View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3678_low_47 (Length: 250)
Name: NF3678_low_47
Description: NF3678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3678_low_47 |
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Alignment Details
Target: chr8 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 82 - 245
Target Start/End: Original strand, 4562473 - 4562636
Alignment:
| Q |
82 |
agtcactcactcaggtaaactctgattaatgaagacagtaaaaggtgaaagtgacttgttaatagaaaattgttcagaagctgaagtgagagtaaagagg |
181 |
Q |
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| T |
4562473 |
agtcactcactcaggtaaactctgattaatgaagacagtaaaaggtgaaagtgacttgttaatagaaaattgttcagaagctgaagtgagagtaaagagg |
4562572 |
T |
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| Q |
182 |
tataggtgttttgtagaaagatttttatttattcttttcttttgactattacacctttgcttct |
245 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
4562573 |
tataggtgttttgtagaaagatttttatttattcttttcttttgactattacacccttgcttct |
4562636 |
T |
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