View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3675_high_10 (Length: 320)
Name: NF3675_high_10
Description: NF3675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3675_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 19 - 305
Target Start/End: Original strand, 35770875 - 35771161
Alignment:
| Q |
19 |
aattctacttttatgtttcctttttagaatcttgtgaatttgaaggaaattgaccttagattctgcaaagagctggttgaggtaccagatttgtctatgg |
118 |
Q |
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| T |
35770875 |
aattctacttttatgtttcctttttagaatcttgtgaatttgaaggaaattgaccttagattctgcaaagagctggttgaggtaccagatttgtctatgg |
35770974 |
T |
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| Q |
119 |
ctaagaatttggaaggattatcactttcccaatgtaaaaatctgcgtgaaatccatccttctattttatcactcaacaagcttcaagatctcgaattaga |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
35770975 |
ctaagaatttggaaggattatcactttcccaatgtaaaaatctgcgtgaaatccatccttctattttatcactcgacaagcttcaagatctcgaattaga |
35771074 |
T |
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| Q |
219 |
aggttgtaaaaagattacaagtcttcagactgacaatcatttagagtctctccaaagcatcacactcagcaactgctcatctctcag |
305 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35771075 |
aggttgtaaaaagattacaagtcttcagactgacaatcatttagagtctctccaaagcatcacactcagcaactgctcatctctcag |
35771161 |
T |
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