View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3676_low_36 (Length: 227)
Name: NF3676_low_36
Description: NF3676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3676_low_36 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 28621526 - 28621744
Alignment:
| Q |
3 |
aacgtcactgacttgtttccttataaattcaacacaaaatttggggagaggagtatgaaaaagatattgacaaaccttagttatagctctgaaatacgag |
102 |
Q |
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| T |
28621526 |
aacgtcactgacttgtttccttataaattcaacacaaaatttggggagaggagtatgaaaaagatattgacaaaccttagttatagctctgaaatacgag |
28621625 |
T |
|
| Q |
103 |
acatcctcctaatgcttatgaaggttttcctgccacttagaattcaactcaaaatttacatcatctagttagatggtgtaaattgtaccgcatagggcat |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
28621626 |
acatcctcctaatgcttatgaaggttttcctgccacttagaattcaactcaaaatttacattatctagttagatggtgtaaattgtaccgcatagggcat |
28621725 |
T |
|
| Q |
203 |
tccgcgcctctatcccttg |
221 |
Q |
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||||||||||||||||||| |
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| T |
28621726 |
tccgcgcctctatcccttg |
28621744 |
T |
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