View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3675_low_16 (Length: 297)

Name: NF3675_low_16
Description: NF3675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3675_low_16
NF3675_low_16
[»] chr7 (29 HSPs)
chr7 (16-193)||(38858642-38858819)
chr7 (16-196)||(19830416-19830596)
chr7 (16-193)||(37786766-37786943)
chr7 (16-192)||(19590525-19590701)
chr7 (16-189)||(4641443-4641616)
chr7 (18-192)||(32004985-32005159)
chr7 (18-196)||(35289272-35289450)
chr7 (16-189)||(29100220-29100393)
chr7 (18-194)||(2659211-2659387)
chr7 (18-194)||(34534162-34534338)
chr7 (23-196)||(23953105-23953277)
chr7 (32-194)||(19590909-19591072)
chr7 (23-196)||(4478076-4478249)
chr7 (32-195)||(34533788-34533952)
chr7 (34-194)||(37787153-37787314)
chr7 (32-194)||(38859025-38859188)
chr7 (32-194)||(2658837-2659000)
chr7 (33-195)||(32004611-32004774)
chr7 (32-194)||(29099846-29100011)
chr7 (76-192)||(35288903-35289019)
chr7 (50-194)||(38160949-38161093)
chr7 (32-193)||(19830804-19830965)
chr7 (54-196)||(28583435-28583577)
chr7 (32-189)||(4641828-4641983)
chr7 (75-194)||(23952728-23952848)
chr7 (51-191)||(28584326-28584466)
chr7 (16-104)||(35579256-35579344)
chr7 (23-58)||(32427397-32427432)
chr7 (16-56)||(35579034-35579074)
[»] chr8 (29 HSPs)
chr8 (16-194)||(44831614-44831792)
chr8 (16-194)||(19176659-19176837)
chr8 (16-194)||(12571861-12572040)
chr8 (19-195)||(41681131-41681306)
chr8 (16-193)||(9930026-9930203)
chr8 (18-194)||(11656453-11656630)
chr8 (16-189)||(33328161-33328334)
chr8 (16-188)||(13224645-13224816)
chr8 (16-195)||(31133217-31133396)
chr8 (16-192)||(9178005-9178180)
chr8 (32-193)||(13225023-13225185)
chr8 (34-194)||(34540934-34541095)
chr8 (32-194)||(19176288-19176451)
chr8 (16-189)||(4630161-4630328)
chr8 (32-193)||(44831246-44831408)
chr8 (75-192)||(41681562-41681679)
chr8 (18-134)||(33743290-33743406)
chr8 (66-193)||(11656876-11657003)
chr8 (66-189)||(12572270-12572393)
chr8 (32-194)||(33742920-33743082)
chr8 (75-189)||(9928912-9929026)
chr8 (66-191)||(31133639-31133764)
chr8 (32-190)||(33328524-33328683)
chr8 (84-194)||(11336959-11337069)
chr8 (66-194)||(4629795-4629923)
chr8 (54-194)||(10918124-10918264)
chr8 (46-181)||(8073951-8074085)
chr8 (51-110)||(43958267-43958326)
chr8 (159-195)||(9177664-9177700)
[»] chr6 (35 HSPs)
chr6 (16-195)||(18257134-18257313)
chr6 (16-194)||(20741098-20741276)
chr6 (16-192)||(10900299-10900475)
chr6 (16-192)||(11276951-11277127)
chr6 (16-193)||(15828010-15828187)
chr6 (16-194)||(28472635-28472812)
chr6 (16-194)||(29859824-29860001)
chr6 (18-195)||(12935528-12935705)
chr6 (16-194)||(11444985-11445163)
chr6 (18-192)||(1149802-1149977)
chr6 (16-191)||(31470685-31470860)
chr6 (32-194)||(2319670-2319832)
chr6 (23-189)||(10899942-10900109)
chr6 (32-194)||(12935155-12935318)
chr6 (16-191)||(18505288-18505463)
chr6 (16-189)||(2322588-2322760)
chr6 (32-194)||(11445371-11445534)
chr6 (32-195)||(23075512-23075676)
chr6 (32-194)||(22219737-22219900)
chr6 (29-192)||(4811372-4811535)
chr6 (16-193)||(23073998-23074164)
chr6 (32-193)||(31470314-31470476)
chr6 (66-189)||(18504922-18505045)
chr6 (75-192)||(18257565-18257682)
chr6 (32-193)||(20741485-20741650)
chr6 (23-193)||(11276589-11276760)
chr6 (50-190)||(29033436-29033577)
chr6 (66-191)||(15827639-15827766)
chr6 (84-192)||(4811693-4811801)
chr6 (104-195)||(1149462-1149553)
chr6 (64-189)||(3835143-3835268)
chr6 (50-190)||(29035040-29035180)
chr6 (51-194)||(18296143-18296285)
chr6 (17-99)||(35163557-35163639)
chr6 (137-192)||(22534215-22534270)
[»] chr4 (61 HSPs)
chr4 (16-190)||(33109686-33109860)
chr4 (16-194)||(12234327-12234505)
chr4 (22-194)||(25447611-25447783)
chr4 (16-194)||(25937668-25937846)
chr4 (16-190)||(46193774-46193948)
chr4 (16-192)||(11153516-11153692)
chr4 (16-194)||(22434547-22434723)
chr4 (16-193)||(15523603-15523780)
chr4 (16-193)||(22170306-22170482)
chr4 (23-195)||(38962195-38962367)
chr4 (16-190)||(4219559-4219733)
chr4 (16-190)||(23494445-23494619)
chr4 (16-194)||(51020795-51020973)
chr4 (16-193)||(48526195-48526371)
chr4 (16-189)||(2118665-2118837)
chr4 (16-194)||(54995437-54995614)
chr4 (32-192)||(22434179-22434340)
chr4 (32-192)||(45082808-45082969)
chr4 (32-194)||(4219943-4220106)
chr4 (33-195)||(15523232-15523395)
chr4 (30-192)||(46193405-46193568)
chr4 (76-194)||(23494872-23494990)
chr4 (16-194)||(45082430-45082606)
chr4 (32-192)||(25447247-25447408)
chr4 (32-194)||(20470895-20471058)
chr4 (66-198)||(33109883-33110015)
chr4 (66-193)||(25938090-25938217)
chr4 (66-192)||(12234748-12234874)
chr4 (66-196)||(54995065-54995195)
chr4 (16-124)||(12503805-12503913)
chr4 (32-181)||(48526565-48526715)
chr4 (78-190)||(18763951-18764063)
chr4 (32-193)||(11153145-11153307)
chr4 (32-189)||(18751602-18751760)
chr4 (75-192)||(35363028-35363146)
chr4 (66-196)||(51021215-51021344)
chr4 (50-191)||(20958264-20958403)
chr4 (66-190)||(2118295-2118419)
chr4 (50-196)||(48713749-48713895)
chr4 (54-179)||(20957202-20957327)
chr4 (46-179)||(44892547-44892680)
chr4 (51-195)||(48293591-48293735)
chr4 (51-174)||(43243685-43243807)
chr4 (54-174)||(43281198-43281317)
chr4 (64-197)||(48708290-48708423)
chr4 (32-175)||(12503453-12503597)
chr4 (66-193)||(10258306-10258433)
chr4 (51-192)||(48294946-48295088)
chr4 (46-191)||(44890518-44890663)
chr4 (64-189)||(16690939-16691064)
chr4 (46-134)||(43242328-43242416)
chr4 (122-193)||(16318251-16318322)
chr4 (64-192)||(16691489-16691616)
chr4 (16-82)||(18751971-18752037)
chr4 (16-104)||(17504061-17504149)
chr4 (16-56)||(17504329-17504369)
chr4 (65-192)||(30597939-30598065)
chr4 (16-56)||(35193443-35193483)
chr4 (51-131)||(44220781-44220861)
chr4 (84-192)||(55189528-55189636)
chr4 (16-46)||(40160239-40160269)
[»] chr1 (39 HSPs)
chr1 (16-193)||(50970647-50970824)
chr1 (16-193)||(29869619-29869796)
chr1 (16-195)||(18984116-18984295)
chr1 (23-193)||(5540194-5540364)
chr1 (23-193)||(15646571-15646741)
chr1 (16-190)||(33144288-33144462)
chr1 (16-189)||(5962947-5963120)
chr1 (16-189)||(15173099-15173272)
chr1 (23-192)||(29306953-29307122)
chr1 (16-192)||(8678911-8679086)
chr1 (16-194)||(9018971-9019149)
chr1 (16-192)||(21856412-21856588)
chr1 (16-192)||(17433216-17433392)
chr1 (16-195)||(39154016-39154195)
chr1 (18-195)||(26859431-26859607)
chr1 (23-192)||(29307317-29307487)
chr1 (34-198)||(50970272-50970437)
chr1 (32-196)||(15173478-15173642)
chr1 (30-196)||(17433597-17433764)
chr1 (66-193)||(39154439-39154566)
chr1 (75-196)||(8678537-8678658)
chr1 (32-192)||(29870003-29870164)
chr1 (23-194)||(9019338-9019510)
chr1 (32-183)||(33143926-33144078)
chr1 (66-193)||(18984538-18984665)
chr1 (66-196)||(5539812-5539942)
chr1 (52-193)||(52268289-52268430)
chr1 (33-191)||(4636356-4636515)
chr1 (32-190)||(21856044-21856203)
chr1 (75-192)||(26859059-26859176)
chr1 (75-194)||(15646190-15646309)
chr1 (18-132)||(4636033-4636146)
chr1 (66-191)||(5962579-5962704)
chr1 (76-190)||(52269177-52269291)
chr1 (106-194)||(2733416-2733504)
chr1 (92-192)||(47827033-47827132)
chr1 (32-192)||(17112282-17112442)
chr1 (117-190)||(47826966-47827039)
chr1 (22-56)||(17088516-17088550)
[»] chr5 (43 HSPs)
chr5 (16-196)||(2865124-2865304)
chr5 (16-192)||(5819298-5819474)
chr5 (16-194)||(18183338-18183516)
chr5 (16-192)||(8647438-8647614)
chr5 (16-192)||(19359136-19359312)
chr5 (16-195)||(8460927-8461106)
chr5 (16-194)||(24362205-24362383)
chr5 (16-194)||(15708969-15709146)
chr5 (16-193)||(29455111-29455288)
chr5 (20-194)||(14215616-14215790)
chr5 (16-194)||(15372242-15372420)
chr5 (16-194)||(164560-164738)
chr5 (32-196)||(5818925-5819090)
chr5 (16-195)||(24331929-24332112)
chr5 (32-196)||(18182966-18183131)
chr5 (66-195)||(19359555-19359684)
chr5 (32-194)||(8647822-8647985)
chr5 (32-193)||(8461315-8461477)
chr5 (27-199)||(14463901-14464072)
chr5 (30-193)||(25000471-25000635)
chr5 (16-193)||(16018588-16018763)
chr5 (30-196)||(16018969-16019136)
chr5 (32-183)||(24361846-24361997)
chr5 (33-192)||(164191-164350)
chr5 (32-190)||(2864756-2864915)
chr5 (32-190)||(14215243-14215402)
chr5 (32-183)||(24325221-24325372)
chr5 (50-192)||(7349420-7349562)
chr5 (16-170)||(25000112-25000266)
chr5 (32-194)||(24331557-24331722)
chr5 (32-193)||(29454739-29454901)
chr5 (72-191)||(4222147-4222266)
chr5 (54-179)||(6019177-6019302)
chr5 (79-190)||(15371873-15371983)
chr5 (66-192)||(7348559-7348685)
chr5 (52-192)||(4623148-4623286)
chr5 (32-192)||(15709353-15709513)
chr5 (64-179)||(4624642-4624757)
chr5 (74-191)||(6018315-6018431)
chr5 (54-192)||(4219663-4219800)
chr5 (50-141)||(13814131-13814226)
chr5 (66-113)||(14462683-14462730)
chr5 (16-56)||(16752717-16752757)
[»] scaffold0295 (2 HSPs)
scaffold0295 (16-194)||(4791-4969)
scaffold0295 (78-190)||(5222-5334)
[»] scaffold0273 (2 HSPs)
scaffold0273 (16-194)||(4576-4754)
scaffold0273 (32-153)||(4242-4364)
[»] chr2 (37 HSPs)
chr2 (18-196)||(11090517-11090695)
chr2 (16-194)||(239351-239528)
chr2 (16-193)||(40027139-40027316)
chr2 (16-196)||(22374316-22374496)
chr2 (16-179)||(3025479-3025641)
chr2 (16-194)||(1978106-1978284)
chr2 (16-194)||(18451200-18451378)
chr2 (16-194)||(40815714-40815892)
chr2 (19-189)||(14432145-14432315)
chr2 (16-193)||(26538096-26538273)
chr2 (16-192)||(43058333-43058509)
chr2 (18-192)||(28616613-28616788)
chr2 (23-194)||(26538454-26538626)
chr2 (23-189)||(8425736-8425902)
chr2 (18-193)||(7446341-7446519)
chr2 (51-193)||(20444748-20444890)
chr2 (32-194)||(7446730-7446893)
chr2 (32-193)||(18450829-18450991)
chr2 (46-192)||(35779708-35779854)
chr2 (46-194)||(20440431-20440578)
chr2 (32-194)||(22374709-22374872)
chr2 (32-196)||(11090904-11091069)
chr2 (75-195)||(28847123-28847243)
chr2 (66-189)||(40027559-40027682)
chr2 (32-190)||(40815347-40815506)
chr2 (32-194)||(43058717-43058879)
chr2 (66-195)||(1978528-1978657)
chr2 (46-190)||(8972239-8972383)
chr2 (51-191)||(35781067-35781207)
chr2 (66-193)||(28617033-28617160)
chr2 (32-183)||(239736-239888)
chr2 (33-192)||(3025848-3026006)
chr2 (50-190)||(15551501-15551641)
chr2 (33-189)||(8425358-8425514)
chr2 (32-190)||(14432525-14432684)
chr2 (66-190)||(15552473-15552596)
chr2 (16-194)||(28143400-28143577)
[»] chr3 (58 HSPs)
chr3 (16-196)||(31779021-31779201)
chr3 (16-192)||(39555946-39556122)
chr3 (16-196)||(5136976-5137156)
chr3 (16-189)||(41046703-41046876)
chr3 (18-194)||(20840558-20840734)
chr3 (16-194)||(24300925-24301103)
chr3 (16-193)||(37726928-37727105)
chr3 (16-193)||(23644461-23644638)
chr3 (16-194)||(26837725-26837902)
chr3 (23-192)||(43973441-43973610)
chr3 (16-194)||(30104480-30104657)
chr3 (37-194)||(48452987-48453144)
chr3 (16-196)||(25853596-25853776)
chr3 (18-192)||(32535330-32535508)
chr3 (16-193)||(27393946-27394123)
chr3 (16-188)||(22425182-22425354)
chr3 (32-194)||(43973824-43973987)
chr3 (16-193)||(17464860-17465038)
chr3 (32-192)||(37727314-37727475)
chr3 (16-179)||(26274936-26275098)
chr3 (32-195)||(4275748-4275912)
chr3 (32-193)||(20840945-20841107)
chr3 (32-193)||(27393660-27393822)
chr3 (32-193)||(39555577-39555739)
chr3 (30-194)||(29801798-29801963)
chr3 (66-193)||(30098182-30098309)
chr3 (66-189)||(32534962-32535085)
chr3 (51-189)||(25612381-25612519)
chr3 (32-193)||(31778652-31778814)
chr3 (32-192)||(23644849-23645010)
chr3 (71-192)||(29801356-29801477)
chr3 (66-194)||(17464489-17464617)
chr3 (32-194)||(5137365-5137528)
chr3 (32-192)||(25853234-25853395)
chr3 (50-192)||(50116812-50116954)
chr3 (32-194)||(22424812-22424975)
chr3 (32-189)||(26274570-26274728)
chr3 (32-196)||(26837356-26837521)
chr3 (66-195)||(45965935-45966064)
chr3 (53-201)||(23228414-23228561)
chr3 (66-194)||(51474753-51474881)
chr3 (51-195)||(37220554-37220698)
chr3 (32-189)||(24300560-24300717)
chr3 (78-191)||(51473429-51473542)
chr3 (52-179)||(32697106-32697232)
chr3 (32-167)||(41047083-41047218)
chr3 (59-157)||(18010157-18010255)
chr3 (47-190)||(25420541-25420684)
chr3 (116-195)||(37222040-37222119)
chr3 (65-181)||(25419155-25419273)
chr3 (50-181)||(23227273-23227398)
chr3 (16-56)||(55192253-55192293)
chr3 (15-58)||(49407929-49407972)
chr3 (16-56)||(27199838-27199878)
chr3 (16-76)||(29801532-29801592)
chr3 (16-56)||(37075824-37075864)
chr3 (16-56)||(27200062-27200102)
chr3 (16-56)||(36701244-36701284)
[»] scaffold0951 (2 HSPs)
scaffold0951 (18-195)||(1664-1841)
scaffold0951 (32-194)||(2051-2214)
[»] scaffold0007 (3 HSPs)
scaffold0007 (16-193)||(64301-64478)
scaffold0007 (77-189)||(64735-64847)
scaffold0007 (16-190)||(205738-205911)
[»] scaffold0019 (1 HSPs)
scaffold0019 (16-194)||(134042-134220)
[»] scaffold1223 (2 HSPs)
scaffold1223 (16-195)||(750-928)
scaffold1223 (23-192)||(1116-1286)
[»] scaffold0027 (2 HSPs)
scaffold0027 (16-194)||(42528-42705)
scaffold0027 (23-189)||(42172-42339)
[»] scaffold0432 (2 HSPs)
scaffold0432 (16-189)||(10242-10414)
scaffold0432 (85-189)||(9935-10039)
[»] scaffold0417 (2 HSPs)
scaffold0417 (16-173)||(10640-10797)
scaffold0417 (66-192)||(11042-11168)
[»] scaffold0176 (2 HSPs)
scaffold0176 (25-193)||(18834-19001)
scaffold0176 (95-192)||(19069-19166)
[»] scaffold0113 (1 HSPs)
scaffold0113 (66-193)||(28662-28789)
[»] scaffold0157 (2 HSPs)
scaffold0157 (16-124)||(16564-16672)
scaffold0157 (32-175)||(16880-17024)
[»] scaffold1585 (1 HSPs)
scaffold1585 (50-191)||(568-709)
[»] scaffold1696 (1 HSPs)
scaffold1696 (51-179)||(462-589)
[»] scaffold0057 (2 HSPs)
scaffold0057 (46-189)||(61857-62000)
scaffold0057 (118-195)||(61025-61102)
[»] scaffold0168 (1 HSPs)
scaffold0168 (50-135)||(7691-7776)
[»] scaffold0076 (1 HSPs)
scaffold0076 (89-189)||(8451-8551)


Alignment Details
Target: chr7 (Bit Score: 166; Significance: 7e-89; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 38858819 - 38858642
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38858819 agcatagtgggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 38858720  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38858719 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 38858642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 19830596 - 19830416
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  19830596 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19830497  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  19830496 gttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctatt 19830416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 37786943 - 37786766
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  37786943 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37786844  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||| ||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  37786843 gttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 37786766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 19590701 - 19590525
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  19590701 agcatagggggtaggtctaaaactgtcatttctctgggtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaaggacc 19590602  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  19590601 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19590525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 4641616 - 4641443
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||| |||||||||||| |||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4641616 agcatagggggcaggtctaaaactatcatttctctgcatttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 4641517  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  4641516 gttttgttatgtttcaaaagagcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaa 4641443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 32004985 - 32005159
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgt 117  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||| || ||||||    
T  32004985 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcaacaaaaatgataattaaaggaccgt 32005084  T
Q  118 tttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  32005085 tttgttctattttaaaagggcatgaccagtttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaagcc 32005159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 35289272 - 35289450
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgt 117  Q
    |||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||||| ||||||    
T  35289272 catagggggtaggtctaaaactattatttctctgcgtttttagagaataaaatggggggtatgacgaaaaatgcaaccaaaatgataattgaaggaccgt 35289371  T
Q  118 tttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  35289372 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctatt 35289450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 29100220 - 29100393
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  29100220 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaagacc 29100319  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||||||||||||||||||| ||||||||| ||| |||||||  |||||||||||||||||||||||| |||||    
T  29100320 gttttgttctgttttaaaagggcaggaccaattttgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 29100393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 2659211 - 2659387
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgt 117  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  2659211 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgt 2659310  T
Q  118 tttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||| ||| |||||||||| ||| || |||||||| |||||||||||| ||| ||||||||||    
T  2659311 tttgttctgttttaaaagggcaagaccagtttcatgaataggccaaaacgcgaggaccaaaattgtaattaagccta 2659387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 34534162 - 34534338
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgt 117  Q
    |||||| |||||||||||||||||||||| ||||  ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  34534162 cataggtggtaggtctaaaactgtcatttctctgtttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 34534261  T
Q  118 tttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||| | |||||| |||||||||||||| ||||||||||||| ||||||||| | ||||||||||    
T  34534262 tttgttctgttttaaatgggcaggatcagtttcgtgagtaggccaaaacacgagaaccaaaagtataattaagccta 34534338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 23953105 - 23953277
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgt 122  Q
    |||||| |||||||||||| |||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  23953105 ggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 23953204  T
Q  123 tctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    |||||||| |||| || ||||||||||||||||||   ||||||||||||||||||| || || ||||||||||    
T  23953205 tctgttttgaaagggcgggaccagtttcgtgagtagatcaaaacacgaggaccaaaaatg-taataagcctatt 23953277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 19590909 - 19591072
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  19590909 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19591008  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||    
T  19591009 aaaagggcaggaccagtttcgtgagtaggccaaaacacgagtaccaaaagtgtaattaagccta 19591072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 4478076 - 4478249
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgt 122  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||| ||| || ||| ||||||||||||||||||||||||||| |||  | || |    
T  4478076 ggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgagggataagacgaaaaatgcaacaaaaatgataattgaaggacaatgttat 4478175  T
Q  123 tctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||  |||| ||||||    
T  4478176 tctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaaacctatt 4478249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 195
Target Start/End: Complemental strand, 34533952 - 34533788
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||| |||||||| ||||||||||| |||  | ||||| || ||||||||  ||||||||||||||||||||||||||||||| |||| |||||||||    
T  34533952 ctaaaagtgtcatttctctgcgtttttggagtttgaaaataggaggtaggacggaaaatgcaacaaaaatgataattgaatgaccattttattctgtttt 34533853  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  34533852 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctat 34533788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 37787153 - 37787314
Alignment:
Q  34 aaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaa 132  Q
    ||||||||||||| ||||||||| | |||  | ||||| || |||||||| |||||||||||||||||||||||||||  |||||||||||||| |||||    
T  37787153 aaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttctgatttaa 37787252  T
Q  133 aagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||    
T  37787253 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtataattaagccta 37787314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 38859025 - 38859188
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||||| |||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  38859025 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 38859124  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  38859125 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 38859188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 2659000 - 2658837
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||| ||||| ||||||||||| |||  | ||||| || |||| ||| ||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  2659000 ctaaaactgccatttctctgcgtttttggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 2658901  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||    
T  2658900 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacaaaaagtgtaattaagccta 2658837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 33 - 195
Target Start/End: Complemental strand, 32004774 - 32004611
Alignment:
Q  33 taaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 131  Q
    |||||||||||||| ||||||||| | |||  | ||||| || |||||| | ||||||||||||||||||||||||||| |||| |||||||||||||||    
T  32004774 taaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagggcgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttta 32004675  T
Q  132 aaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    |||| |||||| || ||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  32004674 aaagggcaggatcaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctat 32004611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 29100011 - 29099846
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||||||| ||||| | | |  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  29100011 ctaaaactgtcatttatctacgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29099912  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaa--gtgttattaagccta 194  Q
    ||||| |||||| |||||||||||||| |||||||||||||||||||||  |||||| ||||||||    
T  29099911 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaaaggtgttaataagccta 29099846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 192
Target Start/End: Complemental strand, 35289019 - 35288903
Alignment:
Q  76 gtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacc 175  Q
    ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| ||||    
T  35289019 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgacc 35288920  T
Q  176 aaaagtgttattaagcc 192  Q
    |||||||| ||||||||    
T  35288919 aaaagtgtaattaagcc 35288903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 38161093 - 38160949
Alignment:
Q  50 tgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagttt 149  Q
    ||||||||| ||| ||||||||||| ||||||| ||||||||||||||||| ||||||||| |||  ||||||||||||||||||| ||||||  | |||    
T  38161093 tgcgtttttggaggataaaatggggagtaggacgaaaaatgcaacaaaaataataattgaaggacaattttgttctgttttaaaagggcaggattatttt 38160994  T
Q  150 cgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||    
T  38160993 cgtgagtaggccaaaacccgaggaccaaaagtgtaattaagccta 38160949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 19830804 - 19830965
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| |||| |||| | |||  | ||||| || |||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||    
T  19830804 ctaaaactgtcatttctctgtgtttctggagtttgaaaataggaggtaggac-aaaaatgcaacaaaaatgataattgaagtaccgttttgttatgtttt 19830902  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||  |||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||    
T  19830903 aaaaggacaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 19830965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 28583577 - 28583435
Alignment:
Q  54 ttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtg 153  Q
    ||||| ||| ||||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||| || ||||||||||| |||| |||| | || ||    
T  28583577 tttttggaggataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacagttttattatgttttaaaagggcagaaccaatctcatg 28583478  T
Q  154 agtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  28583477 agtaggccaaaacacgaggaccaaaagtgtaattaagcctatt 28583435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 32 - 189
Target Start/End: Original strand, 4641828 - 4641983
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| ||  ||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||    
T  4641828 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggacgtaggacgaaatatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 4641927  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||||  ||||||||||   ||||||| ||||||||||||||||||||||||| |||||    
T  4641928 aaaaggacaggaccagt---gtgagtaggccaaaacacgaggaccaaaagtgtaattaa 4641983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 23952848 - 23952728
Alignment:
Q  75 ggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagta-tgccaaaacacgagga 173  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||| ||||| |||||||||||  | |||||||||||||    
T  23952848 ggtaggacgaaaaatgcaaccaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccaatttcgtgagtagggtcaaaacacgagga 23952749  T
Q  174 ccaaaagtgttattaagccta 194  Q
    |||||||||| ||||||||||    
T  23952748 ccaaaagtgtaattaagccta 23952728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 28584326 - 28584466
Alignment:
Q  51 gcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttc 150  Q
    |||||||| ||| ||||||||||||||| ||| |||||| |||||||||||||||||||| |||  |||||||||||||||||||  || ||||| ||||    
T  28584326 gcgtttttggaggataaaatggggggtaagacgaaaaatacaacaaaaatgataattgaaggacaattttgttctgttttaaaaggacatgaccaatttc 28584425  T
Q  151 gtgagtatgccaaaacacgaggaccaaaagtgttattaagc 191  Q
    |||| || |||||| ||||||||| |||||||| |||||||    
T  28584426 gtgaataggccaaagcacgaggacgaaaagtgtaattaagc 28584466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 35579256 - 35579344
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgata 104  Q
    |||||||||||||||||||||||||| ||||  |||||||||| |||   ||||| || |||| ||| |||| ||||| ||| ||||||    
T  35579256 agcatagggggtaggtctaaaactgttatttccctgcgtttttagagttgaaaataggaggtatgactaaaactgcaaaaaacatgata 35579344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 32427397 - 32427432
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttt 58  Q
    |||||||||||||||||||||||| |||||||||||    
T  32427397 ggggtaggtctaaaactgtcatttctctgcgttttt 32427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 35579074 - 35579034
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttt 56  Q
    |||||||||| ||||||||||| |||||||| |||||||||    
T  35579074 agcataggggataggtctaaaaatgtcatttctctgcgttt 35579034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 4e-87; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 44831614 - 44831792
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  44831614 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaataacc 44831713  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44831714 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 44831792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 19176659 - 19176837
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  19176659 agcataggtggtaggtctaaaactgtcatttgtctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19176758  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||    
T  19176759 gttttgttctgttttaaaagggcaggaccagttacgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19176837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 12572040 - 12571861
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggt-aggaccaaaaatgcaacaaaaatgataattgaatgac 114  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  12572040 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggttaggacgaaaaatgcaacaaaaatgataattgaatgac 12571941  T
Q  115 cgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||||||||||||||||||| | || |||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  12571940 cgttttgttctgttttaaaagggtagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 12571861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 19 - 195
Target Start/End: Complemental strand, 41681306 - 41681131
Alignment:
Q  19 atagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgtt 118  Q
    |||||||||| || |||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||    
T  41681306 atagggggtatgtttaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggaccgtt 41681208  T
Q  119 ttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  41681207 ttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctat 41681131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 9930026 - 9930203
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||||||||||||| |||||| |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  9930026 agcatagggggtaggtctaaaactatcatttctctgcgcttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaaggacc 9930125  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
     ||||||||| ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  9930126 attttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 9930203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 11656630 - 11656453
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttg-agaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccg 116  Q
    |||| |||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||    
T  11656630 cataaggggtaggtctaaaactgccatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 11656531  T
Q  117 ttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  11656530 ttttgttcagttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11656453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 33328334 - 33328161
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| | ||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||| ||||| ||||    
T  33328334 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatcgagggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 33328235  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||||||||||||||||||| ||| || |||||||||||||| ||||||||||||||||||||||||| |||||    
T  33328234 gttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 33328161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 13224816 - 13224645
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||| ||      
T  13224816 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaattcaacaaaaatgataattgaaggatt 13224717  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttatta 188  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| |||||||||||| ||||    
T  13224716 gttttgttctgttttaaaagggca-gaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaatta 13224645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 31133396 - 31133217
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||| | |||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||     
T  31133396 agcataagaggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggact 31133297  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    |||||||| ||||||||||| || |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||    
T  31133296 gttttgttttgttttaaaagggcgggaccagtttcgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcctat 31133217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 9178005 - 9178180
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| || ||  ||||||||||||||||||||| ||||| ||||    
T  9178005 agcataggaggtaggtctaaaattgtcatttctctgcgttttttgagaataaaatggggg-taagatgaaaaatgcaacaaaaatgatacttgaaggacc 9178103  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||||||||||||||| || ||| || |||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  9178104 gttttgttctgttttaagagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 9178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 13225023 - 13225185
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||| ||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  13225023 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 13225122  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  13225123 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 13225185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 34 - 194
Target Start/End: Original strand, 34540934 - 34541095
Alignment:
Q  34 aaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaa 132  Q
    |||||| |||||| ||||||||| || ||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||| ||||||| ||||||||    
T  34540934 aaaactatcatttctctgcgtttcttaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaa 34541033  T
Q  133 aagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  34541034 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 34541095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 19176451 - 19176288
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||| |||||||| ||||||||| | |||  | ||||| || ||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  19176451 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtcggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 19176352  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  19176351 aaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 19176288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 4630161 - 4630328
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||  ||||||||||||      ||||||||| ||||    
T  4630161 agcatagggggtaggtctaaaactgtcatttttctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaaca------ataattgaaggacc 4630254  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    ||| | |||||||||||||  ||||||||| |||||||||||  ||||||||||| || ||||||||| |||||    
T  4630255 gttgtattctgttttaaaaatgcaggaccaatttcgtgagtagcccaaaacacgatgatcaaaagtgtaattaa 4630328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 44831408 - 44831246
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||||| |||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  44831408 ctaaaactatcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataatggaaggaccgttttgttctgtttt 44831309  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||| ||||||||| ||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  44831308 aaaagggcaggaccaatttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcct 44831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 41681562 - 41681679
Alignment:
Q  75 ggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggac 174  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||| || ||||||||||||||||    
T  41681562 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggaccagtttcgtgattaggccaaaacacgaggac 41681661  T
Q  175 caaaagtgttattaagcc 192  Q
    ||||||||| ||||||||    
T  41681662 caaaagtgtaattaagcc 41681679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 18 - 134
Target Start/End: Original strand, 33743290 - 33743406
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgt 117  Q
    ||||||| |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||    
T  33743290 catagggagtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaaaaccgt 33743389  T
Q  118 tttgttctgttttaaaa 134  Q
    |||||||||||||||||    
T  33743390 tttgttctgttttaaaa 33743406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 11656876 - 11657003
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||  | |||||||||||||||||| |||||||    
T  11656876 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggccgggaccagtttcgtgagtaggccaaaa 11656975  T
Q  166 cacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||||||| |||||||||    
T  11656976 cacgaggaccaaaagtgtaattaagcct 11657003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 12572270 - 12572393
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||  ||||||    
T  12572270 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagagcatgactagtttcgtgagtagaccaaaa 12572369  T
Q  166 cacgaggaccaaaagtgttattaa 189  Q
    |||||||||||||||||| |||||    
T  12572370 cacgaggaccaaaagtgtaattaa 12572393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 33743082 - 33742920
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | | | || ||||| || |||||||| ||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  33743082 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcatcaaaaatgataattgaaagaccgttt-gttctgtttt 33742984  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| ||| ||||||||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  33742983 aaaagggcaagaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 33742920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 9929026 - 9928912
Alignment:
Q  75 ggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggac 174  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||   ||||||||||||||    
T  9929026 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggac 9928927  T
Q  175 caaaagtgttattaa 189  Q
    ||||||||| |||||    
T  9928926 caaaagtgtaattaa 9928912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 31133639 - 31133764
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||| ||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||| |||||||||||||| |||||||    
T  31133639 aaaataggaggtatgacgaaaaatgcaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggatcagtttcgtgagtaggccaaaa 31133738  T
Q  166 cacgaggaccaaaagtgttattaagc 191  Q
    |||||||||||||||||| |||||||    
T  31133739 cacgaggaccaaaagtgtaattaagc 31133764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 33328524 - 33328683
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||| ||||| ||||||||| | |||  | |||||||| ||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||    
T  33328524 ctaaaactgccatttctctgcgtttctggagtttgaaaatgggaggtgggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 33328623  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    ||||||||| ||| ||||||||||||| || |||||||||||||||||||| | ||||||    
T  33328624 aaaagagcatgactagtttcgtgagtaggctaaaacacgaggaccaaaagtctaattaag 33328683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 84 - 194
Target Start/End: Original strand, 11336959 - 11337069
Alignment:
Q  84 aaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgt 183  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| || |||||| ||||||||||| |||||||||||| ||||||||||||    
T  11336959 aaaaatgcaacaaaaatgataattgaaagaccgttttattctgttttaaaagggcgggaccaatttcgtgagtaagccaaaacacgaagaccaaaagtgt 11337058  T
Q  184 tattaagccta 194  Q
     ||||||||||    
T  11337059 aattaagccta 11337069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 4629923 - 4629795
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||| ||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||    
T  4629923 aaaataggaggtaagacgaaaaatgcaataaaaatgataattgaatgaccgttttgttctattttaaaagggcaggaccagtttcgtgaatatgccaaaa 4629824  T
Q  166 cacgaggaccaaaagtgttattaagccta 194  Q
    |||||| |  |||||||  ||||||||||    
T  4629823 cacgagaattaaaagtgcaattaagccta 4629795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 194
Target Start/End: Complemental strand, 10918264 - 10918124
Alignment:
Q  54 ttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtg 153  Q
    ||||| ||| ||||||||||||||| ||  ||||||||||||||||||||| ||||| |||  ||||| ||||||||||    ||| ||||| |||||||    
T  10918264 tttttggaggataaaatggggggtatgatgaaaaatgcaacaaaaatgatatttgaaggacaattttgctctgttttaaggaggcaagaccaatttcgtg 10918165  T
Q  154 agtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||   |||||||||||||| |||| ||| ||||| ||||    
T  10918164 agtagatcaaaacacgaggacaaaaaatgtaattaaaccta 10918124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 181
Target Start/End: Original strand, 8073951 - 8074085
Alignment:
Q  46 tatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggacca 145  Q
    |||| |||||||| |||  ||||||||||| |  |||  |||||||||||||| ||||||||||| ||   |||||||||||||||||||  || || ||    
T  8073951 tatcagcgtttttggagggtaaaatgggggttttgacgtaaaatgcaacaaaa-tgataattgaaggatgattttgttctgttttaaaaggacatgatca 8074049  T
Q  146 gtttcgtgagtatgccaaaacacgaggaccaaaagt 181  Q
     |||||||| || |||||||||||||||||||||||    
T  8074050 ttttcgtgaataggccaaaacacgaggaccaaaagt 8074085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 43958326 - 43958267
Alignment:
Q  51 gcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaa 110  Q
    |||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||||||    
T  43958326 gcgtttttggagaataaaatagagggtaggacgaaaaatgcaacaaaaatgataattgaa 43958267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 9177700 - 9177664
Alignment:
Q  159 gccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    ||||||||||||||||||||||||| |||||||||||    
T  9177700 gccaaaacacgaggaccaaaagtgtaattaagcctat 9177664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 4e-78; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 18257313 - 18257134
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  18257313 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 18257214  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18257213 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcctat 18257134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 20741276 - 20741098
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  20741276 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggacc 20741177  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
     ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  20741176 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20741098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 10900299 - 10900475
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  10900299 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10900398  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  10900399 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcc 10900475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 11276951 - 11277127
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  11276951 agcatagggggtaggtctaaaactgtcatttctcttcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 11277050  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  11277051 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 11277127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 15828010 - 15828187
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  15828010 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 15828109  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||| ||||||||||| | | ||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  15828110 gttttgttttgttttaaaagggtatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15828187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 28472812 - 28472635
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28472812 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 28472714  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
     ||||||||||||||||||  ||||||||| ||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  28472713 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagccta 28472635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 29860001 - 29859824
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  29860001 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 29859903  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
     ||||||||||||||||||  ||||||||| ||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  29859902 attttgttctgttttaaaatggcaggaccactttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagccta 29859824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 12935528 - 12935705
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgt 117  Q
    ||||||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  12935528 catagggggtaggtctaaaactgtcatttctctgtgtttatggagaataaaatggggggtaggacgaaaaatgtaacaaaaatgataattgaaggaccgt 12935627  T
Q  118 tttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    |||||||||||||| ||  ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  12935628 tttgttctgttttataaaggcaggaccagtttcgtgagtacgccaaaacacgaggaccaaaagtgtaattaagcctat 12935705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 11445163 - 11444985
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  11445163 agcatagggggtaggtctaaaactgtcatttctctgtgtttttagagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 11445064  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
     |||| |||||||||||| | |||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  11445063 attttattctgttttaaaggggcaggaccagcttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11444985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 1149802 - 1149977
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttg-agaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccg 116  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||    
T  1149802 catagggggtaggtctaaaactgtcatttctctgcgttttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatggtaattgaaggaccg 1149901  T
Q  117 ttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||||||| ||||||||| ||| |||||||||| |||||| || |||||||||||||||||||||| ||||||||    
T  1149902 ttttgttctattttaaaagggcatgaccagtttcatgagtaggctaaaacacgaggaccaaaagtgtaattaagcc 1149977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 31470685 - 31470860
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||| ||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  31470685 agcataaggggtagatctaaaattgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 31470784  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagc 191  Q
    |||||||||||||||||||| |||| |||||||||||||||| || ||||||| |||||||||||||| |||||||    
T  31470785 gttttgttctgttttaaaagggcagaaccagtttcgtgagtaggctaaaacacaaggaccaaaagtgtaattaagc 31470860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 2319832 - 2319670
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 131  Q
    |||||||| |||||| ||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2319832 ctaaaactatcatttctctgcgtttctggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttta 2319733  T
Q  132 aaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||| ||| ||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  2319732 aaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaagccta 2319670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 10900109 - 10899942
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttg 121  Q
    |||||||||||||||||||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  10900109 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 10900010  T
Q  122 ttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  10900009 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaa 10899942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 12935318 - 12935155
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  12935318 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 12935219  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  12935218 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 12935155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 16 - 191
Target Start/End: Original strand, 18505288 - 18505463
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||| ||| | |||||||||||||| ||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||     
T  18505288 agcataggggttagatttaaaactgtcatttctcttcgttgttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 18505387  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagc 191  Q
    |||||||| ||||||||||| |||||| ||||||||||||||  |||||||||||||||||||||| | |||||||    
T  18505388 gttttgttatgttttaaaagggcaggatcagtttcgtgagtagaccaaaacacgaggaccaaaagtataattaagc 18505463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 2322588 - 2322760
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||| ||||||||||||||||||| |||| |||||  |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||    
T  2322588 agcatagggggaaggtctaaaactgtcatttctctgtgttttg-gagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 2322686  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||||||||||||||||||  ||| ||| |||||||||||||  ||||||||||| |||||||||||| |||||    
T  2322687 gttttgttctgttttaaaaaggcaagactagtttcgtgagtagaccaaaacacgaagaccaaaagtgtaattaa 2322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 11445371 - 11445534
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  11445371 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 11445470  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  11445471 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 11445534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 23075512 - 23075676
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaataaaa-tggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||| ||||| |||  ||||| | || ||||| || ||||||||||||||||||||||||||| |||||||||||||||||||    
T  23075512 ctaaaactgtcatttctctgcatttttggagtttaaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 23075611  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  23075612 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctat 23075676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 22219737 - 22219900
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| |||| |||| | |||  | ||||| || ||||| || ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22219737 ctaaaactgtcatttctctgagtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22219836  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  22219837 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22219900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 29 - 192
Target Start/End: Complemental strand, 4811535 - 4811372
Alignment:
Q  29 ggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 128  Q
    ||||||||||||| ||||||||||||||||  |||||||||||||||||| ||| ||||||| ||||||||||||||||||| ||||||||| |||| ||    
T  4811535 ggtctaaaactgttatttatctgcgtttttgaagaataaaatggggggtaagacgaaaaatgaaacaaaaatgataattgaaggaccgttttattctatt 4811436  T
Q  129 ttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||||| ||| |||||||||||||||||  |||||| ||  ||||||||||||| ||||||||    
T  4811435 ttaaaagggcatgaccagtttcgtgagtagaccaaaatactgggaccaaaagtgtaattaagcc 4811372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 23074164 - 23073998
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||  ||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| |||||||           ||||||||| ||||    
T  23074164 agcatagaaggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatg-----------ataattgaaggacc 23074076  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  23074075 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 23073998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 31470476 - 31470314
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||| ||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  31470476 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaatgactgttttgttctgtttt 31470377  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||||||| ||||||||||||||||| ||||||||||||||| ||||||||| |||||||||    
T  31470376 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcct 31470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 18505045 - 18504922
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||| |||||||||||||||||||  ||||||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  18505045 aaaataggaggtaggacgaaaaatgaaacaaaaatgataattgaagaaccgttttgttctgttttaaaaaggcaggaccagtttcgtgagtaggccaaaa 18504946  T
Q  166 cacgaggaccaaaagtgttattaa 189  Q
    |||||||||||||||||| |||||    
T  18504945 cacgaggaccaaaagtgtaattaa 18504922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 18257565 - 18257682
Alignment:
Q  75 ggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggac 174  Q
    |||||||| ||||||| ||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  18257565 ggtaggacgaaaaatgtaacaaaaataataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggac 18257664  T
Q  175 caaaagtgttattaagcc 192  Q
    ||||||| | ||||||||    
T  18257665 caaaagtataattaagcc 18257682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 20741485 - 20741650
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaa---atgataattgaatgaccgttttgttctgt 127  Q
    |||||| |||||||| ||||||||| | |||  | ||||| || |||||||| |||||||||| ||||   |||||||||||| ||||||||||||||||    
T  20741485 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaaaaatgataattgaaggaccgttttgttctgt 20741584  T
Q  128 tttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||| |||||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  20741585 tttaaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaagagtgtaattaagcct 20741650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 11276760 - 11276589
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttg 121  Q
    |||||||| ||||||||||||||| ||||||||||| |||  | ||||| || |||||||| ||||||| ||||||||||| ||||||| |||| |||||    
T  11276760 ggggtaggcctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgaaacaaaaatgacaattgaaggaccattttg 11276661  T
Q  122 ttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||| | |||| ||||||| ||||||  |||||||||| |||| ||| |||| |||||||||    
T  11276660 ttctgttttaaaagggtaggatcagtttcatgagtagaccaaaacacgcggactaaacgtgtaattaagcct 11276589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 29033577 - 29033436
Alignment:
Q  50 tgcgttttttgag-aataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtt 148  Q
    ||||||||| ||| || ||||||||||||||||  |||  ||||||||||||||||| |||| ||| |||||||||||||||||||| ||||||||| ||    
T  29033577 tgcgtttttggaggaaaaaaatggggggtaggatgaaatgtgcaacaaaaatgataactgaaggacagttttgttctgttttaaaagggcaggaccaatt 29033478  T
Q  149 tcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    ||||||| | ||||||| ||||||||||||||||| ||||||    
T  29033477 tcgtgagcaggccaaaatacgaggaccaaaagtgtaattaag 29033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 15827766 - 15827639
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgt--tttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaa 163  Q
    ||||| || |||||||| ||||||||||||||||||||| ||||| ||||||  |||||| |||||||||||  ||| |||||||||||||||| |||||    
T  15827766 aaaataggaggtaggacgaaaaatgcaacaaaaatgatagttgaaggaccgtaatttgttatgttttaaaaggacagaaccagtttcgtgagtaagccaa 15827667  T
Q  164 aacacgaggaccaaaagtgttattaagc 191  Q
    |||||||||||||||||||| |||||||    
T  15827666 aacacgaggaccaaaagtgtaattaagc 15827639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 4811693 - 4811801
Alignment:
Q  84 aaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgt 183  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||  ||| || ||||||| |||||| ||||||||||||||| ||||||| |    
T  4811693 aaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaatgcatgatcagtttcatgagtaggccaaaacacgaggatcaaaagtat 4811792  T
Q  184 tattaagcc 192  Q
     ||||||||    
T  4811793 aattaagcc 4811801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 104 - 195
Target Start/End: Complemental strand, 1149553 - 1149462
Alignment:
Q  104 aattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    ||||||| |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  1149553 aattgaaggaccattttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcctat 1149462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 3835143 - 3835268
Alignment:
Q  64 ataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaa 163  Q
    ||||||||||||||||||| |||||||| ||||||||||||||| || |||  |||||||||||||||||   ||||||||| ||||||||||| | |||    
T  3835143 ataaaatggggggtaggacgaaaaatgccacaaaaatgataattaaaggacaattttgttctgttttaaagaggcaggaccattttcgtgagtaggtcaa 3835242  T
Q  164 aacacgaggaccaaaagtgttattaa 189  Q
    |||||  ||||||||||||| |||||    
T  3835243 aacacatggaccaaaagtgtaattaa 3835268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 29035040 - 29035180
Alignment:
Q  50 tgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagttt 149  Q
    ||||||||| ||| | ||||||| |||| |||| |||||||||||||||||||||| | || |||  ||||||||||||||||||| |||  |||| |||    
T  29035040 tgcgtttttggaggaaaaaatggagggtgggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttctgttttaaaagggcataaccaattt 29035139  T
Q  150 cgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    |||||||| || ||||||||||||| |||||||| ||||||    
T  29035140 cgtgagtaggctaaaacacgaggacgaaaagtgtaattaag 29035180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 51 - 194
Target Start/End: Complemental strand, 18296285 - 18296143
Alignment:
Q  51 gcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttc 150  Q
    |||||||| ||| |||||||||||| |||||| |||||||||||||||||||||| |||| ||| |||||||||||||||||||| |||  | || |||     
T  18296285 gcgtttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataaatgaaggacggttttgttctgttttaaaagggcaatatcaatttt 18296187  T
Q  151 gtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||||| | |||||||||||||| |||| | | ||||||||||    
T  18296186 gtgagtaagtcaaaacacgaggactaaaattataattaagccta 18296143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 35163557 - 35163639
Alignment:
Q  17 gcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaa 99  Q
    |||||||||||||| ||||||||||||||| |||| |||||| |||   ||||| || |||||||| |||| ||||| |||||    
T  35163557 gcatagggggtaggcctaaaactgtcatttctctgtgtttttggagttgaaaataggaggtaggactaaaactgcaaaaaaaa 35163639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 22534215 - 22534270
Alignment:
Q  137 gcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||||||| ||||||||||  | ||||| ||||||||||||||||| ||||||||    
T  22534215 gcaggaccattttcgtgagttggtcaaaatacgaggaccaaaagtgtaattaagcc 22534270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 2e-77; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 33109860 - 33109686
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  33109860 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 33109761  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  33109760 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaaatgtaattaag 33109686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 12234505 - 12234327
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12234505 agcatagggggtaggtttaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 12234406  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||    
T  12234405 gttttgttctgttttaaaagggcaggaccagtttcgtgaataagccaaaacaagaggaccaaaagtgtaattaagccta 12234327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 22 - 194
Target Start/End: Original strand, 25447611 - 25447783
Alignment:
Q  22 gggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttg 121  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  25447611 gggggtaggtctaaaactgtaatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttg 25447710  T
Q  122 ttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  25447711 ttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagccta 25447783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 25937846 - 25937668
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||    
T  25937846 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 25937747  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||||    
T  25937746 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggctaaaacacgaggaccaaaaatgtaattaagccta 25937668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 46193774 - 46193948
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||||||||||||||||| || ||| ||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||    
T  46193774 agcatagggggtaggtctaaaactgtcaattctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 46193873  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||    
T  46193874 gttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 46193948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 11153516 - 11153692
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||| |||||||||||| |||| ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| || |    
T  11153516 agcatagggggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggagggtaggacgaaaaatgcaacaaaaatgataattgaaggaac 11153615  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  11153616 gttttgttctgttttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 11153692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 22434547 - 22434723
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  22434547 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22434645  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||||||||| |||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||| ||||| ||||    
T  22434646 gttttgttctg-tttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaaaccta 22434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 15523603 - 15523780
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  15523603 agcatagggggtaggtctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 15523702  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
     ||||||| ||||||||||| |||||||||||||||||||||  ||||||||||| |||||||||||| |||||||||    
T  15523703 attttgttttgttttaaaagggcaggaccagtttcgtgagtagcccaaaacacgatgaccaaaagtgtaattaagcct 15523780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 22170306 - 22170482
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22170306 agcatagggggtacgtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 22170405  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||| ||||||||||  |||||| || |||||| |||| | ||||||||||||||||||||||| |||||||||    
T  22170406 gttttgttttgttttaaaaaggcagga-caatttcgtcagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 22170482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 23 - 195
Target Start/End: Original strand, 38962195 - 38962367
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgt 122  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  38962195 ggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 38962294  T
Q  123 tctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    ||||||||||||| || ||||||||||||||| ||  |||||||||||||||||||| ||| |||||| ||||    
T  38962295 tctgttttaaaagggccggaccagtttcgtgaatagaccaaaacacgaggaccaaaaatgtaattaagtctat 38962367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 4219733 - 4219559
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||     
T  4219733 agcataggggataggtttaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 4219634  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    |||||||| | ||||||||  ||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  4219633 gttttgttttattttaaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 4219559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 23494619 - 23494445
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||| | |||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||    
T  23494619 agcatatgaggtaggtctaaaactgtcatttctctgcgtgtttggagaataaaatggggggtaggacgaaaaatgcaataaaaatgataattgaaggacc 23494520  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    | |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  23494519 gctttgttctgttttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaaatgtaattaag 23494445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 51020973 - 51020795
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||| |||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||| || |    
T  51020973 agcatagggggtaggtctaaaactgtcatttctctacgtttttgaagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggatc 51020874  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| ||||||||||||| |||| |  ||||||||| ||||| ||||||||| ||||||||||    
T  51020873 gttttgttctgttttaaaagggcaggaccagtttagtgaattagccaaaacatgaggatcaaaagtgtaattaagccta 51020795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 48526371 - 48526195
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||| |||||||||||||||| ||||| ||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  48526371 agcatagggggtagatctaaaactgtcatttctctgcatttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 48526273  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||||||||| ||||  |||||||| |||||| | ||||||||||| ||||||||||| |||||||||    
T  48526272 gttttgttctgttttaaaagggcagagccagtttcatgagtaggtcaaaacacgagaaccaaaagtgtaattaagcct 48526195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 2118665 - 2118837
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  2118665 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaatgacc 2118763  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||||||| |||||||||||   |||||||||||| |||| | |||||||||||| |||||||||||| |||||    
T  2118764 gttttgttatgttttaaaaggataggaccagtttcatgagcaggccaaaacacgaagaccaaaagtgtaattaa 2118837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 54995437 - 54995614
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||| ||||||||||||||| |||||| | ||||||||| |||||||||||||||| |||||| ||||||||||||||| ||||| ||||| ||||    
T  54995437 agcataggtggtaggtctaaaactatcatttctttgcgtttttagagaataaaatgggggttaggacgaaaaatgcaacaaaa-tgatacttgaaggacc 54995535  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||| ||||||||| ||| || |||||||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  54995536 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 54995614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 22434340 - 22434179
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||| |||||| |||||||||||||||||||| |||||||||||||||||||    
T  22434340 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgtttt 22434241  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22434240 aaaagggcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcc 22434179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 45082808 - 45082969
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  45082808 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 45082907  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  45082908 aaaagggcatgaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcc 45082969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 4219943 - 4220106
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||||||| |||| |||||||||||  ||  | ||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  4219943 ctaaaactgttatttctctgcgtttttgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtttt 4220042  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  4220043 aaaagagcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 4220106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 33 - 195
Target Start/End: Complemental strand, 15523395 - 15523232
Alignment:
Q  33 taaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 131  Q
    |||||||||||||| ||||||||| | |||  | ||||| || |||||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  15523395 taaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaaaatgcaaaaaaaataataattgaaggaccgttttgttctgtttta 15523296  T
Q  132 aaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  15523295 aaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctat 15523232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 30 - 192
Target Start/End: Complemental strand, 46193568 - 46193405
Alignment:
Q  30 gtctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 128  Q
    ||||||||||||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||| ||||||||||||    
T  46193568 gtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacctttttgttctgtt 46193469  T
Q  129 ttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  46193468 ttaaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 46193405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 76 - 194
Target Start/End: Original strand, 23494872 - 23494990
Alignment:
Q  76 gtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacc 175  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  23494872 gtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggacc 23494971  T
Q  176 aaaagtgttattaagccta 194  Q
    |||||||| ||||||||||    
T  23494972 aaaagtgtaattaagccta 23494990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 45082606 - 45082430
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||||||||||| |||||||| |||| |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  45082606 agcatagggggtaggtctaaaattgtcatttctctgtgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 45082508  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||| ||||||||| |||  ||||| ||||||||||  ||||||||||| ||||||||| || ||||| ||||    
T  45082507 gttttgttctattttaaaagggcaaaaccag-ttcgtgagtagaccaaaacacgatgaccaaaagcgtaattaaaccta 45082430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 25447408 - 25447247
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||| |||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  25447408 ctaaaattgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 25447309  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||    
T  25447308 aaaagggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25447247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 20470895 - 20471058
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||||| |||||| ||||||||| | |||  | ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20470895 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 20470994  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| | | |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  20470995 aaaagggaatgaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20471058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 66 - 198
Target Start/End: Original strand, 33109883 - 33110015
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||| | |||||||    
T  33109883 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccaatttcgtgagcaggccaaaa 33109982  T
Q  166 cacgaggaccaaaagtgttattaagcctattct 198  Q
    || ||||||||||||||| ||||||||||||||    
T  33109983 catgaggaccaaaagtgtaattaagcctattct 33110015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 25938090 - 25938217
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  25938090 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 25938189  T
Q  166 cacgaggaccaaaagtgttattaagcct 193  Q
    ||| |||||||||||||| |||||||||    
T  25938190 cacaaggaccaaaagtgtaattaagcct 25938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 12234748 - 12234874
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| || |||||||||||||| |||||||    
T  12234748 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgatcagtttcgtgagtaggccaaaa 12234847  T
Q  166 cacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||||| | ||||||||    
T  12234848 cacgaggaccaaaagtataattaagcc 12234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 54995195 - 54995065
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||||||| ||||| |    
T  54995195 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggtaggactagtttcgtgagtaggccaata 54995096  T
Q  166 cacgaggaccaaaagtgttattaagcctatt 196  Q
    |||||||||||||||||| ||||| ||||||    
T  54995095 cacgaggaccaaaagtgtaattaaacctatt 54995065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 12503805 - 12503913
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||    
T  12503805 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 12503904  T
Q  116 gttttgttc 124  Q
    |||||||||    
T  12503905 gttttgttc 12503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 48526565 - 48526715
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| |||| |||| | |||  | ||||| || |||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  48526565 ctaaaactgtcatttctctgtgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaagtgataattgaaggaccgttttgttctgtttt 48526664  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagt 181  Q
    ||||| ||| |||||||||||||||||  ||||||||||||||||||||||    
T  48526665 aaaagggcaagaccagtttcgtgagtagaccaaaacacgaggaccaaaagt 48526715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 78 - 190
Target Start/End: Original strand, 18763951 - 18764063
Alignment:
Q  78 aggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaa 177  Q
    ||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||  || ||||||||||||||||| |||||||||||||||||||    
T  18763951 aggacgaaaaatgcaacaaaaatgatacttgaatgaccattttgttctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggaccaa 18764050  T
Q  178 aagtgttattaag 190  Q
    |||||| ||||||    
T  18764051 aagtgtaattaag 18764063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 11153307 - 11153145
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | | |  | ||||| || |||||||| ||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  11153307 ctaaaactgtcatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttattctatttt 11153208  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||| ||| ||||| ||| ||||||| ||||||||||||||||||||||| | |||||||||    
T  11153207 aaaagggcatgaccaattttgtgagtaggccaaaacacgaggaccaaaagtataattaagcct 11153145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 189
Target Start/End: Complemental strand, 18751760 - 18751602
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||| ||||| ||||||||| | |||  | ||||| || ||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  18751760 ctaaaactgccatttttctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgatatttgaaggaccgttttgttctgtttt 18751661  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    ||||| ||| |||||||||  |||||| ||||||||||||||||||||||||| |||||    
T  18751660 aaaagggcatgaccagttttatgagtaggccaaaacacgaggaccaaaagtgtaattaa 18751602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 35363028 - 35363146
Alignment:
Q  75 ggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt-aaaagagcaggaccagtttcgtgagtatgccaaaacacgagga 173  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||| |||||||||||||||| |||||||||||||||    
T  35363028 ggtagaacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttttttttttaaaagagcagaaccagtttcgtgagtaggccaaaacacgagga 35363127  T
Q  174 ccaaaagtgttattaagcc 192  Q
     ||||||||| ||||||||    
T  35363128 tcaaaagtgtaattaagcc 35363146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 66 - 196
Target Start/End: Original strand, 51021215 - 51021344
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||| |||||||| || |||||||||||| ||||||||||| ||||||||| ||||||||||| |||||||    
T  51021215 aaaataggaggtaggacgaaaaatgcaacaaaa-tgataattaaaggaccgttttgttgtgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 51021313  T
Q  166 cacgaggaccaaaagtgttattaagcctatt 196  Q
    |||||||| ||||||||| ||||||||||||    
T  51021314 cacgaggatcaaaagtgtaattaagcctatt 51021344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 20958264 - 20958403
Alignment:
Q  50 tgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagttt 149  Q
    ||||||||| ||| |||||||||||| |||||| ||||||||||||||||||||||||||| |||   |||||||||||||||||| ||||||||| |||    
T  20958264 tgcgtttttggaggataaaatggggg-taggac-aaaaatgcaacaaaaatgataattgaaggacatatttgttctgttttaaaagggcaggaccatttt 20958361  T
Q  150 cgtgagtatgccaaaacacgaggaccaaaagtgttattaagc 191  Q
    |||||||| ||||||| |||||||| |||||||| |||||||    
T  20958362 cgtgagtaggccaaaatacgaggactaaaagtgtaattaagc 20958403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 2118419 - 2118295
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| |||  ||||||| ||||||||||| ||||||||| ||||||||||| |||||||    
T  2118419 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggactattttgttatgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 2118320  T
Q  166 cacgaggaccaaaagtgttattaag 190  Q
    ||| |||||||||||||| ||||||    
T  2118319 cacaaggaccaaaagtgtaattaag 2118295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 48713749 - 48713895
Alignment:
Q  50 tgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagttt 149  Q
    ||||||||| ||| ||||||||| ||| ||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||||||| ||||| |||    
T  48713749 tgcgtttttggaggataaaatggaggggaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaagagcatgaccatttt 48713848  T
Q  150 cgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    | |||||| || |||||||||| |  |||||||| ||||| ||||||    
T  48713849 catgagtaggctaaaacacgagaattaaaagtgtaattaaacctatt 48713895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 54 - 179
Target Start/End: Complemental strand, 20957327 - 20957202
Alignment:
Q  54 ttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtg 153  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||| ||||||||||| |||  ||||||| ||||||||||||| | ||||| |||||||    
T  20957327 ttttttgagaataaaatggggagtatgacgaaaaatgcaacaaaattgataattgaaggacaattttgttgtgttttaaaagagtatgaccattttcgtg 20957228  T
Q  154 agtatgccaaaacacgaggaccaaaa 179  Q
    |||| |||||||| ||||||||||||    
T  20957227 agtaagccaaaactcgaggaccaaaa 20957202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 44892547 - 44892680
Alignment:
Q  46 tatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggacca 145  Q
    |||| |||||||| ||| ||||||||| ||||||||| ||||||||||||||||  ||||||||| ||| |||||||||||||||||||  |||| ||||    
T  44892547 tatcagcgtttttggaggataaaatggagggtaggacgaaaaatgcaacaaaaaatataattgaaagacagttttgttctgttttaaaatggcagaacca 44892646  T
Q  146 gtttcgtgagtatgccaaaacacgaggaccaaaa 179  Q
     ||||||||||| | |||||||||||||||||||    
T  44892647 ttttcgtgagtaggtcaaaacacgaggaccaaaa 44892680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 51 - 195
Target Start/End: Complemental strand, 48293735 - 48293591
Alignment:
Q  51 gcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaa-agagcaggaccagttt 149  Q
    |||||||| ||||||||||||| ||| ||||  |||||||||||||||||||||||||||  ||  ||||||| ||||||||| ||| ||||| || |||    
T  48293735 gcgtttttggagaataaaatggagggcaggatgaaaaatgcaacaaaaatgataattgaagaacaattttgttttgttttaaagaga-caggatcaattt 48293637  T
Q  150 cgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||    
T  48293636 cgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcctat 48293591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 43243685 - 43243807
Alignment:
Q  51 gcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttc 150  Q
    |||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||||||||  ||  ||||||||||||||||||| ||| ||||| ||||    
T  43243685 gcgtttttggaggataaaatgggg-gtaggacaaaaaatgcaacaaaaatgataattgaagaacaattttgttctgttttaaaagggcatgaccattttc 43243783  T
Q  151 gtgagtatgccaaaacacgaggac 174  Q
    ||||||| ||||||||||||||||    
T  43243784 gtgagtaggccaaaacacgaggac 43243807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 43281198 - 43281317
Alignment:
Q  54 ttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtg 153  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||  ||  ||||||||||||||||||  ||| ||||| |||||||    
T  43281198 ttttttgaggataaaatggggggtaggacgaaaaatgcaacaaaaat-ataattgaagaacatttttgttctgttttaaaatggcatgaccattttcgtg 43281296  T
Q  154 agtatgccaaaacacgaggac 174  Q
    |||| ||||||||||||||||    
T  43281297 agtaggccaaaacacgaggac 43281317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 64 - 197
Target Start/End: Complemental strand, 48708423 - 48708290
Alignment:
Q  64 ataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaa 163  Q
    |||||||| | |||||||  | ||||||||||||||||||||||||| ||| |||||||| ||||||||||| |||||| || |||||||  || |||||    
T  48708423 ataaaatgagtggtaggattataaatgcaacaaaaatgataattgaaggacagttttgttgtgttttaaaagggcaggatcattttcgtggttaggccaa 48708324  T
Q  164 aacacgaggaccaaaagtgttattaagcctattc 197  Q
    |||||  ||||||||||||| |||||||||||||    
T  48708323 aacacatggaccaaaagtgtaattaagcctattc 48708290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 12503597 - 12503453
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||||||| |||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||  ||||||||||||||    
T  12503597 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 12503498  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacc 175  Q
    ||||  || ||| |||||||||||||| | |||||||||||||||    
T  12503497 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 12503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 10258306 - 10258433
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| ||||||| ||| |||| ||||||||||||||||||||||  ||  ||||  ||||||||||||| ||||||||| |||| |||||| |||| ||    
T  10258306 aaaatagggggtaagactaaaactgcaacaaaaatgataattgaaaaacaattttaatctgttttaaaagggcaggaccaatttcctgagtaggccacaa 10258405  T
Q  166 cacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||||||| |||||||||    
T  10258406 cacgaggaccaaaagtgtaattaagcct 10258433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 48294946 - 48295088
Alignment:
Q  51 gcgttttttgagaataaaatggggggtaggacc-aaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagttt 149  Q
    |||||||| ||  |||||||||||||||||||  |||||||||||||||||||||||||||||||  ||||||| |||||||||   ||| ||||| |||    
T  48294946 gcgtttttggaagataaaatggggggtaggacggaaaaatgcaacaaaaatgataattgaatgacaattttgttgtgttttaaagaggcaagaccaattt 48295045  T
Q  150 cgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||||||   |||||||||| |||||||| ||| ||||||||    
T  48295046 cgtgagtagatcaaaacacgatgaccaaaaatgtaattaagcc 48295088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 46 - 191
Target Start/End: Complemental strand, 44890663 - 44890518
Alignment:
Q  46 tatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggacca 145  Q
    |||| |||||||||||| ||||||||||||||| ||  ||||||||||||||||  |||||| || ||   ||||||||||||||||||| ||| |||||    
T  44890663 tatcagcgttttttgaggataaaatggggggtatgatgaaaaatgcaacaaaaaatataattaaaggatatttttgttctgttttaaaagggcatgacca 44890564  T
Q  146 gtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagc 191  Q
     |||||||| || | |||||||| |||||||||| ||| |||||||    
T  44890563 ttttcgtgaataggtcaaaacacaaggaccaaaattgtaattaagc 44890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 189
Target Start/End: Complemental strand, 16691064 - 16690939
Alignment:
Q  64 ataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaa 163  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||| ||   ||||||| |||||||||   ||||||||| |||||||||||   |||    
T  16691064 ataaaatcgggggtaggacgaaaaatgcaacaaaaatgataattgaaggataattttgttttgttttaaagaggcaggaccattttcgtgagtagatcaa 16690965  T
Q  164 aacacgaggaccaaaagtgttattaa 189  Q
    ||||| |||||||||| ||| |||||    
T  16690964 aacacaaggaccaaaaatgtaattaa 16690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 43242416 - 43242328
Alignment:
Q  46 tatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaa 134  Q
    |||| |||||||| ||  ||||||| || |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43242416 tatcagcgtttttggatgataaaattggaggtaggacgaaaaatgcaaaaaaaatgataattgaatgaccgttttgttctgttttaaaa 43242328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 122 - 193
Target Start/End: Original strand, 16318251 - 16318322
Alignment:
Q  122 ttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||| |||||| |||||| ||||||| ||||||||||||||||||||||||| |||||||||    
T  16318251 ttctgttttaaaagggcaggatcagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 16318322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 64 - 192
Target Start/End: Original strand, 16691489 - 16691616
Alignment:
Q  64 ataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaa 163  Q
    |||||||||| |||| ||| ||||||||||||||||| |||||| || |||  ||||||| ||||| || || ||||||||| ||||||||||| | |||    
T  16691489 ataaaatgggaggtatgacgaaaaatgcaacaaaaataataattaaaggacaattttgttatgtttaaagag-gcaggaccattttcgtgagtaggtcaa 16691587  T
Q  164 aacacgaggaccaaaagtgttattaagcc 192  Q
    |||||  ||| ||||||||| ||||||||    
T  16691588 aacacagggatcaaaagtgtaattaagcc 16691616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 18751971 - 18752037
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggac 82  Q
    |||||||||||||||||||||||||| |||| ||||| ||||| ||||||||||| |||||||||||    
T  18751971 agcatagggggtaggtctaaaactgttatttctctgcatttttggagaataaaatagggggtaggac 18752037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 17504149 - 17504061
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgata 104  Q
    ||||||||||||||||||||||||||||||| ||| ||||| | |||   ||||| || |||||||| |||| ||||| ||| ||||||    
T  17504149 agcatagggggtaggtctaaaactgtcatttctctacgtttctggagttgaaaataggaggtaggactaaaactgcaaaaaacatgata 17504061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 17504329 - 17504369
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttt 56  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  17504329 agcatagggggtaggtctaaaactgtcatttctctgcgttt 17504369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 65 - 192
Target Start/End: Original strand, 30597939 - 30598065
Alignment:
Q  65 taaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagag-caggaccagtttcgtgagtatgccaa 163  Q
    |||||| |||| ||||||||||| |||||||||||| |||||| |  |||  |||||||| | |||||||||| ||| |||| || |||||||  | |||    
T  30597939 taaaataggggttaggaccaaaagtgcaacaaaaat-ataatttagggacgattttgttc-gatttaaaagagacagaaccaattccgtgagttggtcaa 30598036  T
Q  164 aacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||||||||| || |||||    
T  30598037 aacacgaggaccaaaagtgtaatcaagcc 30598065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 35193483 - 35193443
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttt 56  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  35193483 agcatagggggtaggtctaaaactgtcatttctctgcgttt 35193443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 44220781 - 44220861
Alignment:
Q  51 gcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 131  Q
    |||||||| ||| |||||||  ||||||| || ||||||| |||||||||||||| |||| |||  |||||||||||||||    
T  44220781 gcgtttttggaggataaaattaggggtagaacgaaaaatgaaacaaaaatgataaatgaaggacaattttgttctgtttta 44220861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 192
Target Start/End: Complemental strand, 55189636 - 55189528
Alignment:
Q  84 aaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgt 183  Q
    ||||||| | ||||||||||||||||| |||  ||||||||| ||||||||| |||  |||| |||  ||| || | ||||||||||||| ||||| | |    
T  55189636 aaaaatgtagcaaaaatgataattgaaagacaattttgttctattttaaaagggcataaccatttttatgaataggtcaaaacacgaggatcaaaaatat 55189537  T
Q  184 tattaagcc 192  Q
     ||||||||    
T  55189536 aattaagcc 55189528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 46
Target Start/End: Complemental strand, 40160269 - 40160239
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcattt 46  Q
    |||||||||||||||||||||||||||||||    
T  40160269 agcatagggggtaggtctaaaactgtcattt 40160239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 6e-77; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 50970647 - 50970824
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  50970647 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 50970746  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||    
T  50970747 gttttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagcct 50970824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 29869796 - 29869619
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||    
T  29869796 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggtgtaggacgaaaaatgcaacaaaaataataattgaaggacc 29869697  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29869696 gttttgttctgttttaaaagggcaagaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtaattaagcct 29869619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 18984295 - 18984116
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  18984295 agcataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18984196  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  18984195 gttttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcctat 18984116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 5540194 - 5540364
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgt 122  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |    
T  5540194 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttct 5540293  T
Q  123 tctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  5540294 tctgttttaaaaggacaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 5540364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 15646571 - 15646741
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgt 122  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  15646571 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 15646670  T
Q  123 tctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||||||||||| | |||| |||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  15646671 tctgttttaaaagggtaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 15646741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 33144288 - 33144462
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| | ||    
T  33144288 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatatttgaaggtcc 33144387  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
     ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  33144388 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 33144462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 5962947 - 5963120
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||     
T  5962947 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaagact 5963046  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||||||||| ||||||||| ||| || |||||||||||||| ||||||||||||||||||||||||| |||||    
T  5963047 gttttgttctattttaaaagggcatgatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 5963120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 15173272 - 15173099
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  15173272 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagaacc 15173173  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||||||||  ||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| |||||    
T  15173172 gttttgttcaattttaaaagggcaggactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaa 15173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 23 - 192
Target Start/End: Complemental strand, 29307122 - 29306953
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgt 122  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  29307122 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 29307023  T
Q  123 tctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||  || ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  29307022 tctgttttaaaaggacatgaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagcc 29306953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 8678911 - 8679086
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| || |||||| ||||||||||||||||||||||||||||||||    
T  8678911 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggagg-taggacgaaaaatgcaacaaaaatgataattgaatgacc 8679009  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
     ||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||    
T  8679010 tttttgttctgttttaaaagggcaggaccagttccgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8679086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 9019149 - 9018971
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||| ||||||| | | |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  9019149 agcatagggggtagatctaaaaatataatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatagttgaatgacc 9019050  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  9019049 gttttgttctgttttaaaagggcagaaccagtttcgttagtaggccaaaacacgaggaccaaaagtgtaattaagccta 9018971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 21856412 - 21856588
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||| ||||| ||||    
T  21856412 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggagtaggacgaaaaatgcagcaaaaatgatacttgaaggacc 21856511  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||||||||  |||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||    
T  21856512 gttttgttctgttttaaaaaggcaggatcagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 21856588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 17433392 - 17433216
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| ||||| ||||    
T  17433392 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggatgaaaaatgcaacaaaaatgatacttgaaggacc 17433293  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||||||||| ||| |  ||||||| |||||| ||||||||| ||||||||||||||| ||||||||    
T  17433292 gttttgttctgttttaaaagggcatggtcagtttcatgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 17433216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 39154195 - 39154016
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||| | |||||||||||||||||| | ||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||||    
T  39154195 agcataggggatgggtctaaaactgtcatttctatgcgtttttggagaatagaatggggggtaggacgaaaaatgcaacaaaaatgataattgcaggacc 39154096  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    |||||||||||||||||||| ||| || |||||||||||||||||||||||| || |||||||||||| |||||| ||||    
T  39154095 gttttgttctgttttaaaagggcatgatcagtttcgtgagtatgccaaaacatgatgaccaaaagtgtaattaagtctat 39154016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 195
Target Start/End: Original strand, 26859431 - 26859607
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgt 117  Q
    |||||| ||||||||||||||| | |||| ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  26859431 cataggaggtaggtctaaaactattatttctctgcgtttttggagaataaa-tggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 26859529  T
Q  118 tttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
     ||||||||||||||||| ||||||  |||||||||||||  |||||||||||||| ||||||||| |||||||||||    
T  26859530 attgttctgttttaaaagggcaggattagtttcgtgagtagcccaaaacacgaggatcaaaagtgtaattaagcctat 26859607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 29307317 - 29307487
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttg 121  Q
    |||||||||||||||||||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  29307317 ggggtaggtctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 29307416  T
Q  122 ttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||  ||||||||    
T  29307417 ttctgttttaaaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgcaattaagcc 29307487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 34 - 198
Target Start/End: Complemental strand, 50970437 - 50970272
Alignment:
Q  34 aaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaa 132  Q
    ||||||||||||| ||||||||| | |||  | ||||| |  |||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  50970437 aaaactgtcatttctctgcgtttctggagtttgaaaatagaaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgatttaa 50970338  T
Q  133 aagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctattct 198  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  50970337 aagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctattct 50970272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 15173478 - 15173642
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  15173478 ctaaaactgtcatttctctgcgtttatagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 15173577  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||    
T  15173578 aaaag-gcaggaccagttttgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctatt 15173642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 30 - 196
Target Start/End: Original strand, 17433597 - 17433764
Alignment:
Q  30 gtctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 128  Q
    ||||||||||||||||| ||||||||| |  ||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  17433597 gtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtt 17433696  T
Q  129 ttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    ||||||| ||| ||||||||||||||||| |||| |||||||||||||||||||| |||||| |||||    
T  17433697 ttaaaagggcatgaccagtttcgtgagtaggccagaacacgaggaccaaaagtgtaattaagtctatt 17433764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 39154439 - 39154566
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  39154439 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttatgttttaaaagagcaggaccagtttcgtgagtaggccaaaa 39154538  T
Q  166 cacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||||||| |||||||||    
T  39154539 cacgaggaccaaaagtgtaattaagcct 39154566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 75 - 196
Target Start/End: Complemental strand, 8678658 - 8678537
Alignment:
Q  75 ggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggac 174  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  8678658 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggac 8678559  T
Q  175 caaaagtgttattaagcctatt 196  Q
    ||||||||| ||||||| ||||    
T  8678558 caaaagtgtaattaagcatatt 8678537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 29870003 - 29870164
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| |  ||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  29870003 ctaaaactgtcatttctctgcgtttctaaagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 29870102  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||  |||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||    
T  29870103 aaaatggcaggaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 29870164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 9019338 - 9019510
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttg 121  Q
    |||| |||||||||||||| |||| ||||||||| | | |  | ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||    
T  9019338 ggggcaggtctaaaactgttatttctctgcgtttctggggtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttg 9019437  T
Q  122 ttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||  |||| |||||||| ||||||| | ||||||||||||||||||||||| ||||||||||    
T  9019438 ttctgttttaaaatggcagaaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 9019510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 33144078 - 33143926
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||| ||| |||||| |||||||||||||||| |||||||||||||||||||    
T  33144078 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggacgaaatatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 33143979  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgt 183  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  33143978 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgt 33143926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 18984538 - 18984665
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  18984538 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 18984637  T
Q  166 cacgaggaccaaaagtgttattaagcct 193  Q
    ||| |||||||||||||| |||||||||    
T  18984638 cacaaggaccaaaagtgtaattaagcct 18984665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 66 - 196
Target Start/End: Complemental strand, 5539942 - 5539812
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  5539942 aaaataggaggtaggacgaaaaatacaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 5539843  T
Q  166 cacgaggaccaaaagtgttattaagcctatt 196  Q
    |||||||||||||||||| ||||||| ||||    
T  5539842 cacgaggaccaaaagtgtaattaagcatatt 5539812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 52 - 193
Target Start/End: Complemental strand, 52268430 - 52268289
Alignment:
Q  52 cgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcg 151  Q
    ||||||| ||| | ||||||||||||||||| |||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||| |||||    
T  52268430 cgtttttggaggaaaaaatggggggtaggacgaaaagtgcaacaaaaatgataactgaatgacagttttgttctgttttaaaagggcaggaccaatttcg 52268331  T
Q  152 tgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||| | ||||||| ||||||||||||||||| |||||||||    
T  52268330 tgagcaggccaaaatacgaggaccaaaagtgtaattaagcct 52268289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 191
Target Start/End: Original strand, 4636356 - 4636515
Alignment:
Q  33 taaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 131  Q
    ||||| |||||||| ||||||||| | |||  | ||||| || ||| |||| ||||||||||||||||||||||||||| || |||||||||||||||||    
T  4636356 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaggatcgttttgttctgtttta 4636455  T
Q  132 aaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagc 191  Q
    |||| |||||| |||||||||||||| ||||||||||||||||||||||||| |||||||    
T  4636456 aaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagc 4636515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 190
Target Start/End: Complemental strand, 21856203 - 21856044
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || | |||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  21856203 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 21856104  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    ||||| |||||||||||||||||||||   ||||||||||||||||||||||| ||||||    
T  21856103 aaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaag 21856044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 75 - 192
Target Start/End: Complemental strand, 26859176 - 26859059
Alignment:
Q  75 ggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggac 174  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||| |||| |||||||||| |||||    
T  26859176 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatggcaggaccagtttcgttagtaggccaaaacacaaggac 26859077  T
Q  175 caaaagtgttattaagcc 192  Q
    ||||||||| ||||||||    
T  26859076 caaaagtgtaattaagcc 26859059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 15646309 - 15646190
Alignment:
Q  75 ggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggac 174  Q
    |||||||| |||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||    
T  15646309 ggtaggacgaaaaatgcaacaaaaatgataattgaagtaccattttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggac 15646210  T
Q  175 caaaagtgttattaagccta 194  Q
    ||||||| | ||||||||||    
T  15646209 caaaagtataattaagccta 15646190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 4636146 - 4636033
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgt 117  Q
    ||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||| || ||||||||||||||||||||| ||||| |||||     
T  4636146 catagggggtaggtctaaaactgtcatttctctgcgtttttgaagaataaaatggggggtagaacaaaaaatgcaacaaaaatgatacttgaaggaccg- 4636048  T
Q  118 tttgttctgttttaa 132  Q
    |||||||||||||||    
T  4636047 tttgttctgttttaa 4636033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 5962704 - 5962579
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || ||||| || ||||||||||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||||||||| ||  ||| ||    
T  5962704 aaaataggaggtagaacgaaaaatgcaacaaaaatgatagttgaaagaccgttttgttctgttttaaaagggccggaccagtttcgtgaatagaccataa 5962605  T
Q  166 cacgaggaccaaaagtgttattaagc 191  Q
    |||||||||||||| ||| |||||||    
T  5962604 cacgaggaccaaaaatgtaattaagc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 52269177 - 52269291
Alignment:
Q  76 gtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacc 175  Q
    ||||||| |||| ||||||||||||||||| ||||||||  ||||||||||||||||||| |||| |||  |||| |||||| | |||||||||||||||    
T  52269177 gtaggacgaaaagtgcaacaaaaatgataactgaatgacatttttgttctgttttaaaagggcagaaccgatttcatgagtaagtcaaaacacgaggacc 52269276  T
Q  176 aaaagtgttattaag 190  Q
    |||||||| ||||||    
T  52269277 aaaagtgtaattaag 52269291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 2733416 - 2733504
Alignment:
Q  106 ttgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||| || || |||||||||| |||||||||||| | ||||||||||    
T  2733416 ttgaaggaccgttttgttctgttttaaaagggcaggaccaatttcgcgaataggccaaaacacaaggaccaaaagtataattaagccta 2733504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 192
Target Start/End: Original strand, 47827033 - 47827132
Alignment:
Q  92 aacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagc 191  Q
    |||||||||||||||| || |||  ||||||||||||||||||| ||| ||||| ||||||||||| ||||||||| |  || |||||||| ||||||||    
T  47827033 aacaaaaatgataattaaaggacaattttgttctgttttaaaagggcatgaccattttcgtgagtaggccaaaacaaggagatcaaaagtg-tattaagc 47827131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 17112442 - 17112282
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||||| |||||| ||||||||| | |||  | ||||| || |||||||| |||||||||| |||||||||||||||| |||  |||| |||| ||||    
T  17112442 ctaaaactatcatttttctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaataaaaatgataattgaaggactattttattctatttt 17112343  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||| ||   |||| |||| ||||||   ||||||| ||| ||||||||||| ||||||||    
T  17112342 aaaagggc-ctaccaatttcatgagtagatcaaaacatgagaaccaaaagtgtaattaagcc 17112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 47827039 - 47826966
Alignment:
Q  117 ttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    ||||||| | ||||||||| ||| ||||| |||||||||||  |||||||||||||||||||||||| ||||||    
T  47827039 ttttgttatattttaaaagggcatgaccattttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaag 47826966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 17088516 - 17088550
Alignment:
Q  22 gggggtaggtctaaaactgtcatttatctgcgttt 56  Q
    ||||||||||||||||||||||||| |||||||||    
T  17088516 gggggtaggtctaaaactgtcatttctctgcgttt 17088550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 2865124 - 2865304
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  2865124 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgaaacaaaaatgataattgaaggacc 2865223  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  2865224 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctatt 2865304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 5819298 - 5819474
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||| |||||||||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5819298 agcatagggggtagatctaaaactgtcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaatgacc 5819397  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  5819398 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 5819474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 18183338 - 18183516
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||    
T  18183338 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatgaggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 18183437  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  18183438 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 18183516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 8647614 - 8647438
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  8647614 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 8647515  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
     ||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  8647514 attttgttctgttttaaaacggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 8647438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 19359312 - 19359136
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  19359312 agcatagggggtaggtctagaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 19359213  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  19359212 gttttgttctattttaaaagggcaggaccagtttcgtgagtaggccaaaacaagaggaccaaaagtgtaattaagcc 19359136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 8461106 - 8460927
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  8461106 agcatagggggtaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaatgacc 8461007  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||||||||||  |||||||||||    
T  8461006 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgatgaccaaaagtggaattaagcctat 8460927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 24362205 - 24362383
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  24362205 agcataggggataagtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggacc 24362304  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  24362305 gttttattctgttttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagccta 24362383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 15709146 - 15708969
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||    
T  15709146 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggg-taggacgaaatatgcaacaaaaatgataattgaaggacc 15709048  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| |||  |||||||||||||||| |||||||||| |||||||||||||| ||||||||||    
T  15709047 gttttgttctgttttaaaagggcataaccagtttcgtgagtaggccaaaacactaggaccaaaagtgtaattaagccta 15708969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 29455111 - 29455288
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||| | |||| ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  29455111 agcatatgaggtatgtctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 29455210  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
     ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||| |||| |||||||||    
T  29455211 attttgttctgttttaaaagggcaggaccagtttcgtgagtagaccaaaacacgaggaccaaaggtgtaattaagcct 29455288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 20 - 194
Target Start/End: Original strand, 14215616 - 14215790
Alignment:
Q  20 tagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttt 119  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| || ||| ||||||||||||||||||||| ||||| ||||||||    
T  14215616 tagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatgggggttaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttt 14215715  T
Q  120 tgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||| ||| ||||||||||    
T  14215716 tgttctgttttaaaagggcaggatcagtttcgtgagtaggtcaaaacacgaggaccaaaattgtaattaagccta 14215790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 15372242 - 15372420
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||| | |||||||||||||||||||||| ||||||||||| || |||||||||||  |||| || ||||||||||||||||||||| ||||| ||||    
T  15372242 agcataagaggtaggtctaaaactgtcatttctctgcgtttttggaaaataaaatgggatgtagaacaaaaaatgcaacaaaaatgatacttgaaggacc 15372341  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  15372342 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 15372420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 164560 - 164738
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  164560 agcatagggggtaggtctaaaactgtcatttctctacatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 164659  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| ||| ||||||||| ||||||  ||||||||| ||||| ||||| | | ||||||||||    
T  164660 gttttgttctgttttaaaagggcaagaccagtttagtgagttggccaaaacatgaggatcaaaattataattaagccta 164738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 5819090 - 5818925
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  5819090 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtttt 5818991  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  5818990 aaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctatt 5818925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 195
Target Start/End: Original strand, 24331929 - 24332112
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggac-caaaaatgcaac-aaaaatgataattgaatga 113  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||  ||||||||||| |||||||||||||| | ||    
T  24331929 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaatagaatggggggtaggacgaaaaaatgcaacaaaaaatgataattgcagga 24332028  T
Q  114 ccgttttgttctgttttaaaaga-gcaggaccagtttcgtgagtatgccaaaacacgaggacc-aaaagtgttattaagcctat 195  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||||||||||| || |||| |||||||| |||||| ||||    
T  24332029 ccgttttgttctgttttaaaaaaggcaggatcagtttcgtgagtatgccaaaacatgatgaccaaaaagtgtaattaagtctat 24332112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 18183131 - 18182966
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaataaaa-tggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | | | |||||| | || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  18183131 ctaaaactgtcatttctctgcgtttctggggtataaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 18183032  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    ||||| ||| ||||||||||||||||| |||||||||||| |||||||||||| ||||| ||||||    
T  18183031 aaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaaacctatt 18182966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 19359555 - 19359684
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  19359555 aaaataggaggtaggacgaaaaatccaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaa 19359654  T
Q  166 cacgaggaccaaaagtgttattaagcctat 195  Q
    |||||||||||||||||| |||||||||||    
T  19359655 cacgaggaccaaaagtgtaattaagcctat 19359684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 8647822 - 8647985
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| |  |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  8647822 ctaaaactgtcatttctctgcgtttatggagtttgaaaatagaaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 8647921  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| |||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  8647922 aaaagggcaggatcagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 8647985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 8461315 - 8461477
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||| |||||||| ||||||||| | |||  | ||||| || |||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  8461315 ctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcagcaaaaatgataattgaaggaccgttttgttctgtttt 8461414  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  8461415 aaaagagcaggaacagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 8461477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 14463901 - 14464072
Alignment:
Q  27 taggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctg 126  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| |||| |||||| |||||||||| |||||||||||||||| || |||||||||||     
T  14463901 taggtctaaaactgtcatttctctgcgtttttggagaataaaattgggg-taggacgaaaaatgcaataaaaatgataattgaaggatcgttttgttcta 14463999  T
Q  127 ttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctattctt 199  Q
    |||||||||  ||  |  ||||||||||||| |||||||||||||||| |||||||| |||||||||| ||||    
T  14464000 ttttaaaaggacaaaattagtttcgtgagtaggccaaaacacgaggactaaaagtgtaattaagcctagtctt 14464072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 30 - 193
Target Start/End: Original strand, 25000471 - 25000635
Alignment:
Q  30 gtctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 128  Q
    ||||||||||||||||| ||||||||||| |||  | ||||| || ||| |||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  25000471 gtctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaatgaccattttgttctgtt 25000570  T
Q  129 ttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||| || ||||| ||||||||||| ||||||||| || |||||||||||| |||||||||    
T  25000571 ttaaaagaacatgaccaatttcgtgagtaggccaaaacatgaagaccaaaagtgtaattaagcct 25000635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 16018763 - 16018588
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| |||   ||||| |||||||||||||||| ||||||  ||||||||| |||||| ||||||||| ||||    
T  16018763 agcatagggggtaggtctaaaactgtcatttttctatatttttggagaataaaatggggg-taggacggaaaatgcaataaaaat-ataattgaaggacc 16018666  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||| ||||||||| ||| || || |||||||| || |||||||||||| |||||||||||| |||||||||    
T  16018665 gttttgttctattttaaaagggcatgatcaatttcgtgaataggccaaaacacgaagaccaaaagtgtaattaagcct 16018588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 30 - 196
Target Start/End: Original strand, 16018969 - 16019136
Alignment:
Q  30 gtctaaaactgtcatttatctgcgttttttgagaataaaa-tggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 128  Q
    ||||||||||||||||| ||||||||| | |||  ||||| | || |||||||| |||||| ||||||||||||||||||||  ||| |||| |||| ||    
T  16018969 gtctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatacaacaaaaatgataattgaagaaccattttattctatt 16019068  T
Q  129 ttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  16019069 ttaaaagagcaggaccaatttcgtgagtatgccaaaacatgaggaccaaaagtgtaattaaacctatt 16019136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 24361997 - 24361846
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 131  Q
    |||||||| |||||| ||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||| |||||||||||||||    
T  24361997 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatacttgaaggaccattttgttctgtttta 24361898  T
Q  132 aaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgt 183  Q
     ||| ||| || |||||||||| ||| ||||||||| | |||||||||||||    
T  24361897 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgt 24361846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 164350 - 164191
Alignment:
Q  33 taaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 131  Q
    ||||| |||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||| |||||||||||||||||||||||| |||| ||    
T  164350 taaaattgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaatgaccgttttgttttgttata 164252  T
Q  132 aaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||    
T  164251 aaagggcaggaccagtttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcc 164191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 32 - 190
Target Start/End: Complemental strand, 2864915 - 2864756
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||    
T  2864915 ctaaaactgtcatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgtttt 2864816  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    ||||| ||| || || ||||||||||| |||||||||| |||||||||||||| ||||||    
T  2864815 aaaagggcatgatcaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaag 2864756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 32 - 190
Target Start/End: Complemental strand, 14215402 - 14215243
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||| |||||||||||||||||||||| |||| |||| ||||||||||||||    
T  14215402 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataactgaaggacctttttgttctgtttt 14215303  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    ||||| | |  |||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  14215302 aaaagggtataaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaag 14215243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 32 - 183
Target Start/End: Complemental strand, 24325372 - 24325221
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 131  Q
    |||||||| |||||| ||||||||| | ||||||||||||||||||||||| |||||||| |||||||||||| ||||| |||| |||||||||||||||    
T  24325372 ctaaaactatcatttctctgcgtttgtggagaataaaatggggggtaggacgaaaaatgcgacaaaaatgatacttgaaggaccattttgttctgtttta 24325273  T
Q  132 aaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgt 183  Q
     ||| ||| || |||||||||| ||| ||||||||| | |||||||||||||    
T  24325272 caagggcatgatcagtttcgtgggtaggccaaaacatggggaccaaaagtgt 24325221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 7349420 - 7349562
Alignment:
Q  50 tgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagttt 149  Q
    ||||||||| ||| | ||||||||||||||||  |||| ||||||||||||||||| |||| ||  |||||||| ||||||||||||||||||||| |||    
T  7349420 tgcgtttttggaggaaaaaatggggggtaggatgaaaagtgcaacaaaaatgataactgaaggatagttttgttttgttttaaaagagcaggaccaattt 7349519  T
Q  150 cgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||||||  |||||||||||||||||||||||| ||||||||    
T  7349520 cgtgagtagaccaaaacacgaggaccaaaagtgtaattaagcc 7349562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 25000266 - 25000112
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||| | ||||| |||||||||||||||| ||| ||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| || ||||    
T  25000266 agcatatgaggtagatctaaaactgtcatttctctacgtttttggagaataaaatggggggtaggacaaaaaatgcaataaaaatgataattaaaggacc 25000167  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacga 170  Q
     |||| ||||||||||| || ||| |||||  |||||||||| ||||||||||||    
T  25000166 attttattctgttttaacagggcatgaccaaattcgtgagtaggccaaaacacga 25000112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 24331722 - 24331557
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaat--gataattgaatgaccgttttgttctgtt 128  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || | |||||  ||||||||||||||||   |||||||||| |||||||||||||||||    
T  24331722 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagctaggatgaaaaatgcaacaaaaaatagataattgaaggaccgttttgttctgtt 24331623  T
Q  129 ttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||||| |||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||    
T  24331622 ttaaaagggcaggaccagtttcgtgagtagatcaaaacacgaggaccaaaagtgtaattaagccta 24331557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 29454901 - 29454739
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||||| |||||| ||||||||| | |||  | ||||| || |||||||| ||||||||| |||||||||||||| || |||||||||||||||||||    
T  29454901 ctaaaactatcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcagcaaaaatgataattcaaggaccgttttgttctgtttt 29454802  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||| ||| ||||| ||||||||||| |||||||||| | |||||||||||  |||||||||    
T  29454801 aaaagggcatgaccaatttcgtgagtaggccaaaacacaatgaccaaaagtgaaattaagcct 29454739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 4222147 - 4222266
Alignment:
Q  72 gggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgag 171  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||  ||||||||||||||||||| ||| ||||| ||||||||| |  ||||||||||||    
T  4222147 gggggtaggacgaaaaatgcaataaaaatgataactgaatgacaattttgttctgttttaaaagggcatgaccattttcgtgagaagcccaaaacacgag 4222246  T
Q  172 gaccaaaagtgttattaagc 191  Q
    |||||||||||| |||||||    
T  4222247 gaccaaaagtgtaattaagc 4222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 54 - 179
Target Start/End: Original strand, 6019177 - 6019302
Alignment:
Q  54 ttttttgagaataaaatggggggtaggaccaaaa-atgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgt 152  Q
    ||||| ||| |||||||||| |||||||| |||| |||||||||||||||||||| || ||| |||||||||||||||||||||||| || |||||||||    
T  6019177 tttttggaggataaaatgggaggtaggacgaaaaaatgcaacaaaaatgataattaaaagacagttttgttctgttttaaaagagcaagatcagtttcgt 6019276  T
Q  153 gagtatgccaaaacacgaggaccaaaa 179  Q
    ||||| ||||||||| || ||||||||    
T  6019277 gagta-gccaaaacatgatgaccaaaa 6019302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 79 - 190
Target Start/End: Complemental strand, 15371983 - 15371873
Alignment:
Q  79 ggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaa 178  Q
    |||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||  ||||||||||  |||||| ||||||| ||||    
T  15371983 ggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaggacca-attcgtgagtagaccaaaatacgaggatcaaa 15371885  T
Q  179 agtgttattaag 190  Q
    ||||| ||||||    
T  15371884 agtgtaattaag 15371873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 7348685 - 7348559
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||||||||||||||| |||| |||||||||||||||||  ||| ||  |||||||||||||||||||| ||| ||||| |||||||||||  | ||||    
T  7348685 aaaatggggggtaggacgaaaagtgcaacaaaaatgataaccgaaggaaagttttgttctgttttaaaagggcacgaccaatttcgtgagtagactaaaa 7348586  T
Q  166 cacgaggaccaaaagtgttattaagcc 192  Q
    || ||||||||||| ||| ||||||||    
T  7348585 catgaggaccaaaaatgtaattaagcc 7348559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 52 - 192
Target Start/End: Complemental strand, 4623286 - 4623148
Alignment:
Q  52 cgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcg 151  Q
    ||||||| ||| |||||||||||  ||||||  ||||||| | |||||||||||||||| |||  |||||||||||||||||   ||||||||| |||||    
T  4623286 cgtttttggaggataaaatgggg--taggacggaaaatgccataaaaatgataattgaaggacaattttgttctgttttaaagaggcaggaccaatttcg 4623189  T
Q  152 tgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||| | |||||||||| |||||||||||| ||||||||    
T  4623188 tgagtaagtcaaaacacgatgaccaaaagtgtaattaagcc 4623148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 15709353 - 15709513
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| |||||| || | |||  | ||||| || |||||||| |||||||||||| ||||||||| | || |||||||||||||||||||    
T  15709353 ctaaaactgtcatttctctgcgcttatggagtttgaaaataggaggtaggacgaaaaatgcaacagaaatgataactaaaggaccgttttgttctgtttt 15709452  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
     |||| ||| ||| |||||| |||||| |||||||||| | |||||||||||| ||||||||    
T  15709453 -aaagggcatgactagtttcatgagtaggccaaaacacaatgaccaaaagtgtaattaagcc 15709513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 64 - 179
Target Start/End: Original strand, 4624642 - 4624757
Alignment:
Q  64 ataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaa-agagcaggaccagtttcgtgagtatgcca 162  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||||| ||||||||| ||| || ||||| ||||||||||| |  |    
T  4624642 ataaaatggggggtaggacgaaaaatgcaacataaatgataattgaatgatagttttgttatgttttaaagaga-catgaccaatttcgtgagtaggtta 4624740  T
Q  163 aaacacgaggaccaaaa 179  Q
    |||||||||||| ||||    
T  4624741 aaacacgaggacgaaaa 4624757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 6018431 - 6018315
Alignment:
Q  74 gggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgagga 173  Q
    ||||||||| |||| |||||||||||||||||||||| ||   |||||||||||||||||||  || |||||||||||||||||   ||||||||||| |    
T  6018431 gggtaggactaaaactgcaacaaaaatgataattgaa-gataattttgttctgttttaaaaggacatgaccagtttcgtgagtagaacaaaacacgagaa 6018333  T
Q  174 ccaaaagtgttattaagc 191  Q
    |||||| ||| |||||||    
T  6018332 ccaaaaatgtaattaagc 6018315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 192
Target Start/End: Complemental strand, 4219800 - 4219663
Alignment:
Q  54 ttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtg 153  Q
    ||||| ||| |||||||||||| |||||| |||||||||||||||||||||| | || |||   |||||||||||||||||  ||| ||||| ||| ||     
T  4219800 tttttggaggataaaatggggg-taggacgaaaaatgcaacaaaaatgataactaaaggacaactttgttctgttttaaaaaggcatgaccatttttgta 4219702  T
Q  154 agtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    | ||  |||||||||||||| ||||||||| ||||||||    
T  4219701 aatagcccaaaacacgaggatcaaaagtgtaattaagcc 4219663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 13814131 - 13814226
Alignment:
Q  50 tgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattga-----atgaccgttttgttctgttttaaaagagcagg 141  Q
    ||||||||| ||| ||||||||||| ||||||| |||| |||||||||||||||||||||     ||||| ||||||||||| |||||||| |||||    
T  13814131 tgcgtttttggaggataaaatgggg-gtaggacgaaaagtgcaacaaaaatgataattgaaagacatgacagttttgttctgatttaaaagggcagg 13814226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 14462730 - 14462683
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatga 113  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||    
T  14462730 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatga 14462683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 16752757 - 16752717
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttt 56  Q
    |||||||||||||||||||||||| |||||| | |||||||    
T  16752757 agcatagggggtaggtctaaaactatcatttctttgcgttt 16752717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 143; Significance: 4e-75; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 4969 - 4791
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  4969 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 4870  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  4869 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 4791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 78 - 190
Target Start/End: Original strand, 5222 - 5334
Alignment:
Q  78 aggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaa 177  Q
    ||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||  || |||||||||||||| || |||||||||||||||||||    
T  5222 aggacgaaaaatgcaacaaaaatgataattgaattaccgttttattctgttttaaaaggacaagaccagtttcgtgactaggccaaaacacgaggaccaa 5321  T
Q  178 aagtgttattaag 190  Q
    |||||| ||||||    
T  5322 aagtgtaattaag 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 143; Significance: 4e-75; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 4576 - 4754
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||| || ||||    
T  4576 agcatagggggtaggtctaaaactgtcatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaggacc 4675  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  4676 gttttgttctgttttaaaagggcaggaccagtttcgtgagtatgccaaaacacgaagaccaaaagtgtaattaagccta 4754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 153
Target Start/End: Complemental strand, 4364 - 4242
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||| ||||| |||  | ||||| || ||||| || ||||||||||||||||||||||||||| |||||||||||| ||||||    
T  4364 ctaaaactgtcatttctctgcatttttagagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgtttt 4265  T
Q  131 aaaagagcaggaccagtttcgtg 153  Q
    ||||| |||||||||||||||||    
T  4264 aaaagggcaggaccagtttcgtg 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 4e-75; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 11090695 - 11090517
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgt 117  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  11090695 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 11090596  T
Q  118 tttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  11090595 tttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaacctatt 11090517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 239528 - 239351
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  239528 agcataggggataggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 239429  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  239428 gttttgttctgttttaaaag-gcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagccta 239351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 40027316 - 40027139
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  40027316 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggagggtaggacaaaaaatgcaacaaaaatgataattgaaggacc 40027217  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| |||||||||||| |||||||||    
T  40027216 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaattaagcct 40027139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 22374496 - 22374316
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||| || ||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  22374496 agcatagaggttaggtctaaaactatcatttctttgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 22374397  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  22374396 gttttgttctgttttaaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctatt 22374316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 3025641 - 3025479
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||| ||||    
T  3025641 agcatagggggtaggtctaaaactgtcatttctttgcgttttttgagaataaaatggggg-taggacgaaaaatgcaacaaaaatgatacttgaaggacc 3025543  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaa 179  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3025542 gttttgttctgttttaaaagagcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaa 3025479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 1978284 - 1978106
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||    
T  1978284 agcatatggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggggacaggacaaaaaatgcaacaaaaatgataattgaaggacc 1978185  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||| ||| ||||||||||    
T  1978184 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacaaggaccaaaaatgtaattaagccta 1978106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 18451200 - 18451378
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| ||||| |||     
T  18451200 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaagaaaaatgcaacaaaaatgatatttgaaggact 18451299  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
     ||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  18451300 attttgttctgttttaaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 18451378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 40815714 - 40815892
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||    
T  40815714 agcatagagggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagggcc 40815813  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| |||  |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  40815814 gttttgttctgttttaaaagggcattaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaaaccta 40815892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 14432315 - 14432145
Alignment:
Q  19 atagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgtt 118  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  14432315 atagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggaccaaaaatgcaacaaaaatgatagttgaaggaccgtt 14432216  T
Q  119 ttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    ||||| | ||||||||| ||| |||||||||| |||||| ||||||||||||||||||||||||| |||||    
T  14432215 ttgttatattttaaaagggcaagaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaa 14432145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 26538273 - 26538096
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||| || ||||||||||||||| |||| |||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  26538273 agcatagaggataggtctaaaactgttatttctctgtgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 26538174  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    | |||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  26538173 gctttgttctgttttaaaagggcagaaccagtttcgtgagtaagccaaaacacgaggaccaaaagtgtaattaagcct 26538096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 192
Target Start/End: Complemental strand, 43058509 - 43058333
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  43058509 agcatagggggtaggtctaaaactgtcatttctctacgtttttggagaataaaatggggggtagaacgaaaaatgcaacaaaaatgataattgaaggacc 43058410  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||||||||  ||||||||||||| ||||||  ||||||||||||||| ||||||||| ||||||||    
T  43058409 gttttgttctgttttaaaaaggcaggaccagtttagtgagttggccaaaacacgaggatcaaaagtgtaattaagcc 43058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 28616788 - 28616613
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttg-agaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccg 116  Q
    |||||||||||||||||||||||  |||| ||||||||||||| | |||||||||||||||||||| |||| |||||||||||||||||||||| |||||    
T  28616788 catagggggtaggtctaaaactgctatttctctgcgttttttggataataaaatggggggtaggacgaaaattgcaacaaaaatgataattgaaggaccg 28616689  T
Q  117 ttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  28616688 ttttgttctgttttaaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 28616613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 26538454 - 26538626
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttg 121  Q
    |||||||||||||||||||||||| ||||||||| | | |  | ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  26538454 ggggtaggtctaaaactgtcatttctctgcgtttctggggtttgaaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttg 26538553  T
Q  122 ttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  26538554 ttctgttttaagagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 26538626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 189
Target Start/End: Original strand, 8425736 - 8425902
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgt 122  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| ||| ||||||||||||||||||||||||||| ||| |||||||    
T  8425736 ggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaattgggggtaagacgaaaaatgcaacaaaaatgataattgaaggacagttttgt 8425835  T
Q  123 tctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    ||| ||||||||| ||||||||| |||||||||||  ||||||||| || ||||||||||| |||||    
T  8425836 tctattttaaaagggcaggaccaatttcgtgagtagaccaaaacacaagaaccaaaagtgtaattaa 8425902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 193
Target Start/End: Complemental strand, 7446519 - 7446341
Alignment:
Q  18 catagggggtaggtctaaaa----ctgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatga 113  Q
    ||||||||||| ||||||||    ||||||||| ||||||||||| |||||||||||||||| || ||| |||||||||| |||||||||||||||||||    
T  7446519 catagggggtatgtctaaaattaactgtcatttctctgcgtttttggagaataaaatggggg-tatgacgaaaaatgcaataaaaatgataattgaatga 7446421  T
Q  114 ccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||||||||||| ||||||||| |||| ||||||  |||||||||||||| ||||||||| |||||||||    
T  7446420 ccgttttgttctgttttaaaagggcaggaccaatttcatgagtagaccaaaacacgaggatcaaaagtgtaattaagcct 7446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 20444890 - 20444748
Alignment:
Q  51 gcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttc 150  Q
    |||||||| ||| ||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  20444890 gcgtttttggaggataaaatggggggtaggacgaaaactgcaacaaaaatgataactgaaggaccgttttgttctgttttaaaagggcaggaccagtttc 20444791  T
Q  151 gtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||||  ||||||||||||||||||||||||| |||||||||    
T  20444790 gtgagttggccaaaacacgaggaccaaaagtgtaattaagcct 20444748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 7446730 - 7446893
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||||| |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  7446730 ctaaaactgtcatttctctgcgtttttggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 7446829  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| ||||||||||||||||||||| | ||||||||||||| ||||| ||| ||||||||||    
T  7446830 aaaagggcaggaccagtttcgtgagtaaggcaaaacacgaggatcaaaaatgtaattaagccta 7446893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 18450991 - 18450829
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||    
T  18450991 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggactaaaaatgcaaaaaaaatgataattgaaggaccgttttgttctgtttt 18450892  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  18450891 aaaagggctggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 18450829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 46 - 192
Target Start/End: Complemental strand, 35779854 - 35779708
Alignment:
Q  46 tatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggacca 145  Q
    |||| |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||||  |||||||||    
T  35779854 tatcagcgtttttggaggataaaatggggggtaggacaaaaaatgcaacaaaaatgataattgaaggacaattttgttctgttttaaaatggcaggacca 35779755  T
Q  146 gtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
     ||||||||||||| ||||||||||||||||||||||| ||||||||    
T  35779754 ttttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcc 35779708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 20440431 - 20440578
Alignment:
Q  46 tatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggacca 145  Q
    |||| |||||||| ||| ||||| |||||| |||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  20440431 tatcagcgtttttggaggataaa-tgggggataggacgaaaactgcaacaaaaatgataactgaatgaccgttttgttctgttttaaaagggcaggacca 20440529  T
Q  146 gtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  20440530 gtttcgtgagttggccaaaacacgaggaccaaaagtgtaattaagccta 20440578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 22374709 - 22374872
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||| ||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22374709 ctaaaactgtcatttctctgcatttctagagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22374808  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  22374809 aaaagggcaagaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 22374872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 32 - 196
Target Start/End: Original strand, 11090904 - 11091069
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||| |||||||||||||||||| | |||  | ||||| || | |||||| |||||| |||||| ||||||||||||| |||||||||||||||||||    
T  11090904 ctaaaattgtcatttatctgcgtttctggagtttgaaaataggagataggacgaaaaatacaacaataatgataattgaaggaccgttttgttctgtttt 11091003  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  11091004 aaaagggcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctatt 11091069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 75 - 195
Target Start/End: Original strand, 28847123 - 28847243
Alignment:
Q  75 ggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggac 174  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  28847123 ggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttttgttttaaaagagcaggaccagtttcgtgagtagaccaaaacacgaggac 28847222  T
Q  175 caaaagtgttattaagcctat 195  Q
    ||||| ||| |||||||||||    
T  28847223 caaaaatgtaattaagcctat 28847243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 40027559 - 40027682
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  40027559 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 40027658  T
Q  166 cacgaggaccaaaagtgttattaa 189  Q
    |||||||||||||||||| |||||    
T  40027659 cacgaggaccaaaagtgtaattaa 40027682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 190
Target Start/End: Complemental strand, 40815506 - 40815347
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaataaaa-tggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  ||||| | || |||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||    
T  40815506 ctaaaactgtcatttctctgcgtttctggagtttaaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagaaccgttttgttatgtttt 40815407  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    ||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  40815406 aaaagggcaagaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaag 40815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 43058717 - 43058879
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||| ||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  43058717 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaa-tgataattgaaggaccattttgttctgtttt 43058815  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  43058816 aaaagagcaggaccagtttcgtgagtaggccaaaacacgaggatcaaaagtgtaattaagccta 43058879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 1978528 - 1978657
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||| |||||||    
T  1978528 aaaataggaggtaggacaaaaaatgcaacaaaaatgataattgaaggactgttttgttctgttttaaaagggcaggaccaatttcgtgagtaggccaaaa 1978627  T
Q  166 cacgaggaccaaaagtgttattaagcctat 195  Q
    ||| |||||||||||||| |||||||||||    
T  1978628 cacaaggaccaaaagtgtaattaagcctat 1978657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 46 - 190
Target Start/End: Complemental strand, 8972383 - 8972239
Alignment:
Q  46 tatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggacca 145  Q
    |||| |||||||| ||| ||||||| |||||||| || |||||||||||||||||||||||||||||||  |||||||||||||| |||| ||| |||||    
T  8972383 tatcagcgtttttggaggataaaatagggggtagaacgaaaaatgcaacaaaaatgataattgaatgacaattttgttctgttttgaaagggcatgacca 8972284  T
Q  146 gtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
     ||||||||| ||||||||||||||||||||||||||| ||||||    
T  8972283 ttttcgtgagcatgccaaaacacgaggaccaaaagtgtaattaag 8972239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 35781067 - 35781207
Alignment:
Q  51 gcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttc 150  Q
    |||||||| ||| |||||||||||| |||||| ||||||||||||||||||||||||||| ||  |||||||||||||||||||| ||| ||||| ||||    
T  35781067 gcgtttttggaggataaaatgggggttaggacgaaaaatgcaacaaaaatgataattgaaggatagttttgttctgttttaaaagggcatgaccattttc 35781166  T
Q  151 gtgagtatgccaaaacacgaggaccaaaagtgttattaagc 191  Q
    ||||||| ||||||||||||||| ||||||||| |||||||    
T  35781167 gtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 35781207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 28617033 - 28617160
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||| ||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||  ||| |||||||||||||||| |||||||    
T  28617033 aaaataggaggtaagacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaaggacagaaccagtttcgtgagtaggccaaaa 28617132  T
Q  166 cacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||||||| |||||||||    
T  28617133 cacgaggaccaaaagtgtaattaagcct 28617160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 32 - 183
Target Start/End: Original strand, 239736 - 239888
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||| ||||| ||||||||| | |||  | ||||| || |||| ||| ||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  239736 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtatgacgaaaaacgcaacaaaaatgataattgaaggaccattttgttctgtttt 239835  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgt 183  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  239836 aaaagggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgt 239888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 192
Target Start/End: Original strand, 3025848 - 3026006
Alignment:
Q  33 taaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 131  Q
    |||||||||||||| ||||| ||| | |||  | ||||| || |||||||| ||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  3025848 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaataataattgaaggaccgttttgtt-tgtttta 3025946  T
Q  132 aaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||| |||| |||| ||||||||||| ||||||||||||||||||||| ||| ||||||||    
T  3025947 aaagggcagaaccaatttcgtgagtaagccaaaacacgaggaccaaaa-tgtaattaagcc 3026006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 15551641 - 15551501
Alignment:
Q  50 tgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagttt 149  Q
    ||||||||| ||| ||||||||| |||| |||| |||||||||||||||||||||| |||| |||  ||||||| ||||||||||  ||| ||||| |||    
T  15551641 tgcgtttttggaggataaaatggagggttggacgaaaaatgcaacaaaaatgataactgaaggacatttttgttttgttttaaaaaggcatgaccatttt 15551542  T
Q  150 cgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    ||||||||  |||||||||||||||||||||||| ||||||    
T  15551541 cgtgagtaaaccaaaacacgaggaccaaaagtgtaattaag 15551501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 189
Target Start/End: Complemental strand, 8425514 - 8425358
Alignment:
Q  33 taaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttta 131  Q
    |||||||||||||| ||||| ||| | |||  | ||||| || |||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||    
T  8425514 taaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacacaaatgataattgaa-gaccgttttgttctgtttta 8425416  T
Q  132 aaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||  | | ||||| ||||||||||| |||||||||| |||||||||||||| |||||    
T  8425415 aaaaggtaagaccaatttcgtgagtaggccaaaacacaaggaccaaaagtgtaattaa 8425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 190
Target Start/End: Original strand, 14432525 - 14432684
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||  ||||||||||||||||| |||||||||  ||| |||| |||||||||    
T  14432525 ctaaaactgtcatttctctgcgtttctagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaataataattgaagaaccattttattctgtttt 14432624  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    ||||  ||| |||||||||| |||||| ||||||||||||||||||||| ||| ||||||    
T  14432625 aaaatggcatgaccagtttcatgagtaggccaaaacacgaggaccaaaaatgtaattaag 14432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 15552473 - 15552596
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||  ||||||||||||||||||| || ||| || ||||||||||| |||||||    
T  15552473 aaaatggagggtaggacgaaaaatacaacaaaaatgataattgaatgacaattttgttctgttttaaaagggc-ggatcattttcgtgagtaggccaaaa 15552571  T
Q  166 cacgaggaccaaaagtgttattaag 190  Q
    ||  | |||||||||||| ||||||    
T  15552572 cattatgaccaaaagtgtaattaag 15552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 28143400 - 28143577
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||| | |||   ||||| ||  ||||||| |||| ||||| ||| |||||| || |  |||     
T  28143400 agcatagggggtaggtctaaaactgtcatttctctgcgtttctggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 28143498  T
Q  116 gttttgttctgttttaaaaga-gcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
     |||||||| | ||| ||||| ||||||||| |||||||||   | |||||  |||||||||||||||  ||||||||||    
T  28143499 attttgttc-gatttgaaagaggcaggaccattttcgtgagctggtcaaaatgcgaggaccaaaagtgaaattaagccta 28143577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 6e-74; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 31779021 - 31779201
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||    
T  31779021 agcatagggggtacgtctaaaactgacatttctctgcgtttttggagaataaaatggggggtgggacgaaaaatgcaacaaaaatgataattgaaggacc 31779120  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  31779121 gttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctatt 31779201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 39555946 - 39556122
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  39555946 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacgaaaatgataattgaaggacc 39556045  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
     ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  39556046 attttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 39556122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 5137156 - 5136976
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  5137156 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 5137057  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    |||||||||||||||||||| ||| ||||| ||||||||||  ||||||||||||||||||||||||| ||||| ||||||    
T  5137056 gttttgttctgttttaaaagggcatgaccaatttcgtgagttggccaaaacacgaggaccaaaagtgtaattaaacctatt 5136976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 41046876 - 41046703
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  41046876 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 41046777  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||||||||||||||||||| ||| |||||||||||| | || ||||||||||||||||||||||||| |||||    
T  41046776 gttttgttctgttttaaaagggcatgaccagtttcgtaattaggccaaaacacgaggaccaaaagtgtaattaa 41046703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 20840734 - 20840558
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgt 117  Q
    ||||||||||||||||||||||||||||| |||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  20840734 catagggggtaggtctaaaactgtcatttctctgcgtttaaggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgt 20840635  T
Q  118 tttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||| ||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  20840634 tttgttctattttaaaaaggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 20840558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 24300925 - 24301103
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| | ||| ||||    
T  24300925 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgatactcgaaggacc 24301024  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||| ||||||||||  ||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  24301025 gttttgttttgttttaaaatggcaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 24301103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 37727105 - 37726928
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  37727105 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 37727006  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||| ||||||||||| |||| ||||||||||| || |  |||||||||||||||||||||||| |||||||||    
T  37727005 gttttgttatgttttaaaagggcagaaccagtttcgtaagcagaccaaaacacgaggaccaaaagtgtaattaagcct 37726928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 23644638 - 23644461
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||     
T  23644638 agcatagggggtaggtctaaaactattatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggact 23644539  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||||||||  ||||||||| ||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  23644538 gttttgttctgttttaaaatggcaggaccaatttcgtgagtaggccaaaatacgaggaccaaaagtgtaattaagcct 23644461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 26837725 - 26837902
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  26837725 agcatagggggtaagtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaatgcaacaaaaatgatacttgaatgacc 26837824  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||| |||| |||| |||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  26837825 gttttgttctatttt-aaagggcagaaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 26837902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 23 - 192
Target Start/End: Complemental strand, 43973610 - 43973441
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgt 122  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  43973610 ggggtaggtctaaaactgttatttatctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgt 43973511  T
Q  123 tctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||||||||||| |||  | || ||||||||||| | ||||||||||||||||||||||| ||||||||    
T  43973510 tctgttttaaaagggcataatcattttcgtgagtaggacaaaacacgaggaccaaaagtgtaattaagcc 43973441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 16 - 194
Target Start/End: Complemental strand, 30104657 - 30104480
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  30104657 agcatagggggtaggtctaaaactgtcatttctctgcgtttttagataataaaatggggg-taggacgaaaaatgcaacaaaaatgataattgaaggacc 30104559  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||| | || ||||||||||| ||||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  30104558 gttctattttgttttaaaagggcaggaccaatttcgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagccta 30104480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 37 - 194
Target Start/End: Complemental strand, 48453144 - 48452987
Alignment:
Q  37 actgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaaga 136  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||      
T  48453144 actgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaatg 48453045  T
Q  137 gcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||| || |||||||    
T  48453044 gcaggaccagtttcgtgagtaggccaaaacacgatgaccaaaagtgtaatcaagccta 48452987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 25853596 - 25853776
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  25853596 agcatagggggtaggtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggacc 25853695  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
     ||||||||||||||||||   || |||||||||||||||||   ||||||||||||| ||||||||| |||||| |||||    
T  25853696 attttgttctgttttaaaatgacaagaccagtttcgtgagtagagcaaaacacgaggatcaaaagtgtaattaagtctatt 25853776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 18 - 192
Target Start/End: Original strand, 32535330 - 32535508
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaat-----gataattgaatg 112  Q
    |||||||| ||||||||||||| |||||| ||||||||||| |||||||||||||||| |||||| |||||||||||||||||     |||||||||| |    
T  32535330 cataggggttaggtctaaaactatcatttctctgcgtttttggagaataaaatggggg-taggacgaaaaatgcaacaaaaatttaatgataattgaagg 32535428  T
Q  113 accgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  32535429 accgttttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 32535508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 27393946 - 27394123
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||| ||||||||||||||||||| |||| ||||||||||| ||||||||||| ||||||||||   |||||||||||||||||||||||||| || |    
T  27393946 agcatatggggtaggtctaaaactgttatttctctgcgtttttggagaataaaattgggggtaggatggaaaatgcaacaaaaatgataattgaaggatc 27394045  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||||||||  ||||||||  ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  27394046 gttttgttctgttttaaaaaggcaggacctatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 27394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 22425182 - 22425354
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||| ||||||| | | |||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  22425182 agcatagggggtagatctaaaaatctaatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaagtacc 22425281  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttatta 188  Q
    |||||||||||||||| ||| ||| |||||| |||||||||| ||| ||||||||||||||||||||| ||||    
T  22425282 gttttgttctgttttacaagggcatgaccagattcgtgagtaggccgaaacacgaggaccaaaagtgtaatta 22425354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 43973824 - 43973987
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | | | || ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43973824 ctaaaactgtcatttctctgcgtttctggggtatgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 43973923  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  43973924 aaaagggcagaaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 43973987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 17464860 - 17465038
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaa-atgcaacaaaaatgataattgaatgac 114  Q
    |||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||    
T  17464860 agcataggggttaggtctaaaactgtcatttctctgcatttttggagaataaaatggggggtaggacaaaaaaatgcaacaaaaatgataattgaaggac 17464959  T
Q  115 cgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||||||||| ||||||||| |   |||||||||| || ||| ||||||||||||||||||||| ||| |||||||||    
T  17464960 cgttttgttctattttaaaagggtcagaccagtttcatgcgtaggccaaaacacgaggaccaaaaatgtaattaagcct 17465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 37727314 - 37727475
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  37727314 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 37727413  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  37727414 aaaagagcaggaccagtttcgtgagtaggccaaaacatgaggaccaaaagtgtaattaagcc 37727475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 26274936 - 26275098
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||  ||||    
T  26274936 agcatagggggtaggtctaaaactgtcatttctctgcggttttggagaataaaatggggggtaggacgaaaaa-gcaacaaaaatgataattgagggacc 26275034  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaa 179  Q
    ||||| |||||||||||||| | ||||||||||||||||||| | |||||||| ||| ||||||    
T  26275035 gttttattctgttttaaaagggtaggaccagtttcgtgagtaggtcaaaacacaagggccaaaa 26275098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 32 - 195
Target Start/End: Original strand, 4275748 - 4275912
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||| ||||| ||||||||| | |||  | ||||| || |||||||| |||||||||||||||||||||||| || |||||||||||||||||||    
T  4275748 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgtttt 4275847  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  4275848 aaaagagcatgaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcctat 4275912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 20840945 - 20841107
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||| ||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  20840945 ctaaaactgccatttctctgcgtttatggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 20841044  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||  ||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  20841045 aaaaaggcaggaccagtttcgtgagtaggccaaaacacgagcaccaaaagtgtaattaagcct 20841107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 27393822 - 27393660
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | | |  | ||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  27393822 ctaaaactgtcatttctctgcgtttctggggtttgaaaatagggggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 27393723  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||  ||||||||||||| ||||||| | ||||||||||||||||||||||| |||||||||    
T  27393722 aaaatggcaggaccagttttgtgagtaggtcaaaacacgaggaccaaaagtgtaattaagcct 27393660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 39555739 - 39555577
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || ||||| || ||||||||||||||||||||||||||| |||| ||||||||||||||    
T  39555739 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgtttt 39555640  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||  ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  39555639 aaaatggcaggaccagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcct 39555577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 30 - 194
Target Start/End: Original strand, 29801798 - 29801963
Alignment:
Q  30 gtctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtt 128  Q
    |||||||| |||||||| ||||||||| | |||  | ||||| || ||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  29801798 gtctaaaattgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaaatgcaacaaaaatgataattgaaagaccgttttgttctgtt 29801897  T
Q  129 ttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||    
T  29801898 ttaaaagggcaggaccagtttcgtgagtaggccaaaatacgaggatcaaaagtgtaattaagccta 29801963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 30098182 - 30098309
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||||||||| |||||    
T  30098182 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccattttgttctgttttaaaagggcaagaccagtttcgtgagtatgtcaaaa 30098281  T
Q  166 cacgaggaccaaaagtgttattaagcct 193  Q
    |||||||||||||||||| |||||||||    
T  30098282 cacgaggaccaaaagtgtaattaagcct 30098309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 66 - 189
Target Start/End: Complemental strand, 32535085 - 32534962
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  32535085 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaaaggcaggaccaatttcgtgagtatgccaaaa 32534986  T
Q  166 cacgaggaccaaaagtgttattaa 189  Q
    |||||||||||||||||| |||||    
T  32534985 cacgaggaccaaaagtgtaattaa 32534962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 51 - 189
Target Start/End: Original strand, 25612381 - 25612519
Alignment:
Q  51 gcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttc 150  Q
    |||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||| || ||| |||||||||| ||||||||| ||||||||| ||||    
T  25612381 gcgtttttggaggataaaatggggggtaggacgaaaaatgcaacaaaaatgataattaaaagacagttttgttctattttaaaagggcaggaccaatttc 25612480  T
Q  151 gtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    ||||||| | ||||||||||||||||||||||| |||||    
T  25612481 gtgagtaggtcaaaacacgaggaccaaaagtgtaattaa 25612519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 32 - 193
Target Start/End: Complemental strand, 31778814 - 31778652
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||  ||| |||||||||||||||||||    
T  31778814 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataaacgaaggaccgttttgttctgtttt 31778715  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||| |||||||||||||| ||||||  |||||||||||||||||||||||| |||||||||    
T  31778714 aaaagggcaggaccagtttcatgagtagaccaaaacacgaggaccaaaagtgtaattaagcct 31778652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 23644849 - 23645010
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||  | |||  | ||||| || |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  23644849 ctaaaactgtcatttctctgcgttactagagtttgaaaataggaggtaggatgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 23644948  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||| | ||||||| ||||||||||| ||||||||||||||||||||||| | ||||||||    
T  23644949 aaaagggtaggaccaatttcgtgagtaggccaaaacacgaggaccaaaagtataattaagcc 23645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 71 - 192
Target Start/End: Complemental strand, 29801477 - 29801356
Alignment:
Q  71 ggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacga 170  Q
    |||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  29801477 ggggggtaagacgaaaaatgcaacaaaaatgatacttgaaggaccgttttgttctgttttaaaagggcaggaccagttttgtgagtatgccaaaacacga 29801378  T
Q  171 ggaccaaaagtgttattaagcc 192  Q
     |||||||||||| ||||||||    
T  29801377 tgaccaaaagtgtaattaagcc 29801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 17464617 - 17464489
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| || || |||||||    
T  17464617 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgttttaaaagggcatgaccagtttcgcgaataggccaaaa 17464518  T
Q  166 cacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||| ||||||||||    
T  17464517 cacgaggaccaaaagtgtaattaagccta 17464489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 5137365 - 5137528
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || | |||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  5137365 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggagataggactaaaaatgcaacaaaaatgataattgaaggaccattttgttctatttt 5137464  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| |||| ||||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  5137465 aaaagggcagaaccagtttcatgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 5137528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 25853395 - 25853234
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||||||| |||| ||||||||| | |||  | ||||| || ||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||    
T  25853395 ctaaaactgttatttctctgcgtttctggagtttgaaaataggaggtagaacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctatttt 25853296  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    ||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  25853295 aaaagggcatgaccaatttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 50116812 - 50116954
Alignment:
Q  50 tgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagttt 149  Q
    ||||||||| ||| | ||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||| ||| ||||| ||| ||||| |||    
T  50116812 tgcgtttttggaggaaaaaatggggggtaggacgaaaattgcaacaaaaatgataactgaatgaccgttttgttctctttcaaaagggcatgaccaattt 50116911  T
Q  150 cgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||| | ||||||||||||| ||||||||| ||||||||    
T  50116912 cgtgagtaagtcaaaacacgaggatcaaaagtgtaattaagcc 50116954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 194
Target Start/End: Complemental strand, 22424975 - 22424812
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||| ||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22424975 ctaaaactgtcatttctctgcatttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 22424876  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||  ||| ||||||||||| |||| ||  ||||||||| ||||||||||| ||||||||||    
T  22424875 aaaaggacagaaccagtttcgtaagtaggcttaaacacgagaaccaaaagtgtaattaagccta 22424812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 32 - 189
Target Start/End: Complemental strand, 26274728 - 26274570
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||||||||||||| |||||||| | |||  | ||||| || |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  26274728 ctaaaactgtcatttaactgcgtttctggagtttgaaaataggaggtatgacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttctgtttt 26274629  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    ||||| |||||||||||||||||||||  |||||| || |||| ||||| ||| |||||    
T  26274628 aaaagggcaggaccagtttcgtgagtagtccaaaatacaaggatcaaaaatgtaattaa 26274570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 196
Target Start/End: Complemental strand, 26837521 - 26837356
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||||||| ||| |||| |    
T  26837521 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgtttcgttatgttat 26837422  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctatt 196  Q
    ||||| ||||||||| ||||||||||| ||||||| || |||||||||| ||| ||||| ||||||    
T  26837421 aaaagggcaggaccaatttcgtgagtaggccaaaatacaaggaccaaaaatgtaattaaacctatt 26837356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 45966064 - 45965935
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    |||||||||| ||| || |||||||||||| |||||||||| ||| |||  ||||||| ||||||||||||||||||  |  ||||||||||||||||||    
T  45966064 aaaatgggggttagaacgaaaaatgcaacacaaatgataatcgaaggacatttttgttatgttttaaaagagcaggattaacttcgtgagtatgccaaaa 45965965  T
Q  166 cacgaggaccaaaagtgttattaagcctat 195  Q
    |||||||||||||||||| |||||||||||    
T  45965964 cacgaggaccaaaagtgtaattaagcctat 45965935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 201
Target Start/End: Original strand, 23228414 - 23228561
Alignment:
Q  53 gttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgt 152  Q
    |||||| ||| |||||||||| |||||||| |||||||||| |||||||||||||||| |||  |||||||| |||||||||| ||| || || ||||||    
T  23228414 gtttttggaggataaaatgggaggtaggacgaaaaatgcaataaaaatgataattgaaggacaattttgttc-gttttaaaagggcatgatcattttcgt 23228512  T
Q  153 gagtatgccaaaacacgaggaccaaaagtgttattaagcctattcttaa 201  Q
    ||||| ||||||||||| ||||||||||||| |||||||| ||| ||||    
T  23228513 gagtaggccaaaacacggggaccaaaagtgtaattaagccaatttttaa 23228561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 194
Target Start/End: Original strand, 51474753 - 51474881
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| ||||||||||| |||||||||||||||||||||| | || |||  ||||||| ||||||||||| ||| ||||| |||||||||||||||||||    
T  51474753 aaaattgggggtaggacgaaaaatgcaacaaaaatgataactaaaggacaattttgttatgttttaaaagggcatgaccaatttcgtgagtatgccaaaa 51474852  T
Q  166 cacgaggaccaaaagtgttattaagccta 194  Q
    |||| | ||||||||||| ||||||||||    
T  51474853 cacgggaaccaaaagtgtaattaagccta 51474881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 195
Target Start/End: Complemental strand, 37220698 - 37220554
Alignment:
Q  51 gcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttc 150  Q
    |||||||| ||| ||||||||| ||||||||| |||| ||||||||||||||||| |||| |||  |||| |||||||||||||||||| || |  | |     
T  37220698 gcgtttttggaggataaaatggagggtaggacgaaaagtgcaacaaaaatgataactgaaggacaattttattctgttttaaaagagcatgatcgatatt 37220599  T
Q  151 gtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||    
T  37220598 gtgagtaggccaaaatacgaggaccaaaagtgtaattaagcctat 37220554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 32 - 189
Target Start/End: Complemental strand, 24300717 - 24300560
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||||||||| ||||||||| | |||  | ||||| || ||| |||| |||| ||||||||||||||||||||||  |||||||| |||||||||    
T  24300717 ctaaaactgtcatttctctgcgtttctggagtttgaaaataggaggtgggacgaaaattgcaacaaaaatgataattgaagaaccgttttattctgtttt 24300618  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||||  ||||||||||||||||| || |||||||||||| |||||||| ||| |||||    
T  24300617 aaaaggacaggaccagtttcgtgaataagccaaaacacga-gaccaaaaatgtaattaa 24300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 78 - 191
Target Start/End: Complemental strand, 51473542 - 51473429
Alignment:
Q  78 aggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaa 177  Q
    |||||||||| |||||||||||||||||  ||| |||  ||||||||||||||||||| ||||||||| |||||||| ||  ||||||||||||||||||    
T  51473542 aggaccaaaagtgcaacaaaaatgataaccgaaggacaattttgttctgttttaaaagggcaggaccaatttcgtgaatagaccaaaacacgaggaccaa 51473443  T
Q  178 aagtgttattaagc 191  Q
    |||||| |||||||    
T  51473442 aagtgtaattaagc 51473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 52 - 179
Target Start/End: Original strand, 32697106 - 32697232
Alignment:
Q  52 cgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcg 151  Q
    ||||||| ||| ||||||||||| ||||||| |||||||||||||||||||||||||||  ||  ||||||||||||||||||| ||  ||| | |||||    
T  32697106 cgtttttggaggataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaagcacaattttgttctgttttaaaagggcgtgactaatttcg 32697204  T
Q  152 tgagtatgccaaaacacgaggaccaaaa 179  Q
    |||||| || ||||||||||||||||||    
T  32697205 tgagtaggctaaaacacgaggaccaaaa 32697232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 41047083 - 41047218
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    ||||||||| ||||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| || |||||| |||||||||    
T  41047083 ctaaaactgccatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaagga-cgttttattctgtttt 41047181  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaaca 167  Q
    |||||  ||| |||||||||||||||| |||||||||    
T  41047182 aaaaggacagaaccagtttcgtgagtaggccaaaaca 41047218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 59 - 157
Target Start/End: Original strand, 18010157 - 18010255
Alignment:
Q  59 tgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagta 157  Q
    |||| ||||||||| ||| ||||| |||||||||||||||||||||||||||| ||  ||||||||||||||||||| || | |||| |||||||||||    
T  18010157 tgaggataaaatggagggcaggacgaaaaatgcaacaaaaatgataattgaataacaattttgttctgttttaaaagggcggaaccattttcgtgagta 18010255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 47 - 190
Target Start/End: Original strand, 25420541 - 25420684
Alignment:
Q  47 atctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccag 146  Q
    |||||| |||||  || ||||||||||||||| ||| ||||||||||||||||| ||||||||| |||  |||| |||| ||||||||| ||  || ||     
T  25420541 atctgcatttttgaaggataaaatggggggtatgacgaaaaatgcaacaaaaataataattgaaggacaattttattctattttaaaagggcgtgatcaa 25420640  T
Q  147 tttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    ||||||||||| | ||||| |||| || ||||||||| ||||||    
T  25420641 tttcgtgagtaggtcaaaatacgatgatcaaaagtgtaattaag 25420684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 116 - 195
Target Start/End: Original strand, 37222040 - 37222119
Alignment:
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    |||||||||||||||||||  ||||||||| ||| ||||||| | ||||||||||||||||||||||| |||||||||||    
T  37222040 gttttgttctgttttaaaatggcaggaccaattttgtgagtagggcaaaacacgaggaccaaaagtgtaattaagcctat 37222119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 65 - 181
Target Start/End: Complemental strand, 25419273 - 25419155
Alignment:
Q  65 taaaatggggggtaggaccaaaaatgcaacaaaaa-tgataattgaatg-accgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgcca 162  Q
    |||||||||||  ||||| |||| ||||| ||||| ||||||||||| | || |||||||||||||||||||| |||| || | ||||||||||| || |    
T  25419273 taaaatgggggtaaggactaaaactgcaaaaaaaaatgataattgaaaggacagttttgttctgttttaaaagggcagaactaatttcgtgagtaagcta 25419174  T
Q  163 aaacacgaggaccaaaagt 181  Q
    |||||||| ||||||||||    
T  25419173 aaacacgaagaccaaaagt 25419155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 181
Target Start/End: Complemental strand, 23227398 - 23227273
Alignment:
Q  50 tgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagttt 149  Q
    ||||||||| ||| ||||||||||| | ||||| ||||||||||||||||||| ||||| | |||   |||||||||||| |       ||||||| |||    
T  23227398 tgcgtttttggaggataaaatggggagaaggacgaaaaatgcaacaaaaatgaaaattggaggacaaatttgttctgtttca------gaggaccatttt 23227305  T
Q  150 cgtgagtatgccaaaacacgaggaccaaaagt 181  Q
    |||||||| ||||||||||   ||||||||||    
T  23227304 cgtgagtaagccaaaacacagagaccaaaagt 23227273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 55192293 - 55192253
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttt 56  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  55192293 agcatagggggtaggtctaaaactgtcatttctctgcgttt 55192253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 49407972 - 49407929
Alignment:
Q  15 tagcatagggggtaggtctaaaactgtcatttatctgcgttttt 58  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  49407972 tagcatagggggtaggtctaaaattgtcatttctctgcgttttt 49407929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 27199878 - 27199838
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttt 56  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  27199878 agcatagggggtaggtctaaaactgatatttatctgcgttt 27199838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 29801592 - 29801532
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatgggggg 76  Q
    |||||| | |||| ||||||||||||||||| ||||| |||||  ||||||||||||||||    
T  29801592 agcatatgaggtatgtctaaaactgtcatttctctgcatttttgaagaataaaatgggggg 29801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 37075864 - 37075824
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttt 56  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  37075864 agcatagggggtaggtctaaaacggtcatttctctgcgttt 37075824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 27200062 - 27200102
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttt 56  Q
    |||||| |||||||||||||| ||||||||| |||||||||    
T  27200062 agcataaggggtaggtctaaacctgtcatttctctgcgttt 27200102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 36701284 - 36701244
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttt 56  Q
    |||||| || |||||||||||| ||||||||||||||||||    
T  36701284 agcatacggcgtaggtctaaaattgtcatttatctgcgttt 36701244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 1841 - 1664
Alignment:
Q  18 catagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgt 117  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| || | |    
T  1841 catagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgataattgaaggaacat 1742  T
Q  118 tttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||    
T  1741 tttgttctgttttaaaagggcaggaccagtttcgtgagtaggccaaaacaggaggaccaaaagtgtaattaagcctat 1664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 2051 - 2214
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||||| |||||| ||||||||| | |||  | ||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2051 ctaaaactttcatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 2150  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    ||||| |||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||    
T  2151 aaaagggcaggaccagtttcgtaagtaggccaaaacacgaggaccaaaagtgtaattaagccta 2214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 138; Significance: 4e-72; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 64478 - 64301
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||    
T  64478 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgataattgaaggacc 64379  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||||||||||||||||||  ||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  64378 gttttgttctgttttaaaaggtcaggatcagtttcgtgagtatgtcaaaacacgaggaccaaaagtgtaattaagcct 64301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 77 - 189
Target Start/End: Original strand, 64735 - 64847
Alignment:
Q  77 taggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacca 176  Q
    |||||| |||||||||||||||||||||||| || |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  64735 taggacgaaaaatgcaacaaaaatgataattaaaggaccgttttgttctgttttaaaagggcgggaccagtttcgtgagtatgccaaaacacgaggacca 64834  T
Q  177 aaagtgttattaa 189  Q
    ||||||| |||||    
T  64835 aaagtgtaattaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 205738 - 205911
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| |||   ||||| ||  ||||||| |||| ||||| ||| |||||| || |  |||     
T  205738 agcatagggggtaggtctaaaactgccatttctctgcgtttttggagttgaaaataggacgtaggactaaaactgcaa-aaacatgatagtttagggacg 205836  T
Q  116 gttttgttctgttttaaaaga-gcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaag 190  Q
    ||||||||| | ||| ||||| ||||||||| ||||||||||  | |||||   |||||| |||||||| ||||||    
T  205837 gttttgttc-gatttgaaagaggcaggaccattttcgtgagttggtcaaaatgtgaggactaaaagtgtaattaag 205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 134042 - 134220
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||| || |    
T  134042 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaaatgttaattgaaggatc 134141  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||| ||||||| ||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  134142 gttttgttctgtattaaaagggcatgactagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagccta 134220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 195
Target Start/End: Complemental strand, 928 - 750
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||| |||||| |||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||    
T  928 agcataaggggtatgtctaaaactgttatttctctgcgtttttggagaataaaatggggggtaggacgaaaaatgcaacaaaa-tgataattgaaggacc 830  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    |||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| |||||||||||| |||||| ||||    
T  829 gttttgttctgttttaaaagggcaggaccagtatcgtgagtaggccaaaacacgaagaccaaaagtgtaattaagtctat 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 1116 - 1286
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttg 121  Q
    ||||| |||||||||||| ||||| ||||||||| | | |  | ||||| || |||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  1116 ggggtgggtctaaaactgccatttttctgcgtttctggggtttgaaaataggaggtaggacgaaagatgcaacaaaaatgataattgaaggaccgttttg 1215  T
Q  122 ttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  1216 ttctgttttaaaagggcaggaccagtttcgtgagtaagccaaaacacgaggactaaaagtgtaattaagcc 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 194
Target Start/End: Original strand, 42528 - 42705
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||| ||||||| |||||||||||||| |||| ||||    
T  42528 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatgggg-gtaggacgaaaaatgaaacaaaaatgataactgaaggacc 42626  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagccta 194  Q
    |||||||||||||||||||| |||| | ||||||| ||||||  ||||||||||||| |||||||| | ||||||||||    
T  42627 gttttgttctgttttaaaagggcagaatcagtttcctgagtagaccaaaacacgaggnccaaaagtataattaagccta 42705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 23 - 189
Target Start/End: Complemental strand, 42339 - 42172
Alignment:
Q  23 ggggtaggtctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttg 121  Q
    |||||||||||||||||||||||| ||||||||| |  ||  | ||||| || |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  42339 ggggtaggtctaaaactgtcatttctctgcgtttctgaagtttgaaaataggaggtatgacaaaaaatgcaacaaaaatgataattgaatgaccgttttg 42240  T
Q  122 ttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||||||||||||  |||||| ||||||||||| ||  |||||||||||| || |||||||| |||||    
T  42239 ttctgttttaaaatggcaggatcagtttcgtgattagaccaaaacacgagaactaaaagtgtaattaa 42172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 10242 - 10414
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    |||||||||||||||| |||||||||||||| ||||  ||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||    
T  10242 agcatagggggtaggtttaaaactgtcatttctctgaatttttggagaataaaatgggg-gtaggacgaaaaatgcaacaaaaatgataattgaaggacc 10340  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
    |||||||||||||||||||| | |  ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  10341 gttttgttctgttttaaaagggaaacaccagtttcgtgagtagaccaaaacacgaggaccaaaagtgtaattaa 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 85 - 189
Target Start/End: Complemental strand, 10039 - 9935
Alignment:
Q  85 aaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgtt 184  Q
    |||||| ||||||| ||||||||||| |||| ||||||||| | ||||||| ||| || ||||||||||| || || |||||||||||||||||| |||     
T  10039 aaaatgtaacaaaattgataattgaaggaccattttgttctatcttaaaagggcaagatcagtttcgtgaataggctaaaacacgaggaccaaaaatgta 9940  T
Q  185 attaa 189  Q
    |||||    
T  9939 attaa 9935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 110; Significance: 2e-55; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 10797 - 10640
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||| ||||||||||| ||||||||| ||||| ||||    
T  10797 agcatagggggtacgtctaaaactgtcatttctctgcatttttggagaataaaatggagggtaggacgaaaaatgcaacgaaaatgatacttgaaggacc 10698  T
Q  116 gttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgagga 173  Q
    |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  10697 gttttgttctgttttaaaagggcaggaccagtttcatgagtaggccaaaacacgagga 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 66 - 192
Target Start/End: Original strand, 11042 - 11168
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||| |||| |||||||    
T  11042 aaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggaccgttttgttatgttttaaaagggcaggaccagtttcgtaagtaggccaaaa 11141  T
Q  166 cacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||||||| ||||||||    
T  11142 cacgaggaccaaaagtgtaattaagcc 11168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 25 - 193
Target Start/End: Complemental strand, 19001 - 18834
Alignment:
Q  25 ggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttc 124  Q
    |||| |||||||||||| |||| ||||||||||| |||||||||||||||| |||||  |||||||||||||||||||||||||||  |||||||||||     
T  19001 ggtaagtctaaaactgttatttctctgcgtttttggagaataaaatggggg-taggatgaaaaatgcaacaaaaatgataattgaagcaccgttttgtta 18903  T
Q  125 tgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcct 193  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||  |||||||||||||| || ||||||    
T  18902 tgttttaaaagggcaagaccagtttcgtgagtaggccaaaacagaaggaccaaaagtgtaatgaagcct 18834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 19069 - 19166
Alignment:
Q  95 aaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcc 192  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  19069 aaaaatgataattgaaggaccgttttgttctgttttaaaagggcaggacaagtttcgtgagtaggccaaaacacgaggaccaaaagtgtaattaagcc 19166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 28662 - 28789
Alignment:
Q  66 aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaa 165  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||||||    
T  28662 aaaatggggggaaggacgaaaactgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagggcatgaccagtttcgtaagtaggccaaaa 28761  T
Q  166 cacgaggaccaaaagtgttattaagcct 193  Q
    ||||| |||||||||||| |||| ||||    
T  28762 cacgatgaccaaaagtgtaattatgcct 28789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 16672 - 16564
Alignment:
Q  16 agcatagggggtaggtctaaaactgtcatttatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgacc 115  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||    
T  16672 agcatagggggtaggtctaaaactgtcatttctctgcgtttttggagaataaaatggggggtatgacgaaaaatgcaacaaaaatgatacttgaaggacc 16573  T
Q  116 gttttgttc 124  Q
    |||||||||    
T  16572 gttttgttc 16564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 16880 - 17024
Alignment:
Q  32 ctaaaactgtcatttatctgcgttttttgagaat-aaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgtttt 130  Q
    |||||||||| |||| ||||||||| | |||  | ||||| || |||||||| ||||||||||||||||||||||||||| |||  ||||||||||||||    
T  16880 ctaaaactgtaatttctctgcgtttctggagtttgaaaataggaggtaggacgaaaaatgcaacaaaaatgataattgaaggacaattttgttctgtttt 16979  T
Q  131 aaaagagcaggaccagtttcgtgagtatgccaaaacacgaggacc 175  Q
    ||||  || ||| |||||||||||||| | |||||||||||||||    
T  16980 aaaatggcgggatcagtttcgtgagtaagtcaaaacacgaggacc 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 50 - 191
Target Start/End: Complemental strand, 709 - 568
Alignment:
Q  50 tgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagttt 149  Q
    ||||||||| ||| || ||||||| |||  ||| |||||| |||||||||||||||||||| ||| |||||||||||||||||||| ||| || || |||    
T  709 tgcgtttttggaggatcaaatgggaggtgagacgaaaaatacaacaaaaatgataattgaaggacagttttgttctgttttaaaagggcatgatcatttt 610  T
Q  150 cgtgagtatgccaaaacacgaggaccaaaagtgttattaagc 191  Q
    |||||||| ||||||||||||||| ||||||||| |||||||    
T  609 cgtgagtaggccaaaacacgaggatcaaaagtgtaattaagc 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1696 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 51 - 179
Target Start/End: Complemental strand, 589 - 462
Alignment:
Q  51 gcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttc 150  Q
    |||||||||||| |||||||||| | |||||| ||||||||||||||||||||||||||| |||  || |||| |||||||||||| || ||||| ||||    
T  589 gcgttttttgaggataaaatgggtg-taggacgaaaaatgcaacaaaaatgataattgaaggacgattatgttttgttttaaaagatcatgaccattttc 491  T
Q  151 gtgagtatgccaaaacacgaggaccaaaa 179  Q
    ||||||| |||||||||||| ||||||||    
T  490 gtgagtaggccaaaacacgaagaccaaaa 462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 189
Target Start/End: Original strand, 61857 - 62000
Alignment:
Q  46 tatctgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggacca 145  Q
    |||| |||||||| ||| | ||||||||||||||||| ||||||  ||||||||||||| ||||||||   ||||||||| ||||||||| | |||||||    
T  61857 tatcagcgtttttggaggacaaaatggggggtaggacgaaaaatataacaaaaatgatatttgaatgatgattttgttctattttaaaagggtaggacca 61956  T
Q  146 gtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaa 189  Q
     |||||||||||  |||||||||||||| ||||||||| |||||    
T  61957 ttttcgtgagtagaccaaaacacgaggatcaaaagtgtaattaa 62000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 61102 - 61025
Alignment:
Q  118 tttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttattaagcctat 195  Q
    |||||||| ||||||||  |||||| || ||||||||||| ||||||||||||||| |||||||||  ||||||||||    
T  61102 tttgttctattttaaaatggcaggatcattttcgtgagtaggccaaaacacgaggatcaaaagtgtacttaagcctat 61025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 7691 - 7776
Alignment:
Q  50 tgcgttttttgagaataaaatggggggtaggaccaaaaatgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaag 135  Q
    ||||||||| ||| ||||||| ||||||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||||||    
T  7691 tgcgtttttggaggataaaatagggggtaggacgaaaaatgcaacaaaaatgataactgaacgacagttttgttctgttttaaaag 7776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 8451 - 8551
Alignment:
Q  89 tgcaacaaaaatgataattgaatgaccgttttgttctgttttaaaagagcaggaccagtttcgtgagtatgccaaaacacgaggaccaaaagtgttatta 188  Q
    |||||||||||||||||||||| |||||||||| | ||||||||||| | |||||||||||||| ||||  |||||||| || |||||||||||| ||||    
T  8451 tgcaacaaaaatgataattgaaggaccgttttgctgtgttttaaaagggtaggaccagtttcgtaagtagaccaaaacatgaagaccaaaagtgtaatta 8550  T
Q  189 a 189  Q
    |    
T  8551 a 8551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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