View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3678_low_19 (Length: 399)
Name: NF3678_low_19
Description: NF3678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3678_low_19 |
 | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 351; Significance: 0; HSPs: 31)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 11 - 381
Target Start/End: Original strand, 10889232 - 10889601
Alignment:
| Q |
11 |
cagagagcagcactaggaataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatga |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10889232 |
cagagagcagcactaggaataacaatatcggtgttgttgcaattttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaatgatga |
10889331 |
T |
|
| Q |
111 |
aaaagttcaagagcactttgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttca |
210 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10889332 |
aaaagttcaagagcactttgatctcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtgacttca |
10889431 |
T |
|
| Q |
211 |
agagcttgggaaaacaataatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatg |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10889432 |
agagcttgggaaaacaataatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatg |
10889531 |
T |
|
| Q |
311 |
acaattataatgattgggattgaacttgtaactcctttgattaatggaaacagtggaagcagggtcgtcat |
381 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10889532 |
acaattataatgattggga-tgaacttgtaactcctttgattaatggaaacagtggaagcagggtcgtcat |
10889601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 11 - 376
Target Start/End: Original strand, 8861212 - 8861576
Alignment:
| Q |
11 |
cagagagcagcactaggaataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatga |
110 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8861212 |
cagagagcagcactaggaataacaatatcggtgttgttgcaattttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaatgatga |
8861311 |
T |
|
| Q |
111 |
aaaagttcaagagcactttgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttca |
210 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8861312 |
aaaagttcaagagcactttgatctcaaagcatgggcttgtgtatcagaggattttgatatttcaactgtaactaaaactcttcttgaatctgtcacttca |
8861411 |
T |
|
| Q |
211 |
agagcttgggaaaacaataatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatg |
310 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8861412 |
agagcttgggaaaacaataatcttgattttcttcgagttgaactaaagaaaacattgagagacaaaagatttttgtttgtgttggatgacctatggaatg |
8861511 |
T |
|
| Q |
311 |
acaattataatgattgggattgaacttgtaactcctttgattaatggaaacagtggaagcagggtc |
376 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8861512 |
acaattataatgagtggga-tgaacttgtaactcctttgattaatggaaacagtggaagcagggtc |
8861576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 11160160 - 11159796
Alignment:
| Q |
11 |
cagagagcagcactaggaataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatga |
110 |
Q |
| |
|
||||||| |||||| | ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
11160160 |
cagagagtagcactggcaataacaatataggcgttgttgcaattttaggtatgggaggtgtcggtaaaacgacacttgcacaacttgtttacaataatga |
11160061 |
T |
|
| Q |
111 |
aaaagttcaagagcactttgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttca |
210 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
11160060 |
aaaagttcaagatcattttgatttcaaagcatgggcttgtgtatctgaggattttgatattttatctgtaactaaaactcttcttgaatctgtcacttca |
11159961 |
T |
|
| Q |
211 |
agagcttgggaaaacaataatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatg |
310 |
Q |
| |
|
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
11159960 |
agagcttgggaaaccaataatcttgattttcttcgagttgaactaaagaaaactttgagcgacaaaagatttttgtttgtgttggatgacctttggaatg |
11159861 |
T |
|
| Q |
311 |
acaattataatgattgggattgaacttgtaactcctttgattaatggaaacagtggaagcagggtc |
376 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11159860 |
acaattataatgattggga-tgaacttgtaactcctttgattaatggaaacagtggaagcagggtc |
11159796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 14 - 376
Target Start/End: Complemental strand, 11131166 - 11130805
Alignment:
| Q |
14 |
agagcagcactaggaataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaa |
113 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||||||| ||| ||||||||||||||| |
|
|
| T |
11131166 |
agagcagcactagcaataacaatatcggtgttgttgcaattttaggtatgggaggtgtcggaaaaacaacccttgcacaaattgcttacaatgatgaaaa |
11131067 |
T |
|
| Q |
114 |
agttcaagagcactttgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaaga |
213 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
11131066 |
agttcaagaacactttgatctcaaagcatgggcttgtgtatcggaggattttgatattttaagagtaactaaaactctccttgaatctgtcacttcaagg |
11130967 |
T |
|
| Q |
214 |
gcttgggaaaacaataatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgaca |
313 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11130966 |
gcttgggaaaacaataatcttgattttcttcgagttgaactgaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgaca |
11130867 |
T |
|
| Q |
314 |
attataatgattgggattgaacttgtaactcctttgattaatggaaacagtggaagcagggtc |
376 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
11130866 |
attataatgattggga-tgaacttgtaactcctttgattaatggaaacaatggaagcagggtc |
11130805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 14 - 376
Target Start/End: Complemental strand, 11148994 - 11148633
Alignment:
| Q |
14 |
agagcagcactaggaataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaa |
113 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||||||| ||| ||||||||||||||| |
|
|
| T |
11148994 |
agagcagcactagcaataacaatatcggtgttgttgcaattttaggtatgggaggtgtcggaaaaacaacccttgcacaaattgcttacaatgatgaaaa |
11148895 |
T |
|
| Q |
114 |
agttcaagagcactttgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaaga |
213 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |
|
|
| T |
11148894 |
agttcaagaacactttgatctcaaagcatgggcttgtgtatcggaggattttgatattttaagagtaactaaaactctccttgaatctgtcacttcaagg |
11148795 |
T |
|
| Q |
214 |
gcttgggaaaacaataatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgaca |
313 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
11148794 |
gcttgggaaaacaataatcttgattttcttcgagttgaactgaagaaaactttgagagccaaaagatttttgtttgtgttggatgacttatggaatgaca |
11148695 |
T |
|
| Q |
314 |
attataatgattgggattgaacttgtaactcctttgattaatggaaacagtggaagcagggtc |
376 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
11148694 |
attataatgattggga-tgaacttgtaacacctttgattaatggaaacagtggaagcagggtc |
11148633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 40 - 330
Target Start/End: Original strand, 13332859 - 13333149
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||| ||||| || ||||| |||||| |||| |||||| || |||||||||| || |||||| | |||| |
|
|
| T |
13332859 |
ggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
13332958 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatctagattt |
239 |
Q |
| |
|
|||| ||||||||| |||||||| |||||| | | ||||||||||| ||| |||||||||||||||||||| | | |||||||||||||| ||||| |
|
|
| T |
13332959 |
tctgggtttgtgtatcggaggatttcgatattctgagagtaactaaaaccattcatgaatctgtcacttcaagaggtggtgaaaacaataatcttgattt |
13333058 |
T |
|
| Q |
240 |
tcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgggat |
330 |
Q |
| |
|
||||||||||||| | || |||| ||||| || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
13333059 |
tcttcgagttgaattgaataaaaacttgagggataaaagatttttgttagtgttggatgacctgtggaatgacaattataatgattgggat |
13333149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 29 - 328
Target Start/End: Complemental strand, 10375970 - 10375671
Alignment:
| Q |
29 |
ataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactt |
128 |
Q |
| |
|
|||| ||||| ||||||||||||||||| || ||||||||| | || ||||| || |||||||||||||||||||||||||||||||||||| | || || |
|
|
| T |
10375970 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcacaacttgtttacaatgatgaaaaagttcaacaacattt |
10375871 |
T |
|
| Q |
129 |
tgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaat |
228 |
Q |
| |
|
|||||| || |||||||||||||| |||||||||||||||||||| | ||||| || |||| |||||||| |||||||||||| | ||||| | |||| |
|
|
| T |
10375870 |
tgatttgaaggcatgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttcaagaacatgggatagcaat |
10375771 |
T |
|
| Q |
229 |
aatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattggg |
328 |
Q |
| |
|
||||| ||| | |||||||||| ||||||||| | || || |||||||||||||||||||||||||| | ||||||||||||||| ||||||||| |
|
|
| T |
10375770 |
aatcttgatgtccttcgagttgcgttaaagaaaaaatcaagggagaaaagatttttgtttgtgttggatgatttgtggaatgacaattattatgattggg |
10375671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 29 - 360
Target Start/End: Original strand, 10126872 - 10127202
Alignment:
| Q |
29 |
ataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactt |
128 |
Q |
| |
|
|||| ||||| ||||||||||||||||| || ||||||||| | || ||||| || ||||| |||||||||||||||||| || |||||||| | || || |
|
|
| T |
10126872 |
ataataatataggtgttgttgcaattttgggcatgggaggtttgggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattt |
10126971 |
T |
|
| Q |
129 |
tgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaat |
228 |
Q |
| |
|
|||||| || ||||||| |||||| |||||||||||||||||| | | ||||| || |||| ||||||||||||||||| | | ||||||| | |||| |
|
|
| T |
10126972 |
tgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttccacaacttgggatagcaat |
10127071 |
T |
|
| Q |
229 |
aatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattggg |
328 |
Q |
| |
|
||||| ||| | |||||||||| ||||||||| | ||| || ||||||||||||||||||||||| || |||||||||||||||| ||||||||||| |
|
|
| T |
10127072 |
aatcttgatgtccttcgagttgcgttaaagaaaatctcgagggaaaaaagatttttgtttgtgttggacgatctatggaatgacaattgtaatgattggg |
10127171 |
T |
|
| Q |
329 |
attgaacttgtaactcctttgattaatggaaa |
360 |
Q |
| |
|
| ||| || |||| ||| || ||||||||||| |
|
|
| T |
10127172 |
a-tgagctagtaagtcccttcattaatggaaa |
10127202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 40 - 328
Target Start/End: Complemental strand, 10434158 - 10433870
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
|||||||||||||||||||| ||||||||| | || ||||| || ||||| |||||||||||||||||| || |||||||| | || |||||||| || | |
|
|
| T |
10434158 |
ggtgttgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccattttgatttgaagg |
10434059 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatctagattt |
239 |
Q |
| |
|
| ||||||||||| ||| |||||||||||||||| | ||||| || |||| |||||||| |||||||| ||| ||||||| | ||||||||| ||| | |
|
|
| T |
10434058 |
cctgggcttgtgtgtctcaggattttgatattttgaaagtaaccaagtctctccttgaatcggtcacttccagaacttgggatagcaataatcttgatgt |
10433959 |
T |
|
| Q |
240 |
tcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattggg |
328 |
Q |
| |
|
||||| ||||| ||||||||| | ||| || ||||||||||||||||||||||| || || ||||||||||||||||||||||||| |
|
|
| T |
10433958 |
ccttcgtgttgagttaaagaaaaactcgagggagaaaagatttttgtttgtgttggacgatctgtggaatgacaattataatgattggg |
10433870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 34 - 328
Target Start/End: Complemental strand, 10363918 - 10363624
Alignment:
| Q |
34 |
aatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatt |
133 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||| | || ||||| || ||||| |||||||||||||||||| || |||||||| | || ||||||| |
|
|
| T |
10363918 |
aatataggtgttgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattttgatt |
10363819 |
T |
|
| Q |
134 |
tcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatct |
233 |
Q |
| |
|
| || ||||||| |||||| |||||||||||||||||| | | ||||| || |||| |||||||||| |||||| | | ||| ||||| ||||||||| |
|
|
| T |
10363818 |
tgaaggcatgggtttgtgtctctgaggattttgatattatgagagtaacaaagtctctccttgaatctgccacttccataacttcggaaagcaataatct |
10363719 |
T |
|
| Q |
234 |
agattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattggg |
328 |
Q |
| |
|
||| | ||||||||||| ||||||||| | ||| || ||||||| ||||||||||||||| || || ||||||||||||||||||||||||| |
|
|
| T |
10363718 |
tgatgtccttcgagttgagttaaagaaaatctcgagggagaaaagatatttgtttgtgttggacgatctgtggaatgacaattataatgattggg |
10363624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 29 - 328
Target Start/End: Original strand, 11769178 - 11769477
Alignment:
| Q |
29 |
ataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactt |
128 |
Q |
| |
|
|||| ||||| ||||||||||||||||| || ||||||||| | || ||||| || ||||| |||||||| ||||||||| || |||||||| | | || |
|
|
| T |
11769178 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtctacaatgataaagaagttcaacaatattt |
11769277 |
T |
|
| Q |
129 |
tgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaat |
228 |
Q |
| |
|
|||||| || ||||||||||| || |||||||||||||||||| | | ||||| | |||| |||||||| |||||||||||| ||||||| | |||| |
|
|
| T |
11769278 |
tgatttgaaggcatgggcttgcgtgtctgaggattttgatattatgagagtaaccaggtctctccttgaatcggtcacttcaagaacttgggatagcaat |
11769377 |
T |
|
| Q |
229 |
aatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattggg |
328 |
Q |
| |
|
||||| ||| | ||||||||||| ||||||||| ||||| || |||||||||||||||||||| ||||| | ||||||||||||||||||||||||| |
|
|
| T |
11769378 |
aatcttgatatccttcgagttgagttaaagaaaaacttgagggagaaaagatttttgtttgtgttagatgatatgtggaatgacaattataatgattggg |
11769477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 34 - 360
Target Start/End: Original strand, 10088739 - 10089064
Alignment:
| Q |
34 |
aatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatt |
133 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||| | || ||||| || ||||| |||||||||||||||||| || |||||||| | || ||||||| |
|
|
| T |
10088739 |
aatataggtgttgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccattttgatt |
10088838 |
T |
|
| Q |
134 |
tcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatct |
233 |
Q |
| |
|
| || ||||||| |||||| |||||||||||||||||| | | ||||| || |||| ||||||||||||||||| | | ||| ||| | |||| |||| |
|
|
| T |
10088839 |
tgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttcgacaacttcggatagcaatgatct |
10088938 |
T |
|
| Q |
234 |
agattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgggattga |
333 |
Q |
| |
|
| | | |||| |||||| ||||||||| | ||| || |||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| |
|
|
| T |
10088939 |
tggtgtccttcaagttgagttaaagaaaaactcgagggagaaaagatttttgtttgtgttggatgatctgtggaatgacaattataatgatt-ggattgc |
10089037 |
T |
|
| Q |
334 |
acttgtaactcctttgattaatggaaa |
360 |
Q |
| |
|
||| |||| ||| || ||| ||||||| |
|
|
| T |
10089038 |
actagtaagtcccttcattgatggaaa |
10089064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 34 - 360
Target Start/End: Original strand, 10195622 - 10195947
Alignment:
| Q |
34 |
aatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatt |
133 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||| | || ||||| || ||||| |||||||||||||||||| || |||||||| | || ||||||| |
|
|
| T |
10195622 |
aatataggtgttgttgcaattttaggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaccattttgatt |
10195721 |
T |
|
| Q |
134 |
tcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatct |
233 |
Q |
| |
|
| || ||||||| |||||| |||||||||||||||||| | | ||||| || |||| ||||||||||||||||| | | ||| ||| | |||| |||| |
|
|
| T |
10195722 |
tgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttcgacaacttcggatagcaatgatct |
10195821 |
T |
|
| Q |
234 |
agattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgggattga |
333 |
Q |
| |
|
| | | |||| |||||| ||||||||| | ||| || |||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| |
|
|
| T |
10195822 |
tggtgtccttcaagttgagttaaagaaaaactcgagggagaaaagatttttgtttgtgttggatgatctgtggaatgacaattataatgatt-ggattgc |
10195920 |
T |
|
| Q |
334 |
acttgtaactcctttgattaatggaaa |
360 |
Q |
| |
|
||| |||| ||| || ||| ||||||| |
|
|
| T |
10195921 |
actagtaagtcccttcattgatggaaa |
10195947 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 29 - 327
Target Start/End: Original strand, 10663470 - 10663768
Alignment:
| Q |
29 |
ataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactt |
128 |
Q |
| |
|
|||| ||||| ||||||||||||||||| || ||||||||| | || ||||| || ||||| |||||||||||||||||| || |||||||| | || || |
|
|
| T |
10663470 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattt |
10663569 |
T |
|
| Q |
129 |
tgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaat |
228 |
Q |
| |
|
|||||| || ||||||| |||||| |||||||||||||||||| | | ||||| || |||| ||||||||||||||||| | | ||||||| | ||| |
|
|
| T |
10663570 |
tgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttccacaacttgggatagcaaa |
10663669 |
T |
|
| Q |
229 |
aatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgg |
327 |
Q |
| |
|
|||| ||| | ||||||||||| ||||||||| | ||| || |||||||||||||||||||| ||||| || |||||||||||||||||||||||| |
|
|
| T |
10663670 |
gatcttgatgtccttcgagttgagttaaagaaaatctcgagggagaaaagatttttgtttgtgttcgatgatctgtggaatgacaattataatgattgg |
10663768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 29 - 328
Target Start/End: Original strand, 9838805 - 9839104
Alignment:
| Q |
29 |
ataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactt |
128 |
Q |
| |
|
|||||||||| ||||||||||||||||| || ||||||||| | || ||||| || ||||| ||||||||||||||||||||| |||||||| | || || |
|
|
| T |
9838805 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
9838904 |
T |
|
| Q |
129 |
tgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaat |
228 |
Q |
| |
|
|||| | | || ||||||||||| |||||||||||||||||||| | ||||| || |||| |||||||| |||||||| | | | ||||| | |||| |
|
|
| T |
9838905 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaat |
9839004 |
T |
|
| Q |
229 |
aatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattggg |
328 |
Q |
| |
|
||||| ||| | |||||||||| ||||||||| | || || |||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
9839005 |
aatcttgatgtccttcgagttgcgttaaagaaaaactcaagggagaaaagatttttgtttgtgttggatgatttgtggaatgacaattataatgattggg |
9839104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 29 - 328
Target Start/End: Original strand, 9849683 - 9849982
Alignment:
| Q |
29 |
ataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactt |
128 |
Q |
| |
|
|||||||||| ||||||||||||||||| || ||||||||| | || ||||| || ||||| ||||||||||||||||||||| |||||||| | || || |
|
|
| T |
9849683 |
ataacaatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgatgaagaagttcaacaacattt |
9849782 |
T |
|
| Q |
129 |
tgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaat |
228 |
Q |
| |
|
|||| | | || ||||||||||| |||||||||||||||||||| | ||||| || |||| |||||||| |||||||| | | | ||||| | |||| |
|
|
| T |
9849783 |
tgatatgagggcgtgggcttgtgtgtctgaggattttgatattttgagagtaaccaagtctctccttgaatcggtcacttccataacatgggatagcaat |
9849882 |
T |
|
| Q |
229 |
aatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattggg |
328 |
Q |
| |
|
||||| ||| | |||||||||| ||||||||| | || || |||||||||||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
9849883 |
aatcttgatgtccttcgagttgcgttaaagaaaaactcaagggagaaaagatttttgtttgtgttggatgatttgtggaatgacaattataatgattggg |
9849982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 29 - 328
Target Start/End: Original strand, 10031947 - 10032246
Alignment:
| Q |
29 |
ataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactt |
128 |
Q |
| |
|
|||| ||||| ||||||||||||||||| || ||||||||| | || ||||| || ||||| |||||||||||||||||| || |||||||| | || || |
|
|
| T |
10031947 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattt |
10032046 |
T |
|
| Q |
129 |
tgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaat |
228 |
Q |
| |
|
|||||| || || ||||||||||| |||||||||||||||||| | | ||||| || |||| ||||||||||||||||| | | ||| ||| | ||| |
|
|
| T |
10032047 |
tgatttgaaggcctgggcttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttccacaacttcggatagcaaa |
10032146 |
T |
|
| Q |
229 |
aatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattggg |
328 |
Q |
| |
|
|||| ||| | ||||||||||| ||||||||| | ||| || ||||||||||||||||| |||||||| || ||||||||||||||||||||||||| |
|
|
| T |
10032147 |
gatcttgatgtccttcgagttgagttaaagaaaatctcgagggagaaaagatttttgtttgttttggatgatctgtggaatgacaattataatgattggg |
10032246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 40 - 330
Target Start/End: Original strand, 13170986 - 13171276
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||| ||||| || ||||| |||||| |||| |||||| || |||||||||| || |||||| | |||| |
|
|
| T |
13170986 |
ggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
13171085 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatctagattt |
239 |
Q |
| |
|
|||| ||||||||| |||||||| |||||| | | ||||||||||| ||| |||||||||||||||||||| | | |||||||||||||| ||||| |
|
|
| T |
13171086 |
tctgggtttgtgtatcggaggatttcgatattctgagagtaactaaaaccattcatgaatctgtcacttcaagaggtggtgaaaacaataatcttgattt |
13171185 |
T |
|
| Q |
240 |
tcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgggat |
330 |
Q |
| |
|
||||||||||||| | || ||| ||||| || |||||||||||||| ||| |||| || || |||||||| | |||||||||||||||| |
|
|
| T |
13171186 |
tcttcgagttgaattgaatcaaaacttgagggataaaagatttttgttagtgctggacgatctgtggaatgatagttataatgattgggat |
13171276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 40 - 360
Target Start/End: Original strand, 10077224 - 10077543
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
||||||||||||||||| || ||||||||| | || ||||| || ||||| |||||||||||||||||| | ||||||| | | || |||||||| | | |
|
|
| T |
10077224 |
ggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgattataaagttcgataccattttgatttgcagg |
10077323 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatctagattt |
239 |
Q |
| |
|
||||||||||||| |||||||||||||||||| | | ||||| || |||| |||||||| ||||||| ||| ||||||| |||||| |||| ||| | |
|
|
| T |
10077324 |
catgggcttgtgtgtctgaggattttgatattatgagagtaaccaagtctctccttgaatcgatcacttctagaacttgggataacaatgatcttgatgt |
10077423 |
T |
|
| Q |
240 |
tcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgggattgaacttgt |
339 |
Q |
| |
|
||||||||||| |||| |||| | ||| || |||||||||||||||||||| ||||| | |||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
10077424 |
ccttcgagttgagttaaaaaaaaactcgagggataaaagatttttgtttgtgttagatgatatgtggaatgacaattatagtgattggga-tgaacttgt |
10077522 |
T |
|
| Q |
340 |
aactcctttgattaatggaaa |
360 |
Q |
| |
|
|| ||| || ||| ||||||| |
|
|
| T |
10077523 |
aagtcccttcattgatggaaa |
10077543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 360
Target Start/End: Original strand, 10580545 - 10580875
Alignment:
| Q |
29 |
ataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactt |
128 |
Q |
| |
|
|||| ||||| ||||||||||||||||| || ||||||||| | || ||||| || ||||| |||||||||||||||||| || |||||||| | || || |
|
|
| T |
10580545 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttgtttacaatgataaagaagttcaacaacattt |
10580644 |
T |
|
| Q |
129 |
tgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaat |
228 |
Q |
| |
|
||| | || || |||| |||||| |||||||||||||||||| | | ||||| || |||| ||||||||||||||||| | | ||| ||||| |||| |
|
|
| T |
10580645 |
tgacatgaaggcgtgggtttgtgtgtctgaggattttgatattatgagagtaacaaagtctctccttgaatctgtcacttccacaacttcggaaagcaat |
10580744 |
T |
|
| Q |
229 |
aatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattggg |
328 |
Q |
| |
|
||||| ||| | ||||| ||||| ||||||||| | || || |||||||||||||||||||||||||| || ||||||||||||| ||||||||||| |
|
|
| T |
10580745 |
aatcttgatgtccttcgtgttgagttaaagaaaatctcaagggagaaaagatttttgtttgtgttggatgatctgtggaatgacaattgtaatgattggg |
10580844 |
T |
|
| Q |
329 |
attgaacttgtaactcctttgattaatggaaa |
360 |
Q |
| |
|
| ||| || |||| ||| || ||||||||||| |
|
|
| T |
10580845 |
a-tgagctagtaagtcccttcattaatggaaa |
10580875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 34 - 328
Target Start/End: Original strand, 10260647 - 10260941
Alignment:
| Q |
34 |
aatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatt |
133 |
Q |
| |
|
||||| ||||||||||||||||| || ||||||||| | || ||||| || ||||| |||||||||||||||||| || |||||||| | || ||||| |
|
|
| T |
10260647 |
aatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtttacaatgataaagaagttcaacaacattttgaca |
10260746 |
T |
|
| Q |
134 |
tcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatct |
233 |
Q |
| |
|
| || || ||||||||||| |||||||||||||||||| | | ||||| || |||| |||||||| |||||||| ||| |||||| | ||||||||| |
|
|
| T |
10260747 |
tgaaggcgtgggcttgtgtgtctgaggattttgatattatgagagtaaccaagtctctccttgaatcagtcacttctagaaattgggatatcaataatct |
10260846 |
T |
|
| Q |
234 |
agattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattggg |
328 |
Q |
| |
|
|| | ||||||||||| ||||||||| | ||| || ||||||||||||||||||||||| || || ||||||||||||||||||||||||| |
|
|
| T |
10260847 |
tgacatccttcgagttgagttaaagaaaatctcgagggagaaaagatttttgtttgtgttggacgatctgtggaatgacaattataatgattggg |
10260941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 40 - 330
Target Start/End: Original strand, 13289620 - 13289910
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
||||| || |||||||| |||||||| |||||||| ||||| || ||||| |||||| |||| |||||| || |||||||||| || |||||| | |||| |
|
|
| T |
13289620 |
ggtgtggtcgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
13289719 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatctagattt |
239 |
Q |
| |
|
|||| ||||||||| |||||||| |||||||| | ||||||||||| ||| |||||||||||||||||||| | | |||| ||||||||| |||| |
|
|
| T |
13289720 |
tctgggtttgtgtatcggaggatttcgatattttgagagtaactaaaaccattcatgaatctgtcacttcaagaggtggtgaaagcaataatcttgattc |
13289819 |
T |
|
| Q |
240 |
tcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgggat |
330 |
Q |
| |
|
||||||||||||||| || ||| ||||| || |||||||||||||| ||| |||| || || |||||||| | |||||||||||||||| |
|
|
| T |
13289820 |
tcttcgagttgaactgaatcaaaacttgagggataaaagatttttgttggtgctggacgatctgtggaatgatagttataatgattgggat |
13289910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 40 - 330
Target Start/End: Original strand, 13344044 - 13344334
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||| ||||| || ||||| |||||| |||| |||||| || |||||||||| || |||||| | |||| |
|
|
| T |
13344044 |
ggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
13344143 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatctagattt |
239 |
Q |
| |
|
|||| ||||||||| |||||||| |||||| | | || |||||||| ||| |||||||||||||||||||| | | |||||||||||||| ||||| |
|
|
| T |
13344144 |
tctgggtttgtgtatcggaggatttcgatattctgagagtcactaaaaccattcatgaatctgtcacttcaagaggtggtgaaaacaataatcttgattt |
13344243 |
T |
|
| Q |
240 |
tcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgggat |
330 |
Q |
| |
|
||||||||||||| | || ||| ||||| || |||||||||||||| ||| |||| || || |||||||| | |||||||||||||||| |
|
|
| T |
13344244 |
tcttcgagttgaattgaatcaaaacttgagggataaaagatttttgttagtgctggacgatctgtggaatgatagttataatgattgggat |
13344334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 40 - 330
Target Start/End: Original strand, 13160935 - 13161225
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||| ||||| || ||||| |||||| |||| |||||| || |||||||||| || |||||| | |||| |
|
|
| T |
13160935 |
ggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
13161034 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatctagattt |
239 |
Q |
| |
|
|||| ||||||||| |||||||| |||||| | | ||||||||||| ||| |||||||||||| ||||||||| | |||| ||||||||| |||| |
|
|
| T |
13161035 |
tctgggtttgtgtatcggaggatttcgatattctgagagtaactaaaaccattcatgaatctgtcacctcaagagctggcgaaagcaataatcttgattc |
13161134 |
T |
|
| Q |
240 |
tcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgggat |
330 |
Q |
| |
|
|||||||||||| | || |||| ||||| || |||||||||||||| ||| |||| || || |||||||| | |||||||||||||||| |
|
|
| T |
13161135 |
tcttcgagttgagttgaataaaaacttgagggataaaagatttttgttagtgctggacgatctgtggaatgatagttataatgattgggat |
13161225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 40 - 330
Target Start/End: Original strand, 10184197 - 10184487
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
||||||||||||||||| || ||||||||| | || ||||| || ||||| |||||||||||||||||| || |||||||| | || |||||| | | | |
|
|
| T |
10184197 |
ggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgctcaacttgtttacaatgataaagaagttcaacaacattttgatatgaggg |
10184296 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatctagattt |
239 |
Q |
| |
|
| ||||||||||| || ||||||||||||||| | | ||||| || |||| ||||||||||||||||| | | ||||||| | ||||||||| ||| | |
|
|
| T |
10184297 |
cgtgggcttgtgtgtccgaggattttgatattatgagagtaaccaagtctctccttgaatctgtcacttccacaacttgggatagcaataatcttgatgt |
10184396 |
T |
|
| Q |
240 |
tcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgggat |
330 |
Q |
| |
|
||||||||||| |||||||| || || || ||||||||||||||||| |||||||| || |||||||||| |||| ||||||||||| |
|
|
| T |
10184397 |
ccttcgagttgagttaaagaaacattcaagggagaaaagatttttgtttgtattggatgatctgtggaatgacagttatgatgattgggat |
10184487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 184 - 372
Target Start/End: Complemental strand, 11153743 - 11153557
Alignment:
| Q |
184 |
aaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttt |
283 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| | |||| || ||||| ||||||||||||||||| ||||||||| | |||||||| ||||||||| |
|
|
| T |
11153743 |
aaaactctccttgaatctgtcacttcaagagcatatgaaagtaacaatcttgattttcttcgagttgagttaaagaaaattctgagagac-aaagatttt |
11153645 |
T |
|
| Q |
284 |
tgtttgtgttggatgacctatggaatgacaattataatgattgggattgaacttgtaactcctttgattaatggaaacagtggaagcag |
372 |
Q |
| |
|
| |||||||||||||| |||||||||| |||||||| |||| || ||||||||||||||| |||||| ||||||| ||||||||||| |
|
|
| T |
11153644 |
ttgttgtgttggatgacttatggaatgataattataacgattcaga-tgaacttgtaactccattgatttatggaaaaagtggaagcag |
11153557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 10517419 - 10517547
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
||||||| ||||||| | ||||||||||| || ||||||||||| |||||||| ||||||||||||||| ||||||| || | || ||||||||||||| |
|
|
| T |
10517419 |
ggtgttgctgcaattgtgggtatgggaggcgtcggtaaaacgacccttgcacagtttgtttacaatgatgcaaaagttgaacaacattttgatttcaaag |
10517518 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattttgat |
168 |
Q |
| |
|
| |||| |||||||||||||||||||||| |
|
|
| T |
10517519 |
cctgggtttgtgtatctgaggattttgat |
10517547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 10527292 - 10527416
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
|||||||||||||| || |||||||||||||| |||||||| || ||||||||||||||||||||||||||||| ||| || | || |||||| |||| | |
|
|
| T |
10527292 |
ggtgttgttgcaatcttgggtatgggaggtgtcggtaaaacaacccttgcacaacttgtttacaatgatgaaaaggttgaacaccattttgatctcaagg |
10527391 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattt |
164 |
Q |
| |
|
| |||| || |||||| |||||||| |
|
|
| T |
10527392 |
cctgggtttatgtatcagaggattt |
10527416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 11782117 - 11781993
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
|||||||| |||||||| ||||||||||| || ||||||||||| |||||||| |||||||||||||||| |||||| || | || ||||||||||||| |
|
|
| T |
11782117 |
ggtgttgtcgcaattttgggtatgggaggcgtcggtaaaacgacccttgcacagcttgtttacaatgatgtgaaagttgaacaacattttgatttcaaag |
11782018 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattt |
164 |
Q |
| |
|
|||| ||||||||| |||||||| |
|
|
| T |
11782017 |
tctgggtttgtgtatcggaggattt |
11781993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 330
Target Start/End: Original strand, 10527490 - 10527603
Alignment:
| Q |
217 |
tgggaaaacaataatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaatt |
316 |
Q |
| |
|
||||||| ||||||||| ||| | ||||||||| | ||||||||| | || || || ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10527490 |
tgggaaagcaataatcttgatatccttcgagttcagttaaagaaaatctcaagggagaagagatttttgtttgtgttggatgatctatggaatgacaatt |
10527589 |
T |
|
| Q |
317 |
ataatgattgggat |
330 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
10527590 |
acaatgattgggat |
10527603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 10500511 - 10500635
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
||||||||||||||||| ||||||||||| || |||||||| |||||||| |||||||||||||| || || ||| || |||| || |||||| | || | |
|
|
| T |
10500511 |
ggtgttgttgcaattttgggtatgggaggcgtcggtaaaacaacacttgctcaacttgtttacaacgacgataaaattgaagaacattttgatctgaagg |
10500610 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattt |
164 |
Q |
| |
|
||||| ||||||| | |||||||| |
|
|
| T |
10500611 |
catggatttgtgtaccggaggattt |
10500635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 29 - 360
Target Start/End: Original strand, 26906841 - 26907171
Alignment:
| Q |
29 |
ataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactt |
128 |
Q |
| |
|
|||| ||||| ||||||||||||||||| || ||||||||| | || ||||| || ||||| |||||| ||||||||||| || |||||||| ||| || |
|
|
| T |
26906841 |
ataataatataggtgttgttgcaattttgggcatgggaggtttaggaaaaactacccttgcccaacttctttacaatgataaagaagttcaacggcattt |
26906940 |
T |
|
| Q |
129 |
tgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaat |
228 |
Q |
| |
|
|||||| || ||||||| |||||| |||||||||||||||||| | | ||||| ||| |||| |||||||| |||||||| ||| ||||||| | |||| |
|
|
| T |
26906941 |
tgatttgaaggcatgggtttgtgtgtctgaggattttgatattatgagagtaaccaaatctctccttgaatcggtcacttccagaacttgggataccaat |
26907040 |
T |
|
| Q |
229 |
aatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattggg |
328 |
Q |
| |
|
||||| ||| | ||||||||||| ||| ||||| | || || ||||||||||||||||||||||||||||| ||||| |||||||||| |||||||| |
|
|
| T |
26907041 |
aatcttgatgtccttcgagttgagttaaggaaaaactcaagggagaaaagatttttgtttgtgttggatgacctgtggaacgacaattatagtgattggg |
26907140 |
T |
|
| Q |
329 |
attgaacttgtaactcctttgattaatggaaa |
360 |
Q |
| |
|
| |||||||||| ||| || ||| ||||||| |
|
|
| T |
26907141 |
a-agaacttgtaagtcccttcattcatggaaa |
26907171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 40 - 330
Target Start/End: Complemental strand, 136002 - 135712
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||| ||||| || ||||| |||||| |||| |||||| || |||||||||| || |||||| | |||| |
|
|
| T |
136002 |
ggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
135903 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatctagattt |
239 |
Q |
| |
|
|||| ||||||||| |||||||| |||||| | | ||||||||||| ||| |||||||||||||||||||| | | |||||||||||||| ||||| |
|
|
| T |
135902 |
tctgggtttgtgtatcggaggatttcgatattctgagagtaactaaaaccattcatgaatctgtcacttcaagaggtggtgaaaacaataatcttgattt |
135803 |
T |
|
| Q |
240 |
tcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgggat |
330 |
Q |
| |
|
||||||||||||| | || ||| ||||| || |||||||||||||| ||| |||| || || |||||||| | |||||||||||||||| |
|
|
| T |
135802 |
tcttcgagttgaattgaatcaaaacttgagggataaaagatttttgttagtgctggacgatctgtggaatgatagttataatgattgggat |
135712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 40 - 330
Target Start/End: Complemental strand, 146053 - 145763
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||| ||||| || ||||| |||||| |||| |||||| || |||||||||| || |||||| | |||| |
|
|
| T |
146053 |
ggtgtggttgcaattttgggtatgggcggtgttggcaaaaccactcttgcccaacttctttataatgataaagaagttcaagaccattttgatctgaaag |
145954 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatctagattt |
239 |
Q |
| |
|
|||| ||||||||| |||||||| |||||| | | ||||||||||| ||| |||||||||||||||||||| | | |||||||||||||| ||||| |
|
|
| T |
145953 |
tctgggtttgtgtatcggaggatttcgatattctgagagtaactaaaaccattcatgaatctgtcacttcaagaggtggtgaaaacaataatcttgattt |
145854 |
T |
|
| Q |
240 |
tcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgggat |
330 |
Q |
| |
|
||||||||||||| | || ||| ||||| || |||||||||||||| ||| |||| || || |||||||| | |||||||||||||||| |
|
|
| T |
145853 |
tcttcgagttgaattgaatcaaaacttgagggataaaagatttttgttagtgctggacgatctgtggaatgatagttataatgattgggat |
145763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 11484972 - 11485096
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
||||||||||||||||| | ||||||||| || ||||||||||| |||||||||||||||||||| |||||||||||| || |||| |||||| |||||| |
|
|
| T |
11484972 |
ggtgttgttgcaattttggttatgggaggcgtcggtaaaacgacccttgcacaacttgtttacaacgatgaaaaagttgaacagcattttgatctcaaag |
11485071 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattt |
164 |
Q |
| |
|
|||||| ||||||||| |||||||| |
|
|
| T |
11485072 |
catgggtttgtgtatcggaggattt |
11485096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 44957823 - 44957699
Alignment:
| Q |
40 |
ggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaag |
139 |
Q |
| |
|
||||||||||| | ||||||||||||||||| ||||||||||| || ||||||||||||||||||||| ||||||| || | || || ||| |||||| |
|
|
| T |
44957823 |
ggtgttgttgccaccttaggtatgggaggtgtcggtaaaacgactctcgcacaacttgtttacaatgatataaaagttgaacaacatttcgatctcaaag |
44957724 |
T |
|
| Q |
140 |
catgggcttgtgtatctgaggattt |
164 |
Q |
| |
|
||||| |||||||| |||||||| |
|
|
| T |
44957723 |
catggatatgtgtatcagaggattt |
44957699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 319
Target Start/End: Complemental strand, 44957625 - 44957523
Alignment:
| Q |
217 |
tgggaaaacaataatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaatt |
316 |
Q |
| |
|
||||||| | ||||||| ||| | |||| ||||||| ||| |||| ||||| || | ||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
44957625 |
tgggaaagcgataatcttgatatccttcaagttgaattaatgaaacatttgatggatagaagatttttgtttgtgttggacgacatatggaatgacaatt |
44957526 |
T |
|
| Q |
317 |
ata |
319 |
Q |
| |
|
||| |
|
|
| T |
44957525 |
ata |
44957523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 330
Target Start/End: Original strand, 11485152 - 11485283
Alignment:
| Q |
199 |
tctgtcacttcaagagcttgggaaaacaataatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatg |
298 |
Q |
| |
|
||||||| ||||| || ||||||| ||||||||| ||| | |||| ||||||| ||| ||| ||||| || | |||| |||||||||||||||| | |
|
|
| T |
11485152 |
tctgtcaattcaaaagtctgggaaagcaataatcttgatatccttcaagttgaattaatgaagcatttgaaggatagaagaattttgtttgtgttggacg |
11485251 |
T |
|
| Q |
299 |
acctatggaatgacaattataatgattgggat |
330 |
Q |
| |
|
|| ||||||| ||||||||| |||||||||| |
|
|
| T |
11485252 |
acatatggaacgacaattatcttgattgggat |
11485283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 28 - 168
Target Start/End: Complemental strand, 17853070 - 17852930
Alignment:
| Q |
28 |
aataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcact |
127 |
Q |
| |
|
||||||||| | |||||||||||||| || || ||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||| || | || | |
|
|
| T |
17853070 |
aataacaatttaggtgttgttgcaatattggggatgggaggtgtcggtaaaacgacccttgcacagcttgtttacaatgatgaaaaggttgaacatcatt |
17852971 |
T |
|
| Q |
128 |
ttgatttcaaagcatgggcttgtgtatctgaggattttgat |
168 |
Q |
| |
|
||||| ||||||| |||| ||||||||| || ||||||||| |
|
|
| T |
17852970 |
ttgatctcaaagcctgggtttgtgtatcagaagattttgat |
17852930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 317
Target Start/End: Complemental strand, 17852801 - 17852760
Alignment:
| Q |
276 |
aagatttttgtttgtgttggatgacctatggaatgacaatta |
317 |
Q |
| |
|
||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
17852801 |
aagatttttgtttgtgttggacgacttatggaatgacaatta |
17852760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 42 - 327
Target Start/End: Complemental strand, 31679845 - 31679560
Alignment:
| Q |
42 |
tgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaagca |
141 |
Q |
| |
|
||||||| ||||||| || ||||||||||| |||||||| | || || |||||| ||||||||||| || | |||||||| | |||||| | ||||| |
|
|
| T |
31679845 |
tgttgtttcaattttcggcatgggaggtgtcggtaaaacagccctagctcaacttctttacaatgataaagatgttcaagaacgttttgatgtaaaagct |
31679746 |
T |
|
| Q |
142 |
tgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaataatctagattttc |
241 |
Q |
| |
|
|||| |||| | || || || |||||| |||| | ||||| | |||| | ||||||||| ||||||||| | | ||||| ||||||| ||||||| |
|
|
| T |
31679745 |
tgggtttgtctgtccgaagagtttgatgttttgagggtaaccagaactttacttgaatctatcacttcaaatgttcaggaaagtgataatcttgattttc |
31679646 |
T |
|
| Q |
242 |
ttcgagttgaactaaag-aaaactttgagagacaaaagatttttgtttgtgttggatgacctatggaatgacaattataatgattgg |
327 |
Q |
| |
|
||||||| || ||||| ||||||| || || ||||||||||||||||||||||||||| | |||||||| | |||||||||||| |
|
|
| T |
31679645 |
ttcgagtcaaattaaagcaaaacttgaaggga-aaaagatttttgtttgtgttggatgacatgtggaatgatagctataatgattgg |
31679560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 47 - 172
Target Start/End: Original strand, 825870 - 825995
Alignment:
| Q |
47 |
ttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcactttgatttcaaagcatgggc |
146 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||||||||| | |||||||||||||||| | |||||| | ||||| |||||||| |||| |||| |
|
|
| T |
825870 |
ttgcaattttaggtgatggaggtgttggtaaatcgacacttgctcgacttgtttacaatgataagaaagttgatgagcattttgatttgaaagtctgggt |
825969 |
T |
|
| Q |
147 |
ttgtgtatctgaggattttgatattt |
172 |
Q |
| |
|
|||||| | |||||||||||||||| |
|
|
| T |
825970 |
ttgtgtcaccgaggattttgatattt |
825995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 323
Target Start/End: Original strand, 826100 - 826149
Alignment:
| Q |
274 |
aaaagatttttgtttgtgttggatgacctatggaatgacaattataatga |
323 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||| | ||||||||| |
|
|
| T |
826100 |
aaaagatttttgtttgtgttggatggcttatggaatgatagttataatga |
826149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 28 - 299
Target Start/End: Original strand, 29836586 - 29836857
Alignment:
| Q |
28 |
aataacaatatcggtgttgttgcaattttaggtatgggaggtgttggtaaaacgacacttgcacaacttgtttacaatgatgaaaaagttcaagagcact |
127 |
Q |
| |
|
||||| ||||| ||||| || |||||| ||| ||||||||| | ||||||||||| || || | |||| | ||||| | ||| ||||| || | || | |
|
|
| T |
29836586 |
aataataatataggtgtagtcgcaattacaggcatgggaggtatcggtaaaacgaccctcgctcgacttatatacaaccaggaagaagttaaaaatcatt |
29836685 |
T |
|
| Q |
128 |
ttgatttcaaagcatgggcttgtgtatctgaggattttgatattttaactgtaactaaaactcttcttgaatctgtcacttcaagagcttgggaaaacaa |
227 |
Q |
| |
|
||||| | ||| |||| |||||| ||||| ||||||||||| || | ||||| ||| |||| |||||| |||||||||||||| ||| | | ||| |
|
|
| T |
29836686 |
ttgatgtacaagtctgggtttgtgtgtctgaagattttgatatgttgagagtaaccaaatctctccttgaagttgtcacttcaagagaatggaataccaa |
29836785 |
T |
|
| Q |
228 |
taatctagattttcttcgagttgaactaaagaaaactttgagagacaaaagatttttgtttgtgttggatga |
299 |
Q |
| |
|
||| || ||| |||||||||||||| | ||||||| ||||| |||||||||||||| |||| |||||||| |
|
|
| T |
29836786 |
taaccttgatcttcttcgagttgaattgaagaaaaatttgaacaacaaaagatttttgattgtattggatga |
29836857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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