View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3675_low_25 (Length: 245)
Name: NF3675_low_25
Description: NF3675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3675_low_25 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 35771612 - 35771848
Alignment:
| Q |
1 |
cgcttaaggctaagtggaagcaatgttgagagtttgataccaaacataaaaaatctcaacaacctcaaagaactaaggttagactactgcaagaaactcg |
100 |
Q |
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| T |
35771612 |
cgcttaaggctaagtggaagcaatgttgagagtttgacaccaaacataaaaaatctcaacaacctcaaagaactaaggttagactactgcaagaaactcg |
35771711 |
T |
|
| Q |
101 |
tgtccgtatctgtgtctgactttccaccgtcactgcgattgtttagtgctattaactgcatttctcttgtcactgaccttactacattggacataccctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35771712 |
tgtccgtatctgtgtctgactttccaccgtcactgcgattgtttagtgctattaactgcatttctcttgtcactgaccttactacattggacataccctt |
35771811 |
T |
|
| Q |
201 |
tgaacatagatcgaaacctcaaccatatcctcaatct |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
35771812 |
tgaacatagatcgaaacctcaaccatatcctcaatct |
35771848 |
T |
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