View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3677_low_10 (Length: 271)
Name: NF3677_low_10
Description: NF3677
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3677_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 18 - 261
Target Start/End: Original strand, 26425382 - 26425625
Alignment:
| Q |
18 |
aaaaccacaatccacccaacattgcttccatgcgtgaatactttgtccatactcaaaatccttcaacttaggccaaagcttagttaaatttttccataag |
117 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26425382 |
aaaaccacaatccacccaacattgtttccatgcgtgaatactttgtccatactcaaaatccttcaacttaggccaaagcttagttaaatttttccataag |
26425481 |
T |
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| Q |
118 |
cataaatcattagacttagctatgacattatcaagatcatgggtaacattacggcaatacttaccttgcataacatcacaccataaagccttctcaccac |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26425482 |
cataaatcattagacttagctatgacattatcaagatcatgggtatcattacggcaatacttaccttgcataacatcacaccataaagccttctcaccac |
26425581 |
T |
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| Q |
218 |
acaaaatcttccatcttattttaataaggcaaagcttggttcat |
261 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
26425582 |
acaaaatcttccatcttattttcataaggcaaagcttggttcat |
26425625 |
T |
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