatatccaaaaaaagaacacatcagtact-aagagttaa 52505198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 53192570 - 53192498
Alignment:
Q  186 gtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttca 257  Q
    |||||||||||||||||| | ||||||| |||   ||||| ||| |||||| |||||||||||||||| ||||    
T  53192570 gtatcgggcaggtatcggtgcaggatactcagggtatacggtacgtcatccattttgaagtatcggggcttca 53192498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 24784652 - 24784588
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24784652 aaaaaagaagcactatatcgaaaaaagaacacatcagtactcaagagttaagttattttagttaa 24784588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 24823614 - 24823678
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24823614 aaaaaagaagcactatatcgaaaaaagaacacatcagtactcaagagttaagttattttagttaa 24823678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 52721634 - 52721570
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  52721634 aaaaaagaagcactatatcgaaaaaagaacacatcagtactcaagagttaagttattttagttaa 52721570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 19738810 - 19738702
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  19738810 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 19738711  T
Q  244 gtatcgggg 252  Q
    |||||||||    
T  19738710 gtatcgggg 19738702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 28377109 - 28376994
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||   |||||||||| |||||||||| ||||||||| | ||||||| ||| ||||||||||| |||||| |||||||    
T  28377109 aaaatttaatatttggatactctcccggtacgtatcgaaaagtatcgggtaggtatcggtgcaggatacacaggagatacgatacgtcatccattttgaa 28377010  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  28377009 gtatcggggcttcaca 28376994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 46431772 - 46431835
Alignment:
Q  8 aaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46431772 aaaaagaagtagtatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 46431835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 52122874 - 52122989
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||  ||| |||||| |||||||    
T  52122874 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaa 52122973  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  52122974 gtatcggggcttcaca 52122989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 5325726 - 5325839
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  ||||| |||| |||||| |||| ||    
T  5325726 aaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacaatacgtcatccattttaaa 5325825  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  5325826 gtatcggggcttca 5325839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 44521883 - 44521948
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  44521883 caaaaaagaagcattatattcaaaaaagaacacattagtactcaagagttaagttattttagttaa 44521948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 53322450 - 53322333
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||| || |||||| | | |||||||||| | |||||||||| |||||| |||||||    
T  53322450 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgagccggtatcagtgcaggatacgcaaaggatacgatacgtcatccattttgaa 53322351  T
Q  244 gtatcggggtttcacaac 261  Q
    ||||||||| ||||||||    
T  53322350 gtatcggggcttcacaac 53322333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 3109143 - 3109207
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  3109143 aaaaaagaaacactatattcaaaaaataacacatcagtactcaagagttaagttattttagttaa 3109207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 17892528 - 17892464
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  17892528 aaaaaagaaacactatattcaaaaaagaacacatcagtactcaagagttaagttatttttgttaa 17892464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 24793569 - 24793633
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  24793569 aaaaaagaaacactatatttaaaaaagaacacatcagtactcaagagttaagttattttagttaa 24793633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 36943949 - 36943885
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  36943949 aaaaaagaaacactatattcaaaaaagaacacatcactactcaagagttaagttattttagttaa 36943885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 39957968 - 39957904
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||    
T  39957968 aaaaaagaagcactatatcgaaaaaagaacacatcagtattcaagaattaagttattttagttaa 39957904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 5834943 - 5834828
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| |||| |||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  5834943 aaaatttaatatttggatactctcccgatacgtatcgggaagcatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 5834844  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||| | ||||||    
T  5834843 gtatcggagcttcaca 5834828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 55900985 - 55901047
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagt 68  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||    
T  55900985 caaaaaagaagcattatatccataaaagaacacatcagtactcaagagttaagtttttttagt 55901047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 8064114 - 8064227
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||||||   |||||||||  ||||||||||  |||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  8064114 aaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 8064213  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  8064214 gtatcggggcttca 8064227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 251
Target Start/End: Original strand, 46431938 - 46432045
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| || | |||||||| | |||||||||| |||||||| | |||||||||  | |||||| ||||| |||||||||| ||||||||||||||    
T  46431938 aaaatttaatctttggatactctcttgatacgtatcgggaagtatcagtcaggtatcgttgcaggatatgcagaggatacgatacgtcatccgttttgaa 46432037  T
Q  244 gtatcggg 251  Q
    ||||||||    
T  46432038 gtatcggg 46432045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 17892361 - 17892255
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || |||| ||||| ||||||||||||||||||||| ||| ||||||||  ||||||| ||| || ||| |||||||    
T  17892361 aaaatttaatcttcggatactcttctgatacatatcgggaagtatcgggcaggtatcggtgtatgatacgcatgagatacggtacgtcgtccattttgaa 17892262  T
Q  244 gtatcgg 250  Q
    |||||||    
T  17892261 gtatcgg 17892255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 47607222 - 47607108
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgggtaggatacgcagaagatacgatacatcatccgttttgaag 244  Q
    |||||||||| |||  || ||||||| |||||||||  ||| |||| ||||| ||||| | ||||||||||| ||||||||||  |||||| ||||||||    
T  47607222 aaaatttaatcttcagatgctctcctgatacgtatcaggaaatatcaggcagatatcgtgcaggatacgcaggagatacgatatgtcatccattttgaag 47607123  T
Q  245 tatcggggtttcaca 259  Q
    |||||||| ||||||    
T  47607122 tatcggggcttcaca 47607108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 40694183 - 40694070
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||  |||||||||| |||||||||| ||||||||   |||||||||| | || |||||||   ||||||||||||||||| |||||||    
T  40694183 aaaatttaatcttcagatactctcctgatacgtatcgggaagtatcaatcaggtatcggtgcagaatacgcatgggatacgatacatcatccattttgaa 40694084  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  40694083 gtatcggggcttca 40694070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 55901144 - 55901257
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||| | |||| |||||||||||||||||||||| | ||||||| | ||||||| |||  |||||||||| |||||  |||| ||    
T  55901144 aaaatttaatcttcggatattttcctgatacgtatcgagaagtatcgggtatgtatcggtgcaggatacacaggggatacgatacgtcatctattttaaa 55901243  T
Q  244 gtatcggggtttca 257  Q
    ||||||||||||||    
T  55901244 gtatcggggtttca 55901257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 252
Target Start/End: Complemental strand, 51858929 - 51858837
Alignment:
Q  161 atactctcctcatacgtatcgagaagtatcgggcaggtatcgggta-ggatacgcagaagatacgatacatcatccgttttgaagtatcgggg 252  Q
    |||||||||| |||||||||| |||||||| | ||||||||| | | |||||||||| ||||||||||| |||||| |||| |||||||||||    
T  51858929 atactctcctgatacgtatcgggaagtatcagacaggtatcgtgcaaggatacgcaggagatacgatacgtcatccattttaaagtatcgggg 51858837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 41145725 - 41145610
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcg-ggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  ||||||||||  ||||||||| |||||||||  | |||||||||||  |||||  ||| |||||| |||||||    
T  41145725 aaaatttaatatttggatactctccgaatacgtatcggaaagtatcggacaggtatcgatgcaggatacgcaggggatacagtacgtcatccattttgaa 41145626  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  41145625 gtatcggggcttcaca 41145610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 41146399 - 41146349
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41146399 caaaaaagaagcactatatccaaaaaagaacacatcagtact-aagagttaa 41146349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 52721377 - 52721274
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| |||||||| ||||| |||||| | |||||||||||  |||||||||| |||||  |||||||    
T  52721377 aaaatttaatatttggatactctccgaatacgtatcgggaagtatcaggcagatatcggtgcaggatacgcaggggatacgatacgtcatctattttgaa 52721278  T
Q  244 gtat 247  Q
    ||||    
T  52721277 gtat 52721274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 722467 - 722532
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||| |||||||| ||||||| ||||||||| ||| |||||||||||||| |||||||||    
T  722467 caaaaaagaaacactatattcaaaaaataacacatcaatacacaagagttaagttagtttagttaa 722532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 754451 - 754386
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||| |||||||| ||||||| ||||||||| ||| |||||||||||||| |||||||||    
T  754451 caaaaaagaaacactatattcaaaaaataacacatcaatacacaagagttaagttagtttagttaa 754386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 36511939 - 36512052
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || ||||||||||  |||||||||||| ||||||| | ||||||||||   ||||| |||| ||| || |||||||    
T  36511939 aaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaagtatcggcgcaggatacgcacgggatacaatacgtcaaccattttgaa 36512038  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  36512039 gtatcggggcttca 36512052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 44121885 - 44121950
Alignment:
Q  183 gaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtat 247  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||| || ||| |||||||||||    
T  44121885 gaagtatcgggcaggtatcggtgcaggatacgcagaagatacgatacgtcgtccattttgaagtat 44121950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 37992385 - 37992437
Alignment:
Q  20 tatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaat 72  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||||||||||    
T  37992385 tatatcaagaaaagaacacatcggtactcaagagttaagttattttagttaat 37992437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 259
Target Start/End: Complemental strand, 10257777 - 10257698
Alignment:
Q  181 gagaagtatcgggcaggtatcgggt-aggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    ||||||||||||||||||||||    || ||||||||  ||||||||||||||||| |||||||||||||||| ||||||    
T  10257777 gagaagtatcgggcaggtatcgatacagaatacgcagcggatacgatacatcatccattttgaagtatcggggcttcaca 10257698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 251
Target Start/End: Original strand, 42472574 - 42472681
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||| | ||||||||||||| ||||||| | |||||||||||   ||||  ||| |||||| |||||||    
T  42472574 aaaatttaatatttggatactctccggatacgtattgggaagtatcgggcaagtatcggtgcaggatacgcagggaatacagtacgtcatccattttgaa 42472673  T
Q  244 gtatcggg 251  Q
    ||||||||    
T  42472674 gtatcggg 42472681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 53323134 - 53323084
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  53323134 caaaaaagaagcactgtatccaaaaaagaacacatcagtact-aagagttaa 53323084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 27981994 - 27981905
Alignment:
Q  160 aatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatc 248  Q
    ||||||||| | ||||||||||| ||||||| | ||| |||||| | ||||| ||||| ||||||||||| |||||| ||||||||||||    
T  27981994 aatactctcttgatacgtatcgaaaagtatcagacagatatcggtggaggatgcgcaggagatacgatacgtcatccattttgaagtatc 27981905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 2586596 - 2586552
Alignment:
Q  27 aaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||||||| || |||||||||||||||||||||||    
T  2586596 aaaaaagaacacatcagtcctgaagagttaagttattttagttaa 2586552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 248
Target Start/End: Complemental strand, 4400581 - 4400477
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgggt-aggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||||  |||||||||| |||||||||| |||||||| | || ||||||| | | ||||| ||| |||||||||  ||||| | |||||||    
T  4400581 aaaatttaatattctgatactctcctgatacgtatcgggaagtatcagacaagtatcggttcatgatacacaggagatacgatttatcattcattttgaa 4400482  T
Q  244 gtatc 248  Q
    |||||    
T  4400481 gtatc 4400477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 39957677 - 39957630
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgg 192  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||||    
T  39957677 aaaatttaatattcggatactctccggatacgtatcgagaagtatcgg 39957630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 52572976 - 52572934
Alignment:
Q  14 aagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  52572976 aagcactatatccaaaaaagaacacatcagtact-aagagttaa 52572934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 149 - 257
Target Start/End: Complemental strand, 2586445 - 2586336
Alignment:
Q  149 tttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtat 247  Q
    |||||| |||| ||||||| || |||||||| |  ||||||||||||||| |||| | ||||||| |||  |||||| ||| |||||| |||| ||||||    
T  2586445 tttaatcttcggatactcttctgatacgtattggaaagtatcgggcaggtgtcggtgaaggatactcaggggatacggtacgtcatccattttaaagtat 2586346  T
Q  248 cggggtttca 257  Q
    ||||| ||||    
T  2586345 cggggcttca 2586336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 49470545 - 49470496
Alignment:
Q  22 tatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||||||   |||| ||||||||||||||||||||||||||||||    
T  49470545 tatccaaaaaagtttacatgagtactcaagagttaagttattttagttaa 49470496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 3402897 - 3402948
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  3402897 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 3402948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 8063420 - 8063471
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  8063420 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 8063471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 38492305 - 38492377
Alignment:
Q  186 gtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttca 257  Q
    |||||||||||||||||| | |||||||||||  |||||  ||| |||||| |||||||||||||||| ||||    
T  38492305 gtatcgggcaggtatcggtgcaggatacgcaggggatacagtacgtcatccattttgaagtatcggggcttca 38492377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 42630342 - 42630386
Alignment:
Q  27 aaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||    
T  42630342 aaaaaagaacacataagtactgaagagttcagttattttagttaa 42630386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 257
Target Start/End: Complemental strand, 1177083 - 1176981
Alignment:
Q  156 ttcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtt 254  Q
    |||| ||||||| || |||| |||||  ||||||||||||||||| || | |||||||| ||  |||||||||| ||| |  |||||||||||||||| |    
T  1177083 ttcggatactcttctgatacatatcggaaagtatcgggcaggtatgggtgcaggatacgtaggggatacgatacgtcaactattttgaagtatcggggct 1176984  T
Q  255 tca 257  Q
    |||    
T  1176983 tca 1176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 259
Target Start/End: Complemental strand, 14795074 - 14795021
Alignment:
Q  206 aggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||||||||  |||||| ||| |||||| |||||||||||||||| ||||||    
T  14795074 aggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 14795021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 134
Target Start/End: Complemental strand, 17892427 - 17892395
Alignment:
Q  102 ggataattattggatactctcctgatacgtatt 134  Q
    ||||||| |||||||||||||||||||||||||    
T  17892427 ggataatgattggatactctcctgatacgtatt 17892395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 97 - 133
Target Start/End: Complemental strand, 40694254 - 40694218
Alignment:
Q  97 gtgcgggataattattggatactctcctgatacgtat 133  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  40694254 gtgcaggataattattggatactctcctcatacgtat 40694218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 72
Target Start/End: Complemental strand, 40694313 - 40694285
Alignment:
Q  44 tactcaagagttaagttattttagttaat 72  Q
    |||||||||||||||||||||||||||||    
T  40694313 tactcaagagttaagttattttagttaat 40694285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 26327267 - 26327153
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| |||||||| | |||||||||| ||||||||||||||||||||| | ||||||| ||| ||||||||||| |||||| |||||||    
T  26327267 aaaatttaatcttcggatactctctt-atacgtatcgggaagtatcgggcaggtatcggtgcaggatacacaggagatacgatacgtcatccattttgaa 26327169  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  26327168 gtatcggggcttcaca 26327153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 3212849 - 3212785
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3212849 aaaaaataagcactatatcaaaaaaagaacacatcagtactcaagagttaagttattttagttaa 3212785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 7255202 - 7255069
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa-------tgaaaaatactggggcaagtatccggt 98  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||       || ||||||  |||||| |||| ||||    
T  7255202 caaaaaagaagcactatatcaaaaaaataacacatcagtactcaagagttaagttatttaagttaacattaattggaaaatatcggggcaggtat-cggt 7255104  T
Q  99 gcgggataattattggatactctcctgatacgtat 133  Q
    ||  |||| |||| |||||||||||||||||||||    
T  7255103 gcatgatacttatcggatactctcctgatacgtat 7255069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 31195874 - 31195977
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||||||| |||||| |||||||    
T  31195874 aaaatttaatatttggatactctccagatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaa 31195973  T
Q  244 gtat 247  Q
    ||||    
T  31195974 gtat 31195977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 31079880 - 31079750
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa----tgaaaaatactggggcaagtatccggtgcg 101  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    ||  |||||  || ||| |||| ||||||     
T  31079880 caaaaaagaaacactatatccaaaaaagaacacatcagtattcaagatttaagttattttagttaacaattgggaaatatcggagcaggtat-cggtgca 31079782  T
Q  102 ggataattattggatactctcctgatacgtat 133  Q
     |||||| || |||||||||||||||||||||    
T  31079781 tgataatcatcggatactctcctgatacgtat 31079750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 145 - 257
Target Start/End: Complemental strand, 234419 - 234306
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||| ||||| |||| ||||||| || ||||||||||  |||||||||||||||||||| | ||||||||||| ||||||||||| ||| || |||||||    
T  234419 aaaagttaatcttcggatactcttctgatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggagatacgatacgtcaaccattttgaa 234320  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  234319 gtatcggggcttca 234306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 134
Target Start/End: Original strand, 10894356 - 10894490
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa-------tgaaaaatactggggcaagtatccggt 98  Q
    ||||||||||||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||       ||  |||||  |||| | |||| ||||    
T  10894356 caaaaaagaagcactatatccaacaaagaacacatcaatactcgagagttaagtaattttagttaacattaattgggaaatatcggggtaggtat-cggt 10894454  T
Q  99 gcgggataattattggatactctcctgatacgtatt 134  Q
    || |||||||||| ||||||||||||||||||||||    
T  10894455 gcaggataattatcggatactctcctgatacgtatt 10894490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 1036831 - 1036946
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||||||   |||||||||  ||||||||||  |||||||||||||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  1036831 aaaatttaatatttagatactctccggatacgtatcggaaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 1036930  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  1036931 gtatcggggcttcaca 1036946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 27084098 - 27083983
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| || | |||||||||| |||||||| | ||||||| | ||||||||||| | |||||||||||  |||||||||| |||||| |||||||    
T  27084098 aaaatttaatctttggatactctccttatacgtattgggaagtattgagcaggtatcggtgcaggatacgcaggggatacgatacgtcatccattttgaa 27083999  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  27083998 gtatcggggcttcaca 27083983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 6707879 - 6707940
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagt 68  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  6707879 aaaaaagaagcattatatccataaaagaacacatcaatactcaagagttaagttattttagt 6707940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 32018376 - 32018313
Alignment:
Q  7 aaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaa 71  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  32018376 aaaaaagaaacactatatcgaaaaaagaacacat-agtactcaagagttaagttattttagttaa 32018313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 3212590 - 3212475
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| |||||||||||||| |||||| | ||||||| ||    ||||||||| |||||| |||||||    
T  3212590 aaaatttaatatttggatactctccggatacgtatcgggaagtatcgggcagatatcggtgcaggatacacaaggaatacgatacgtcatccattttgaa 3212491  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  3212490 gtatcggggcttcaca 3212475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 25834501 - 25834616
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||| |||| |||||||||||||| |||| |||| ||||| | | ||||||||||   |||||||||| ||||||  ||||||    
T  25834501 aaaatttaatatttggatactgtcctgatacgtatcgagaaatatcaggcatgtatcagtgcaggatacgcacgggatacgatacgtcatccaatttgaa 25834600  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||||||||||    
T  25834601 gtatcggggtttcaca 25834616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 13061211 - 13061277
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaagttattttagttaat 72  Q
    |||||||||||| |||||||||||||| ||||||||| ||||||| | |||||||||||||||||||    
T  13061211 caaaaaagaagcgctatatccaaaaaataacacatcaatactcaaaaattaagttattttagttaat 13061277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 248
Target Start/End: Complemental strand, 8357071 - 8356967
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | ||||||| |  |||||||||| |||||||||| |||||||||| | |||||||||||  |||||| ||| |||||| |||||||    
T  8357071 aaaatttaatatttggatactcttcggatacgtatcgggaagtatcggacaggtatcggtgcaggatacgcaggggatacggtacgtcatccattttgaa 8356972  T
Q  244 gtatc 248  Q
    |||||    
T  8356971 gtatc 8356967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Complemental strand, 8357674 - 8357624
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8357674 caaaaaagaagcactatatccaaaaaagaacacatcagtact-aagagttaa 8357624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 262
Target Start/End: Original strand, 32130664 - 32130782
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatc-gggtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||| |||||||||| ||| |||||  |||||||| | | |||||||||||  |||||| ||| |||| | |||| ||    
T  32130664 aaaatttaatatttggatactctcctgatacgtatcgggaaatatcgaacaggtatcagtgcaggatacgcaggggatacggtacgtcattcattttaaa 32130763  T
Q  244 gtatcggggtttcacaact 262  Q
    ||||||||| |||||||||    
T  32130764 gtatcggggcttcacaact 32130782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 26327576 - 26327524
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaag 58  Q
    |||||||||||||||||||||| ||||||||||||| |||||| |||||||||    
T  26327576 caaaaaagaagcactatatccataaaagaacacatcggtactccagagttaag 26327524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 248
Target Start/End: Complemental strand, 32018090 - 32017986
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||||  ||||||| |  |||||||| |  ||||||||||||| |||||| | |||||||||||  |||||||||| |||||| |||||||    
T  32018090 aaaatttaatattcatatactctacggatacgtataggaaagtatcgggcagatatcggtgcaggatacgcaggggatacgatacgtcatccattttgaa 32017991  T
Q  244 gtatc 248  Q
    |||||    
T  32017990 gtatc 32017986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 257
Target Start/End: Original strand, 7188784 - 7188894
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||  |||||||| |||||||||||| | |||||||||||  |||||| ||   ||||| |||||||    
T  7188784 aaaatttaatatttggatactctccggatacgtatcaggaagtatcaggcaggtatcggtgcaggatacgcaggggatacggta---catccattttgaa 7188880  T
Q  244 gtatcggggtttca 257  Q
    ||||||||| ||||    
T  7188881 gtatcggggcttca 7188894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 261
Target Start/End: Complemental strand, 3299254 - 3299137
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| ||  ||||||||||  ||||||||||  || ||||  ||||||||||| | |||||| ||||| |||||| |||||||||  |||||||    
T  3299254 aaaatttaatctttaaatactctccagatacgtatcggaaaatatcatgcaggtatcggtgcaggatatgcagaggatacggtacatcatctattttgaa 3299155  T
Q  244 gtatcggggtttcacaac 261  Q
    ||||| ||| ||||||||    
T  3299154 gtatcagggcttcacaac 3299137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 13607643 - 13607755
Alignment:
Q  27 aaaaaagaacacatcagtactcaagagttaagttattttagttaa-------tgaaaaatactggggcaagtatccggtgcgggataattattggatact 119  Q
    |||||| ||||||||| ||||||||| ||||||||||||||||||       ||||||||| ||||||| |||| |||||  ||||||||||   |||||    
T  13607643 aaaaaaaaacacatcaatactcaagaattaagttattttagttaacattaattgaaaaatattggggcaggtat-cggtgtaggataattatcatatact 13607741  T
Q  120 ctcctgatacgtat 133  Q
     |||||||||||||    
T  13607742 atcctgatacgtat 13607755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 1036139 - 1036190
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  1036139 caaaaaagaatcactatatccaaaaaaagaacacatcagtact-aagagttaa 1036190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 13607795 - 13607903
Alignment:
Q  150 ttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatc 248  Q
    ||||| |||| |||||||||| |||||||||   || |||  |||||||||| | | |||||| ||||| |||||||||| |||||| ||||||||||||    
T  13607795 ttaatcttcggatactctcctgatacgtatcagaaattattaggcaggtatcagtgcaggatatgcagaggatacgatacgtcatccattttgaagtatc 13607894  T
Q  249 ggggtttca 257  Q
     ||| ||||    
T  13607895 agggattca 13607903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 19128266 - 19128163
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||| ||||||| || ||||||||||  ||||||||||| ||||| || | ||||||| |||  |||||||||| ||| || |||| ||    
T  19128266 aaaatttaatcttcggatactcttctgatacgtatcggaaagtatcgggcgggtattggtgcaggatacacaggggatacgatacgtcaaccattttaaa 19128167  T
Q  244 gtat 247  Q
    ||||    
T  19128166 gtat 19128163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 7188102 - 7188154
Alignment:
Q  6 caaaaaagaagcactatatcc--aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| ||||||||||  ||||||||||||||||||||| |||||||||    
T  7188102 caaaaaagaatcactatatccaaaaaaaagaacacatcagtact-aagagttaa 7188154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 22988960 - 22989008
Alignment:
Q  23 atccaaaaaagaacacatcagtactcaagagtt-aagttattttagttaa 71  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||||    
T  22988960 atccaaaaaagaacacatc-gttctcaagagttaaagttattttagttaa 22989008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 23799436 - 23799388
Alignment:
Q  23 atccaaaaaagaacacatcagtactcaagagtt-aagttattttagttaa 71  Q
    ||||||||||||||||||| || |||||||||| ||||||||||||||||    
T  23799436 atccaaaaaagaacacatc-gttctcaagagttaaagttattttagttaa 23799388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 13045248 - 13045276
Alignment:
Q  41 cagtactcaagagttaagttattttagtt 69  Q
    |||||||||||||||||||||||||||||    
T  13045248 cagtactcaagagttaagttattttagtt 13045276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 31195674 - 31195725
Alignment:
Q  6 caaaaaagaagcactatatcc-aaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||| |||||||||| ||||||||||||| ||||||| |||||||||    
T  31195674 caaaaaagaatcactatatccaaaaaaagaacacaacagtact-aagagttaa 31195725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 30449 - 30564
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||  ||||||||||||||||||||| ||||||||||||| | ||||| ||| | |||| |||||||    
T  30449 aaaatttaatatttggatactctccggatacgtatcaggaagtatcgggcaggtatcggtgtaggatacgcaggaaatacggtacgttatccattttgaa 30548  T
Q  244 gtatcggggtttcaca 259  Q
    ||||||||| ||||||    
T  30549 gtatcggggcttcaca 30564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 252
Target Start/End: Complemental strand, 5625 - 5517
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    ||||||||||||| | |||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||  |||||| ||| || ||| |||||||    
T  5625 aaaatttaatatttggatactctcccgatacgtatcgggaagtatcgggcaggtatcggtgcaggatacgcaggggatacggtacgtcgtccattttgaa 5526  T
Q  244 gtatcgggg 252  Q
    |||||||||    
T  5525 gtatcgggg 5517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 13363 - 13257
Alignment:
Q  145 aaaatttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaa 243  Q
    |||||||||| |||  |||||||| | |||||||||| |||||||| | |||||||||| | ||||||||||| ||||||||||| |||||| |||||||    
T  13363 aaaatttaatcttcagatactctcttgatacgtatcgggaagtatctgacaggtatcggtgcaggatacgcaggagatacgatacgtcatccattttgaa 13264  T
Q  244 gtatcgg 250  Q
    |||||||    
T  13263 gtatcgg 13257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 13657 - 13607
Alignment:
Q  8 aaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaag 58  Q
    |||||||||||||||||||| ||||||||||||| |||||| |||||||||    
T  13657 aaaaagaagcactatatccataaaagaacacatcggtactccagagttaag 13607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 148 - 265
Target Start/End: Complemental strand, 10710 - 10592
Alignment:
Q  148 atttaatattcgaatactctcctcatacgtatcgagaagtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagta 246  Q
    ||||||| |||  |||||||||| |||||||||||||||||||||||| ||||||| | | |||||||||  |||| | |||||||||| |||| |||||    
T  10710 atttaatcttctgatactctcctgatacgtatcgagaagtatcgggcaagtatcggtgcatgatacgcaggggatatggtacatcatccattttaaagta 10611  T
Q  247 tcggggtttcacaactctt 265  Q
    || ||| ||||||||||||    
T  10610 tctgggcttcacaactctt 10592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 41408 - 41458
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41408 caaaaaagaagcactatatccaaaaaagaacacatcagtact-aagagttaa 41458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 27110 - 27160
Alignment:
Q  6 caaaaaagaagcactatatccaaaaaagaacacatcagtactcaagagttaa 57  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  27110 caaaaaagaagcaccatatccaaaaaagaacacatcagtact-aagagttaa 27160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 27827 - 27901
Alignment:
Q  186 gtatcgggcaggtatcgg-gtaggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    ||||||| |||||||||| | |||||| ||||  |||||| ||| |||||| |||||||||||||||| ||||||    
T  27827 gtatcggacaggtatcggtgcaggatatgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 27901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 259
Target Start/End: Original strand, 44657 - 44710
Alignment:
Q  206 aggatacgcagaagatacgatacatcatccgttttgaagtatcggggtttcaca 259  Q
    |||||||||||  |||||| ||| |||||| |||||||||||||||| ||||||    
T  44657 aggatacgcaggggatacggtacgtcatccattttgaagtatcggggcttcaca 44710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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