View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3675_high_12 (Length: 301)
Name: NF3675_high_12
Description: NF3675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3675_high_12 |
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Alignment Details
Target: chr4 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 7 - 286
Target Start/End: Complemental strand, 14081474 - 14081195
Alignment:
| Q |
7 |
ccaccatcccggctgtcccggctataccgatcccgatcgaaacccttcctcctatcaaacccatcaaaatcatgctcagatcttttcctaaccaatctag |
106 |
Q |
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| T |
14081474 |
ccaccatcccggctgtcccggctataccgatcccgatcgaaacccttcctcctatcaaacccatcaaaatcatgctcagatcttttcctaaccaatctag |
14081375 |
T |
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| Q |
107 |
aaccttcccgatcttcctccaccgttcgatccctctcgtatcgcgacgaagaagacgaagaaattaaactcttcctcacattctcctgcttataataaaa |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14081374 |
aaccttcccgatcttcctccaccgttcgatccctctcgtatcgcgacgaagaagacgaagaaattaaactcttcctcacattctcctgcttataataaaa |
14081275 |
T |
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| Q |
207 |
actcctctgaccagtagatgaaaacgaacggttaagattcgatgaatccttcacaccattcttatcaccaccgttctttt |
286 |
Q |
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||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
14081274 |
acttctctgaccagtagatgaaaacgaacggttgagatttgatgaatccttcacaccattcttatcaccaccgttctttt |
14081195 |
T |
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