View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3676_high_23 (Length: 251)
Name: NF3676_high_23
Description: NF3676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3676_high_23 |
 |  |
|
| [»] chr4 (13 HSPs) |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 5 - 251
Target Start/End: Complemental strand, 26436143 - 26435897
Alignment:
| Q |
5 |
aaaataaaaagactaatggtgcataaacagacatagtaacaacctataggaaactagttttcaaatctaagaactagtaaacttagtgacagccttggta |
104 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
26436143 |
aaaaaaaaaagactaatggtgcataaacagacatagtaacaacctataggaaactagatctcaaatctaagaactggtaaacttagtgacagccttggta |
26436044 |
T |
 |
| Q |
105 |
ccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctgaatttcccttgaagtgattgttggcttcttattgtacctag |
204 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | || |
|
|
| T |
26436043 |
ccctcagaaacatcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctgaatttcccttgaagtgattgttggcttcttgttgtaacgag |
26435944 |
T |
 |
| Q |
205 |
cgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
| || || |||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
26435943 |
caagtctggaagattcttgagtgagtttctcgaagatatcattgatg |
26435897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 59 - 251
Target Start/End: Complemental strand, 26434309 - 26434117
Alignment:
| Q |
59 |
tagttttcaaatctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcg |
158 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26434309 |
tagttttcaaatctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcg |
26434210 |
T |
 |
| Q |
159 |
gtctgaatttcccttgaagtgattgttggcttcttattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| | ||| || || || ||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
26434209 |
gtctgaatttcccttgaagtgattgttggcttcttgttgtaacgagcaagtctggatgattcttgagcgagtttctcgaagatatcattgatg |
26434117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 59 - 251
Target Start/End: Complemental strand, 26833020 - 26832828
Alignment:
| Q |
59 |
tagttttcaaatctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcg |
158 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26833020 |
tagttttcaaatctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcg |
26832921 |
T |
 |
| Q |
159 |
gtctgaatttcccttgaagtgattgttggcttcttattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| | ||| || || || ||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
26832920 |
gtctgaatttcccttgaagtgattgttggcttcttgttgtaacgagcaagtctggatgattcttgagcgagtttctcgaagatatcattgatg |
26832828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 65 - 251
Target Start/End: Complemental strand, 24307502 - 24307316
Alignment:
| Q |
65 |
tcaaatctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctga |
164 |
Q |
| |
|
|||||||||||||||||| ||||| || ||||| |||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |||||| |
|
|
| T |
24307502 |
tcaaatctaagaactagtgaacttggtcacagctttggtaccctcagaaacagcatgcttggccaattcaccaggaagaacaagtctgacagcagtctga |
24307403 |
T |
 |
| Q |
165 |
atttcccttgaagtgattgttggcttcttattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| | ||| || || || ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
24307402 |
atttcccttgaagtgattgttggcttcttgttgtaacgagcaagtctggatgattcttgagctagtttctcgaagatatcattgatg |
24307316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 63 - 251
Target Start/End: Original strand, 23415706 - 23415894
Alignment:
| Q |
63 |
tttcaaatctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtct |
162 |
Q |
| |
|
|||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| || |||| |
|
|
| T |
23415706 |
tttcaagtctaagagctagtaaacttagtcacagccttggtaccctcagaaacagcatgcttggccaattcaccaggaagaacaagtctgactgcagtct |
23415805 |
T |
 |
| Q |
163 |
gaatttcccttgaagtgattgttggcttcttattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| | ||| || || || ||||| ||||| || ||||||||||||||||||||| |
|
|
| T |
23415806 |
gaatttcccttgaagtgattgttggcttcttgttgtaacgagcaagtctggatgattcttgagcaagcttctcgaagatatcattgatg |
23415894 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 70 - 251
Target Start/End: Original strand, 23408544 - 23408725
Alignment:
| Q |
70 |
tctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctgaatttc |
169 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||| || |||||||||||||||||||||||||| || || |||||||| |||||||||||||||||||| |
|
|
| T |
23408544 |
tctaagagctagtaaacttagtcacagccttggtgccttcagaaacagcatgcttggccaattctccaggaagaacaagtctgaccgcggtctgaatttc |
23408643 |
T |
 |
| Q |
170 |
ccttgaagtgattgttggcttcttattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
|||||||||||||||||||||||| ||||| | ||| || || || ||||| ||||| || ||||||||||||||||||||| |
|
|
| T |
23408644 |
ccttgaagtgattgttggcttcttgttgtaacgagcaagtctggatgattcttgagcaagcttctcgaagatatcattgatg |
23408725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 251
Target Start/End: Complemental strand, 23886105 - 23885920
Alignment:
| Q |
66 |
caaatctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctgaa |
165 |
Q |
| |
|
||||||||||||||||||||||| || ||||| ||||| |||||||| ||||||||||||||||||||||| || |||||||||||||| || ||||||| |
|
|
| T |
23886105 |
caaatctaagaactagtaaacttggtcacagctttggttccctcagagacagcatgcttggccaattcaccaggaagaacaagcctgactgcagtctgaa |
23886006 |
T |
 |
| Q |
166 |
tttcccttgaagtgattgttggcttcttattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| | ||| || || || ||||| ||||| || ||||||||||||||||||||| |
|
|
| T |
23886005 |
tttcccttgaagtgattgttggcttcttgttgtaacgagcaagtctggatgattcttgagcaagcttctcgaagatatcattgatg |
23885920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 69 - 251
Target Start/End: Original strand, 23453375 - 23453557
Alignment:
| Q |
69 |
atctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctgaattt |
168 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||| || |||||||| ||||| || |||||||||| |
|
|
| T |
23453375 |
atctaagaactagtaaacttggtcacagccttggtgccttcagaaacagcatgcttggccaattcaccaggaagaacaagactgactgcagtctgaattt |
23453474 |
T |
 |
| Q |
169 |
cccttgaagtgattgttggcttcttattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
||||||||||||||||||||||||| ||||| | ||| || || || ||||| ||||| || ||||||||||||||||||||| |
|
|
| T |
23453475 |
cccttgaagtgattgttggcttcttgttgtaacgagcaagtctggatgattcttgagcaagcttctcgaagatatcattgatg |
23453557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 67 - 251
Target Start/End: Complemental strand, 23402351 - 23402167
Alignment:
| Q |
67 |
aaatctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctgaat |
166 |
Q |
| |
|
|||||||||||||||||||||| || ||||| ||||| ||||| || ||||||||||||||||||||||| || |||||||||||||| || |||||||| |
|
|
| T |
23402351 |
aaatctaagaactagtaaacttggtcacagctttggttccctctgagacagcatgcttggccaattcaccaggaagaacaagcctgactgcagtctgaat |
23402252 |
T |
 |
| Q |
167 |
ttcccttgaagtgattgttggcttcttattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| | ||| || || || ||||| ||||| || ||||||||||||||||||||| |
|
|
| T |
23402251 |
ttcccttgaagtgattgttggcttcttgttgtaacgagcaagtctggatgattcttgagcaagcttctcgaagatatcattgatg |
23402167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 69 - 251
Target Start/End: Complemental strand, 23869007 - 23868825
Alignment:
| Q |
69 |
atctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctgaattt |
168 |
Q |
| |
|
|||||||||||||| |||||||| ||||| || || || |||||||||||||| |||||||||||||| || |||||||| ||||| || |||||||||| |
|
|
| T |
23869007 |
atctaagaactagtgaacttagtcacagcttttgttccttcagaaacagcatgtttggccaattcaccaggaagaacaagtctgacagcagtctgaattt |
23868908 |
T |
 |
| Q |
169 |
cccttgaagtgattgttggcttcttattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
||||||||||||||||||||||||| ||||| | ||| || || || ||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
23868907 |
cccttgaagtgattgttggcttcttgttgtaacgagcaagtctggatgattcttgagcaagtttctcgaagatatcattgatg |
23868825 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 251
Target Start/End: Original strand, 34662044 - 34662226
Alignment:
| Q |
69 |
atctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctgaattt |
168 |
Q |
| |
|
||||||||||| |||||||| || ||||| |||||||||||||| ||||||||||| |||||||| || || ||||||||||| || || |||||||||| |
|
|
| T |
34662044 |
atctaagaacttgtaaacttcgttacagctttggtaccctcagacacagcatgcttagccaattctccaggaagaacaagcctaacagcagtctgaattt |
34662143 |
T |
 |
| Q |
169 |
cccttgaagtgattgttggcttcttattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
|||| ||||| || || |||||||| || ||||| || || || |||||||| ||||| || ||||||||||||||||||||| |
|
|
| T |
34662144 |
ccctcgaagttatcgtcggcttcttgttataccttgcaagtctggaagattcttgagcgagcttctcgaagatatcattgatg |
34662226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 251
Target Start/End: Original strand, 23451788 - 23451917
Alignment:
| Q |
122 |
cttggccaattcaccgggcagaacaagcctgaccgcggtctgaatttcccttgaagtgattgttggcttcttattgtacctagcgagccttgaagattcc |
221 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| | ||| || || || |||| |
|
|
| T |
23451788 |
cttggccaattcaccgggcagaacaagcctgactgcggtctgaatttcccttgaagtgattgttggcttcttgttgtagcgagcaagtctggagtattct |
23451887 |
T |
 |
| Q |
222 |
tgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
||||| || ||||| |||||||| |||||| |
|
|
| T |
23451888 |
tgagcgagcttctcaaagatatcgttgatg |
23451917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 147
Target Start/End: Complemental strand, 31632954 - 31632848
Alignment:
| Q |
41 |
taacaacctataggaaactagttttcaaatctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggc |
140 |
Q |
| |
|
||||||||||||| |||| || | ||||||||||| || || || || || ||| | |||||||||||| ||||| ||||||| ||||||||| ||||| |
|
|
| T |
31632954 |
taacaacctatagtaaacaagatcccaaatctaagagcttgtgaatttggtcacaactttggtaccctcacaaacaacatgcttagccaattcatcgggc |
31632855 |
T |
 |
| Q |
141 |
agaacaa |
147 |
Q |
| |
|
| ||||| |
|
|
| T |
31632854 |
acaacaa |
31632848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 77; Significance: 8e-36; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 33216724 - 33216596
Alignment:
| Q |
65 |
tcaaatctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctga |
164 |
Q |
| |
|
|||||| ||||||| ||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| | |||||||| ||||| || || ||| |
|
|
| T |
33216724 |
tcaaatttaagaaccagtaaacttggtcacagccttggtaccctcagaaacagcatgtttggccaattcaccaagaagaacaagtctgacagcagtttga |
33216625 |
T |
 |
| Q |
165 |
atttcccttgaagtgattgttggcttctt |
193 |
Q |
| |
|
|||| |||||||||||||||||||||||| |
|
|
| T |
33216624 |
attttccttgaagtgattgttggcttctt |
33216596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 251
Target Start/End: Complemental strand, 41670651 - 41670493
Alignment:
| Q |
93 |
acagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctgaatttcccttgaagtgattgttggcttct |
192 |
Q |
| |
|
||||||||||| |||||||| ||||||||||| || | ||||||||| |||||||| | || || ||||| || |||| ||||||||||| ||||||| |
|
|
| T |
41670651 |
acagccttggttccctcagagacagcatgcttagcaagttcaccggggagaacaagacgaacagcagtctgtatctcccgagaagtgattgtaggcttct |
41670552 |
T |
 |
| Q |
193 |
tattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
| |||||||| || || || |||||||||||||| || ||||| ||||||||||||||| |
|
|
| T |
41670551 |
tgttgtacctcgcaagtctggaagattcctgagcgagcttctcaaagatatcattgatg |
41670493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 150
Target Start/End: Complemental strand, 45576506 - 45576397
Alignment:
| Q |
41 |
taacaacctataggaaactagttttcaaatctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggc |
140 |
Q |
| |
|
||||||||||||| |||| || | |||||||||||| || || || || || ||||| |||||||||||||||||| ||||||| ||||||||| ||||| |
|
|
| T |
45576506 |
taacaacctatagtaaacaagatctcaaatctaagagcttgtgaatttggtcacagctttggtaccctcagaaacaacatgcttagccaattcatcgggc |
45576407 |
T |
 |
| Q |
141 |
agaacaagcc |
150 |
Q |
| |
|
|||||||||| |
|
|
| T |
45576406 |
agaacaagcc |
45576397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 251
Target Start/End: Complemental strand, 29391737 - 29391559
Alignment:
| Q |
73 |
aagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctgaatttccct |
172 |
Q |
| |
|
||||||| ||||| || || ||||||||||| || || ||||||||||| || |||||||||||||| ||||| | | || || || ||||| ||||| |
|
|
| T |
29391737 |
aagaactcgtaaatttggtaacagccttggttccttcggaaacagcatgtttcgccaattcaccgggaagaaccaaacgcacagccgtttgaatctccct |
29391638 |
T |
 |
| Q |
173 |
tgaagtgattgttggcttcttattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
|| || || || || ||||| ||||| | ||| | || |||| ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
29391637 |
cgacgtaatcgtcggtttcttgttgtaacgagccaatctagaagcttcctgagcgagtttctcaaagatatcattgatg |
29391559 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 251
Target Start/End: Complemental strand, 40796032 - 40795862
Alignment:
| Q |
81 |
gtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctgaatttcccttgaagtga |
180 |
Q |
| |
|
||||| |||||||| || ||||| ||||| || ||||| |||||||| | ||| ||||| ||||| || | || || |||||||| || | || |||| |
|
|
| T |
40796032 |
gtaaatttagtgactgctttggttccctcggagacagcgtgcttggcaagttcgccgggaagaacgagacgaacagcagtctgaatctcacgagaggtga |
40795933 |
T |
 |
| Q |
181 |
ttgttggcttcttattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatcattgatg |
251 |
Q |
| |
|
| || || ||||| ||||| | |||||| || || ||||||||||| || ||||| ||||| ||||||||| |
|
|
| T |
40795932 |
tggtaggtttcttgttgtagcgagcgagtctggatgattcctgagcgagcttctcaaagatgtcattgatg |
40795862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 47317561 - 47317433
Alignment:
| Q |
65 |
tcaaatctaagaactagtaaacttagtgacagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctga |
164 |
Q |
| |
|
|||||| ||||||||||||||||| || ||||| |||||||||||||||||| |||| |||||||||||||| || |||| ||| ||||| | || ||| |
|
|
| T |
47317561 |
tcaaatttaagaactagtaaacttggtcacagctttggtaccctcagaaacaacatgtttggccaattcaccaggaagaataagtctgacaacagtttga |
47317462 |
T |
 |
| Q |
165 |
atttcccttgaagtgattgttggcttctt |
193 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
47317461 |
atttcccttgaagtgattgttggcttctt |
47317433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 244
Target Start/End: Original strand, 40180297 - 40180448
Alignment:
| Q |
93 |
acagccttggtaccctcagaaacagcatgcttggccaattcaccgggcagaacaagcctgaccgcggtctgaatttcccttgaagtgattgttggcttct |
192 |
Q |
| |
|
|||||||| || || |||||||||||||| || |||||||| || || ||||| | || || || || ||||| ||||| ||||| || || ||||||| |
|
|
| T |
40180297 |
acagccttagtcccttcagaaacagcatgtttagccaattctccaggaagaaccaatctaacagcagtttgaatctccctagaagtaatcgtcggcttct |
40180396 |
T |
 |
| Q |
193 |
tattgtacctagcgagccttgaagattcctgagctagtttctcgaagatatc |
244 |
Q |
| |
|
| || |||||||| | | || ||||||||||| |||||||| |||||||| |
|
|
| T |
40180397 |
tgttatacctagccaaacgagacgattcctgagcgagtttctcaaagatatc |
40180448 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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