View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3676_low_11 (Length: 309)
Name: NF3676_low_11
Description: NF3676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3676_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 84 - 294
Target Start/End: Original strand, 43279481 - 43279690
Alignment:
| Q |
84 |
tcaaatagctggaagtggaaccaaattaagctgctgaaaattgaaaggaaggtgttgaagtataaggaacttgcattttgatacagccacatctttagtt |
183 |
Q |
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| T |
43279481 |
tcaaatagctggaagtggaaccaaattaagctgctgaaaattgaaaggaaggtgttgaagtataaggaacttgcattttgatacagccacatctttagtt |
43279580 |
T |
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| Q |
184 |
tacttattattaattaataaatttggaaaactaaaatgaatgccctacatcttatatccatcgtttgagagggcccaaatcttgattcacccattacagt |
283 |
Q |
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| T |
43279581 |
-actacttattaattaataaatttggaaaactaaaatgaatgccctacatcttatatccatcgtttgagagggcccaaatcttgattcacccattacagt |
43279679 |
T |
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| Q |
284 |
acaaaacttgt |
294 |
Q |
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| T |
43279680 |
acaaaacttgt |
43279690 |
T |
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