View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3678_high_13 (Length: 466)

Name: NF3678_high_13
Description: NF3678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3678_high_13
NF3678_high_13
[»] chr5 (11 HSPs)
chr5 (37-452)||(29628453-29628883)
chr5 (243-283)||(15190867-15190907)
chr5 (248-282)||(18150378-18150412)
chr5 (64-102)||(29635128-29635166)
chr5 (245-283)||(40512948-40512986)
chr5 (248-293)||(2795523-2795568)
chr5 (248-293)||(11636731-11636776)
chr5 (248-293)||(30328460-30328505)
chr5 (248-293)||(30839781-30839826)
chr5 (248-293)||(36597579-36597624)
chr5 (250-282)||(28378711-28378743)
[»] chr2 (14 HSPs)
chr2 (248-296)||(10690782-10690830)
chr2 (238-293)||(16919287-16919342)
chr2 (248-281)||(4821282-4821315)
chr2 (248-293)||(5583691-5583736)
chr2 (248-293)||(12016666-12016711)
chr2 (248-293)||(16126692-16126737)
chr2 (248-293)||(19228425-19228470)
chr2 (248-293)||(22705454-22705499)
chr2 (248-293)||(26229986-26230031)
chr2 (248-293)||(27665177-27665222)
chr2 (248-293)||(39904181-39904226)
chr2 (374-418)||(7720253-7720297)
chr2 (374-414)||(19183492-19183532)
chr2 (374-418)||(20566013-20566057)
[»] scaffold0011 (1 HSPs)
scaffold0011 (248-293)||(13085-13130)
[»] chr8 (13 HSPs)
chr8 (248-293)||(13328074-13328119)
chr8 (248-293)||(40210954-40210999)
chr8 (248-296)||(10129103-10129151)
chr8 (374-418)||(34107166-34107210)
chr8 (248-293)||(2161387-2161432)
chr8 (248-293)||(3306188-3306233)
chr8 (248-293)||(7140592-7140637)
chr8 (248-293)||(14816259-14816304)
chr8 (248-293)||(14829436-14829481)
chr8 (248-293)||(33514634-33514679)
chr8 (248-293)||(38527820-38527865)
chr8 (374-414)||(32186324-32186364)
chr8 (249-293)||(35678408-35678452)
[»] chr7 (9 HSPs)
chr7 (248-293)||(24250313-24250358)
chr7 (248-293)||(9331961-9332006)
chr7 (248-293)||(19889340-19889385)
chr7 (248-293)||(33342988-33343033)
chr7 (248-293)||(34270265-34270310)
chr7 (374-418)||(8595035-8595079)
chr7 (249-293)||(19868114-19868158)
chr7 (248-292)||(32117814-32117858)
chr7 (249-293)||(39757243-39757287)
[»] chr6 (6 HSPs)
chr6 (248-293)||(8977600-8977645)
chr6 (248-296)||(33017724-33017772)
chr6 (248-293)||(5363026-5363071)
chr6 (248-293)||(17552720-17552765)
chr6 (248-293)||(26602564-26602609)
chr6 (374-414)||(31069582-31069622)
[»] chr4 (8 HSPs)
chr4 (248-293)||(49228356-49228401)
chr4 (248-283)||(39876808-39876843)
chr4 (248-293)||(9759275-9759320)
chr4 (260-293)||(40681960-40681993)
chr4 (248-293)||(48910968-48911013)
chr4 (248-293)||(50352302-50352347)
chr4 (235-291)||(9327005-9327061)
chr4 (374-418)||(23545614-23545658)
[»] chr3 (7 HSPs)
chr3 (243-293)||(2571263-2571313)
chr3 (248-293)||(11610914-11610959)
chr3 (248-293)||(12515607-12515652)
chr3 (250-283)||(54621361-54621394)
chr3 (248-292)||(3863329-3863373)
chr3 (381-413)||(11671516-11671548)
chr3 (249-293)||(20938057-20938101)
[»] scaffold0061 (1 HSPs)
scaffold0061 (248-293)||(52912-52957)
[»] scaffold0017 (1 HSPs)
scaffold0017 (248-293)||(145677-145722)
[»] chr1 (9 HSPs)
chr1 (248-293)||(313749-313794)
chr1 (248-293)||(1502853-1502898)
chr1 (247-292)||(38539085-38539130)
chr1 (247-292)||(38561303-38561348)
chr1 (248-293)||(39150460-39150505)
chr1 (248-293)||(39627705-39627750)
chr1 (248-293)||(44918024-44918069)
chr1 (248-293)||(51382371-51382416)
chr1 (248-300)||(23576540-23576592)


Alignment Details
Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 37 - 452
Target Start/End: Complemental strand, 29628883 - 29628453
Alignment:
Q  37 taatatattgagaattgtgactttgatattaacaaacatcttagtcacttgttagttgtcatagtttnnnnnnnnttaaaattacattggcttaaaa--- 133  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||          ||||||||||||||||||||       
T  29628883 taatatattgagaattatgactttgatattaacaaacatcttagtcacttgttagttgtcatagctttaaaaaaa--aaaattacattggcttaaaaaaa 29628786  T
Q  134 tatgaccaaatgttaacccttaaatgactcaacaggtgttgatgaatcattaccctcgcaatcagctaatcaaattttatattttatgttgtacaaatat 233  Q
    |||| |||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29628785 tatgcccaaatgttaacccttaaatgactcaacaggcattgacgaatcattaccctcgcaatcagctagtcaaattttatattttatgttgtacaaatat 29628686  T
Q  234 attattttgtatttggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaattaacaannnnnnnattgaaaaataacaatcaattattaa 333  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||       ||||||||||||||||||||||||||    
T  29628685 attattttgtatttggtttgtctagcatgtgcaatattgcacatgctaaataaactaaaattaacaatttttttattgaaaaataacaatcaattattaa 29628586  T
Q  334 aaatttgtatatttaacgtaaaaggtatgagatccaaaac--------------aaacttattaacacatgtaaatttgcacatgatagaaaaattcttc 419  Q
    |||||||||||||||| ||||| || ||||||| ||||||              ||| |||||||||| |||||||||||| ||||||||||||   |||    
T  29628585 aaatttgtatatttaatgtaaatggcatgagattcaaaacaaatttattattttaaatttattaacacgtgtaaatttgcatatgatagaaaaaaatttc 29628486  T
Q  420 tttattttattatttcatgtggtaatgcttttt 452  Q
    ||||||||||||||||||||||||||| |||||    
T  29628485 tttattttattatttcatgtggtaatgtttttt 29628453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 15190867 - 15190907
Alignment:
Q  243 tatttggtttgtctagcatgtgcaatattgcatatgttaag 283  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  15190867 tattgggtttgtctaacatgtgcaatattgcatatgttaag 15190907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 282
Target Start/End: Original strand, 18150378 - 18150412
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaa 282  Q
    |||||||||| ||||||||||||||||||||||||    
T  18150378 ggtttgtctaacatgtgcaatattgcatatgttaa 18150412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 29635166 - 29635128
Alignment:
Q  64 attaacaaacatcttagtcacttgttagttgtcatagtt 102  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  29635166 attaacaaagatcttagtcacttggtagttgtcatagtt 29635128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 40512948 - 40512986
Alignment:
Q  245 tttggtttgtctagcatgtgcaatattgcatatgttaag 283  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  40512948 tttggtttgtctaacatgtgcaatattgcacatgttaag 40512986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 2795523 - 2795568
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  2795523 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 2795568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 11636731 - 11636776
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| |||||||  |||||||||    
T  11636731 ggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaa 11636776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 30328505 - 30328460
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  30328505 ggtttgtctaacatgtgcaatattgcacatgttaagataactaaaa 30328460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 30839781 - 30839826
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  30839781 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 30839826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 36597579 - 36597624
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  36597579 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 36597624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 28378711 - 28378743
Alignment:
Q  250 tttgtctagcatgtgcaatattgcatatgttaa 282  Q
    ||||||||||||||||||||||||| |||||||    
T  28378711 tttgtctagcatgtgcaatattgcacatgttaa 28378743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 10690782 - 10690830
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaatta 296  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||||    
T  10690782 ggtttgtctaacatgtgcaatattgcacatgttaagttaactaaaatta 10690830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 16919342 - 16919287
Alignment:
Q  238 ttttgtatttggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||| |||| |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  16919342 ttttctattgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 16919287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 281
Target Start/End: Original strand, 4821282 - 4821315
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgtta 281  Q
    |||||||||| |||||||||||||||||||||||    
T  4821282 ggtttgtctaacatgtgcaatattgcatatgtta 4821315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 5583736 - 5583691
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  5583736 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 5583691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 12016666 - 12016711
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  12016666 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 12016711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 16126737 - 16126692
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  16126737 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 16126692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 19228425 - 19228470
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  19228425 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 19228470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 22705454 - 22705499
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  22705454 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 22705499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 26230031 - 26229986
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  26230031 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 26229986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 27665222 - 27665177
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  27665222 ggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaa 27665177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 39904226 - 39904181
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  39904226 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 39904181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 418
Target Start/End: Original strand, 7720253 - 7720297
Alignment:
Q  374 aaacttattaacacatgtaaatttgcacatgatagaaaaattctt 418  Q
    |||||| ||||||| || |||||||||||||||||||||| ||||    
T  7720253 aaactttttaacacgtgcaaatttgcacatgatagaaaaactctt 7720297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 19183492 - 19183532
Alignment:
Q  374 aaacttattaacacatgtaaatttgcacatgatagaaaaat 414  Q
    |||||| |||||| ||||||||||| |||||||||||||||    
T  19183492 aaacttcttaacatatgtaaatttgtacatgatagaaaaat 19183532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 418
Target Start/End: Complemental strand, 20566057 - 20566013
Alignment:
Q  374 aaacttattaacacatgtaaatttgcacatgatagaaaaattctt 418  Q
    |||||| ||||||  ||||||||||||||||||||||||| ||||    
T  20566057 aaacttcttaacatgtgtaaatttgcacatgatagaaaaactctt 20566013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 13085 - 13130
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||    
T  13085 ggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaa 13130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000007; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 13328119 - 13328074
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||    
T  13328119 ggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaa 13328074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 40210999 - 40210954
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||    
T  40210999 ggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaa 40210954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 10129103 - 10129151
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaatta 296  Q
    |||||||||| |||||||||||||||| ||||||||  |||||||||||    
T  10129103 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaatta 10129151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 418
Target Start/End: Complemental strand, 34107210 - 34107166
Alignment:
Q  374 aaacttattaacacatgtaaatttgcacatgatagaaaaattctt 418  Q
    |||||| |||||| ||||||||||||| |||||||||||||||||    
T  34107210 aaacttcttaacatatgtaaatttgcatatgatagaaaaattctt 34107166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 2161387 - 2161432
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  2161387 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 2161432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 3306233 - 3306188
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  3306233 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 3306188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 7140637 - 7140592
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  7140637 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 7140592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 14816304 - 14816259
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| |||||||  |||||||||    
T  14816304 ggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaa 14816259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 14829436 - 14829481
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| |||||||  |||||||||    
T  14829436 ggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaa 14829481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 33514679 - 33514634
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||| ||| |||||||||||||||| |||||||| |||||||||    
T  33514679 ggtttgcctaacatgtgcaatattgcacatgttaaggaaactaaaa 33514634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 38527820 - 38527865
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  38527820 ggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaa 38527865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 414
Target Start/End: Original strand, 32186324 - 32186364
Alignment:
Q  374 aaacttattaacacatgtaaatttgcacatgatagaaaaat 414  Q
    ||||||||||||| ||| ||||||||||| |||||||||||    
T  32186324 aaacttattaacatatgcaaatttgcacacgatagaaaaat 32186364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 35678452 - 35678408
Alignment:
Q  249 gtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    ||||||||| |||||||||||||||| |||||||  |||||||||    
T  35678452 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaa 35678408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000007; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 24250313 - 24250358
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| |||||||| |||||||||    
T  24250313 ggtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaa 24250358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 9331961 - 9332006
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  9331961 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 9332006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 19889340 - 19889385
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  19889340 ggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaa 19889385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 33342988 - 33343033
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  33342988 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 33343033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 34270265 - 34270310
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  34270265 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 34270310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 418
Target Start/End: Original strand, 8595035 - 8595079
Alignment:
Q  374 aaacttattaacacatgtaaatttgcacatgatagaaaaattctt 418  Q
    |||||| ||||||  ||||||||||||||||||||||||| ||||    
T  8595035 aaacttcttaacatgtgtaaatttgcacatgatagaaaaactctt 8595079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 19868114 - 19868158
Alignment:
Q  249 gtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    ||||||||| |||||||||||||||| ||||||||  ||||||||    
T  19868114 gtttgtctaacatgtgcaatattgcacatgttaagacaactaaaa 19868158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 32117814 - 32117858
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaa 292  Q
    ||||| |||| |||||||||||||||| |||||||| ||||||||    
T  32117814 ggtttatctaacatgtgcaatattgcacatgttaaggaaactaaa 32117858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 39757287 - 39757243
Alignment:
Q  249 gtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    ||||||||| |||||||||||||||| ||||||||  ||||||||    
T  39757287 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 39757243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 8977645 - 8977600
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| |||||||| |||||||||    
T  8977645 ggtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaa 8977600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 33017724 - 33017772
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaatta 296  Q
    |||||||||| |||||||||||||||| ||||||||  |||||||||||    
T  33017724 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaatta 33017772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 5363071 - 5363026
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  5363071 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 5363026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 17552765 - 17552720
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  17552765 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 17552720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 26602609 - 26602564
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| || ||||| |||||||||    
T  26602609 ggtttgtctaacatgtgcaatattgcacatattaaggaaactaaaa 26602564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 414
Target Start/End: Complemental strand, 31069622 - 31069582
Alignment:
Q  374 aaacttattaacacatgtaaatttgcacatgatagaaaaat 414  Q
    |||||| ||||||  ||||||||||||||||||||||||||    
T  31069622 aaacttcttaacatgtgtaaatttgcacatgatagaaaaat 31069582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000007; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 49228356 - 49228401
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||    
T  49228356 ggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaa 49228401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 39876808 - 39876843
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaag 283  Q
    |||||||||| |||||||||||||||||||||||||    
T  39876808 ggtttgtctaacatgtgcaatattgcatatgttaag 39876843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 9759320 - 9759275
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  9759320 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 9759275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 293
Target Start/End: Original strand, 40681960 - 40681993
Alignment:
Q  260 atgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    ||||||||||||||||||||||||| ||||||||    
T  40681960 atgtgcaatattgcatatgttaagtcaactaaaa 40681993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 48911013 - 48910968
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  48911013 ggtttgtctaacatgtgcaatattgcacatgttaagataactaaaa 48910968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 50352302 - 50352347
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  50352302 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 50352347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 9327061 - 9327005
Alignment:
Q  235 ttattttgtatttggtttgtctagcatgtgcaatattgcatatgttaagtaaactaa 291  Q
    ||||||| | || |||||||||| ||| ||||||||||||||||||||  |||||||    
T  9327061 ttatttttttttgggtttgtctaacatatgcaatattgcatatgttaaagaaactaa 9327005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 418
Target Start/End: Original strand, 23545614 - 23545658
Alignment:
Q  374 aaacttattaacacatgtaaatttgcacatgatagaaaaattctt 418  Q
    |||||||||||||  || |||||||||||||||||||||| ||||    
T  23545614 aaacttattaacatgtgcaaatttgcacatgatagaaaaactctt 23545658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 31; Significance: 0.00000004; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 2571263 - 2571313
Alignment:
Q  243 tatttggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||| |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  2571263 tattgggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 2571313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 11610914 - 11610959
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  11610914 ggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaa 11610959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 12515652 - 12515607
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  12515652 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 12515607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 54621394 - 54621361
Alignment:
Q  250 tttgtctagcatgtgcaatattgcatatgttaag 283  Q
    |||||||| |||||||||||||||||||||||||    
T  54621394 tttgtctaacatgtgcaatattgcatatgttaag 54621361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 292
Target Start/End: Original strand, 3863329 - 3863373
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaa 292  Q
    |||||||||| |||||||||||||||| ||||||||  |||||||    
T  3863329 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaa 3863373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 413
Target Start/End: Complemental strand, 11671548 - 11671516
Alignment:
Q  381 ttaacacatgtaaatttgcacatgatagaaaaa 413  Q
    ||||||||||||||||| |||||||||||||||    
T  11671548 ttaacacatgtaaatttccacatgatagaaaaa 11671516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 20938057 - 20938101
Alignment:
Q  249 gtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    ||||||||| |||||||||||||||| ||||||||  ||||||||    
T  20938057 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 20938101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 52957 - 52912
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  52957 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 52912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 145677 - 145722
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  145677 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 145722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 30; Significance: 0.0000002; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 313749 - 313794
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  313749 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 313794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 1502898 - 1502853
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  1502898 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 1502853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 38539085 - 38539130
Alignment:
Q  247 tggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaa 292  Q
    |||||| |||| |||||||||||||||| |||||||| ||||||||    
T  38539085 tggtttatctaacatgtgcaatattgcacatgttaaggaaactaaa 38539130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 292
Target Start/End: Original strand, 38561303 - 38561348
Alignment:
Q  247 tggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaa 292  Q
    |||||| |||| |||||||||||||||| |||||||| ||||||||    
T  38561303 tggtttatctaacatgtgcaatattgcacatgttaaggaaactaaa 38561348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 39150505 - 39150460
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  39150505 ggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaa 39150460  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 39627750 - 39627705
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| ||||||||||||| || |||||||| |||||||||    
T  39627750 ggtttgtctaacatgtgcaatattacacatgttaaggaaactaaaa 39627705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 44918024 - 44918069
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  44918024 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 44918069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 293
Target Start/End: Original strand, 51382371 - 51382416
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaa 293  Q
    |||||||||| |||||||||||||||| ||||||||  ||||||||    
T  51382371 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaa 51382416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 23576592 - 23576540
Alignment:
Q  248 ggtttgtctagcatgtgcaatattgcatatgttaagtaaactaaaattaacaa 300  Q
    |||||||||| ||| |||||||||||| ||||||||  |||||||| ||||||    
T  23576592 ggtttgtctaacatctgcaatattgcacatgttaaggtaactaaaagtaacaa 23576540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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