View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3678_low_7 (Length: 551)

Name: NF3678_low_7
Description: NF3678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3678_low_7
NF3678_low_7
[»] chr3 (53 HSPs)
chr3 (1-542)||(25012094-25012634)
chr3 (288-542)||(24986586-24986840)
chr3 (1-111)||(21495582-21495694)
chr3 (1-107)||(4577764-4577872)
chr3 (3-110)||(35379886-35379993)
chr3 (1-134)||(40360347-40360485)
chr3 (1-111)||(41923356-41923469)
chr3 (1-109)||(1149298-1149406)
chr3 (1-110)||(45644144-45644255)
chr3 (1-111)||(29542024-29542137)
chr3 (1-98)||(42896755-42896853)
chr3 (2-108)||(9859834-9859941)
chr3 (1-110)||(19592074-19592181)
chr3 (1-109)||(2363482-2363590)
chr3 (1-111)||(7791203-7791315)
chr3 (1-110)||(50099032-50099143)
chr3 (1-63)||(14265819-14265882)
chr3 (1-91)||(27042349-27042438)
chr3 (1-103)||(42401510-42401614)
chr3 (3-63)||(38358675-38358735)
chr3 (1-111)||(43566574-43566686)
chr3 (1-115)||(2454199-2454315)
chr3 (33-104)||(285772-285845)
chr3 (1-90)||(3418815-3418904)
chr3 (3-111)||(27399996-27400108)
chr3 (1-110)||(51006194-51006303)
chr3 (1-111)||(17476387-17476499)
chr3 (1-91)||(22526406-22526498)
chr3 (1-63)||(30102526-30102589)
chr3 (36-111)||(1708647-1708722)
chr3 (5-110)||(3889906-3890007)
chr3 (1-98)||(5907269-5907363)
chr3 (20-110)||(19265865-19265955)
chr3 (2-111)||(23268058-23268173)
chr3 (1-109)||(39822543-39822653)
chr3 (33-111)||(2513317-2513395)
chr3 (13-110)||(7921899-7921997)
chr3 (49-111)||(14266447-14266509)
chr3 (45-111)||(17438690-17438756)
chr3 (49-111)||(33713113-33713175)
chr3 (1-61)||(45885820-45885879)
chr3 (1-91)||(49429106-49429199)
chr3 (46-111)||(1451459-1451524)
chr3 (12-68)||(3890560-3890617)
chr3 (1-54)||(3899781-3899833)
chr3 (31-111)||(5492935-5493016)
chr3 (49-110)||(22258196-22258257)
chr3 (1-110)||(24488043-24488154)
chr3 (280-353)||(24918876-24918948)
chr3 (1-41)||(7777593-7777633)
chr3 (1-90)||(21595091-21595183)
chr3 (1-110)||(25842363-25842473)
chr3 (1-85)||(54982632-54982719)
[»] chr2 (53 HSPs)
chr2 (1-111)||(36080251-36080362)
chr2 (1-111)||(18072399-18072509)
chr2 (1-110)||(41122694-41122803)
chr2 (1-107)||(41014294-41014400)
chr2 (1-107)||(10553201-10553308)
chr2 (1-111)||(6063358-6063473)
chr2 (1-111)||(38702172-38702285)
chr2 (1-110)||(41384440-41384548)
chr2 (1-89)||(12069467-12069554)
chr2 (1-89)||(12069662-12069749)
chr2 (1-110)||(30976937-30977047)
chr2 (1-78)||(9192109-9192187)
chr2 (3-111)||(9243611-9243723)
chr2 (2-110)||(15508613-15508723)
chr2 (1-111)||(16039368-16039481)
chr2 (1-110)||(19039848-19039957)
chr2 (3-98)||(26403243-26403339)
chr2 (1-111)||(28146092-28146203)
chr2 (1-91)||(19813842-19813937)
chr2 (33-111)||(24004496-24004574)
chr2 (1-91)||(33676686-33676775)
chr2 (1-111)||(9414978-9415092)
chr2 (2-98)||(40497512-40497611)
chr2 (6-91)||(42949759-42949846)
chr2 (3-110)||(1397097-1397203)
chr2 (1-63)||(13594246-13594309)
chr2 (1-90)||(19133439-19133530)
chr2 (1-63)||(20579336-20579399)
chr2 (1-88)||(36205176-36205266)
chr2 (3-111)||(41633685-41633795)
chr2 (49-111)||(35156371-35156433)
chr2 (1-110)||(24005033-24005140)
chr2 (1-91)||(35125899-35125991)
chr2 (55-111)||(36802457-36802513)
chr2 (31-111)||(1111142-1111226)
chr2 (33-111)||(25915155-25915234)
chr2 (52-111)||(27913141-27913200)
chr2 (1-110)||(37610026-37610131)
chr2 (49-108)||(40482834-40482893)
chr2 (12-54)||(3357683-3357725)
chr2 (20-110)||(9779643-9779733)
chr2 (31-111)||(22881519-22881603)
chr2 (49-111)||(34753276-34753337)
chr2 (1-62)||(38692578-38692640)
chr2 (1-58)||(42060418-42060476)
chr2 (1-111)||(4652419-4652527)
chr2 (49-110)||(32689990-32690051)
chr2 (45-110)||(42060699-42060764)
chr2 (1-110)||(43709465-43709579)
chr2 (12-63)||(13450179-13450228)
chr2 (1-54)||(19064098-19064153)
chr2 (14-107)||(21885273-21885368)
chr2 (1-63)||(24100694-24100760)
[»] chr7 (53 HSPs)
chr7 (1-110)||(4550333-4550443)
chr7 (1-110)||(39151814-39151922)
chr7 (2-111)||(14624467-14624580)
chr7 (1-110)||(32883153-32883263)
chr7 (1-98)||(25750871-25750967)
chr7 (1-110)||(19371748-19371859)
chr7 (33-111)||(16683151-16683229)
chr7 (33-111)||(17657387-17657465)
chr7 (1-111)||(21766138-21766252)
chr7 (3-108)||(19397069-19397178)
chr7 (1-99)||(47297420-47297518)
chr7 (1-110)||(1786979-1787089)
chr7 (33-111)||(38175037-38175115)
chr7 (1-98)||(39434958-39435055)
chr7 (1-111)||(45000879-45000992)
chr7 (1-111)||(4998212-4998326)
chr7 (31-110)||(46759550-46759630)
chr7 (49-108)||(20055708-20055767)
chr7 (1-90)||(23774830-23774923)
chr7 (1-90)||(2475017-2475107)
chr7 (1-111)||(39389541-39389656)
chr7 (1-110)||(7525835-7525947)
chr7 (1-54)||(20055635-20055688)
chr7 (31-110)||(8790855-8790935)
chr7 (2-111)||(7415840-7415953)
chr7 (1-91)||(10040433-10040524)
chr7 (1-90)||(36609798-36609885)
chr7 (1-86)||(372665-372751)
chr7 (33-111)||(7629037-7629114)
chr7 (1-110)||(15470839-15470951)
chr7 (49-111)||(37310327-37310389)
chr7 (49-110)||(8801601-8801662)
chr7 (1-90)||(23050890-23050978)
chr7 (1-54)||(25834580-25834632)
chr7 (1-109)||(38598485-38598593)
chr7 (1-98)||(46622333-46622425)
chr7 (26-87)||(48109678-48109738)
chr7 (1-78)||(5800774-5800853)
chr7 (31-110)||(32297844-32297924)
chr7 (31-98)||(41556310-41556378)
chr7 (43-110)||(1748203-1748270)
chr7 (33-111)||(42963238-42963317)
chr7 (34-109)||(46671074-46671149)
chr7 (1-110)||(9412687-9412796)
chr7 (49-107)||(19008348-19008406)
chr7 (27-85)||(24060077-24060135)
chr7 (1-111)||(39465850-39465965)
chr7 (45-90)||(23896729-23896774)
chr7 (49-110)||(27509715-27509775)
chr7 (1-54)||(48110268-48110321)
chr7 (41-89)||(5319355-5319403)
chr7 (3-63)||(5757236-5757299)
chr7 (67-111)||(20149410-20149454)
[»] chr4 (50 HSPs)
chr4 (1-110)||(39670184-39670291)
chr4 (1-110)||(549024-549133)
chr4 (5-111)||(26878555-26878662)
chr4 (1-111)||(35034748-35034861)
chr4 (1-103)||(7059383-7059487)
chr4 (4-110)||(13781502-13781609)
chr4 (1-98)||(27376281-27376379)
chr4 (1-111)||(46620566-46620679)
chr4 (1-98)||(1579972-1580068)
chr4 (1-111)||(30503154-30503265)
chr4 (1-111)||(37830960-37831071)
chr4 (33-111)||(49320423-49320502)
chr4 (1-91)||(160852-160941)
chr4 (1-110)||(5720350-5720460)
chr4 (2-111)||(554659-554771)
chr4 (2-91)||(1363749-1363840)
chr4 (3-91)||(4951561-4951648)
chr4 (31-111)||(17688089-17688169)
chr4 (1-110)||(20702379-20702492)
chr4 (1-86)||(50561177-50561264)
chr4 (1-108)||(25458869-25458973)
chr4 (1-110)||(52954114-52954225)
chr4 (49-111)||(13860404-13860466)
chr4 (1-98)||(26054411-26054504)
chr4 (36-110)||(2768800-2768875)
chr4 (1-98)||(19442670-19442766)
chr4 (7-111)||(36927004-36927109)
chr4 (43-94)||(48736820-48736871)
chr4 (43-94)||(48737114-48737165)
chr4 (43-94)||(48737408-48737459)
chr4 (1-83)||(6196667-6196754)
chr4 (1-111)||(26510177-26510290)
chr4 (33-111)||(893977-894057)
chr4 (49-110)||(2358709-2358770)
chr4 (33-110)||(35519120-35519196)
chr4 (49-109)||(37143728-37143788)
chr4 (1-108)||(2133562-2133672)
chr4 (20-63)||(20964791-20964833)
chr4 (1-110)||(35595541-35595648)
chr4 (1-87)||(56085083-56085166)
chr4 (1-54)||(594524-594575)
chr4 (49-111)||(7438187-7438249)
chr4 (36-90)||(30048100-30048154)
chr4 (36-90)||(30062441-30062495)
chr4 (1-110)||(49574905-49575013)
chr4 (49-110)||(7712668-7712729)
chr4 (49-110)||(18417167-18417228)
chr4 (49-110)||(26427060-26427121)
chr4 (5-90)||(2291004-2291090)
chr4 (47-111)||(27551000-27551064)
[»] chr1 (61 HSPs)
chr1 (1-111)||(17579846-17579957)
chr1 (1-110)||(45943314-45943426)
chr1 (3-110)||(27926465-27926572)
chr1 (1-111)||(24561250-24561363)
chr1 (1-111)||(35547109-35547222)
chr1 (1-111)||(25822066-25822177)
chr1 (12-110)||(34748854-34748953)
chr1 (1-110)||(46880084-46880194)
chr1 (1-108)||(115818-115927)
chr1 (1-111)||(40808690-40808802)
chr1 (1-90)||(48715827-48715918)
chr1 (1-110)||(8574039-8574149)
chr1 (1-111)||(11409006-11409119)
chr1 (1-111)||(12267088-12267201)
chr1 (12-110)||(29716951-29717048)
chr1 (1-89)||(47402758-47402846)
chr1 (1-103)||(12301039-12301142)
chr1 (1-107)||(33934074-33934181)
chr1 (1-111)||(15470487-15470600)
chr1 (12-110)||(29689439-29689536)
chr1 (31-109)||(32305610-32305688)
chr1 (1-110)||(43577428-43577537)
chr1 (4-111)||(44667760-44667868)
chr1 (14-110)||(15476461-15476558)
chr1 (1-98)||(35673739-35673833)
chr1 (5-110)||(43723815-43723919)
chr1 (1-110)||(12264916-12265026)
chr1 (31-110)||(49162766-49162846)
chr1 (1-111)||(773769-773879)
chr1 (1-91)||(12214085-12214175)
chr1 (1-110)||(16424507-16424618)
chr1 (33-111)||(31529884-31529963)
chr1 (12-110)||(31845140-31845239)
chr1 (1-90)||(24005006-24005095)
chr1 (1-55)||(27904336-27904390)
chr1 (25-78)||(16389000-16389053)
chr1 (45-110)||(39728292-39728357)
chr1 (4-111)||(44921858-44921968)
chr1 (50-134)||(49368360-49368447)
chr1 (70-110)||(5881216-5881256)
chr1 (31-87)||(8214041-8214097)
chr1 (1-84)||(12780250-12780334)
chr1 (47-110)||(27902889-27902952)
chr1 (1-110)||(34969284-34969390)
chr1 (12-54)||(8096275-8096317)
chr1 (48-98)||(14888416-14888466)
chr1 (12-63)||(16143439-16143491)
chr1 (1-111)||(23773299-23773414)
chr1 (1-63)||(25298076-25298141)
chr1 (12-62)||(46997001-46997051)
chr1 (37-110)||(50884583-50884657)
chr1 (1-90)||(773130-773221)
chr1 (49-110)||(11407418-11407479)
chr1 (12-90)||(11978258-11978338)
chr1 (1-111)||(33326704-33326815)
chr1 (1-110)||(40403434-40403546)
chr1 (1-54)||(48419580-48419633)
chr1 (1-110)||(5935573-5935684)
chr1 (1-54)||(13315212-13315267)
chr1 (1-89)||(14386893-14386984)
chr1 (20-111)||(17875326-17875416)
[»] chr5 (37 HSPs)
chr5 (1-91)||(36700807-36700899)
chr5 (2-111)||(17704916-17705027)
chr5 (1-111)||(7648988-7649099)
chr5 (1-122)||(27832332-27832455)
chr5 (1-98)||(38696949-38697046)
chr5 (1-110)||(7938063-7938172)
chr5 (1-107)||(25754505-25754611)
chr5 (36-111)||(42506544-42506619)
chr5 (1-106)||(42918892-42919001)
chr5 (1-107)||(8990376-8990485)
chr5 (5-110)||(28095939-28096044)
chr5 (1-109)||(5769755-5769867)
chr5 (1-111)||(42207855-42207967)
chr5 (31-88)||(43241555-43241612)
chr5 (1-110)||(24836789-24836900)
chr5 (3-111)||(30735802-30735910)
chr5 (1-111)||(41862883-41862995)
chr5 (1-111)||(15988221-15988332)
chr5 (33-111)||(17064701-17064780)
chr5 (1-78)||(25793703-25793780)
chr5 (2-99)||(31659417-31659516)
chr5 (50-111)||(36092285-36092346)
chr5 (1-110)||(42027581-42027694)
chr5 (1-110)||(42097512-42097623)
chr5 (50-111)||(15232129-15232190)
chr5 (49-110)||(40716296-40716357)
chr5 (12-91)||(834488-834567)
chr5 (36-111)||(1093880-1093956)
chr5 (4-110)||(1611577-1611687)
chr5 (34-111)||(36526515-36526594)
chr5 (13-129)||(38445456-38445579)
chr5 (1-110)||(19128530-19128645)
chr5 (1-110)||(33629195-33629303)
chr5 (1-111)||(35402749-35402862)
chr5 (1-110)||(8786646-8786754)
chr5 (1-74)||(25781968-25782044)
chr5 (2-110)||(41613068-41613171)
[»] scaffold0123 (1 HSPs)
scaffold0123 (2-110)||(30782-30890)
[»] scaffold0037 (4 HSPs)
scaffold0037 (1-90)||(57116-57206)
scaffold0037 (1-90)||(64241-64331)
scaffold0037 (12-108)||(56748-56846)
scaffold0037 (12-108)||(63873-63971)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-111)||(44274-44387)
[»] chr6 (34 HSPs)
chr6 (33-111)||(9894358-9894436)
chr6 (1-99)||(20715857-20715955)
chr6 (1-109)||(7451657-7451762)
chr6 (1-111)||(12169823-12169937)
chr6 (12-110)||(3833821-3833919)
chr6 (5-111)||(30233317-30233427)
chr6 (1-111)||(14662270-14662383)
chr6 (1-110)||(31861868-31861977)
chr6 (1-86)||(19146131-19146215)
chr6 (15-111)||(22837436-22837532)
chr6 (1-111)||(14426666-14426780)
chr6 (5-111)||(7771733-7771838)
chr6 (1-91)||(8771671-8771762)
chr6 (1-111)||(34638021-34638134)
chr6 (1-111)||(21104581-21104693)
chr6 (1-110)||(28711927-28712033)
chr6 (31-110)||(172833-172912)
chr6 (2-85)||(23124419-23124505)
chr6 (49-108)||(33573424-33573483)
chr6 (36-111)||(34352145-34352220)
chr6 (12-62)||(2485939-2485988)
chr6 (1-110)||(12184899-12185007)
chr6 (5-110)||(21254447-21254553)
chr6 (49-111)||(33573538-33573600)
chr6 (49-110)||(26252886-26252947)
chr6 (1-110)||(17353129-17353236)
chr6 (2-62)||(24062668-24062727)
chr6 (3-111)||(26251875-26251988)
chr6 (1-60)||(32531148-32531207)
chr6 (49-111)||(4075852-4075914)
chr6 (1-63)||(22535450-22535511)
chr6 (1-57)||(32333280-32333337)
chr6 (49-101)||(28548769-28548821)
chr6 (1-54)||(29350500-29350555)
[»] chr8 (36 HSPs)
chr8 (40-111)||(2079294-2079366)
chr8 (1-109)||(45488996-45489109)
chr8 (1-110)||(18638237-18638343)
chr8 (3-84)||(27837575-27837655)
chr8 (1-111)||(45356403-45356514)
chr8 (1-111)||(5182580-5182693)
chr8 (13-111)||(15044220-15044321)
chr8 (1-110)||(12191906-12192014)
chr8 (1-110)||(12436334-12436442)
chr8 (12-110)||(4430148-4430246)
chr8 (2-110)||(38498524-38498627)
chr8 (1-111)||(41666686-41666799)
chr8 (33-111)||(42862621-42862699)
chr8 (2-110)||(1170529-1170633)
chr8 (1-110)||(28205457-28205565)
chr8 (1-111)||(7019979-7020085)
chr8 (1-86)||(15919509-15919596)
chr8 (49-111)||(12838643-12838705)
chr8 (3-89)||(17840990-17841081)
chr8 (49-110)||(30800539-30800600)
chr8 (1-53)||(3739602-3739654)
chr8 (2-78)||(93040-93118)
chr8 (43-110)||(24023233-24023300)
chr8 (1-111)||(5049709-5049824)
chr8 (3-111)||(12542594-12542706)
chr8 (45-111)||(14436600-14436666)
chr8 (2-89)||(20285682-20285771)
chr8 (2-89)||(21072311-21072400)
chr8 (5-110)||(30264158-30264265)
chr8 (49-111)||(30682544-30682606)
chr8 (31-111)||(8512006-8512087)
chr8 (3-98)||(23085494-23085585)
chr8 (1-54)||(34966723-34966775)
chr8 (67-111)||(5824699-5824743)
chr8 (2-62)||(18994696-18994755)
chr8 (70-110)||(45440749-45440789)
[»] scaffold0293 (2 HSPs)
scaffold0293 (13-111)||(4077-4176)
scaffold0293 (12-111)||(3716-3817)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-110)||(41485-41594)
[»] scaffold0649 (1 HSPs)
scaffold0649 (13-111)||(8369-8470)
[»] scaffold0263 (1 HSPs)
scaffold0263 (5-110)||(22179-22287)
[»] scaffold0196 (1 HSPs)
scaffold0196 (1-86)||(8666-8750)
[»] scaffold0707 (1 HSPs)
scaffold0707 (49-111)||(307-369)
[»] scaffold0193 (1 HSPs)
scaffold0193 (33-110)||(21451-21529)
[»] scaffold0734 (2 HSPs)
scaffold0734 (1-89)||(3998-4089)
scaffold0734 (1-85)||(3805-3887)
[»] scaffold0137 (1 HSPs)
scaffold0137 (4-110)||(6867-6971)
[»] scaffold0128 (1 HSPs)
scaffold0128 (21-111)||(43068-43160)
[»] scaffold0003 (1 HSPs)
scaffold0003 (13-110)||(227229-227327)


Alignment Details
Target: chr3 (Bit Score: 423; Significance: 0; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 1 - 542
Target Start/End: Complemental strand, 25012634 - 25012094
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25012634 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttttgttatattgctagtttcattgaaacagataatcatggatagttta 25012535  T
Q  100 atttgttataatcaaaatcaaaatttcatataaaatcactgcttcannnnnnncaaacgttagcgcagtgaaagaagcggaaagatgggcacccgtcttt 199  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||        ||||||||||||||| ||| |||||||||||||| |||||||||||    
T  25012534 atttattataatcaaaatcaaaatttcatataaaatcactg-ttcataatttttaaacgttagcgcagtaaaaaaagcggaaagatggacacccgtcttt 25012436  T
Q  200 tcgctagtatataagttgggagggagatctcacacaaaaactaaatcagtactactatgtggattcaagttacgagaataatttaaaaattgagataaaa 299  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25012435 tcgctagtatatacggtgggagggagatctcacacaaaaactaaatca-tactactatgtggattcaagttacgagaataatttaaaaattgagataaaa 25012337  T
Q  300 attgtgatttgttgggaaagttcatcacgtatttgttggtctcctaattaattttctatttgatctttatgcttaattaagtttctctatattctatgtt 399  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25012336 attgtgatttgttgggaaagttcatcacgtatatgttggtctcctaattaattttctatttgatctttatgcttaattaagtttctctatattctatgtt 25012237  T
Q  400 cttcactaaactatcattatattgtttaattaaatgtagcttc-nnnnnnnnaagttatctcttttgttaatcgttcattttcttgaaaagaagctttgt 498  Q
    |||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25012236 cttcactaaactatcattatattgtttaattaaatgtagcttctttttttttaagttatctcttttgttaatcgttcattttcttgaaaagaagc-ttgt 25012138  T
Q  499 tattacagtcattttgttcctctaatgttcagtcttggtctgtg 542  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  25012137 tattacagtcattttgttcctctgatgttcagtcttggtctgtg 25012094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 288 - 542
Target Start/End: Complemental strand, 24986840 - 24986586
Alignment:
Q  288 attgagataaaaattgtgatttgttgggaaagttcatcacgtatttgttggtctcctaattaattttctatttgatctttatgcttaattaagtttctct 387  Q
    ||||||||||| | |||||||||||| | |||||||||| || | | |||||||| ||||||||||||||||||||||||||  |||| ||||||||| |    
T  24986840 attgagataaatactgtgatttgttgagcaagttcatcatgtttatattggtctcttaattaattttctatttgatctttatctttaactaagtttcttt 24986741  T
Q  388 atattctatgttcttcactaaactatcattatattgtttaattaaatgtagcttc--nnnnnnnnaagttatctcttttgttaatcgttcattttcttga 485  Q
     |||||| |||||||||||||||||||||||||||||||||||||||||||||||          || | ||| ||||||||||| |||||||||| |||    
T  24986740 ttattctgtgttcttcactaaactatcattatattgtttaattaaatgtagcttcttctttttttaaataatcccttttgttaattgttcattttcctga 24986641  T
Q  486 aaagaagctttgttattacagtcattttgttcctctaatgttcagtcttggtctgtg 542  Q
    |||| |||||  |||||| ||||||||||||||| | ||||||  ||||||||||||    
T  24986640 aaagtagctt--ttattatagtcattttgttcctatgatgttctttcttggtctgtg 24986586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 21495582 - 21495694
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| ||||| |||| |||  |||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||  || |||    
T  21495582 taataaagattgttgttggtgtcagtaaacaaataagaatttagattatattttttgttatattgttagtttcattgaaatagataatcatgattaattt 21495681  T
Q  99 aatttgttataat 111  Q
     ||||||||||||    
T  21495682 gatttgttataat 21495694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4577872 - 4577764
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| ||||||| || ||||||||||| ||||||||||||  ||||||||| | || ||||||||| |||||||||||| ||||||    
T  4577872 taataaagattgttgttggtgtcatttaaaaaaagaatttatattatattttttttgttatattgttggtatcattgaaatagataatcatgggtagttt 4577773  T
Q  99 aatttgtta 107  Q
     ||||||||    
T  4577772 gatttgtta 4577764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 35379886 - 35379993
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatt 102  Q
    |||||||| ||||||| |||||||||| ||| ||||||| ||||||||||||||||||||  | || ||||||||| ||||||||| || ||||||  ||    
T  35379886 ataaagattgttgttggtgtcattaaaaaaaggaatttagattatattttttgttatattattggtgtcattgaaatagataatcaaggttagtttggtt 35379985  T
Q  103 tgttataa 110  Q
    ||||||||    
T  35379986 tgttataa 35379993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 40360347 - 40360485
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt-- 98  Q
    |||||||||| ||||||| |||||||||| ||||||||||| |||||||||||| |||||||| | || ||||| ||| |||||||||||| ||||||      
T  40360347 taataaagattgttgttggtgtcattaaa-aaaagaatttagattatatttttttttatattgttggtgtcattaaaatagataatcatggttagttttt 40360445  T
Q  99 -aattt---gttataatcaaaatcaaaatttcatataaaa 134  Q
      ||||   ||| |||||||||||||||||||||| ||||    
T  40360446 atatttttagttttaatcaaaatcaaaatttcataaaaaa 40360485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 41923356 - 41923469
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa-gaatttaaattatatttt--ttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    ||||||| || ||||||| |||||||||| |||| ||||||| ||||||||||  ||||||||||| | | |||||||||| |||||||||||| |||||    
T  41923356 taataaaaattgttgttggtgtcattaaaaaaaaagaatttagattatattttttttgttatattgttggattcattgaaatagataatcatggttagtt 41923455  T
Q  98 taatttgttataat 111  Q
    | ||||||||||||    
T  41923456 tgatttgttataat 41923469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 1149406 - 1149298
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| | || ||||| ||||||||||| |||||||||||| ||||||||| | |||||||| ||| |||||||||||| ||||||     
T  1149406 taataaagattgttgttggtctc-ttaaaaaaaagaatttagattatatttttttgttatattgttggtttcattaaaatagataatcatggttagtttg 1149308  T
Q  100 atttgttata 109  Q
    ||||||||||    
T  1149307 atttgttata 1149298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45644144 - 45644255
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataa-aagaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| || |||| |||||||||| || || |||||| |||||||||| ||||||||||| | || ||||||||| |||||||||||||||||||    
T  45644144 taataaagattgtcgttggtgtcattaaaaaataataatttagattatattttattgttatattgttggtgtcattgaaatagataatcatggatagttt 45644243  T
Q  99 aatttgttataa 110  Q
      ||||||||||    
T  45644244 ggtttgttataa 45644255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 29542137 - 29542024
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||  |||||||||| |||  |||||||| |||||||||||| ||||||||| | || ||||||||| |||||||||||| |||||    
T  29542137 taataaagattgttgtttatgtcattaaaaaaataagaatttatattatatttttttgttatattgttggtgtcattgaaatagataatcatggttagtt 29542038  T
Q  98 taatttgttataat 111  Q
    | ||||| ||||||    
T  29542037 tgatttgctataat 29542024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 42896853 - 42896755
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatt-ttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||||||  |||||| |||||||||| ||||||||||| |||||||| ||||||||||||| | || ||||||||| ||||||| |||| ||||||    
T  42896853 taataaagatgtttgttggtgtcattaaaaaaaagaatttagattatatttttttgttatattgttggtgtcattgaaatagataatgatggttagttt 42896755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 9859941 - 9859834
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaaagaatttaaattatatt-ttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    ||||||||| ||||||  |||| ||||| ||||||||||| |||||||| ||||||||||||| | || ||| | ||| |||||||||||| |||||| |    
T  9859941 aataaagattgttgttagtgtcgttaaaaaaaagaatttagattatatttttttgttatattgttggtgtcaatcaaatagataatcatggttagtttga 9859842  T
Q  101 tttgttat 108  Q
    ||||||||    
T  9859841 tttgttat 9859834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19592181 - 19592074
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||| ||||| |||| || |||||||||| |||| |  ||| ||||||||||||||||||||| | || ||||||||| |||||||||||| ||||||      
T  19592181 taattaagattgttgatggtgtcattaaaaaaaaaa--ttagattatattttttgttatattgttggtgtcattgaaatagataatcatggttagtttgc 19592084  T
Q  101 tttgttataa 110  Q
    ||||||||||    
T  19592083 tttgttataa 19592074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 2363590 - 2363482
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||| |||||| |||||||  | || ||||| ||| |||||||||||| | ||||     
T  2363590 taataaagattgttgttggtgtcattaaa-aaaagaatttaaattatacttttttattatattattggtgtcattaaaatagataatcatggttcgtttg 2363492  T
Q  100 atttgttata 109  Q
     |||||||||    
T  2363491 gtttgttata 2363482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 7791315 - 7791203
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataa-aagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||| || ||||||| |||||||||| || ||||||||| |||||||||||| ||| |||||   || ||||||||| |||||||||||| ||| ||    
T  7791315 taataaatattgttgttggtgtcattaaaaaataagaatttagattatatttttttgttttattgtcggtgtcattgaaatagataatcatggttagctt 7791216  T
Q  99 aatttgttataat 111  Q
     ||||||||||||    
T  7791215 gatttgttataat 7791203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50099032 - 50099143
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttt--tgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| ||| | ||||| |||||||||||  ||||||||||   || ||||||||| ||||| |||| | ||||||    
T  50099032 taataaagattgttgttggtgtcattaaaaaaaggcatttagattatattttttctgttatattgtgggtgtcattgaaatagatagtcattgttagttt 50099131  T
Q  99 aatttgttataa 110  Q
     |||||||||||    
T  50099132 gatttgttataa 50099143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 14265819 - 14265882
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatat-tttttgttatattg 63  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||||| ||||||||||||||    
T  14265819 taataaagattgttgttgatgtcattaaaaaaaagaatttagattatatatttttgttatattg 14265882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 27042349 - 27042438
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    |||||||||| ||||||  |||||||||| ||| ||||||| ||||| |||||||||| |||| | || ||||||||| ||||||||||||    
T  27042349 taataaagattgttgttaatgtcattaaaaaaatgaatttagattat-ttttttgttacattgttggtgtcattgaaatagataatcatgg 27042438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 42401614 - 42401510
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatt--ttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||| ||| ||||||| |||| ||||| ||||||||||| ||||||||  |||||||||||||    | ||||||||| |||||||||||| ||||||    
T  42401614 taataatgattgttgttggtgtcgttaaaaaaaagaatttatattatattttttttgttatattgtcgatgtcattgaaatagataatcatggttagttt 42401515  T
Q  99 aattt 103  Q
     ||||    
T  42401514 gattt 42401510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 38358675 - 38358735
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattg 63  Q
    |||||||| ||||||| |||||||||| ||||||||||| || ||||||||| ||||||||    
T  38358675 ataaagattgttgttggtgtcattaaaaaaaagaatttacataatatttttttttatattg 38358735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 43566686 - 43566574
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaat-ttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||  |||||||||| |||| ||  |||||||||||||||| ||||||||| |  | || |||||| |||||||||||  ||||||    
T  43566686 taataaagattgttgttaatgtcattaaagaaaaaaaaattaaattatatttttttgttatattgttgatgtctttgaaatagataatcatgtttagttt 43566587  T
Q  99 aatttgttataat 111  Q
    ||||| |||||||    
T  43566586 aatttattataat 43566574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 2454199 - 2454315
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttt---ttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||| | | |||||||| ||||| ||||| |||| |||||   ||||||||||| | || ||||||||| |||||||||||| |||||    
T  2454199 taataaagattgttgtcggtatcattaaa-aaaaggatttagattacatttttttttgttatattgttggtgtcattgaaatagataatcatggttagtt 2454297  T
Q  98 taatttgttataatcaaa 115  Q
    |  |||||||||| ||||    
T  2454298 tggtttgttataaacaaa 2454315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 285845 - 285772
Alignment:
Q  33 aagaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatggatagtttaatttg 104  Q
    ||||||||||||||||| ||||  ||||||||| |||| ||||||||| |||||||||||  | ||||||||||    
T  285845 aagaatttaaattatatattttatgttatattgttagtgtcattgaaatagataatcatgatttgtttaatttg 285772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 3418815 - 3418904
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatt-ttttgttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||||||| ||||||| | |||||||| ||||||||||| |||||||| |||||||||| || |  | ||||||||| |||||||||||    
T  3418815 taataaagattgttgttggtatcattaaa-aaaagaatttagattatattcttttgttatagtgttgatgtcattgaaatagataatcatg 3418904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 27400108 - 27399996
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaa---gaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||  ||||||| |||||||||||||||   ||||||| |||||||||||| ||||||||| |  ||||||  ||| | |||||||||| ||||||    
T  27400108 ataaagaatgttgttggtgtcattaaataaaataagaatttagattatatttttttgttatattgttgatttcatcaaaatatataatcatggttagttt 27400009  T
Q  99 aatttgttataat 111  Q
     || |||||||||    
T  27400008 gatatgttataat 27399996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 51006194 - 51006303
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||| ||||| ||||||||||| |||||||||||| |||  |||| |  | ||||||||| | |||||||||  ||||||     
T  51006194 taataaagattgttgttggtgtcgttaaa-aaaagaatttagattatatttttttgttccattgttgatgtcattgaaataaataatcatgattagtttg 51006292  T
Q  100 atttgttataa 110  Q
    |||||||||||    
T  51006293 atttgttataa 51006303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 17476387 - 17476499
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttt--ttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| ||| |||||| ||||| ||||| ||| | ||||  ||||||||||| | || ||||||||| ||||| |||||  ||||||    
T  17476387 taataaagattgttgttgatgtgattaaaaaaaaggatttagatttttttttttttgttatattgttggtgtcattgaaatagatattcatgtttagttt 17476486  T
Q  99 aatttgttataat 111  Q
      |||||||||||    
T  17476487 ggtttgttataat 17476499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 22526406 - 22526498
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattata--ttttttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    ||||||||||  |||||| | ||||| || ||||||||||| ||||||  ||||||||||||||| | || ||||||||| ||||||| ||||    
T  22526406 taataaagattattgttggtctcattcaaaaaaagaatttagattatattttttttgttatattgtttgtgtcattgaaatagataattatgg 22526498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 30102589 - 30102526
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatat--tttttgttatattg 63  Q
    |||||||||| ||||||| |||||||||| ||||||||||| |||||||  ||||||||||||||    
T  30102589 taataaagatcgttgttggtgtcattaaa-aaaagaatttagattatattctttttgttatattg 30102526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 1708722 - 1708647
Alignment:
Q  36 aatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||| ||||||||||||||||||||| | | |||||||||| | ||||| || | |||||| |||| |||||||    
T  1708722 aatttagattatattttttgttatattgttggcttcattgaaatatataattattgttagtttgatttattataat 1708647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 3890007 - 3889906
Alignment:
Q  5 aaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttg 104  Q
    |||||| ||||||| ||||||||||| |||||||||| ||||||| |||| |||||| |   || ||||||||| | |||||||||  ||||||  ||||    
T  3890007 aaagattgttgttggtgtcattaaat-aaagaatttatattatatatttttttatatcg---gtgtcattgaaataaataatcatgattagtttggtttg 3889912  T
Q  105 ttataa 110  Q
    ||||||    
T  3889911 ttataa 3889906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 5907363 - 5907269
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||   ||||| || ||| ||||||||||||||||||| | |  | ||||||||| ||||| |||||| ||||||    
T  5907363 taataaagattgttgttggtgtcatt---taaaaaaaattagattatattttttgttatatggttgatgtcattgaaatagatattcatggttagttt 5907269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 19265955 - 19265865
Alignment:
Q  20 tgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||   || |  |||||| |||||||||||| |||||| |||| ||||||    
T  19265955 tgtcattaaa-aaaagaatttagattatatttttttgttatattgtcggtgttgttgaaatagataatcatggttagtttgattttttataa 19265865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 23268058 - 23268173
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaaa----gaatttaaattatatttt--ttgttatattgctagtttcattgaaacagataatcatggatag 95  Q
    ||||||||| ||| ||| |||||||||| ||||    ||||||||||||||||||  |||||||| || | || ||||||||| | ||| |||||  |||    
T  23268058 aataaagattgttattggtgtcattaaaaaaaaataagaatttaaattatattttttttgttatactgttggtgtcattgaaataaatattcatgattag 23268157  T
Q  96 tttaatttgttataat 111  Q
    ||| ||||||||||||    
T  23268158 tttgatttgttataat 23268173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 39822653 - 39822543
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatat--tttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||  ||||| | ||||||||| |||||||  |||||||||||||  | || ||||||||| | |||||| ||  ||||||    
T  39822653 taataaagattgttgttggtgttgttaaaaacaagaatttatattatatcttttttgttatattattggtatcattgaaataaataatcgtgattagttt 39822554  T
Q  99 aatttgttata 109  Q
     ||||||||||    
T  39822553 gatttgttata 39822543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 2513395 - 2513317
Alignment:
Q  33 aagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||| || |||| |||| |||||||| | || ||||||||| |||||| ||||| || |||| |||||||||||    
T  2513395 aagaatttagataatatattttattatattgttggtgtcattgaaatagataaacatggttaatttagtttgttataat 2513317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 7921899 - 7921997
Alignment:
Q  13 ttgttgttgtcattaaataaaagaatttaaattatattt-tttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    |||||| ||||| |||| || |||||||| ||||||||| |||||||||||| | || ||||||||| | ||| |||||  |||||| | |||||||||    
T  7921899 ttgttggtgtcagtaaaaaagagaatttagattatatttgtttgttatattgttggtgtcattgaaataaatagtcatgattagtttgacttgttataa 7921997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 14266447 - 14266509
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||| |  ||||||||||| ||||||||||   |||||| ||||||||||||    
T  14266447 ttttttgttatattgttgatttcattgaaatagataatcataattagtttgatttgttataat 14266509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 17438756 - 17438690
Alignment:
Q  45 tatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||||||| |||||||| | |||||||||||| | |||||||| | |||||| ||||| ||||||    
T  17438756 tatattttttattatattgttggtttcattgaaatatataatcatagttagtttgatttgatataat 17438690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 33713113 - 33713175
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||| | |||||||||||| |||||||||| | ||  || ||||||||||||    
T  33713113 ttttttgttatattgtttgtttcattgaaatagataatcatagttaaattgatttgttataat 33713175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 45885820 - 45885879
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattt-tttgttatat 61  Q
    |||||||||| ||||||| ||||||||||  |||||||||| ||||||||| ||||||||||    
T  45885820 taataaagattgttgttggtgtcattaaa--aaagaatttagattatatttatttgttatat 45885879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 49429199 - 49429106
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataa--aagaatttaaattatatt-ttttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    |||||||||| ||||||| |||||||||| ||  ||||||||| |||||||| |||| || ||||  | |||| ||||||| ||||||||||||    
T  49429199 taataaagattgttgttggtgtcattaaaaaattaagaatttagattatatttttttattctattattggtttaattgaaatagataatcatgg 49429106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 1451524 - 1451459
Alignment:
Q  46 atattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||||||||||||||  | || ||||||||| |||||||||||  |||||| |||||| |||||    
T  1451524 atattttttgttatattattggtgtcattgaaatagataatcatgattagtttgatttgtgataat 1451459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 3890560 - 3890617
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattat-attttttgttatattgctagt 68  Q
    ||||||| ||| |||||| ||||||||||| ||||| |||||||||||||||| ||||    
T  3890560 gttgttggtgtaattaaaaaaaagaatttagattataattttttgttatattgttagt 3890617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3899833 - 3899781
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt 54  Q
    |||||||||| ||||||| |||||||||| ||||||||||  ||||||||||||    
T  3899833 taataaagattgttgttgatgtcattaaa-aaaagaatttgtattatatttttt 3899781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 5493016 - 5492935
Alignment:
Q  31 aaaagaatttaaattatattttttg-ttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||| ||| ||||||||  |||||||| | |||||||| ||| | | |||||||| |||||| ||||||||||||    
T  5493016 aaaagaatttagattttatttttttattatattgttggtttcattcaaataaacaatcatggttagtttgatttgttataat 5492935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 22258196 - 22258257
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||| | || ||||||||| |||||||||| | ||||||  ||||||||||    
T  22258196 ttttttgttatattgttggtgtcattgaaatagataatcatagttagtttggtttgttataa 22258257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24488043 - 24488154
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa--gaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    ||||||||||  |||||| |||||||||| ||||  ||||||| || ||| ||||||||||||||| | || | ||||||| ||||||| |||| |||||    
T  24488043 taataaagattcttgttggtgtcattaaagaaaaaagaatttacataatatttttttgttatattg-tggtgttattgaaatagataattatggttagtt 24488141  T
Q  98 taatttgttataa 110  Q
    |  ||||||||||    
T  24488142 tggtttgttataa 24488154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 353
Target Start/End: Complemental strand, 24918948 - 24918876
Alignment:
Q  280 atttaaaaattgagataaaaattgtgatttgttgggaaagttcatcacgtatttgttggtctcctaattaattt 353  Q
    ||||||| ||||||| |||||||||||||||||  | |||| |||||||  ||||||| ||| |||||||||||    
T  24918948 atttaaatattgagagaaaaattgtgatttgttaagtaagtacatcacg-ctttgttgatcttctaattaattt 24918876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7777593 - 7777633
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaattta 41  Q
    |||||||||| ||||||| |||||||||| |||||||||||    
T  7777593 taataaagatcgttgttggtgtcattaaaaaaaagaattta 7777633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21595183 - 21595091
Alignment:
Q  1 taataaagatagttgttgttgtcattaaa-taa-aagaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatg 90  Q
    ||||||| || ||||||| |||||||||| ||| || |||||| ||||| | ||||||||||| || | |||||||||||| |||||||||||    
T  21595183 taataaatattgttgttgatgtcattaaaataataataatttagattatgtatttttgttatactgttggtttcattgaaatagataatcatg 21595091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25842363 - 25842473
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttt--ttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| | |||||||| |||| |||  | ||||||||||  ||||||||||| | || ||||| ||| | |||||||||| ||||||    
T  25842363 taataaagatcgttgttgatatcattaaaaaaaa-aatcaagattatattttttttgttatattgttggtgtcattaaaataaataatcatggttagttt 25842461  T
Q  99 aatttgttataa 110  Q
      ||||||||||    
T  25842462 cgtttgttataa 25842473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 54982632 - 54982719
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa--gaatttaaattatat-tttttgttatattgctagtttcattgaaacagataa 85  Q
    |||||| ||| ||||||| |||||||||| | |   ||||||||||||||| |||||||||||||| | || ||||||||| ||||||    
T  54982632 taataatgattgttgttggtgtcattaaaaagataggaatttaaattatatgtttttgttatattgttggtgtcattgaaatagataa 54982719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 36080251 - 36080362
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||||||||| | ||||||||| |||||||||| ||||||||||| | |||||||||||| ||||||| |||| ||||||     
T  36080251 taataaagattgttgttggtgtcattaaaaataagaatttagattatatttttttgttatattgttggtttcattgaaatagataattatggttagtttg 36080350  T
Q  100 atttgttataat 111  Q
    ||||||||||||    
T  36080351 atttgttataat 36080362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 18072399 - 18072509
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||||||||| ||||||||| | |||||||||||| | |||||||||| || ||| |    
T  18072399 taataaagattgttgttggtgtcattaaaaaaaagaatttagattatatttttcgttatattgttggtttcattgaaatatataatcatggttaatttga 18072498  T
Q  101 tttgttataat 111  Q
    | |||||||||    
T  18072499 tctgttataat 18072509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41122694 - 41122803
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||||  | || ||||| ||  |||||||||||| | |||| |    
T  41122694 taataaagattgttgttggtgtcattaaaaaaaagaatttagattatattttttgttatattattggtatcattaaactagataatcatggttcgtttga 41122793  T
Q  101 tttgttataa 110  Q
    ||||||||||    
T  41122794 tttgttataa 41122803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 41014294 - 41014400
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    ||||||| || ||||||| ||||||||||  |||||||||| ||||||||||||||||||||| |  | ||||||||||| |||||||||| ||||||      
T  41014294 taataaatattgttgttgatgtcattaaaataaagaatttagattatattttttgttatattgttgctatcattgaaacaaataatcatggttagtttgg 41014393  T
Q  101 tttgtta 107  Q
    |||||||    
T  41014394 tttgtta 41014400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10553201 - 10553308
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa-gaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    ||||||| || ||||||| |||||||||| |||| ||||||| ||| | ||||||||||||||| | || ||||||||| |||||||||||| ||||||     
T  10553201 taataaaaattgttgttggtgtcattaaaaaaaatgaatttagattttgttttttgttatattgttggtgtcattgaaatagataatcatggttagtttg 10553300  T
Q  100 atttgtta 107  Q
    ||||||||    
T  10553301 atttgtta 10553308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 6063358 - 6063473
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa---gaatttaaattatatttt--ttgttatattgctagtttcattgaaacagataatcatggatag 95  Q
    |||||||||| |||| || |||||||||| ||||   ||||||| ||||||||||  ||||||||||| | |||||||||||| |||||||||||  |||    
T  6063358 taataaagattgttgctgatgtcattaaaaaaaataagaatttagattatattttttttgttatattgttggtttcattgaaatagataatcatgattag 6063457  T
Q  96 tttaatttgttataat 111  Q
    ||| ||||||||||||    
T  6063458 ttttatttgttataat 6063473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 38702285 - 38702172
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| |||||||||| |||  |||||||| ||||||| |||||||||||||| | |||||||||||| | |||||||| | |||||    
T  38702285 taataaagattgttgttggtgtcattaaaaaaataagaatttagattatatatttttgttatattgttggtttcattgaaataaataatcattgttagtt 38702186  T
Q  98 taatttgttataat 111  Q
    | |||| |||||||    
T  38702185 tgatttattataat 38702172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41384548 - 41384440
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    ||||||||||  ||| || | |||||||| ||||||||||| ||||||||||||||||||||| | |  ||||||||| |||||||||| | |||||| |    
T  41384548 taataaagatttttgatggtatcattaaa-aaaagaatttagattatattttttgttatattgttggcgtcattgaaatagataatcatagttagtttta 41384450  T
Q  101 tttgttataa 110  Q
    ||||||||||    
T  41384449 tttgttataa 41384440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12069467 - 12069554
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcat 89  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||||| | || ||||| ||| | ||||||||    
T  12069467 taataaagattgttgttggtgtcattaaa-aaaagaatttagattatattttttgttatattgttggtgtcatttaaatatataatcat 12069554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12069662 - 12069749
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcat 89  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||||| | || ||||| ||| | ||||||||    
T  12069662 taataaagattgttgttggtgtcattaaa-aaaagaatttagattatattttttgttatattgttggtgtcatttaaatatataatcat 12069749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30977047 - 30976937
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatat--tttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| ||||||||||| |||||||  |||||| ||||||| |  | ||||||||| |||||||||||| || |||    
T  30977047 taataaagattgttgttggtgtcattaaa-aaaagaatttagattatatattttttgatatattgttgatgtcattgaaatagataatcatggttatttt 30976949  T
Q  99 aatttgttataa 110  Q
    | ||||||||||    
T  30976948 agtttgttataa 30976937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9192187 - 9192109
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatt-ttttgttatattgctagtttcattgaaa 78  Q
    |||||||||| ||||||| |||||||| | |||||||||||||||||||| ||||||||||||| | || |||||||||    
T  9192187 taataaagattgttgttgatgtcattacaaaaaagaatttaaattatatttttttgttatattgttggtgtcattgaaa 9192109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 9243723 - 9243611
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaa---gaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||| |||||| ||||||||||| ||||   ||||||||| |||||||||| ||||||||  | || ||||||||| ||||| |||||| ||||||    
T  9243723 ataaagattgttgttattgtcattaaaaaaaaaaagaatttaaagtatatttttttgttatattattggtatcattgaaatagatattcatggttagttt 9243624  T
Q  99 aatttgttataat 111  Q
     ||||||||||||    
T  9243623 gatttgttataat 9243611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 15508613 - 15508723
Alignment:
Q  2 aataaagatagttgttgttgtcatt-aaataaaagaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||| || ||||||| ||||||| ||| ||||||||||| |||||||||| ||||||||||| | || || |||||  |||||||||||| || ||||    
T  15508613 aataaaaattgttgttggtgtcattgaaaaaaaagaatttagattatattttgttgttatattgttggtgtcgttgaagtagataatcatggttaattta 15508712  T
Q  100 atttgttataa 110  Q
    |||||||||||    
T  15508713 atttgttataa 15508723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 16039368 - 16039481
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatattttttg-ttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| |||||||||| |||  || ||||||||||||||||||  |||||||| | || | ||||||| |||||||||||  |||||    
T  16039368 taataaagattgttgttggtgtcattaaaaaaataagtatttaaattatatttttttcttatattgttggtgtgattgaaatagataatcatgattagtt 16039467  T
Q  98 taatttgttataat 111  Q
    | ||||||||||||    
T  16039468 tgatttgttataat 16039481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19039848 - 19039957
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttg-ttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| | |||||||| |||||  |||||||||||||||||  |||||||| | || ||||||||| |||||||||||  ||||||     
T  19039848 taataaagattgttgttggtatcattaaaaaaaagg-tttaaattatatttttttattatattgttggtgtcattgaaatagataatcatgattagtttg 19039946  T
Q  100 atttgttataa 110  Q
    |||||||||||    
T  19039947 atttgttataa 19039957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 26403339 - 26403243
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaagaattta-aattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||| ||||||| |||||||||| ||||||||||| | |||  ||||||||||||||| | || | ||||||| | |||||||||||||||||    
T  26403339 ataaagattgttgttggtgtcattaaaaaaaagaatttagatttaatttttttgttatattgttggtgtgattgaaataaataatcatggatagttt 26403243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 28146092 - 28146203
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    ||||||| || ||||||| |||||||||| | ||||||||| ||||||| |||||||||||||  | || ||||||||| | |||||||||  || |||     
T  28146092 taataaatatcgttgttggtgtcattaaaaacaagaatttagattatatatttttgttatattattggtatcattgaaataaataatcatgattaatttg 28146191  T
Q  100 atttgttataat 111  Q
    ||||||||||||    
T  28146192 atttgttataat 28146203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19813937 - 19813842
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa-agaatttaaattatat----tttttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||||||||    |||||||| ||||| | || ||||||||| ||||||||||||    
T  19813937 taataaagattgttgttggtgtcattaaaaaaatagaatttaaattatatattttttttgttttattgttggtgtcattgaaatagataatcatgg 19813842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 24004574 - 24004496
Alignment:
Q  33 aagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||| |||| ||||||||||||||||||||| |  ||||||||||| ||||||||||   |||||| ||||||||||||    
T  24004574 aagattttagattatattttttgttatattgttgatttcattgaaatagataatcataattagtttgatttgttataat 24004496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 33676775 - 33676686
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    |||||||||| ||||||| |||||||||| | ||||||||| ||| | ||||||||||||||| | || ||||||||| | ||||||||||    
T  33676775 taataaagattgttgttggtgtcattaaa-agaagaatttagatttttttttttgttatattgttggtgtcattgaaatatataatcatgg 33676686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9415092 - 9414978
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa---gaatttaaattatattttttg-ttatattgctagtttcattgaaacagataatcatggatagt 96  Q
    ||||||| || ||||||| | |||||||| ||||   ||||||| ||||||||||||| |||||||| | |||||| |  || |||||||||||| ||||    
T  9415092 taataaaaattgttgttggtatcattaaaaaaaataagaatttagattatattttttggttatattgttggtttcactagaaaagataatcatggttagt 9414993  T
Q  97 ttaatttgttataat 111  Q
    || ||||||||||||    
T  9414992 ttgatttgttataat 9414978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 40497611 - 40497512
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaaa-gaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||||| ||||||| ||| |||||| |||  ||||||| ||||||||||||  ||||||||| | |||||||||||| | |||||||||| ||||||    
T  40497611 aataaagattgttgttggtgttattaaaaaaattgaatttagattatattttttttgttatattgttggtttcattgaaatatataatcatggttagttt 40497512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 42949759 - 42949846
Alignment:
Q  6 aagatagttgttgttgtcattaaataaaagaatttaaattata--ttttttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    ||||| ||||||| |||||||||| ||||||||||| ||||||  ||||||||||||||| |  | ||||||||| | ||||||||||    
T  42949759 aagattgttgttggtgtcattaaaaaaaagaatttagattatattttttttgttatattgttgatgtcattgaaatatataatcatgg 42949846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 1397097 - 1397203
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatt 102  Q
    |||||||| ||||||| |||||||||| |||| | | || ||||||||||||||||||||| | ||  | |||||| |||||||||||  ||||||  ||    
T  1397097 ataaagattgttgttggtgtcattaaaaaaaa-attgtagattatattttttgttatattgttggtgacgttgaaatagataatcatgattagttttctt 1397195  T
Q  103 tgttataa 110  Q
    ||||||||    
T  1397196 tgttataa 1397203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13594309 - 13594246
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatat-tttttgttatattg 63  Q
    |||||||||| ||||||| |||||||||| ||||||||||| |||||||  |||||||||||||    
T  13594309 taataaagatcgttgttgatgtcattaaaaaaaagaatttagattatatccttttgttatattg 13594246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 19133439 - 19133530
Alignment:
Q  1 taataaagatagttgttgttgtcattaaata-aaagaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||||||| ||||||| |||||||||| | |||||||||| |||||| |||||||||| |||| | || ||| ||||| |||||||||||    
T  19133439 taataaagattgttgttggtgtcattaaaaataaagaatttatattatatttttttgttaaattgttggtgtcactgaaaaagataatcatg 19133530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 20579399 - 20579336
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataa-aagaatttaaattatattttttgttatattg 63  Q
    |||||||||| ||| ||| |||||||||| || ||||||||| |||||||||||||||||||||    
T  20579399 taataaagattgtttttggtgtcattaaaaaataagaatttagattatattttttgttatattg 20579336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 36205266 - 36205176
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatt-ttttgttatattgctagtttcattgaaacagataatca 88  Q
    ||||||| || ||||||| |||||||||| |||  |||||||| |||||||| ||||||||||||| |  ||||||||||| |||||||||    
T  36205266 taataaatattgttgttggtgtcattaaaaaaataagaatttagattatattcttttgttatattgttgatttcattgaaatagataatca 36205176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 41633685 - 41633795
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaagaatttaaattatattt--tttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||||| | ||||| |||||||||| |||||||||||| || | |||  |||||||||||| | |||| ||| ||| |||||||||||  |||||| |    
T  41633685 ataaagattggtgttggtgtcattaaaaaaaagaatttaatttttttttgttttgttatattgttggttttattaaaatagataatcatgattagtttga 41633784  T
Q  101 tttgttataat 111  Q
    | |||||||||    
T  41633785 tatgttataat 41633795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 35156371 - 35156433
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||| | |||||||||||| ||| |||||||  |||||| ||||||||||||    
T  35156371 ttttttgttatattgttggtttcattgaaatagacaatcatgattagtttgatttgttataat 35156433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 24005140 - 24005033
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||||||| ||||||| |||||||||| |||||| |||| ||| | ||| ||||||||||| | || |||||||||   |||||||||| ||||||      
T  24005140 taataaagatcgttgttggtgtcattaaa-aaaagattttatatttt-tttgttgttatattgttggtgtcattgaaatgaataatcatggttagtttgg 24005043  T
Q  101 tttgttataa 110  Q
    ||||||||||    
T  24005042 tttgttataa 24005033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 35125991 - 35125899
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatt--ttttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    |||||||||| ||||||| ||||||||||  ||||||||||  |||||||  ||||||||||||| | || ||||| ||| |||||| |||||    
T  35125991 taataaagattgttgttggtgtcattaaaataaagaatttaggttatattgtttttgttatattgttggtgtcattaaaatagataagcatgg 35125899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 36802457 - 36802513
Alignment:
Q  55 gttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||| | |||||||||||| ||||||| |||| |||||| ||||||||||||    
T  36802457 gttatattgttggtttcattgaaatagataataatggttagtttgatttgttataat 36802513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 1111142 - 1111226
Alignment:
Q  31 aaaagaatttaaattatatttttt----gttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||| ||||||||| ||||    ||||||||| | || ||||||||| ||||| |||||| |||||| ||||||||||||    
T  1111142 aaaagaattcaaattatatatttttttggttatattgttggtgtcattgaaatagatattcatggttagtttgatttgttataat 1111226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 25915234 - 25915155
Alignment:
Q  33 aagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||| |||||||||||| ||||||||  | ||  |||||||| |||||||||||| |||||| |||| |||||||    
T  25915234 aagaatttagattatatttttttgttatattattggtgccattgaaatagataatcatggttagtttgattttttataat 25915155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 27913141 - 27913200
Alignment:
Q  52 tttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||||||||| | || ||| ||||| |||||||||||| |||||| ||||||||||||    
T  27913141 tttgttatattgttggtgtcactgaaatagataatcatggttagtttgatttgttataat 27913200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37610026 - 37610131
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||||||| |||||||  |||||||| ||||  |||||| |||   ||||||||||||||| | || ||||||||| | |||||||||  |||||| |    
T  37610026 taataaagattgttgttggcgtcattaagtaaat-aatttagatt---ttttttgttatattgatggtgtcattgaaataaataatcatgactagtttga 37610121  T
Q  101 tttgttataa 110  Q
    ||||||||||    
T  37610122 tttgttataa 37610131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 40482834 - 40482893
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttat 108  Q
    |||||| |||||||| | || ||||||||| |||||||||||| ||||||| ||||||||    
T  40482834 ttttttattatattgttggtgtcattgaaatagataatcatggttagtttagtttgttat 40482893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 3357725 - 3357683
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattatatttttt 54  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||    
T  3357725 gttgttggtgtcattaaaaaaaagaatttagattatatttttt 3357683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 9779733 - 9779643
Alignment:
Q  20 tgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    |||||||||| ||||||||||  |||||||||||||||||  || | || ||||||||| |||||| ||| | | ||||  ||||||||||    
T  9779733 tgtcattaaaaaaaagaattttgattatattttttgttattatgttcgtgtcattgaaatagataaacatagttggtttggtttgttataa 9779643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 22881603 - 22881519
Alignment:
Q  31 aaaagaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatgg--atagtttaatttgttataat 111  Q
    ||||||||||| ||||| ||||||  |||| |||| |  ||||||||||| ||||||||||||  ||||||| ||||||||||||    
T  22881603 aaaagaatttagattattttttttttgttaaattgttgatttcattgaaatagataatcatggttatagtttgatttgttataat 22881519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 34753276 - 34753337
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||| |  ||||||||||| |||||||||| | |||||| ||||||||||||    
T  34753276 ttttttgttatattgttgatttcattgaaatagataatcat-gttagtttgatttgttataat 34753337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38692578 - 38692640
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattata-ttttttgttatatt 62  Q
    |||||||||| ||| ||| |||||||||| || |||||||| |||||| ||||||||||||||    
T  38692578 taataaagattgttattggtgtcattaaaaaatagaatttagattatatttttttgttatatt 38692640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42060476 - 42060418
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattat-attttttgtta 58  Q
    ||||||| || ||||||| |||||||||| ||||||||||| ||||| |||||||||||    
T  42060476 taataaaaattgttgttggtgtcattaaaaaaaagaatttagattataattttttgtta 42060418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 4652527 - 4652419
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| ||||| |||| |||| |   || |||||||||||| |||| |||| | || ||||||||| | |||||||||  ||||||     
T  4652527 taataaagattgttgttgatgtcactaaaaaaaaaa---tagattatatttttttgttaaattgttggtgtcattgaaaaaaataatcatgattagtttg 4652431  T
Q  100 atttgttataat 111  Q
    ||||||||||||    
T  4652430 atttgttataat 4652419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 32690051 - 32689990
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||| | || ||||| ||| ||||||| |||| ||||||| ||||||||||    
T  32690051 ttttttgttatattgttggtgtcattaaaatagataattatggttagtttagtttgttataa 32689990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 42060699 - 42060764
Alignment:
Q  45 tatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||||||  | || ||||||||| | |||||||||| ||| || |||||||||||    
T  42060699 tatattttttgttatatttttggtgtcattgaaataaataatcatggttagcttgatttgttataa 42060764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43709579 - 43709465
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa-gaatttaaattatatttt----ttgttatattgctagtttcattgaaacagataatcatggatag 95  Q
    |||||||||| ||||||| | |||||||| |||| ||||||  ||||||||||    ||||| ||||| | || ||||||||| | |||||||||| |||    
T  43709579 taataaagattgttgttggtttcattaaaaaaaaagaatttggattatatttttttgttgttgtattgttggtgtcattgaaataaataatcatggttag 43709480  T
Q  96 tttaatttgttataa 110  Q
    |||| ||| ||||||    
T  43709479 tttagtttattataa 43709465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 13450179 - 13450228
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattatattttttgttatattg 63  Q
    ||||||| ||||||||||  || ||||||| |||||||||||||||||||||    
T  13450179 gttgttgctgtcattaaa--aaggaatttagattatattttttgttatattg 13450228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19064098 - 19064153
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttttt 54  Q
    |||||||||| ||||||  |||||||||| |||  |||||||||||||||||||||    
T  19064098 taataaagattgttgttcgtgtcattaaaaaaataagaatttaaattatatttttt 19064153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 21885368 - 21885273
Alignment:
Q  14 tgttgttgtcattaaataaaagaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatggatagtttaatttgtta 107  Q
    ||||| ||| |||||| ||||||||||| ||| ||||||||  ||||||||| | || | ||||||| | || ||||||| |||||| ||||||||    
T  21885368 tgttggtgttattaaaaaaaagaatttagattgtattttttttgttatattgttggtgttattgaaataaattatcatggttagtttgatttgtta 21885273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24100694 - 24100760
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa---gaatttaaattata-ttttttgttatattg 63  Q
    |||||||||| ||||||| |||||||||| ||||   ||||||| |||||| |||||||||||||||    
T  24100694 taataaagattgttgttggtgtcattaaaaaaaataagaatttagattataattttttgttatattg 24100760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 1e-24; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4550333 - 4550443
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| ||||||||||  ||||||||||||||||| ||||||||||||||| | || |||||||||  ||||||||||| |||||||    
T  4550333 taataaagattgttgttgatgtcattaaaataaagaatttaaattatatttttttgttatattgttggtatcattgaaatcgataatcatggttagttta 4550432  T
Q  100 atttgttataa 110  Q
    |||| ||||||    
T  4550433 atttattataa 4550443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39151814 - 39151922
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||||||| ||||||| ||| |||||| ||||||||||| ||||||||||||||||||||| | || ||||||||| | |||||||||| |||||| |    
T  39151814 taataaagattgttgttggtgttattaaa-aaaagaatttagattatattttttgttatattgttggtgtcattgaaatatataatcatggttagtttga 39151912  T
Q  101 tttgttataa 110  Q
    ||| ||||||    
T  39151913 tttattataa 39151922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 14624580 - 14624467
Alignment:
Q  2 aataaagatagttgttgttgtcattaaa--taaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    ||||||||| ||||||||||||||||||  ||||  |||||||| ||||||||||||||||||||| |||||||||||||| | |||||||||  |||||    
T  14624580 aataaagattgttgttgttgtcattaaaaataaattagaatttagattatattttttgttatattgttagtttcattgaaatatataatcatgattagtt 14624481  T
Q  98 taatttgttataat 111  Q
    | || | |||||||    
T  14624480 tgatctattataat 14624467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 32883153 - 32883263
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    ||||||| || ||| |||||||||||||| | ||||||||| ||||||| |||||||||||||| || | ||||||||| |||||||||||| ||||||     
T  32883153 taataaatattgtttttgttgtcattaaaaataagaatttacattatatatttttgttatattgttaatgtcattgaaatagataatcatggttagtttg 32883252  T
Q  100 atttgttataa 110  Q
     ||||||||||    
T  32883253 gtttgttataa 32883263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25750871 - 25750967
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||||||||||||| ||||| || | ||||||||| |||||||| ||| ||||||    
T  25750871 taataaagattgttgttggtgtcattaaa-aaaagaatttagattatattttttgttttattgttaatgtcattgaaatagataatcgtgggtagttt 25750967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19371748 - 19371859
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttt--tgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| ||||||||||| |||||||||||  |||||||||| | || ||||||||| |||||  ||| | ||||||    
T  19371748 taataaagattgttgttggtgtcattaaaaaaaagaatttagattatattttttctgttatattgttggtgtcattgaaatagatagccatagttagttt 19371847  T
Q  99 aatttgttataa 110  Q
     |||||||||||    
T  19371848 gatttgttataa 19371859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 16683229 - 16683151
Alignment:
Q  33 aagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||| ||||||| |||| |||||||| |||||||||||||| ||||||| |||| |||||| ||||||||||||    
T  16683229 aagaatttagattatatatttttttatattgttagtttcattgaaatagataattatggttagtttgatttgttataat 16683151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 17657465 - 17657387
Alignment:
Q  33 aagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||| ||||||| |||| |||||||| |||||||||||||| ||||||| |||| |||||| ||||||||||||    
T  17657465 aagaatttagattatatatttttttatattgttagtttcattgaaatagataattatggttagtttgatttgttataat 17657387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 21766252 - 21766138
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatggatagt 96  Q
    |||||||||| ||||||| |||||||| | |||  |||||||| |||| |||||||  ||||||||| | |||||||||||| ||| |||||||| ||||    
T  21766252 taataaagattgttgttggtgtcattataaaaataagaatttagattagattttttttgttatattgttggtttcattgaaatagacaatcatggttagt 21766153  T
Q  97 ttaatttgttataat 111  Q
    || ||||||||||||    
T  21766152 ttgatttgttataat 21766138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 19397069 - 19397178
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttt--ttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||| || ||||||| || ||||||| |||  |||||||| ||||||||||  ||||||||||| | |||||||||||| |||||||||||| ||||||    
T  19397069 ataaaaattgttgttggtgccattaaaaaaataagaatttagattatattttttttgttatattgttggtttcattgaaatagataatcatggttagttt 19397168  T
Q  99 aatttgttat 108  Q
     |||||||||    
T  19397169 gatttgttat 19397178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 47297420 - 47297518
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    ||||||||||  |||||| |||||||||| |||||||||||||||||| |||||| |||||||| | || ||||||||| |||||||||||  |||||||    
T  47297420 taataaagatttttgttgatgtcattaaa-aaaagaatttaaattatatttttttattatattgttggtgtcattgaaatagataatcatgattagttta 47297518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1786979 - 1787089
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    ||||||| || ||||||| |||||||||| ||||||||||| ||||||| | ||| |||||||| |||| |||||  || | |||||||||| ||||||     
T  1786979 taataaaaattgttgttggtgtcattaaaaaaaagaatttagattatatatattttttatattgttagtgtcattagaataaataatcatggttagtttg 1787078  T
Q  100 atttgttataa 110  Q
    |||||||||||    
T  1787079 atttgttataa 1787089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 38175115 - 38175037
Alignment:
Q  33 aagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||| |||||| ||||||||||||||   |||||||||||| |||||||||||  |||||| ||||||||||||    
T  38175115 aagaatttagattataatttttgttatattgtcggtttcattgaaatagataatcatgattagtttgatttgttataat 38175037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 39434958 - 39435055
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| ||||||||||| |||||| |||||||||| |||| | || ||||||||| |||||||| ||| ||||||    
T  39434958 taataaagattgttgttggtgtcattaaa-aaaagaatttagattatatttttttgttacattgtttgtgtcattgaaatagataatcttggttagttt 39435055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 45000992 - 45000879
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| ||||| |||| |||  | |||||| |||||||||||| ||||||||| |  ||||||||||| |||||||||||| |||||    
T  45000992 taataaagattgttgttgatgtcaataaaaaaataaaaatttagattatatttttttgttatattgttgttttcattgaaatagataatcatggttagtt 45000893  T
Q  98 taatttgttataat 111  Q
    | | ||||||||||    
T  45000892 tcaattgttataat 45000879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 4998212 - 4998326
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataa--aagaatttaaattatat--tttttgttatattgctagtttcattgaaacagataatcatggatagt 96  Q
    ||||||| || |||| || |||||||||| ||  ||||| |||||||||||  ||||| |||||||| | || ||||||||| |||||||||||| ||||    
T  4998212 taataaaaattgttgctggtgtcattaaaaaattaagaacttaaattatatattttttcttatattgttggtgtcattgaaatagataatcatggttagt 4998311  T
Q  97 ttaatttgttataat 111  Q
    || ||||||||||||    
T  4998312 ttgatttgttataat 4998326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 46759630 - 46759550
Alignment:
Q  31 aaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||| |||||||||||| ||||||||| | || | ||||||| |||||||||||| |||||| |||||||||||    
T  46759630 aaaagaatttagattatatttttttgttatattgttggtgtaattgaaatagataatcatggttagtttgatttgttataa 46759550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 20055708 - 20055767
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttat 108  Q
    ||||||||||||||| |||| ||||||||| |||||||||||| |||||| |||||||||    
T  20055708 ttttttgttatattgttagtgtcattgaaatagataatcatggttagtttgatttgttat 20055767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 23774923 - 23774830
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa---gaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||||||| ||||||| | |||||||||||||   ||||||||| |||||||||| ||||||||| | || ||||||||| |||||||||||    
T  23774923 taataaagattgttgttggtatcattaaataaaataagaatttaaaatatatttttttgttatattgttggtgtcattgaaatagataatcatg 23774830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2475107 - 2475017
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattat-attttttgttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||| ||||||||| |||||| | ||  |||||||| | |||||||||    
T  2475107 taataaagatcgttgttggtgtcattaaaaaaaagaatttagattataattttttgtaatattgttggtgccattgaaataaataatcatg 2475017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 39389541 - 39389656
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa---gaatttaaattatatttt--ttgttatattgctagtttcattgaaacagataatcatggatag 95  Q
    |||||||||| ||||||  |||||||||| ||||   ||||||| ||||||||||  ||||||||||| | ||||||||||||  ||||||||||| ||     
T  39389541 taataaagattgttgtttgtgtcattaaaaaaaataagaatttagattatattttttttgttatattgttggtttcattgaaatggataatcatggttaa 39389640  T
Q  96 tttaatttgttataat 111  Q
    ||| ||||| ||||||    
T  39389641 tttgatttgatataat 39389656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7525835 - 7525947
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa-gaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| |||||||||| |||| ||||||| |||||| |||||  |||||||||| | | ||||||||| | |||||||||  |||||    
T  7525835 taataaagatcgttgttggtgtcattaaaaaaaaagaatttagattatactttttatgttatattgccaatgtcattgaaataaataatcatgattagtt 7525934  T
Q  98 taatttgttataa 110  Q
     | ||||||||||    
T  7525935 gagtttgttataa 7525947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20055635 - 20055688
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt 54  Q
    |||||||||| ||||||  |||||||||| ||||||||||||||||||||||||    
T  20055635 taataaagattgttgttagtgtcattaaaaaaaagaatttaaattatatttttt 20055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 8790855 - 8790935
Alignment:
Q  31 aaaagaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||| |||||| ||||||||||||||| |  | |||||| || |||||||||||| |||||| |||||||||||    
T  8790855 aaaagaatttatattatacttttttgttatattgttgatgtcattggaatagataatcatggttagtttgatttgttataa 8790935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 7415840 - 7415953
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaaa---gaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    ||||||||| | ||||| |||||||||| ||||   ||||| | |||||||||| ||||||||||| |  | ||||||||| |||||||||||| |||||    
T  7415840 aataaagattgatgttggtgtcattaaacaaaataagaattcagattatatttttttgttatattgtttatgtcattgaaatagataatcatggttagtt 7415939  T
Q  98 taatttgttataat 111  Q
    | || |||||||||    
T  7415940 tgatctgttataat 7415953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 10040433 - 10040524
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    |||||||||| |||||||  ||||||||| ||||||||||| |||||| |||||| ||||| || | || ||||||||| ||| ||||||||    
T  10040433 taataaagattgttgttggcgtcattaaaaaaaagaatttagattatatttttttattatactgttggtgtcattgaaatagaaaatcatgg 10040524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 36609885 - 36609798
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||||||| ||||||| |||||||||| ||||     || ||||||||||||  ||||||||||| |||||||||||| |||||||||||    
T  36609885 taataaagattgttgttggtgtcattaaaaaaaaa----tagattatattttttttgttatattgctggtttcattgaaatagataatcatg 36609798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 372665 - 372751
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa-gaatttaaattatattttttgttatattgctagtttcattgaaacagataat 86  Q
    |||| ||||| ||||||| | |||||||| |||| ||||||| ||||||||||||||||||||| | || ||||||||  |||||||    
T  372665 taatgaagattgttgttgatatcattaaaaaaaatgaatttagattatattttttgttatattgttggtgtcattgaattagataat 372751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 7629114 - 7629037
Alignment:
Q  33 aagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||| ||||| ||||||||||||||| || |  |||||||| |||||||||||  |||||| ||||||||||||    
T  7629114 aagaatttagattat-ttttttgttatattgttactaccattgaaatagataatcatgattagtttgatttgttataat 7629037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15470839 - 15470951
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt---gttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| ||||||||||  |||||||| ||||||||||||||   ||||||||| | || | |||| ||   |||||||||  |||||    
T  15470839 taataaagatcgttgttggtgtcattaaaacaaagaattaaaattatatttttttttgttatattgttggtgttattgcaatgaataatcatgattagtt 15470938  T
Q  98 taatttgttataa 110  Q
    | |||||||||||    
T  15470939 tgatttgttataa 15470951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 37310327 - 37310389
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||| | |||||||||||| | |||| ||||| |||||| ||||||||||||    
T  37310327 ttttttgttatattgtttgtttcattgaaataaataaccatggttagtttgatttgttataat 37310389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 8801601 - 8801662
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||| | || ||||||||| |||||||||||| ||||||  ||||||||||    
T  8801601 ttttttgttatattgttggtgtcattgaaatagataatcatggttagtttggtttgttataa 8801662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 23050890 - 23050978
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||||||| ||||||  |||||||||| ||||||||||| ||| | ||||||||||||||| | || | ||||||| | |||||||||    
T  23050890 taataaagattgttgtttgtgtcattaaaaaaaagaatttagatt-ttttttttgttatattgttggtgttattgaaataaataatcatg 23050978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 25834580 - 25834632
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt 54  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||||||||||    
T  25834580 taataaagattgttgttgatgtcattaaa-aaaagaatttagattatatttttt 25834632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 38598593 - 38598485
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    ||||||||||  |||||  |||||||||| ||||||||||| |||||||||||| ||||||||  | || ||||||||| ||||||| |||  ||||||     
T  38598593 taataaagatgtttgttagtgtcattaaa-aaaagaatttagattatatttttttgttatattattggtgtcattgaaatagataataatgattagtttt 38598495  T
Q  100 atttgttata 109  Q
     |||||||||    
T  38598494 gtttgttata 38598485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 46622425 - 46622333
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| |||     ||| ||| ||||||||||||||||| |  | ||||||||| |||||||||||| ||||||    
T  46622425 taataaagattgttgttggtgtcattaaaaaaa-----ttagattgtattttttgttatattgttgatgtcattgaaatagataatcatggttagttt 46622333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 48109678 - 48109738
Alignment:
Q  26 taaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatc 87  Q
    |||| |||||||| ||||||||||||| |||||||||| || ||||||||||| ||||||||    
T  48109678 taaaaaaaagaatataaattatatttt-tgttatattgttaatttcattgaaatagataatc 48109738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 5800774 - 5800853
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaa 78  Q
    |||||||||| |||| || | |||||||| |||  |||||||| ||||| ||||||||||||||| | ||||||||||||    
T  5800774 taataaagatcgttggtggtatcattaaaaaaataagaatttagattattttttttgttatattgtttgtttcattgaaa 5800853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 32297924 - 32297844
Alignment:
Q  31 aaaagaatttaaattatatt-ttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||| |||||||||| ||||||||||||| |  | |||||||||  ||||||||||| |||||| |||| ||||||    
T  32297924 aaaagaattcaaattatattgttttgttatattgttgctgtcattgaaattgataatcatggttagtttgatttattataa 32297844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 41556378 - 41556310
Alignment:
Q  31 aaaagaatttaaattatattttttgttata-ttgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||||||| |||||||||||||||||| ||| | || ||||||||| ||| |||||||| ||||||    
T  41556378 aaaagaatttagattatattttttgttatatttgttggtgtcattgaaatagacaatcatggttagttt 41556310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 1748270 - 1748203
Alignment:
Q  43 attatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||||||| | |||| ||| ||||| ||||||| |||| ||||||  ||||||||||    
T  1748270 attatattttttgttatatcgttagtgtcactgaaatagataataatggttagtttgttttgttataa 1748203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 42963317 - 42963238
Alignment:
Q  33 aagaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||| ||||||| ||||||||||| || |  ||| ||||||| ||||||| |||| |||||| ||||||||||||    
T  42963317 aagaatttagattatatatttttgttatagtgttgatttaattgaaatagataattatggttagtttgatttgttataat 42963238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 109
Target Start/End: Complemental strand, 46671149 - 46671074
Alignment:
Q  34 agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttata 109  Q
    |||||| | ||||||||||||||||||||| |  ||||||||||| | ||| |||| | ||||||||||| |||||    
T  46671149 agaattgagattatattttttgttatattgttgatttcattgaaatatatattcatagttagtttaatttattata 46671074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9412687 - 9412796
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||  |||| ||||| |||||||| || |||||||||| ||||||||||  | || ||||| ||| |||||||||||| || |||     
T  9412687 taataaagattgttgttagtgtcgttaaa-aaaagaatatagattatatttttttgttatattcttggtgtcattaaaatagataatcatggttaatttg 9412785  T
Q  100 atttgttataa 110  Q
     ||||||||||    
T  9412786 gtttgttataa 9412796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 107
Target Start/End: Complemental strand, 19008406 - 19008348
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgtta 107  Q
    ||||||||||||||| | || ||||||||| |||||| ||||| ||||||| |||||||    
T  19008406 ttttttgttatattgttggtgtcattgaaatagataaacatggttagtttattttgtta 19008348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 24060135 - 24060077
Alignment:
Q  27 aaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataa 85  Q
    ||||| ||||||||| ||||||||||||||||| ||| | || ||||||||| ||||||    
T  24060135 aaatataagaatttatattatattttttgttattttgttggtatcattgaaatagataa 24060077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 39465850 - 39465965
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttt---ttgttatattgctagtttcattgaaacagataatcatggatag 95  Q
    ||||||| || ||||||| |||||||| | |||  |||||||| ||| ||||||   || |||||||| | || | ||||||| |||||||||||| |||    
T  39465850 taataaaaattgttgttggtgtcattacaaaaataagaatttatattttattttattttattatattgttggtgtgattgaaatagataatcatggttag 39465949  T
Q  96 tttaatttgttataat 111  Q
    |||| |||||||||||    
T  39465950 tttagtttgttataat 39465965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 23896729 - 23896774
Alignment:
Q  45 tatattttttgttatattgctagtttcattgaaacagataatcatg 90  Q
    ||||||||||||||||||||| || ||||||||| |||||| ||||    
T  23896729 tatattttttgttatattgctggtgtcattgaaatagataaccatg 23896774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 27509715 - 27509775
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||| |||| ||||||||| ||||||| |||| ||||||  ||||||||||    
T  27509715 ttttttgttatattgttagtgtcattgaaatagataat-atggttagtttggtttgttataa 27509775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48110321 - 48110268
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt 54  Q
    |||||||||| ||||||| | ||| |||| ||||||||||| ||||||||||||    
T  48110321 taataaagatcgttgttggtttcactaaacaaaagaatttatattatatttttt 48110268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 5319355 - 5319403
Alignment:
Q  41 aaattatattttttgttatattgctagtttcattgaaacagataatcat 89  Q
    ||||||||||||||||||||||  | || ||||||||| ||||||||||    
T  5319355 aaattatattttttgttatattattggtgtcattgaaatagataatcat 5319403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 5757299 - 5757236
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttt-ttgttatattg 63  Q
    |||||||| | ||||| |||||||||| |||  ||||||||||||||||||| |||||||||||    
T  5757299 ataaagattggtgttggtgtcattaaaaaaataagaatttaaattatattttgttgttatattg 5757236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 20149454 - 20149410
Alignment:
Q  67 gtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||||||||| |||||||||| | |||||| ||||||||||||    
T  20149454 gtttcattgaaatagataatcattgttagtttgatttgttataat 20149410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 4e-24; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39670184 - 39670291
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    ||||||||||  |||||||| |||||||| ||||||||||||||||||||||||||||||||| | || ||||||||| |||||||||||| ||| |||     
T  39670184 taataaagatttttgttgttatcattaaa-aaaagaatttaaattatattttttgttatattgttggtgtcattgaaatagataatcatggttag-ttag 39670281  T
Q  101 tttgttataa 110  Q
    ||||||||||    
T  39670282 tttgttataa 39670291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 549024 - 549133
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||||||| ||||||| ||||||||||  |||||||||| |||||||||||| || ||||  | || ||||||||| |||||||||||| |||||| |    
T  549024 taataaagattgttgttgatgtcattaaaataaagaatttagattatattttttattgtattcttggtatcattgaaatagataatcatggttagtttga 549123  T
Q  101 tttgttataa 110  Q
    ||||||||||    
T  549124 tttgttataa 549133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 26878662 - 26878555
Alignment:
Q  5 aaagatagttgttgttgtcattaaataaaagaatttaaattatattttttg-ttatattgctagtttcattgaaacagataatcatggatagtttaattt 103  Q
    |||||| ||||||| |||||||| | ||||||||||| ||||||||||||  |||||||| |||| ||||||||| |||||||||||| ||||||  |||    
T  26878662 aaagattgttgttggtgtcattacaaaaaagaatttatattatatttttttattatattgttagtgtcattgaaatagataatcatggttagtttggttt 26878563  T
Q  104 gttataat 111  Q
    ||||||||    
T  26878562 gttataat 26878555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 35034861 - 35034748
Alignment:
Q  1 taataaagatagttgttgttgtcatt---aaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| |||||||||||||||   ||| ||||||||||| |||||||||||| |||||| | | |||||||||||| ||||| |||||| || ||    
T  35034861 taataaagattgttgttgttgtcattgaaaaaaaaaagaatttagattatattttttcttatatcgttggtttcattgaaatagatattcatggttaatt 35034762  T
Q  98 taatttgttataat 111  Q
    | ||||||||||||    
T  35034761 tgatttgttataat 35034748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 7059383 - 7059487
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||| ||||| |||  |||||||| ||||||||||||||||||||| | |||||||||||| |||||||||| | ||||||    
T  7059383 taataaagattgttgttggtgtcgttaaaaaaataagaatttagattatattttttgttatattgttggtttcattgaaatagataatcatagttagttt 7059482  T
Q  99 aattt 103  Q
     ||||    
T  7059483 gattt 7059487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 13781502 - 13781609
Alignment:
Q  4 taaagatagttgttgttgtcattaaataaaagaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagtttaatt 102  Q
    |||||||  |||||| |||||||| | ||||||||||| ||||||| |||||||||||||| | || ||||||||| |||||||||||  |||||| |||    
T  13781502 taaagattattgttggtgtcattataaaaaagaatttagattatatatttttgttatattgttggtgtcattgaaatagataatcatgattagtttgatt 13781601  T
Q  103 tgttataa 110  Q
    ||||||||    
T  13781602 tgttataa 13781609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 27376379 - 27376281
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattat-attttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||| |||||||||||||||| | |  ||||||||| |||| ||||||| ||||||    
T  27376379 taataaagattgttgttggtgtcattaaaaaaaagaatttagattataattttttgttatattgttggagtcattgaaatagatgatcatggttagttt 27376281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 46620679 - 46620566
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| |||||||||| |||  |||||||| ||||||| |||||||||||||  | |||||||||||| |||||||||||  |||||    
T  46620679 taataaagattgttgttggtgtcattaaaaaaataagaatttagattatatatttttgttatatttttggtttcattgaaatagataatcatgattagtt 46620580  T
Q  98 taatttgttataat 111  Q
    | ||||| ||||||    
T  46620579 tgatttgctataat 46620566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 1580068 - 1579972
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| ||| ||||||||||| ||||||||||| ||||  | || ||||||||| |||||||||||| ||||||    
T  1580068 taataaagattgttgttgatgtcattaaa-aaatgaatttaaattgtattttttgttgtattatttgtgtcattgaaatagataatcatggttagttt 1579972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 30503154 - 30503265
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||| | |||  |||||||| ||||||||| || |||||||| | |||||||||||| |||||||||||| || |||    
T  30503154 taataaagattgttgttggtgtcattacaaaaataagaatttagattatatttatt-ttatattgttggtttcattgaaatagataatcatggttaattt 30503252  T
Q  99 aatttgttataat 111  Q
     ||||||||||||    
T  30503253 gatttgttataat 30503265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 37830960 - 37831071
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgt--tatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||| |||| ||||||| | |||||||| ||||||||||| |||||||||||| |  ||||||| |||||||||||||| |||||||||||  ||||||    
T  37830960 taatagagattgttgttgatatcattaaa-aaaagaatttagattatattttttttattatattgttagtttcattgaaatagataatcatgattagttt 37831058  T
Q  99 aatttgttataat 111  Q
     | ||||||||||    
T  37831059 gagttgttataat 37831071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 49320502 - 49320423
Alignment:
Q  33 aagaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||||||| ||||| |||||| |||||||| |||| ||||||||| |||||||||||| |||||| ||||||||||||    
T  49320502 aagaatttaagttataattttttcttatattgttagtgtcattgaaatagataatcatggttagtttgatttgttataat 49320423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 160852 - 160941
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    |||||||||| ||||||| |||||||||| ||||  ||| | ||||||||||||||||||||| | || ||||||||| ||||||||||||    
T  160852 taataaagattgttgttggtgtcattaaaaaaaaatatt-atattatattttttgttatattgttggtgtcattgaaatagataatcatgg 160941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5720460 - 5720350
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattt-tttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||  |||||||||  |||| |||||| ||||||| | ||| |||||||| |||| ||||||||| |||||||||| | ||||||     
T  5720460 taataaagattgttgttagtgtcattaagaaaaataatttagattatatatattttttatattgatagtgtcattgaaatagataatcatagttagtttt 5720361  T
Q  100 atttgttataa 110  Q
    |||||||||||    
T  5720360 atttgttataa 5720350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 554771 - 554659
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaa--agaatttaaattatatt-ttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||||| | ||||| |||||||||| |||  ||||||||||||||||| |||| |||||||| | || ||||||||| |||| ||||||| ||||||    
T  554771 aataaagattggtgttgatgtcattaaaaaaataagaatttaaattatatttttttcttatattgttggtgtcattgaaatagatgatcatggttagttt 554672  T
Q  99 aatttgttataat 111  Q
     |||| |||||||    
T  554671 gatttattataat 554659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 1363749 - 1363840
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    ||||||||| | ||||| |||||||||| |||  |||||||  ||||||||||||||||||||| | |||||||||||| | ||||||||||    
T  1363749 aataaagattggtgttggtgtcattaaacaaattagaattttgattatattttttgttatattgttggtttcattgaaatatataatcatgg 1363840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 4951561 - 4951648
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    |||||||| ||||||| |||||||||| |||| |||| | ||||||||||||||||||||| | || ||||| ||| ||||||||||||    
T  4951561 ataaagattgttgttggtgtcattaaaaaaaaaaatt-agattatattttttgttatattgttggtatcatttaaatagataatcatgg 4951648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 111
Target Start/End: Original strand, 17688089 - 17688169
Alignment:
Q  31 aaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||| ||||||||||||||||||||| | || ||||||||| |||||||  ||| ||||||  |||||||||||    
T  17688089 aaaagaatttagattatattttttgttatattgttggtgtcattgaaatagataattttggttagttttgtttgttataat 17688169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 20702379 - 20702492
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattata----ttttttgttatattgctagtttcattgaaacagataatcatggatagt 96  Q
    |||||||||| ||||||| ||||||| || ||||||||||| ||||||    ||||||||||||||| | || ||||||||| | |||||||||  ||||    
T  20702379 taataaagatcgttgttggtgtcattgaaaaaaagaatttagattatattttttttttgttatattgttggtgtcattgaaataaataatcatgattagt 20702478  T
Q  97 ttaatttgttataa 110  Q
    ||  ||||||||||    
T  20702479 ttggtttgttataa 20702492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 50561264 - 50561177
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa--gaatttaaattatattttttgttatattgctagtttcattgaaacagataat 86  Q
    ||||||| || ||||||| |||||||||| |||   ||||||||||||||||||||||||||||| | || ||||||||| |||||||    
T  50561264 taataaaaattgttgttggtgtcattaaaaaaatatgaatttaaattatattttttgttatattgttggtgtcattgaaatagataat 50561177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 25458869 - 25458973
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattt-tttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||| ||| |||||||||| ||||    ||| ||||||||| |||||||||||| | |||||||||||| | |||||||||| ||||||     
T  25458869 taataaagattgtttttggtgtcattaaaaaaaa----ttagattatatttgtttgttatattgttggtttcattgaaaaatataatcatggttagtttg 25458964  T
Q  100 atttgttat 108  Q
    |||||||||    
T  25458965 atttgttat 25458973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 52954114 - 52954225
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa-gaatttaaattatattttt-tgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| |||| ||||||| ||||||| ||| | ||| |||| | || ||||||||| |||||||||||| ||||||    
T  52954114 taataaagattgttgttggtgtcattaaaaaaaaagaatttatattatatatttctattagattgttcgtgtcattgaaatagataatcatggttagttt 52954213  T
Q  99 aatttgttataa 110  Q
      ||||||||||    
T  52954214 tgtttgttataa 52954225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 13860466 - 13860404
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||| | |||||||||||| | |||||||||| |||||| ||||||||||||    
T  13860466 ttttttgttatattgtttgtttcattgaaataaataatcatggttagtttgatttgttataat 13860404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 26054504 - 26054411
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||||||  |||||| |||||||||| ||||    ||| |||||||||||||| |||||| |||| ||||||||| ||||||| |||| ||||||    
T  26054504 taataaagatttttgttggtgtcattaaaaaaaa----ttagattatattttttgtcatattgttagtgtcattgaaatagataatgatggttagttt 26054411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 2768875 - 2768800
Alignment:
Q  36 aatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    |||||| |||||||||||| ||||||||| || |||| |||||| ||||||||| || |||||| |||||||||||    
T  2768875 aatttagattatatttttttgttatattgttattttctttgaaatagataatcagggttagtttgatttgttataa 2768800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 19442766 - 19442670
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||| || ||||||| |||||||||| ||||  ||||| | ||||| |||||||||||||| | || ||||||||| |||||||||||| ||||||    
T  19442766 taataaaaattgttgttggtgtcattaaaaaaaa--atttagaatatatatttttgttatattgttggtgtcattgaaatagataatcatggttagttt 19442670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 36927004 - 36927109
Alignment:
Q  7 agatagttgttgttgtcattaaataaaagaatttaaattatattttttgtt--atattgctagtttcattgaaacagataatcatggatagtttaatttg 104  Q
    |||| ||||||| |||||||||| ||||||||||| ||||||| |||| ||  |||||| | || ||||| ||| | |||||||||| ||||| ||||||    
T  36927004 agattgttgttggtgtcattaaaaaaaagaatttagattatatatttttttgcatattg-ttgtgtcattaaaatatataatcatggttagttgaatttg 36927102  T
Q  105 ttataat 111  Q
    |||||||    
T  36927103 ttataat 36927109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 48736871 - 48736820
Alignment:
Q  43 attatattttttgttatattgctagtttcattgaaacagataatcatggata 94  Q
    ||||| ||||||||||||||| | |||||||||||| |||||||||||||||    
T  48736871 attattttttttgttatattgttggtttcattgaaatagataatcatggata 48736820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 48737165 - 48737114
Alignment:
Q  43 attatattttttgttatattgctagtttcattgaaacagataatcatggata 94  Q
    ||||| ||||||||||||||| | |||||||||||| |||||||||||||||    
T  48737165 attattttttttgttatattgttggtttcattgaaatagataatcatggata 48737114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Complemental strand, 48737459 - 48737408
Alignment:
Q  43 attatattttttgttatattgctagtttcattgaaacagataatcatggata 94  Q
    ||||| ||||||||||||||| | |||||||||||| |||||||||||||||    
T  48737459 attattttttttgttatattgttggtttcattgaaatagataatcatggata 48737408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 6196667 - 6196754
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataa--aagaatttaaattatat---tttttgttatattgctagtttcattgaaacagat 83  Q
    |||||||||| ||||||| |||||||||| ||  |||||||||||||||||   |||||||||||||| | || ||||||||| ||||    
T  6196667 taataaagattgttgttggtgtcattaaaaaagtaagaatttaaattatatatgtttttgttatattgttggtgtcattgaaatagat 6196754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 26510290 - 26510177
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataa-aagaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    ||||||||||| || ||| || ||||||| || ||||||||| ||||||||||||  ||||||||| |  | | ||||||| ||| |||||| | |||||    
T  26510290 taataaagatatttcttggtgacattaaaaaataagaatttagattatattttttttgttatattgttgttgttattgaaatagaaaatcattgttagtt 26510191  T
Q  98 taatttgttataat 111  Q
    ||||||||||||||    
T  26510190 taatttgttataat 26510177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 893977 - 894057
Alignment:
Q  33 aagaatttaaattatatttt--ttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||||||||  ||||||||||| | ||  || ||||| || ||||||||| |||||| ||||||||||||    
T  893977 aagaatttaaattatattttttttgttatattgttggtgccactgaaatagttaatcatggttagtttgatttgttataat 894057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 2358709 - 2358770
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||| | |  ||||||||| ||||||||||||  |||||||||||||||||    
T  2358709 ttttttgttatattgtttgagtcattgaaatagataatcatggtcagtttaatttgttataa 2358770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 35519120 - 35519196
Alignment:
Q  33 aagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||| |||| ||||||||| || || ||||||||| |||||||||||  ||||||  ||||||||||    
T  35519120 aagaatttaaattat-ttttctgttatattactggtgtcattgaaatagataatcatgattagtttggtttgttataa 35519196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 109
Target Start/End: Complemental strand, 37143788 - 37143728
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttata 109  Q
    ||||||||||||||| | |||||||||||| ||| |||||| | |||||| ||||||||||    
T  37143788 ttttttgttatattgttggtttcattgaaatagacaatcatagttagtttgatttgttata 37143728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 2133562 - 2133672
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataa--aagaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| |||| ||||| ||  ||||||||| ||||| |||| ||||||||||| | || | ||||||| |||||||||||| | |||    
T  2133562 taataaagattgttgttggtgtcgttaaaaaattaagaatttagattatgtttttttgttatattgttggtgtgattgaaatagataatcatggttggtt 2133661  T
Q  98 taatttgttat 108  Q
    | |||| ||||    
T  2133662 tgatttattat 2133672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 20964791 - 20964833
Alignment:
Q  20 tgtcattaaataaaagaatttaaattatattttttgttatattg 63  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  20964791 tgtcattaaa-aaaagaatttagattatattttttgttatattg 20964833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35595648 - 35595541
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatt--ttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||  |||||||||| ||||    ||| ||||||||  ||||||||||||| | || ||||||||| |||||||||||  ||||||    
T  35595648 taataaagattgttgttagtgtcattaaaaaaaa----ttagattatattatttttgttatattgtttgtatcattgaaatagataatcatgattagttt 35595553  T
Q  99 aatttgttataa 110  Q
      ||||||||||    
T  35595552 ggtttgttataa 35595541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 56085166 - 56085083
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatc 87  Q
    |||||||||| ||||||| |||||||||| |||| |  |||||||||||||||| |||||||| | || ||||||||| ||| ||||    
T  56085166 taataaagattgttgttggtgtcattaaaaaaaaaa--ttaaattatatttttt-ttatattgttggtgtcattgaaatagacaatc 56085083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 594575 - 594524
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt 54  Q
    |||||||||| ||||||| ||||||||||  ||| |||||||||||||||||||    
T  594575 taataaagattgttgttgatgtcattaaa--aaataatttaaattatatttttt 594524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 7438249 - 7438187
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||||||| |||| | |||||||||||| |||||||||||  || ||| ||||||||||||    
T  7438249 ttttttgttaaattgtttgtttcattgaaatagataatcatgattaatttgatttgttataat 7438187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 30048100 - 30048154
Alignment:
Q  36 aatttaaattatattttttgttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||| ||||||||||||||||||||  | || ||||||||| |||||||||||    
T  30048100 aatttagattatattttttgttatatttttggtgtcattgaaaaagataatcatg 30048154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 30062441 - 30062495
Alignment:
Q  36 aatttaaattatattttttgttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||| ||||||||||||||||||||  | || ||||||||| |||||||||||    
T  30062441 aatttagattatattttttgttatatttttggtgtcattgaaaaagataatcatg 30062495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 49574905 - 49575013
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttt--ttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| ||||    ||| ||||||||||  ||||||||||| | || ||||||||| | |||||||||  ||||||    
T  49574905 taataaagatcgttgttggtgtcattaaaaaaaaa---ttagattatattttttttgttatattgttggtgtcattgaaataaataatcatgattagttt 49575001  T
Q  99 aatttgttataa 110  Q
      ||||||||||    
T  49575002 ggtttgttataa 49575013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 7712668 - 7712729
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||| | || ||||||||| |||||||||||  ||||||  ||||||||||    
T  7712668 ttttttgttatattgttggtgtcattgaaatagataatcatgattagtttggtttgttataa 7712729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 18417228 - 18417167
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||  |||| ||||||||| ||| ||| |||| |||||| |||||||||||    
T  18417228 ttttttgttatatttttagtgtcattgaaatagacaatgatggttagtttgatttgttataa 18417167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 26427121 - 26427060
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||| ||||  |||||||| |||||||||||| | |||| |||| ||||||    
T  26427121 ttttttgttatattgttagtgccattgaaatagataatcatggtttgtttgatttattataa 26427060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 2291090 - 2291004
Alignment:
Q  5 aaagatagttgttgttgtcattaaataaaagaatttaaattatat--tttttgttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||| ||||||| |||||||||| |||| ||| || |||||||  |||||||||||||| | || ||||||||| ||||| |||||    
T  2291090 aaagattgttgttgatgtcattaaaaaaaa-aatgtagattatatgttttttgttatattgttggtgtcattgaaatagatagtcatg 2291004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 27551064 - 27551000
Alignment:
Q  47 tattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||||||||| ||||   |||||||||||| |||||||||||  || ||| ||||||||||||    
T  27551064 tattttttgttaaattgtctgtttcattgaaatagataatcatgattaatttgatttgttataat 27551000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 6e-23; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 17579957 - 17579846
Alignment:
Q  1 taataaagatagttgttgttgtcattaaata-aaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||||||||| | |||||||||| |||||||||||||||| |||| |||| ||||||||| |||||||| ||  |||||||    
T  17579957 taataaagattgttgttgatgtcattaaaaagaaagaatttagattatattttttgttaaattgttagtgtcattgaaatagataatcgtgattagttta 17579858  T
Q  100 atttgttataat 111  Q
     |||||||||||    
T  17579857 gtttgttataat 17579846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45943314 - 45943426
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa--gaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||  |||||||||| ||||  |||||||||||||||||| ||||||||||| | |||||||||||| |||||||||||| |||||    
T  45943314 taataaagattgttgttagtgtcattaaaaaaaaaagaatttaaattatatttttttgttatattgttggtttcattgaaatagataatcatggttagtt 45943413  T
Q  98 taatttgttataa 110  Q
    |  ||||||||||    
T  45943414 tgctttgttataa 45943426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 27926465 - 27926572
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaagaatttaaattatattt-tttgttatattgctagtttcattgaaacagataatcatggatagtttaat 101  Q
    |||||||||||||||| |||||||||| ||||||| ||| ||||||||| |||||||||||| | || ||||||||| | |||||||||| |||||| ||    
T  27926465 ataaagatagttgttggtgtcattaaa-aaaagaacttagattatatttctttgttatattgttggtgtcattgaaatatataatcatggttagtttgat 27926563  T
Q  102 ttgttataa 110  Q
    |||||||||    
T  27926564 ttgttataa 27926572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 24561250 - 24561363
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| |||||||||| |||  |||||||||||||||| |||||||||||||| | |||||||||||| |||||||||    |||||    
T  24561250 taataaagattgttgttggtgtcattaaaaaaataagaatttaaattatatatttttgttatattgttggtttcattgaaatagataatcacaattagtt 24561349  T
Q  98 taatttgttataat 111  Q
    | ||||||||||||    
T  24561350 tgatttgttataat 24561363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 35547222 - 35547109
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    ||||||| || ||||||| |||||||||| |||  | ||| ||||||||||||||| ||||||| | |||||||||||||| |||||||||||  |||||    
T  35547222 taataaaaattgttgttggtgtcattaaaaaaataaaaatgtaaattatatttttttgttatatcgttagtttcattgaaatagataatcatgattagtt 35547123  T
Q  98 taatttgttataat 111  Q
    ||||||||||||||    
T  35547122 taatttgttataat 35547109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 25822177 - 25822066
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa-gaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| || |||| |||||||||| |||| ||||||| ||||||||||||||||||||| | || || |||||| |||||||||| | ||||||     
T  25822177 taataaagattgtcgttggtgtcattaaacaaaaagaatttacattatattttttgttatattgttggtgtcgttgaaatagataatcattgttagtttg 25822078  T
Q  100 atttgttataat 111  Q
     |||||||||||    
T  25822077 gtttgttataat 25822066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 34748854 - 34748953
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||| |||||||||| ||||||||||| |||||| |||||||||||||||   || ||||||||| |||||||||||| |||||| |||| ||||||    
T  34748854 gttgttggtgtcattaaaaaaaagaatttagattatatttttttgttatattgtcggtgtcattgaaatagataatcatggttagtttcatttattataa 34748953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 46880084 - 46880194
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||||||||| ||||||||||| |||||| ||||||| ||||||| | || || |||||| | |||||||||| ||||||     
T  46880084 taataaagattgttgttggtgtcattaaaaaaaagaatttagattatatttttttgatatattgttggtgtcgttgaaatacataatcatggttagtttg 46880183  T
Q  100 atttgttataa 110  Q
     ||||||||||    
T  46880184 gtttgttataa 46880194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 115927 - 115818
Alignment:
Q  1 taataaagatagttgttgttgtcattaaata-aaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| | |||||||||| |||||||||||| ||||||||| | || ||||||||| | |||||||||  ||||||    
T  115927 taataaagattgttgttggtgtcattaaaaataaagaatttagattatatttttttgttatattgttggtgtcattgaaatatataatcatgattagttt 115828  T
Q  99 aatttgttat 108  Q
     |||||||||    
T  115827 gatttgttat 115818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 40808802 - 40808690
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| |||  |||||||| ||||  ||||||||||||||| | | |||||||||| |||||||||||  | ||||    
T  40808802 taataaagattgttgttggtgtcattaaaaaaataagaatttagattaatttttttgttatattgttggcttcattgaaatagataatcatgatttgttt 40808703  T
Q  99 aatttgttataat 111  Q
     ||||||||||||    
T  40808702 gatttgttataat 40808690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 48715918 - 48715827
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||| ||| ||||||| |||||||||| ||||||||||||||||||||||||  ||||||||| | || ||||||||| | |||||||||    
T  48715918 taataatgatcgttgttgatgtcattaaaaaaaagaatttaaattatatttttttggttatattgttggtgtcattgaaataaataatcatg 48715827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8574039 - 8574149
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttg-ttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||||  ||| |||||||||||  |||||||||||  |||||||| | || ||||||||| |||||||||||| ||||||     
T  8574039 taataaagattgttgttggtgtcacaaaaaaaaagaatttattttatatttttttattatattgttggtgtcattgaaatagataatcatggttagtttg 8574138  T
Q  100 atttgttataa 110  Q
     ||||||||||    
T  8574139 gtttgttataa 8574149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 11409006 - 11409119
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| |||||||||| |||  |||||||| |||||||||| ||||||||||  | |||||||| ||| |||||||||||  |||||    
T  11409006 taataaagattgttgttggtgtcattaaaaaaataagaatttagattatatttttttgttatattattcgtttcatttaaatagataatcatgattagtt 11409105  T
Q  98 taatttgttataat 111  Q
    | ||||||| ||||    
T  11409106 tgatttgttttaat 11409119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 12267088 - 12267201
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaag--aatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| |||||||||| |||    |||||| |||||| ||||||||||||||| | || ||||||||| |||||||||||  |||||    
T  12267088 taataaagattgttgttggtgtcattaaaaaaatatcaatttagattataattttttgttatattgttggtgtcattgaaatagataatcatgattagtt 12267187  T
Q  98 taatttgttataat 111  Q
    | ||||||||||||    
T  12267188 tgatttgttataat 12267201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 29716951 - 29717048
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||||||||| |    ||||||||| |||||||||||  |||||| |||| ||||||    
T  29716951 gttgttgatgtcattaaa-aaaataatttaaattatattttttgttatattgtttaggtcattgaaatagataatcatgattagtttgatttattataa 29717048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 47402846 - 47402758
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaatta-tattttttgttatattgctagtttcattgaaacagataatcat 89  Q
    |||||||||| ||| |||||||||||||| |||||||||||||||| | ||||||||||||||| | || ||||||||| | ||||||||    
T  47402846 taataaagattgtttttgttgtcattaaa-aaaagaatttaaattaattttttttgttatattgttggtgtcattgaaataaataatcat 47402758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 12301039 - 12301142
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    ||||||| || ||||||| |||||||||| ||||||||||| ||||||| |||||||||| ||| | || |||| |||| ||||||| |||| ||||||     
T  12301039 taataaaaattgttgttggtgtcattaaaaaaaagaatttagattatatctttttgttatgttgttggtgtcatcgaaatagataattatggttagtttg 12301138  T
Q  100 attt 103  Q
    ||||    
T  12301139 attt 12301142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 33934181 - 33934074
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatt-ttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||||||||| ||||||||| | |||||||| ||||||||| ||| |||| ||||||||| | |||||  ||| ||||||     
T  33934181 taataaagattgttgttgatgtcattaaaaaaaagaattgagattatatttttttgttatgttgttagtgtcattgaaataaataattttggttagtttg 33934082  T
Q  100 atttgtta 107  Q
     |||||||    
T  33934081 ttttgtta 33934074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15470487 - 15470600
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| ||| |||||| |||  |||||||| |||||||||||| |||| |||| | |||||||| ||| |||||||||||| | |||    
T  15470487 taataaagattgttgttggtgttattaaaaaaataagaatttagattatatttttttgttacattgttggtttcattaaaatagataatcatggttggtt 15470586  T
Q  98 taatttgttataat 111  Q
    |  |||||||||||    
T  15470587 tggtttgttataat 15470600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 29689439 - 29689536
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||||||||| |    ||||||||| ||||||||||   |||||| |||| ||||||    
T  29689439 gttgttgatgtcattaaa-aaaataatttaaattatattttttgttatattgtttaggtcattgaaatagataatcataattagtttgatttattataa 29689536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 32305610 - 32305688
Alignment:
Q  31 aaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttata 109  Q
    ||||||||||| ||| | ||||||||||||||| | || ||||||||| |||||||||||  ||||||||||| |||||    
T  32305610 aaaagaatttagatttttttttttgttatattgttggtgtcattgaaatagataatcatgattagtttaatttattata 32305688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43577537 - 43577428
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgt-tatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| |||| || | |||||||| || |||||||| |||||||||||| | || |||| | || ||||||||| ||||||||| || |||||||    
T  43577537 taataaagattgttgctgatttcattaaa-aagagaatttagattatattttttttataaattgttggtgtcattgaaatagataatcacggttagttta 43577439  T
Q  100 atttgttataa 110  Q
    |||||||||||    
T  43577438 atttgttataa 43577428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 44667760 - 44667868
Alignment:
Q  4 taaagatagttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaat 101  Q
    ||||||| ||||||| |||||||||| |||  | |||| | ||||| ||||||||||||||| | || |||| |||| |||||||||||| |||||| ||    
T  44667760 taaagattgttgttggtgtcattaaaaaaattaaaattcagattat-ttttttgttatattgttggtgtcatcgaaatagataatcatggttagtttgat 44667858  T
Q  102 ttgttataat 111  Q
    ||||||||||    
T  44667859 ttgttataat 44667868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 15476461 - 15476558
Alignment:
Q  14 tgttgttgtcattaaataaaagaatttaaattatattt-tttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||| |||||||||| ||||||||||| || ||  || |||||||||||| | || ||||||||| |||||||||| | |||||| |||||||||||    
T  15476461 tgttggtgtcattaaaaaaaagaatttagatcatgcttatttgttatattgtttgtgtcattgaaatagataatcatagttagtttgatttgttataa 15476558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 35673739 - 35673833
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||| || ||||||| |||||||||| ||||    |||||||||| ||||||||||||||| | || ||||||||| |||||||||||| ||||||    
T  35673739 taataaatatcgttgttggtgtcattaaaaaaaa----ttaaattataattttttgttatattgttggtgtcattgaaatagataatcatggttagttt 35673833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 43723919 - 43723815
Alignment:
Q  5 aaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttg 104  Q
    |||||| ||||| | |||||||||| ||| ||||||| ||||| | ||||||||||||| | || ||||||||| | |||||||||| |||||| ||||     
T  43723919 aaagattgttgtcggtgtcattaaaaaaacgaatttagattat-tattttgttatattgttggtgtcattgaaataaataatcatggttagtttgattta 43723821  T
Q  105 ttataa 110  Q
    ||||||    
T  43723820 ttataa 43723815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12264916 - 12265026
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttt--ttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||  |||||||||| || |||||||| ||| | ||||  ||||||||||| | || ||||||||| |||||||||||| ||||||    
T  12264916 taataaagattgttgttagtgtcattaaa-aagagaatttatatttttttttttttgttatattgttggtgtcattgaaatagataatcatggttagttt 12265014  T
Q  99 aatttgttataa 110  Q
     |||| ||||||    
T  12265015 gatttcttataa 12265026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 49162766 - 49162846
Alignment:
Q  31 aaaagaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||| |||||||||| ||||||||||| | || ||||||||| ||||||| |||| |||||| |||| ||||||    
T  49162766 aaaagaatttagattatatttttttgttatattgttggtatcattgaaatagataatgatggttagtttgatttattataa 49162846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 773769 - 773879
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||  ||||||| ||||||| || |||| |||| | |||||||||| ||||||||||  | |||||||||||| |||||||||||  ||||||     
T  773769 taataaagactgttgttggtgtcattgaaaaaaaaaatt-agattatatttttttgttatattattggtttcattgaaatagataatcatgattagtttg 773867  T
Q  100 atttgttataat 111  Q
    | ||||||||||    
T  773868 agttgttataat 773879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 12214175 - 12214085
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattt-tttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    |||||||||| |||| || |||||||||| ||| || |||||||||||||| |||||||||||| | || ||||||||| | ||||||||||    
T  12214175 taataaagattgttgctggtgtcattaaaaaaatga-tttaaattatatttgtttgttatattgttggtgtcattgaaaaatataatcatgg 12214085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16424507 - 16424618
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa-gaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||| ||| ||||||| |||||||||| |||| |||||||||| |||  |||||||||||||  |  | ||||||||| |||||||||||| ||||||    
T  16424507 taataaggattgttgttggtgtcattaaaaaaaaagaatttaaataatagatttttgttatattattgttgtcattgaaatagataatcatggttagttt 16424606  T
Q  99 aatttgttataa 110  Q
      ||||||||||    
T  16424607 tgtttgttataa 16424618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 31529963 - 31529884
Alignment:
Q  33 aagaatttaaattatattt-tttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||| ||||||||| |||| ||||||  | |||| ||||||| |||||||||||| |||||| ||||||||||||    
T  31529963 aagaatttagattatatttctttggtatattattggttttattgaaatagataatcatggttagtttgatttgttataat 31529884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 31845140 - 31845239
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaa-cagataatcatggatagtttaatttgttataa 110  Q
    ||||||| |||||||||| |||||||||||  |||||||||||||||||||  | || ||||| |||  |||||||||||  ||||||  ||||||||||    
T  31845140 gttgttggtgtcattaaaaaaaagaatttaggttatattttttgttatattattggtgtcattaaaataagataatcatgattagtttggtttgttataa 31845239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 24005095 - 24005006
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||||||| ||||||| |||||||||| |||| |||||  |||||||||||| ||||||||| | || ||| ||||| |||||||||||    
T  24005095 taataaagattgttgttggtgtcattaaa-aaaataattttgattatatttttttgttatattgttggtgtcactgaaatagataatcatg 24005006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27904390 - 27904336
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttg 55  Q
    |||||||||| ||||||| |||||||||| ||||||||| | |||||||||||||    
T  27904390 taataaagattgttgttggtgtcattaaaaaaaagaattcagattatattttttg 27904336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 16389000 - 16389053
Alignment:
Q  25 ttaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaa 78  Q
    ||||| ||| ||||||| ||||||||||||||||||||| |||| |||||||||    
T  16389000 ttaaaaaaatgaatttagattatattttttgttatattgttagtgtcattgaaa 16389053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 39728292 - 39728357
Alignment:
Q  45 tatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||||||| |||| ||||||||| |||||| ||||| || |||  ||||||||||    
T  39728292 tatattttttgttatattgttagtgtcattgaaatagataaccatggttattttggtttgttataa 39728357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 44921968 - 44921858
Alignment:
Q  4 taaagatagttgttgttgtcattaaataaaa---gaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    ||||||| || |||| |||||||||| ||||   ||||| | |||||| ||||||||||||||  |||||||||||||| ||| |||||||  ||||| |    
T  44921968 taaagattgtcgttggtgtcattaaaaaaaataagaattaatattataattttttgttatattt-tagtttcattgaaatagacaatcatgattagttaa 44921870  T
Q  100 atttgttataat 111  Q
    ||||||||||||    
T  44921869 atttgttataat 44921858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 49368360 - 49368447
Alignment:
Q  50 tttttgttatattgctagtttcattgaaacagataatcatggatagtttaat---ttgttataatcaaaatcaaaatttcatataaaa 134  Q
    |||||||||||| | | || ||||||||| |||||||||||| |||||| ||   ||||| ||||| |||| ||||||||||||||||    
T  49368360 tttttgttatatcgttggtgtcattgaaatagataatcatggttagtttgatttgttgttttaatctaaattaaaatttcatataaaa 49368447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 5881256 - 5881216
Alignment:
Q  70 tcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  5881256 tcattgaaatagataatcatggttagtttaatttgttataa 5881216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 8214041 - 8214097
Alignment:
Q  31 aaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatc 87  Q
    ||||||||||| ||||||||||||||||||| | | |||||||||||| | ||||||    
T  8214041 aaaagaatttagattatattttttgttatatcgttggtttcattgaaataaataatc 8214097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 12780250 - 12780334
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaag-aatttaaattatattttttgttatattgctagtttcattgaaacagata 84  Q
    |||||||||| ||||||  |||||||||| ||||| |||||| |||| |||||||||||||||  | || ||||||||| |||||    
T  12780250 taataaagattgttgttaatgtcattaaaaaaaaggaatttagattacattttttgttatattattggtgtcattgaaatagata 12780334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 27902952 - 27902889
Alignment:
Q  47 tattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||||| |  | ||||||||| |||||||||||| ||||||  ||||||||||    
T  27902952 tattttttgttatattgttgatgtcattgaaatagataatcatggttagtttggtttgttataa 27902889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 34969390 - 34969284
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||||||| ||||||| |||||||||| ||||    ||| ||||||||||||||||||  | |  | ||||||||| ||||||| |||| ||||||      
T  34969390 taataaagattgttgttggtgtcattaaaaaaaaa---ttatattatattttttgttatagagttgatgtcattgaaatagataatgatggttagtttgg 34969294  T
Q  101 tttgttataa 110  Q
    ||||||||||    
T  34969293 tttgttataa 34969284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 8096275 - 8096317
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattatatttttt 54  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||    
T  8096275 gttgttggtgtcattaaaaaaaagaatttagattatatttttt 8096317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 14888416 - 14888466
Alignment:
Q  48 attttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||||||||||||  ||| ||||||||| |||||||||||| ||||||    
T  14888416 attttttgttatattgtgagtgtcattgaaatagataatcatggttagttt 14888466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 16143491 - 16143439
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaatt--atattttttgttatattg 63  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||||||||||    
T  16143491 gttgttggtgtcattaaa-aaaagaatttaaattatatattttttgttatattg 16143439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 23773414 - 23773299
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatat---tttttgttatattgctagtttcattgaaacagataatcatggatag 95  Q
    |||||||||| ||||||| ||| |||| | |||  | ||||||||||||||   |||||||||||||| | || ||||||||| | |||||||||  |||    
T  23773414 taataaagattgttgttggtgttattacaaaaataataatttaaattatatatttttttgttatattgttggtgtcattgaaataaataatcatgtttag 23773315  T
Q  96 tttaatttgttataat 111  Q
    ||| ||||| ||||||    
T  23773314 tttgatttgctataat 23773299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25298076 - 25298141
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa--gaatttaaattata-ttttttgttatattg 63  Q
    |||||||||| ||||||| |||||||||| ||||  ||||||| |||||| |||||||||||||||    
T  25298076 taataaagatcgttgttggtgtcattaaaaaaaaaagaatttagattatatttttttgttatattg 25298141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 46997051 - 46997001
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattatattttttgttatatt 62  Q
    ||||||| ||| |||||| ||||||||||| |||||||||||||| |||||    
T  46997051 gttgttggtgttattaaaaaaaagaatttagattatattttttgtcatatt 46997001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 50884657 - 50884583
Alignment:
Q  37 atttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||| |||||||||||| ||||||||| | || ||||||||| | |||||||||  ||||||| ||||||||||    
T  50884657 atttatattatatttttttgttatattgttggtgtcattgaaataaataatcatgattagtttagtttgttataa 50884583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 773221 - 773130
Alignment:
Q  1 taataaagatagttgttgttgtcattaaata-aaagaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||||||| |||||||| ||||||||| | ||||||| || ||||||||||||  ||||||||| | || ||||||||| | |||||||||    
T  773221 taataaagatcgttgttgt-gtcattaaaaataaagaatgtagattatattttttttgttatattgttggtgtcattgaaataaataatcatg 773130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 11407418 - 11407479
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||| | || ||||||||| | |||||||||  |||||| |||||||||||    
T  11407418 ttttttgttatattgtttgtgtcattgaaataaataatcatgattagtttgatttgttataa 11407479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 90
Target Start/End: Original strand, 11978258 - 11978338
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattata--ttttttgttatattgctagtttcattgaaacagataatcatg 90  Q
    ||||||| |||||||||| |||| |||| | ||||||  ||||||||||||||| | || ||||||||| | |||||||||    
T  11978258 gttgttggtgtcattaaaaaaaaaaattcagattatattttttttgttatattgttggtgtcattgaaataaataatcatg 11978338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 33326815 - 33326704
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||| || ||||||| |||||||||| |||  |||||| | ||| | ||||| ||||||||  | || ||||||||| |||||||||||  ||||||    
T  33326815 taataaatattgttgttggtgtcattaaaaaaataagaattgagatttt-tttttcgttatattattggtgtcattgaaatagataatcatgattagttt 33326717  T
Q  99 aatttgttataat 111  Q
     ||||||||||||    
T  33326716 tatttgttataat 33326704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 40403434 - 40403546
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatat--tttttgttatattgctagtttcattgaaac-agataatcatggatagtt 97  Q
    |||||||||| ||||||| | |||||||| | |||| |||| |||||||  |||||| ||||||| | || | |||||||  | |||||||||  |||||    
T  40403434 taataaagatcgttgttggtatcattaaaaacaagattttagattatatattttttgctatattgttggtgttattgaaaataaataatcatgattagtt 40403533  T
Q  98 taatttgttataa 110  Q
    |||||||||||||    
T  40403534 taatttgttataa 40403546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48419633 - 48419580
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt 54  Q
    |||||||||| ||||||| | |||||||| ||||||||||| ||||||| ||||    
T  48419633 taataaagatcgttgttggtatcattaaaaaaaagaatttagattatatatttt 48419580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 5935573 - 5935684
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattata--ttttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||| || ||||||  ||| |||||| ||||||||||| ||||||  |||||| |||||||| | || | ||||||| ||||||| |||| || |||    
T  5935573 taataaaaattgttgtttgtgttattaaaaaaaagaatttagattatattttttttattatattgttggtgttattgaaatagataattatggttaattt 5935672  T
Q  99 aatttgttataa 110  Q
     ||||| |||||    
T  5935673 gatttgctataa 5935684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13315267 - 13315212
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttttt 54  Q
    |||||||||| ||||||| | |||||||| |||  |||||||||||||||||||||    
T  13315267 taataaagattgttgttggtatcattaaaaaaataagaatttaaattatatttttt 13315212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 14386893 - 14386984
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcat 89  Q
    |||||||||| ||||||| ||||||| || |||  |||||||| ||||||| |||||||| |||   | |||||||||||| ||||||||||    
T  14386893 taataaagattgttgttgatgtcattcaaaaaataagaatttagattatatatttttgttgtatgattggtttcattgaaatagataatcat 14386984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 17875326 - 17875416
Alignment:
Q  20 tgtcattaaataaaagaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||||||| |||| |||| | |||||||||| ||||||||| | | || ||||||||| || ||||||||| |||||| ||||||||||||    
T  17875326 tgtcattaaaaaaaaaaatt-agattatatttttttgttatatggttggtgtcattgaaatagttaatcatggttagttt-atttgttataat 17875416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 9e-22; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 36700807 - 36700899
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattata--ttttttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    ||||||||||  |||||| |||||||||| ||||||||||||||||||  ||||||||||||||| | |||||||||||| ||||||||||||    
T  36700807 taataaagattattgttggtgtcattaaaaaaaagaatttaaattatatattttttgttatattgttggtttcattgaaatagataatcatgg 36700899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 17704916 - 17705027
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    ||||||||| |||||||||||||||||| |||  |||||||| ||||||||||||||||||||| |||| ||||||||| | |||||||||  ||||||     
T  17704916 aataaagattgttgttgttgtcattaaaaaaattagaatttagattatattttttgttatattgttagtatcattgaaatatataatcatgattagtttg 17705015  T
Q  100 atttgttataat 111  Q
    || | |||||||    
T  17705016 atctattataat 17705027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 7649099 - 7648988
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaatta-tattttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||||||||| ||||||||||| |||| | ||||||||||||||| | ||||||| |||| |||||||| ||  ||||||     
T  7649099 taataaagattgttgttggtgtcattaaaaaaaagaatttatattatttttttttgttatattgttggtttcatcgaaatagataatcctgattagtttg 7649000  T
Q  100 atttgttataat 111  Q
    ||||||||||||    
T  7648999 atttgttataat 7648988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 27832332 - 27832455
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||| || ||||||  |||||||||| |||  |||||||||||||||||||||||||||||  |  | ||||||||| |||||||||||  ||||||    
T  27832332 taataaatattgttgttcgtgtcattaaaaaaataagaatttaaattatattttttgttatattattgatgtcattgaaatagataatcatgattagttt 27832431  T
Q  99 aatttgttataatcaaaatcaaaa 122  Q
    ||||||||||| |  |||||||||    
T  27832432 aatttgttatatttgaaatcaaaa 27832455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 38697046 - 38696949
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| ||||||||||| |||||||||||| ||||||||| | || ||||||||| |||||||||| | ||||||    
T  38697046 taataaagattgttgttggtgtcattaaa-aaaagaatttagattatatttttttgttatattgttggtgtcattgaaatagataatcatagctagttt 38696949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7938172 - 7938063
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattat-attttttgttat--attgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||  |||||||||| ||||||||||| ||||| ||||||||||||  ||||   || ||||||||| |||||||||||| |||||    
T  7938172 taataaagatcgttgttcgtgtcattaaaaaaaagaatttagattataattttttgttataaattg---gtgtcattgaaatagataatcatggttagtt 7938076  T
Q  98 taatttgttataa 110  Q
    || ||||||||||    
T  7938075 tagtttgttataa 7938063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 25754611 - 25754505
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||||| | || ||||||||| | ||||  |||  ||||||     
T  25754611 taataaagattgttgttggtgtcattaaa-aaaagaatttaaattatattttgttgttatattgttggtgtcattgaaatatataacaatgattagtttg 25754513  T
Q  100 atttgtta 107  Q
    ||||||||    
T  25754512 atttgtta 25754505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 42506544 - 42506619
Alignment:
Q  36 aatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||| ||||||||||||||||||||| | || ||||||||   ||||||||||| |||||||||||||||||||    
T  42506544 aatttagattatattttttgttatattgttggtgtcattgaatttgataatcatggttagtttaatttgttataat 42506619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 42919001 - 42918892
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatggatagt 96  Q
    |||||||||| ||||||| ||| |||||| |||  |||||||| ||||||||||||  |||||| || | || ||||||||| |||||||||||| ||||    
T  42919001 taataaagattgttgttggtgtgattaaaaaaataagaatttagattatattttttttgttataatgttggtgtcattgaaatagataatcatggttagt 42918902  T
Q  97 ttaatttgtt 106  Q
    ||||||||||    
T  42918901 ttaatttgtt 42918892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 8990376 - 8990485
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| |||||||||| |||  ||||||||| |||||| |||||||||||||| | |||||||||||| | ||||||||   |||||    
T  8990376 taataaagattgttgttggtgtcattaaaaaaataagaatttaacttatatatttttgttatattgttggtttcattgaaataaataatcataattagtt 8990475  T
Q  98 taatttgtta 107  Q
    | ||||||||    
T  8990476 tgatttgtta 8990485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 28095939 - 28096044
Alignment:
Q  5 aaagatagttgttgttgtcattaaataaaagaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagtttaattt 103  Q
    |||||| ||||||| ||||||| || ||||||||||| ||||||| |||||||||||||| | || ||||||||| |||||||||||| || |||  |||    
T  28095939 aaagattgttgttgatgtcattgaa-aaaagaatttagattatatatttttgttatattgttggtgtcattgaaatagataatcatggttaattttgttt 28096037  T
Q  104 gttataa 110  Q
    |||||||    
T  28096038 gttataa 28096044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 5769755 - 5769867
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttttt-gttatatt-gctagtttcattgaaacagataatcatggatagt 96  Q
    |||||||||| ||||||| |||||||||| |||  | |||||| |||||||||||| |||||||| | | |||||||||||| |||||||||||  ||||    
T  5769755 taataaagattgttgttggtgtcattaaaaaaataaaaatttagattatatttttttgttatatttgttggtttcattgaaatagataatcatgattagt 5769854  T
Q  97 ttaatttgttata 109  Q
    || ||||||||||    
T  5769855 ttgatttgttata 5769867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 42207855 - 42207967
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||||||| |||||||||| |||  |||||||| ||| | ||||||||||||||| | |||| | ||||| ||||||||||   ||||||    
T  42207855 taataaagattgttgttggtgtcattaaaaaaataagaatttagatttttttttttgttatattgttggttttactgaaatagataatcattattagttt 42207954  T
Q  99 aatttgttataat 111  Q
     ||||||||||||    
T  42207955 gatttgttataat 42207967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 43241555 - 43241612
Alignment:
Q  31 aaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatca 88  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||||| |||||||||    
T  43241555 aaaagaatttagattatattttttgttatattgttggtttcattgaaatagataatca 43241612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24836789 - 24836900
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa--gaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||| || ||||||| |||||||||| ||||  ||||||| ||||||| ||||||||||||| | || ||||||| | ||||| |||| | ||||||    
T  24836789 taataaatattgttgttggtgtcattaaaaaaaaaagaatttagattatatcttttgttatattgttggtgtcattgatatagatattcatagttagttt 24836888  T
Q  99 aatttgttataa 110  Q
     |||||||||||    
T  24836889 gatttgttataa 24836900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 30735910 - 30735802
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatt 102  Q
    ||||| || ||||||| |||||||||| ||  ||||||| ||| | |||||| ||||| || |||||||||||||| |||||||||| | |||||| |||    
T  30735910 ataaatatcgttgttggtgtcattaaaaaattgaatttagattttttttttttttatagtgttagtttcattgaaatagataatcatagttagtttgatt 30735811  T
Q  103 tgttataat 111  Q
     ||||||||    
T  30735810 cgttataat 30735802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 41862883 - 41862995
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataa-aagaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| |||||||  ||||||||  || ||||||||| ||||||| |||||||||||||| | |||||||||||| |  ||||||||| || |||    
T  41862883 taataaagattgttgttggcgtcattaagaaataagaatttagattatatatttttgttatattgttggtttcattgaaatatgtaatcatggttaattt 41862982  T
Q  99 aatttgttataat 111  Q
     ||||||||||||    
T  41862983 gatttgttataat 41862995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 15988332 - 15988221
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||||||||| |||| | |||  |||||||||||| ||||||||| | |||||||||||| | || |||| |  ||||||     
T  15988332 taataaagatcgttgttgatgtcattaaaaaaaatacttttgattatatttttttgttatattgttggtttcattgaaatatattatcacgattagtttg 15988233  T
Q  100 atttgttataat 111  Q
    ||||||||||||    
T  15988232 atttgttataat 15988221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 17064780 - 17064701
Alignment:
Q  33 aagaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||| ||||| | |||||||||||||| | ||||||||||||||||||||||||  |||||| |||| |||||||    
T  17064780 aagaatttagattatttatttttgttatattgttggtttcattgaaacagataatcatgattagtttgattttttataat 17064701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25793703 - 25793780
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttt-ttgttatattgctagtttcattgaaa 78  Q
    |||||||||| ||||||| |||||||||  |||||||||||||||||||||| ||||||||||| | || |||||||||    
T  25793703 taataaagattgttgttggtgtcattaag-aaaagaatttaaattatattttgttgttatattgttggtgtcattgaaa 25793780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 31659417 - 31659516
Alignment:
Q  2 aataaagatagttgttgttgtcattaaat---aaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    ||||||||| ||||||| |||| |||||    |||||||||||||||||||||| |||||||||| | || | |||||||||||||||||||  ||||||    
T  31659417 aataaagattgttgttgatgtctttaaaacaaaaaagaatttaaattatatttt-tgttatattgttggtgtaattgaaacagataatcatgattagttt 31659515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 36092346 - 36092285
Alignment:
Q  50 tttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||||||||||| | |||||||||||| |||||||||||| || ||| ||||||||||||    
T  36092346 tttttgttatattgttggtttcattgaaatagataatcatggttaatttgatttgttataat 36092285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 42027694 - 42027581
Alignment:
Q  1 taataaagatagttgttgttgtcattaa-ataaaagaatttaaattatat---tttttgttatattgctagtttcattgaaacagataatcatggatagt 96  Q
    |||||||||  ||||||| ||||||||| | ||||||||||| |||||||   |||||||||||||| | || ||||||||| | |||||||||  ||||    
T  42027694 taataaagaccgttgttgatgtcattaacaaaaaagaatttagattatatatttttttgttatattgttggtgtcattgaaataaataatcatgattagt 42027595  T
Q  97 ttaatttgttataa 110  Q
    ||  ||||||||||    
T  42027594 ttggtttgttataa 42027581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 42097512 - 42097623
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaatt-atatttt-ttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| | ||||| |||| ||||| ||||||||||| ||| ||||||| ||||||||||| | || ||||  |||  ||||||||||| ||||||    
T  42097512 taataaagattgatgttggtgtcgttaaaaaaaagaatttagatttatatttttttgttatattgttggtgtcatgaaaattgataatcatggttagttt 42097611  T
Q  99 aatttgttataa 110  Q
     |||||||||||    
T  42097612 gatttgttataa 42097623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 15232190 - 15232129
Alignment:
Q  50 tttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||||||||||| | |||||||||||| |||||||||||  |||||| ||| ||||||||    
T  15232190 tttttgttatattgttggtttcattgaaatagataatcatgattagtttgattcgttataat 15232129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 40716296 - 40716357
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||| | || ||||||||| |||||||||||  |||||| |||||||||||    
T  40716296 ttttttgttatattgttggtgtcattgaaatagataatcatgattagtttgatttgttataa 40716357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 834488 - 834567
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    ||||||| |||||||||| |||| |||| | |||||||||| ||||||||||| | || ||||||||| ||||||||||||    
T  834488 gttgttggtgtcattaaaaaaaaaaatt-agattatatttttttgttatattgttggtgtcattgaaatagataatcatgg 834567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 1093880 - 1093956
Alignment:
Q  36 aatttaaattatattttttg-ttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||| ||||||||||||  |||||||| | || ||||||||| |||||||||||| |||||| |||| |||||||    
T  1093880 aatttagattatatttttttcttatattgttggtgtcattgaaatagataatcatgggtagtttgattttttataat 1093956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 1611577 - 1611687
Alignment:
Q  4 taaagatagttgttgttgtcattaaataaa---agaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    ||||||| ||||||| |||||||||| |||   | |||||| ||||||| |||||||||||||| | || ||||||||| |||||||| | | ||||||     
T  1611577 taaagattgttgttggtgtcattaaaaaaataaacaatttagattatatatttttgttatattgatggtgtcattgaaatagataatcgtagttagtttg 1611676  T
Q  100 atttgttataa 110  Q
    |||| ||||||    
T  1611677 attttttataa 1611687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 36526515 - 36526594
Alignment:
Q  34 agaatttaaattatattttttgt--tatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||||| |||||||||||| |  ||||||  | || ||||||||| |||||||||||| |||||| ||||||||||||    
T  36526515 agaatttacattatattttttttcttatattattggtatcattgaaatagataatcatgggtagtttgatttgttataat 36526594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 38445579 - 38445456
Alignment:
Q  13 ttgttgttgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtttaa------tttgt 105  Q
    |||||| | |||||||| |||||||| || | ||| |||||| ||||||||| | || ||||||||| |||||||||||| |||||| |      || ||    
T  38445579 ttgttggtatcattaaaaaaaagaatatagaatatttttttttgttatattgttggtgtcattgaaatagataatcatggttagttttaatatttttagt 38445480  T
Q  106 tataatcaaaatcaaaatttcata 129  Q
    | ||||||||||||||||||||||    
T  38445479 tttaatcaaaatcaaaatttcata 38445456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19128645 - 19128530
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa-----gaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggata 94  Q
    |||||||||| ||||||| |||||||||| ||||     ||||||| |||||||||||| ||||||||| | || |||||||||   |||||||||  ||    
T  19128645 taataaagatcgttgttggtgtcattaaaaaaaaaaaaagaatttagattatatttttttgttatattgttggtgtcattgaaattaataatcatgatta 19128546  T
Q  95 gtttaatttgttataa 110  Q
    ||||  ||||||||||    
T  19128545 gtttggtttgttataa 19128530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33629195 - 33629303
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattata-ttttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||||||| | ||||||||  | |||||| ||||||||||||||  | || ||||| ||| |||||||||||  | |||||    
T  33629195 taataaagattgttgttggtgtcattagaaaaaagaat--agattatacttttttgttatattattggtgtcattaaaatagataatcatgattcgttta 33629292  T
Q  100 atttgttataa 110  Q
     ||||||||||    
T  33629293 gtttgttataa 33629303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 35402862 - 35402749
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatt---ttttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||| | |||||||||| ||||||||||| ||| | ||   ||||||||||||| | || | ||||||| | | ||| |||| |||||    
T  35402862 taataaagattgttgtcggtgtcattaaaaaaaagaatttatattttgttttgttttgttatattgttggtgtaattgaaatacaaaattatggttagtt 35402763  T
Q  98 taatttgttataat 111  Q
    || |||||||||||    
T  35402762 tagtttgttataat 35402749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8786754 - 8786646
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||||||| ||||||| |||||||||| ||||  || | |||| | ||||||||||||||  | || ||||||||| ||||||| || | ||||||      
T  8786754 taataaagattgttgttggtgtcattaaa-aaaattatattaatttttttttttgttatattattggtgtcattgaaatagataattatagttagtttgg 8786656  T
Q  101 tttgttataa 110  Q
    ||||||||||    
T  8786655 tttgttataa 8786646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25782044 - 25781968
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataa-aagaatttaaattatatttttt--gttatattgctagtttcatt 74  Q
    ||||||| || ||||||| |||||||||| || ||||||||| ||||||||||||  ||||||||| | ||||||||    
T  25782044 taataaaaattgttgttggtgtcattaaaaaataagaatttagattatattttttttgttatattgttggtttcatt 25781968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 41613068 - 41613171
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    ||||||||| ||||||| |||||||||| |||| |  ||| |||||||||||| ||||||||| ||   ||||| ||| |||||||||||| || ||| |    
T  41613068 aataaagattgttgttggtgtcattaaa-aaaaca--ttagattatatttttttgttatattgtta---tcatttaaatagataatcatggttaatttga 41613161  T
Q  101 tttgttataa 110  Q
    ||||||||||    
T  41613162 tttgttataa 41613171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 30890 - 30782
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaat 101  Q
    ||||||||| ||||||| |||||||||| |||  |||||| ||||||||| ||||||||||| | || | | ||||| |||||||||||| |||||| ||    
T  30890 aataaagattgttgttgatgtcattaaaaaaagaaatttagattatatttgttgttatattgtttgtgttaatgaaatagataatcatggttagtttgat 30791  T
Q  102 ttgttataa 110  Q
    |||||||||    
T  30790 ttgttataa 30782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 57116 - 57206
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataa-aagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||||||| |||||| |||| |||||| || |||| |||| ||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  57116 taataaagattgttgttattgttattaaaaaataagagtttagattatattttttgttatattgttagtttctttgaaatagataatcatg 57206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 64241 - 64331
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataa-aagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatg 90  Q
    |||||||||| |||||| |||| |||||| || |||| |||| ||||||||||||||||||||| ||||||| |||||| |||||||||||    
T  64241 taataaagattgttgttattgttattaaaaaataagagtttagattatattttttgttatattgttagtttctttgaaatagataatcatg 64331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 56748 - 56846
Alignment:
Q  12 gttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttat 108  Q
    ||||||| | ||||||||||||  |||||||| |||||||||||| |||||||| |  ||| ||||||| |||||||||| | || |||||||| ||||    
T  56748 gttgttggtatcattaaataaataagaatttatattatattttttcttatattgttgatttaattgaaatagataatcatagttaatttaattttttat 56846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 63873 - 63971
Alignment:
Q  12 gttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttat 108  Q
    ||||||| | ||||||||||||  |||||||| |||||||||||| |||||||| |  ||| ||||||| |||||||||| | || |||||||| ||||    
T  63873 gttgttggtatcattaaataaataagaatttatattatattttttcttatattgttgatttaattgaaatagataatcatagttaatttaattttttat 63971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 44274 - 44387
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatt-ttttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| |||||||||| |||  |||||||| |||||||| ||||||||||||  | || ||||||||| |||||||||||  |||||    
T  44274 taataaagattgttgttggtgtcattaaaaaaacaagaatttagattatattcttttgttatattattggtgtcattgaaatagataatcatgattagtt 44373  T
Q  98 taatttgttataat 111  Q
    | ||||||||||||    
T  44374 tgatttgttataat 44387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 9894436 - 9894358
Alignment:
Q  33 aagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||| |||||| ||| |||||||||| | || ||||||||| |||||||||||| |||||||||||||||||||    
T  9894436 aagaatttagattatactttctgttatattgttggtgtcattgaaatagataatcatgggtagtttaatttgttataat 9894358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 20715857 - 20715955
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||||||||| ||||||||||| ||||||||||||||| ||||| | ||  || ||||| |||||||||||  |||||||    
T  20715857 taataaagattgttgttggtgtcattaaaaaaaagaatttagattatattttttgttgtattgttggtgccaatgaaatagataatcatgattagttta 20715955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 7451762 - 7451657
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattt-tttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| |||||||  ||||||||| ||||    ||| ||||||||| |||||||||||| | || ||||||||| |||||||||||| |||||||    
T  7451762 taataaagattgttgttggcgtcattaaaaaaaa----ttagattatatttgtttgttatattgttggtgtcattgaaatagataatcatggttagttta 7451667  T
Q  100 atttgttata 109  Q
    ||||||||||    
T  7451666 atttgttata 7451657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 12169937 - 12169823
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatggatagt 96  Q
    |||||||||| ||||||| |||||||||| |||  ||| |||| ||||||||||||  ||||||||| | |||||| ||||| |||||||||||  ||||    
T  12169937 taataaagatcgttgttggtgtcattaaaaaaataagagtttagattatattttttttgttatattgttggtttcaatgaaatagataatcatgattagt 12169838  T
Q  97 ttaatttgttataat 111  Q
    || ||||||||||||    
T  12169837 ttgatttgttataat 12169823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 3833919 - 3833821
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattatattt-tttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||| |||||||||| |||| |||| | ||||||||| |||||||||||| | || ||||||||| |||||||||||| |||||| |||||||||||    
T  3833919 gttgttggtgtcattaaaaaaaaaaatt-agattatatttatttgttatattgttggtgtcattgaaatagataatcatggttagtttgatttgttataa 3833821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 30233317 - 30233427
Alignment:
Q  5 aaagatagttgttgttgtcattaaataaa--agaatttaaattatattt-tttgt-tatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||| ||||||| |||||||||| |||  |||||||| ||||||||| ||| | ||||||| | |||||||||||| |||||||||||| |||||| |    
T  30233317 aaagatcgttgttggtgtcattaaaaaaataagaatttagattatatttatttatatatattgttggtttcattgaaatagataatcatggttagtttta 30233416  T
Q  101 tttgttataat 111  Q
    |||||||||||    
T  30233417 tttgttataat 30233427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 14662383 - 14662270
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatattt-tttgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||| |||||||||| |||  |||||||| ||||||||| |||||||||||| |  ||| ||| ||| |||||||||||| |||||    
T  14662383 taataaagattgttgttggtgtcattaaaaaaataagaatttatattatatttatttgttatattgttgtttttattaaaatagataatcatggttagtt 14662284  T
Q  98 taatttgttataat 111  Q
    | |||||| |||||    
T  14662283 tgatttgtcataat 14662270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31861868 - 31861977
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattt-tttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||| ||| |||||||||| ||||||||||| ||||||| | ||| |||||||| | || ||||||||| | |||||||||| || ||||    
T  31861868 taataaagatcgtttttggtgtcattaaa-aaaagaatttagattatatatattttttatattgttggtgtcattgaaatatataatcatggttaattta 31861966  T
Q  100 atttgttataa 110  Q
    |||||||||||    
T  31861967 atttgttataa 31861977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 19146215 - 19146131
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataat 86  Q
    |||||||||| || |||| |||||||||| ||||||||||| ||||| ||||||||||||||| | || ||||||||| |||||||    
T  19146215 taataaagattgtcgttgatgtcattaaa-aaaagaatttagattattttttttgttatattgttggtgtcattgaaatagataat 19146131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 22837436 - 22837532
Alignment:
Q  15 gttgttgtcattaaataaaagaatttaaattatattt-tttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||| |||||||||| |||| |||||| ||||||||| |||||||||||| | || ||||||||| |||||||||||| |||||| || |||||||||    
T  22837436 gttggtgtcattaaa-aaaacaatttagattatatttatttgttatattgttggtgtcattgaaatagataatcatggttagtttgatgtgttataat 22837532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14426666 - 14426780
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa---agaatttaaattatattttttg-ttatattgctagtttcattgaaacagataatcatggatagt 96  Q
    |||||||||| ||||||| |||||||||| |||   |||||||| ||||||||||||| |||||||  ||||  |||| ||| | |||||||||| ||||    
T  14426666 taataaagattgttgttgatgtcattaaaaaaactaagaatttatattatattttttggttatatttttagtggcatttaaatatataatcatggttagt 14426765  T
Q  97 ttaatttgttataat 111  Q
    || ||||||||||||    
T  14426766 ttgatttgttataat 14426780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 7771838 - 7771733
Alignment:
Q  5 aaagatagttgttgttgtcattaaataaaagaatttaaattat-attttttgttatattgctagtttcattgaaacagataatcatggatagtttaattt 103  Q
    |||||| ||||||| |||| ||||| ||| ||||| ||||||| |||||||||||||||  | || |||||||||||||||||||||| ||||||  |||    
T  7771838 aaagattgttgttggtgtccttaaa-aaatgaatt-aaattattattttttgttatattattggtgtcattgaaacagataatcatggttagtttggttt 7771741  T
Q  104 gttataat 111  Q
    ||||||||    
T  7771740 gttataat 7771733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 8771762 - 8771671
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa-gaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatgg 91  Q
    ||||||||||  |||||| |||||||||| |||| ||||||| ||||||||||||||||||||| | || | | ||||| ||||||||||||    
T  8771762 taataaagattattgttggtgtcattaaaaaaaaagaatttacattatattttttgttatattgttcgtgttagtgaaatagataatcatgg 8771671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 34638021 - 34638134
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||||| ||||||  |||||||||| |||  | |||  |||||||||||||| |||| |||| | || ||||||||| |||||||||||| |||||    
T  34638021 taataaagattgttgtttgtgtcattaaaaaaataaaaataaaaattatatttttttgttacattgttggtgtcattgaaatagataatcatggttagtt 34638120  T
Q  98 taatttgttataat 111  Q
    | ||||||||||||    
T  34638121 tgatttgttataat 34638134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 21104581 - 21104693
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttt--ttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| ||| ||  |||||| ||| ||||||||||| ||||||||||  ||||||||||| | || ||||||||| |||||||||||  |  |||    
T  21104581 taataaagattgttatttgtgtcataaaaaaaaagaatttatattatattttttttgttatattgttggtgtcattgaaatagataatcatgtttgtttt 21104680  T
Q  99 aatttgttataat 111  Q
    ||||| |||||||    
T  21104681 aattttttataat 21104693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28712033 - 28711927
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||||||||| ||||    ||| |||||||||||| ||||||||| | || ||||||||| | |||||||||  |||||||    
T  28712033 taataaagattgttgttggtgtcattaaaaaaaa----ttagattatatttttttgttatattgttggtgtcattgaaataaataatcatgattagttta 28711938  T
Q  100 atttgttataa 110  Q
     ||||||||||    
T  28711937 gtttgttataa 28711927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 172912 - 172833
Alignment:
Q  31 aaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    |||| |||||| ||||||||||||| ||||||| | || ||||||||| | |||| ||||| |||||| |||||||||||    
T  172912 aaaataatttagattatattttttgatatattgttggtgtcattgaaatatataaccatggttagtttgatttgttataa 172833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 23124419 - 23124505
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaa--agaatttaaattata-ttttttgttatattgctagtttcattgaaacagataa 85  Q
    ||||||||| ||||||| |||||||||| |||  |||||||| |||||| ||||||||||||||| | || ||||||||| ||||||    
T  23124419 aataaagattgttgttggtgtcattaaaaaaataagaatttatattataattttttgttatattgttggtgtcattgaaatagataa 23124505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 33573424 - 33573483
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttat 108  Q
    ||||||||||||||| | |||||||||||| |||||| ||||| |||||| |||||||||    
T  33573424 ttttttgttatattgtttgtttcattgaaatagataaacatggttagtttgatttgttat 33573483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 34352220 - 34352145
Alignment:
Q  36 aatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||| |||||| |||||||||||||| | |||| ||||||  ||||| |||||| |||||| ||||||||||||    
T  34352220 aatttagattatagtttttgttatattgttggttttattgaattagatagtcatggttagtttgatttgttataat 34352145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 2485939 - 2485988
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattatattttttgttatatt 62  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||||||||    
T  2485939 gttgttggtgtcattaaa-aaaagaatttagattatattttttgttatatt 2485988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12184899 - 12185007
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttt--ttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||||| |||||| || |||||||| ||||    ||| ||||||||||  ||||||||||| | || ||||||||| |||||||||| | ||||||    
T  12184899 taataaagattgttgtttttatcattaaaaaaaaa---ttagattatattttttttgttatattgttggtgtcattgaaatagataatcattgttagttt 12184995  T
Q  99 aatttgttataa 110  Q
     |||||||||||    
T  12184996 gatttgttataa 12185007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 21254553 - 21254447
Alignment:
Q  5 aaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtttaattt 103  Q
    |||||| ||||||| ||||| ||||  ||| |||||| |||||||||||| ||||||||| | || ||||||||| ||| |||||| | |||||| |||     
T  21254553 aaagattgttgttggtgtcaataaaataaataatttagattatatttttttgttatattgttggtgtcattgaaatagacaatcattgctagttttattc 21254454  T
Q  104 gttataa 110  Q
    |||||||    
T  21254453 gttataa 21254447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 33573538 - 33573600
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||| | |||||||||||| |||||| ||||  |||||| ||||||||||||    
T  33573538 ttttttgttatattgtttgtttcattgaaatagataaacatgattagtttgatttgttataat 33573600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 26252947 - 26252886
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||  | || ||||||||| |||||||||||| |||||| |||||||||||    
T  26252947 ttttttgttatattttttgtgtcattgaaatagataatcatggttagtttgatttgttataa 26252886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17353129 - 17353236
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatat-tttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| ||||||| |||||||||| ||||    ||| ||||||| |||||||||||||| | || ||||||||| ||||||||||   ||||||     
T  17353129 taataaagattgttgttggtgtcattaaaaaaaaa---ttagattatatatttttgttatattgttggtgtcattgaaatagataatcattattagtttt 17353225  T
Q  100 atttgttataa 110  Q
     ||||||||||    
T  17353226 gtttgttataa 17353236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 24062668 - 24062727
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatatt 62  Q
    ||||||||| ||||||| |||||||||| ||||||||||| ||||| |||||| |||||||    
T  24062668 aataaagatcgttgttggtgtcattaaaaaaaagaatttagattat-ttttttattatatt 24062727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 26251988 - 26251875
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaa----gaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||||||| ||||||| |||||||||| ||||    ||||||| |||||||||||| ||||||||  | || | ||||||| ||||||||||   |||||    
T  26251988 ataaagattgttgttggtgtcattaaaaaaaaataagaatttagattatatttttttgttatattattggtgttattgaaatagataatcattactagtt 26251889  T
Q  98 taatttgttataat 111  Q
    | ||||||||||||    
T  26251888 tgatttgttataat 26251875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 32531148 - 32531207
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttata 60  Q
    |||||||||| ||||||| |||||||| | ||||||||||| ||| | ||||||||||||    
T  32531148 taataaagattgttgttggtgtcattagaaaaaagaatttagatttttttttttgttata 32531207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 4075914 - 4075852
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||| | |||||||| ||| ||||||| || | |||||| ||||||||||||    
T  4075914 ttttttgttatattgttggtttcattcaaatagataattatcgttagtttgatttgttataat 4075852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 22535511 - 22535450
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattg 63  Q
    |||||||||| ||| ||| |||||||||  ||||||||||| ||||| |||||||||||||||    
T  22535511 taataaagattgtttttggtgtcattaagaaaaagaatttagattat-ttttttgttatattg 22535450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32333337 - 32333280
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataa-aagaatttaaattatattttttgtt 57  Q
    |||||||||| ||||||| ||||||| || || ||||||||| |||||||||||||||    
T  32333337 taataaagattgttgttggtgtcattgaaaaataagaatttagattatattttttgtt 32333280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 28548769 - 28548821
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaat 101  Q
    ||||||||||||||| | || ||||||||| |||||||| ||| |||||||||    
T  28548769 ttttttgttatattgttggtgtcattgaaatagataatcgtggttagtttaat 28548821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29350500 - 29350555
Alignment:
Q  1 taataaagatagttgttgttgtcatt--aaataaaagaatttaaattatatttttt 54  Q
    |||||| ||| ||||||| |||||||  ||||| ||||||||||||||||||||||    
T  29350500 taataatgattgttgttggtgtcattgaaaatataagaatttaaattatatttttt 29350555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 2079366 - 2079294
Alignment:
Q  40 taaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||| |||||||||||||| | ||||||| |||||||||||| |||||| ||||||||||||    
T  2079366 taaattatatttttttgttatattgctagtgtaattgaaatagataatcatggttagtttgatttgttataat 2079294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 45488996 - 45489109
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaa-tttaaattatatttttt----gttatattgctagtttcattgaaacagataatcatggatag 95  Q
    ||||||| || ||||||| |||||||||| |||| || |||| ||||||||||||    ||||||||| | |||||||||||| |||||||||||| |||    
T  45488996 taataaaaattgttgttggtgtcattaaaaaaaataaatttagattatatttttttgttgttatattgttggtttcattgaaatagataatcatggttag 45489095  T
Q  96 tttaatttgttata 109  Q
    ||| ||||||||||    
T  45489096 tttgatttgttata 45489109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18638237 - 18638343
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||||||| ||||||| |||||||||| |||||||||||||| |   ||||| |||||||| | || ||||||||| | |||||||||  |||||| |    
T  18638237 taataaagattgttgttgatgtcattaaaaaaaagaatttaaatca---ttttttttatattgttggtgtcattgaaataaataatcatgattagtttga 18638333  T
Q  101 tttgttataa 110  Q
    ||||||||||    
T  18638334 tttgttataa 18638343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 27837575 - 27837655
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaagaatttaaattata-ttttttgttatattgctagtttcattgaaacagata 84  Q
    |||||||| |||||||  ||||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||| |||||    
T  27837575 ataaagattgttgttggggtcattaaaaaaaagaatttaaattatatttttttgttatattgctag--tcattgaaatagata 27837655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 45356514 - 45356403
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaag-aatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    ||||||||||  |||||| |||||||||| ||||  |||||||||||| |||||||||||||   | || ||||||||| | |||||||||| ||||||     
T  45356514 taataaagatctttgttggtgtcattaaaaaaaattaatttaaattattttttttgttatatctttggtgtcattgaaataaataatcatggttagtttg 45356415  T
Q  100 atttgttataat 111  Q
    ||||||||||||    
T  45356414 atttgttataat 45356403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 5182693 - 5182580
Alignment:
Q  1 taataaagatagttgttgttgtcattaaata--aaagaatttaaattatattttt-tgttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    ||||||||||  |||||| |||||||||| |  |||||||||  || |||||||| | |||||||| | ||||||||||||  ||||||||||| |||||    
T  5182693 taataaagattattgttggtgtcattaaaaacaaaagaatttcgataatatttttctattatattgttggtttcattgaaatcgataatcatggttagtt 5182594  T
Q  98 taatttgttataat 111  Q
    ||||||||||||||    
T  5182593 taatttgttataat 5182580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 15044321 - 15044220
Alignment:
Q  13 ttgttgttgtcattaaataaaa-gaatttaaattatat--tttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttata 109  Q
    |||||| |||||||||| |||| ||||||| |||||||  |||||||||||||| |||| | ||||||| |||||||||||| ||||||  |||||||||    
T  15044321 ttgttggtgtcattaaaaaaaaagaatttagattatatattttttgttatattgatagtgttattgaaatagataatcatggttagtttggtttgttata 15044222  T
Q  110 at 111  Q
    ||    
T  15044221 at 15044220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12192014 - 12191906
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||| ||| ||||||| |||||| ||| || |||||||| ||||||||||||||||||||| | || | ||||||| |||||||||||  |||||| |    
T  12192014 taataaggattgttgttgatgtcatcaaa-aatagaatttagattatattttttgttatattgttggtgttattgaaatagataatcatgtttagtttga 12191916  T
Q  101 tttgttataa 110  Q
    ||| ||||||    
T  12191915 tttcttataa 12191906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12436442 - 12436334
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||| ||| ||||||| |||||| ||| || |||||||| ||||||||||||||||||||| | || | ||||||| |||||||||||  |||||| |    
T  12436442 taataaggattgttgttgatgtcatcaaa-aatagaatttagattatattttttgttatattgttggtgttattgaaatagataatcatgtttagtttga 12436344  T
Q  101 tttgttataa 110  Q
    ||| ||||||    
T  12436343 tttcttataa 12436334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 4430246 - 4430148
Alignment:
Q  12 gttgttgttgtcattaaataaaagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||| |||||||||| ||| ||||||| |||||||||||| ||||||||| | || ||||| ||| | |||||||||| |||||| |||||||||||    
T  4430246 gttgttgatgtcattaaa-aaaggaatttagattatatttttttgttatattgttggtgtcattaaaatatataatcatggttagtttgatttgttataa 4430148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 38498524 - 38498627
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaat 101  Q
    ||||||||| ||||||| |||||||||   |||||||||| |||   ||||||||||||||| |||| ||||||||| |||||||||| | ||||||  |    
T  38498524 aataaagattgttgttggtgtcattaag--aaagaatttagatt---ttttttgttatattgttagtgtcattgaaatagataatcattgttagtttggt 38498618  T
Q  102 ttgttataa 110  Q
    |||||||||    
T  38498619 ttgttataa 38498627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 41666799 - 41666686
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtt 97  Q
    |||| ||||| ||||||| |||||||||| |||  ||||||||||||||||||||| ||||||||| |  | ||||||||| ||||||| |||| || ||    
T  41666799 taattaagattgttgttggtgtcattaaaaaaattagaatttaaattatatttttttgttatattgttgatgtcattgaaatagataattatggttattt 41666700  T
Q  98 taatttgttataat 111  Q
    |  |||||||||||    
T  41666699 tggtttgttataat 41666686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 42862621 - 42862699
Alignment:
Q  33 aagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||| |||||||||||||||||||||||| | || ||||||||| ||||| | || | |||||| ||||||||||||    
T  42862621 aagaatataaattatattttttgttatattgtttgtatcattgaaatagatagtaattgttagtttgatttgttataat 42862699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 1170529 - 1170633
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaaagaatttaaattatatttt-ttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    ||||||||| ||||||| |||||||||| |||     |||||||||||||| ||||||||||| |  | ||||||||| |||||||||||| ||||||      
T  1170529 aataaagattgttgttggtgtcattaaaaaaa-----ttaaattatatttttttgttatattgttgatgtcattgaaatagataatcatggttagtttgg 1170623  T
Q  101 tttgttataa 110  Q
    ||||||||||    
T  1170624 tttgttataa 1170633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28205457 - 28205565
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||||||| ||||||| |||||||||| ||||||||||  ||| | ||||||||||||||| | || ||||  ||| |||||||||||| || |||      
T  28205457 taataaagattgttgttgatgtcattaaa-aaaagaatttggatttttttttttgttatattgttggtgtcataaaaatagataatcatggttaatttgg 28205555  T
Q  101 tttgttataa 110  Q
    ||||||||||    
T  28205556 tttgttataa 28205565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 7019979 - 7020085
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaa 100  Q
    |||||||||| ||||||| |||||||||| |||| |  ||| ||| | ||||||  ||||||| | |||||||||||| |||||||||||| |||||| |    
T  7019979 taataaagattgttgttggtgtcattaaaaaaaaaa--ttagattttttttttt--tatattgttggtttcattgaaatagataatcatggttagtttga 7020074  T
Q  101 tttgttataat 111  Q
    ||| |||||||    
T  7020075 ttttttataat 7020085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 15919596 - 15919509
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa-gaatttaaattatatttttt-gttatattgctagtttcattgaaacagataat 86  Q
    |||||||||  ||||||| |||||||||| |||| ||||||| |||||||||||| ||||||||| | || ||||||||| |||||||    
T  15919596 taataaagaatgttgttggtgtcattaaaaaaaaagaatttagattatatttttttgttatattgttggtgtcattgaaagagataat 15919509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 12838643 - 12838705
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||| | |||||||||||| | |||||||| | |||||| ||||||||||||    
T  12838643 ttttttgttatattgttggtttcattgaaaaaaataatcattgttagtttgatttgttataat 12838705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 17840990 - 17841081
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaa----gaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcat 89  Q
    |||||||| ||||||| |||||||||| ||||    |||||| ||||||||||||| ||| ||||| |||||||||| ||| ||||||||||    
T  17840990 ataaagatcgttgttggtgtcattaaaaaaaattaagaatttgaattatattttttggttttattgttagtttcatttaaatagataatcat 17841081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 30800600 - 30800539
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||| |  | ||||||||| |||||||||||| |||||| |||||||||||    
T  30800600 ttttttgttatattgttgatgtcattgaaatagataatcatggttagtttgatttgttataa 30800539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3739602 - 3739654
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttt 53  Q
    |||||||| | ||||||| |||||||||| ||| |||||||||||||||||||    
T  3739602 taataaaggttgttgttggtgtcattaaaaaaatgaatttaaattatattttt 3739654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 93118 - 93040
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaa 78  Q
    ||||||||| ||| ||| ||||||||||  ||  |||||||| |||||||||||| |||||||| |||||| |||||||    
T  93118 aataaagattgtttttggtgtcattaaaacaattagaatttagattatattttttattatattgttagttttattgaaa 93040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 24023300 - 24023233
Alignment:
Q  43 attatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||||||||||||||| | || ||||||||| | |||||||||  ||||||  ||||||||||    
T  24023300 attatattttttgttatattgttggtgtcattgaaataaataatcatgattagtttggtttgttataa 24023233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 5049709 - 5049824
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaa---gaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatggatag 95  Q
    |||||||||| | ||||| ||||||||||| |||   |||| || ||||||||||||  ||| ||||||| || ||||| ||| |||||||||  | |||    
T  5049709 taataaagattggtgttgatgtcattaaatcaaataagaatctagattatattttttttgttctattgctggtgtcattaaaatagataatcaatgttag 5049808  T
Q  96 tttaatttgttataat 111  Q
    ||| ||||||||||||    
T  5049809 tttgatttgttataat 5049824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 12542706 - 12542594
Alignment:
Q  3 ataaagatagttgttgttgtcatta--aataaaagaatttaaattatatttttt--gttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||| ||| ||||||| ||||||||  || | ||||||||| ||||||||||||  ||||||||| | || ||| ||||| ||||||  |||| ||||||    
T  12542706 ataatgattgttgttgatgtcattacaaagataagaatttagattatattttttttgttatattgttggtgtcactgaaatagataaaaatggttagttt 12542607  T
Q  99 aatttgttataat 111  Q
    | |||||||||||    
T  12542606 agtttgttataat 12542594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 14436666 - 14436600
Alignment:
Q  45 tatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||||||  | |||||||| |||  ||||||||||| || ||| ||||||||||||    
T  14436666 tatattttttgttatatttttggtttcatttaaattgataatcatggttaatttgatttgttataat 14436600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 20285771 - 20285682
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaaa--gaatttaaattatattttttgttatattgctagtttcattgaaacagataatcat 89  Q
    ||||||||| ||||||| ||||||| || |||   |||| || |||||| |||||||||||||| | |||||||||||| | ||||||||    
T  20285771 aataaagattgttgttggtgtcatttaaaaaatttgaatatagattataatttttgttatattgttggtttcattgaaatatataatcat 20285682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 21072400 - 21072311
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaaa--gaatttaaattatattttttgttatattgctagtttcattgaaacagataatcat 89  Q
    ||||||||| ||||||| ||||||| || |||   |||| || |||||| |||||||||||||| | |||||||||||| | ||||||||    
T  21072400 aataaagattgttgttggtgtcatttaaaaaatttgaatatagattataatttttgttatattgttggtttcattgaaatatataatcat 21072311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 30264265 - 30264158
Alignment:
Q  5 aaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgcta---gtttcattgaaacagataatcatggatagtttaat 101  Q
    |||||| ||||| | |||||||||| ||| ||||||| ||||| | ||||||||||||| |    || ||||||||| | |||||||||| |||||| ||    
T  30264265 aaagattgttgtcggtgtcattaaaaaaatgaatttagattat-tattttgttatattgttgttggtgtcattgaaataaataatcatggttagtttgat 30264167  T
Q  102 ttgttataa 110  Q
    |||||||||    
T  30264166 ttgttataa 30264158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 30682544 - 30682606
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||| | || | ||| ||| |||||||||||| |||||| ||||||||||||    
T  30682544 ttttttgttatattgttggtgttatttaaatagataatcatggttagtttgatttgttataat 30682606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 111
Target Start/End: Complemental strand, 8512087 - 8512006
Alignment:
Q  31 aaaagaatttaaattatattttttgtt-atattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||| |||||||  ||| || ||||||  ||||||||||||| ||||||| |||| || ||| ||||||||||||    
T  8512087 aaaagaatttagattatataattttttgatattgtaagtttcattgaaatagataattatggttactttgatttgttataat 8512006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 23085494 - 23085585
Alignment:
Q  3 ataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagttt 98  Q
    |||||||| ||||||| ||| |||||| |||| |||||| |||   |||||| |||||||| | || ||||||||| |||||||||||| ||||||    
T  23085494 ataaagattgttgttggtgttattaaa-aaaataatttagatt---ttttttattatattgttggtatcattgaaatagataatcatggttagttt 23085585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34966723 - 34966775
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatatttttt 54  Q
    ||||||||||  |||||| |||||||||| ||||||||||| ||||||||||||    
T  34966723 taataaagatttttgttggtgtcattaaa-aaaagaatttagattatatttttt 34966775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 5824743 - 5824699
Alignment:
Q  67 gtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    |||||||||||| | ||||| |||| |||||||||||||||||||    
T  5824743 gtttcattgaaataaataattatggttagtttaatttgttataat 5824699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 2 - 62
Target Start/End: Complemental strand, 18994755 - 18994696
Alignment:
Q  2 aataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatatt 62  Q
    |||||||||  |||||| |||||||||| ||||||||||| ||||| |||||| |||||||    
T  18994755 aataaagattattgttggtgtcattaaaaaaaagaatttagattat-ttttttattatatt 18994696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 45440749 - 45440789
Alignment:
Q  70 tcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||| |||||||||||| |||||| |||||||||||    
T  45440749 tcattgaaatagataatcatggttagtttgatttgttataa 45440789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 44; Significance: 9e-16; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 4077 - 4176
Alignment:
Q  13 ttgttgttgtcattaaataa-aagaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||| |||| |||||| || ||||||||| ||||||||||||||||||||| ||||||| |||||| |||||||||||   ||||| ||||||| ||||    
T  4077 ttgttattgttattaaaaaataagaatttagattatattttttgttatattgttagtttctttgaaatagataatcatgttgagtttgatttgttttaat 4176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 3716 - 3817
Alignment:
Q  12 gttgttgttgtcattaaataaa--agaatttaaattatattttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttata 109  Q
    ||||||| | ||||||||||||  |||||||| |||||||||||| |||||||| |  ||| ||||||| |||||||||| | || ||| |||| |||||    
T  3716 gttgttggtatcattaaataaataagaatttatattatattttttcttatattgttgatttaattgaaatagataatcatagttaatttgattttttata 3815  T
Q  110 at 111  Q
    ||    
T  3816 at 3817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41594 - 41485
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaatta-tattttttgttatattgctagtttcattgaaacagataatcatggatagttta 99  Q
    |||||||||| |||||||||||||||||| ||||||||||  |||| | ||||||||||||||| | || ||||| ||| | |||||||||| || |||     
T  41594 taataaagattgttgttgttgtcattaaa-aaaagaatttggattaattttttttgttatattgttggtgtcattaaaataaataatcatggttaatttg 41496  T
Q  100 atttgttataa 110  Q
    |||||||||||    
T  41495 atttgttataa 41485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0649 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 8470 - 8369
Alignment:
Q  13 ttgttgttgtcattaaataaa--agaatttaaattatattttt-tgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttata 109  Q
    |||||| |||||||||| |||  |||||||| ||||||||||| |||||||| | | |||||||| ||| |||||||||||| ||| || ||||||||||    
T  8470 ttgttggtgtcattaaaaaaataagaatttagattatatttttgtgttatatggttggtttcattaaaatagataatcatggttagcttgatttgttata 8371  T
Q  110 at 111  Q
    ||    
T  8370 at 8369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 22287 - 22179
Alignment:
Q  5 aaagatagttgttgttgtcattaaataaaagaatttaaattatatttt---ttgttatattgctagtttcattgaaacagataatcatggatagtttaat 101  Q
    |||||| ||||||  |||| ||||| |||| |||||| ||||||||||   || |||||||| | || ||||||||| |||||||||||| |||||| ||    
T  22287 aaagattgttgtttgtgtctttaaaaaaaacaatttagattatattttgtttttttatattgttggtgtcattgaaatagataatcatggttagtttgat 22188  T
Q  102 ttgttataa 110  Q
    |||||||||    
T  22187 ttgttataa 22179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 8750 - 8666
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataat 86  Q
    |||||||||| ||||||| | |||||||| |||| |||||| ||||| ||||||||||||||| | || ||||||||| |||||||    
T  8750 taataaagattgttgttgatttcattaaaaaaaaaaatttagattat-ttttttgttatattgttggtgtcattgaaatagataat 8666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 369 - 307
Alignment:
Q  49 ttttttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||||||||| | |||||||||||| |||||| ||||  |||||| ||||||||||||    
T  369 ttttttgttatattgtttgtttcattgaaatagataaacatgattagtttgatttgttataat 307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 21529 - 21451
Alignment:
Q  33 aagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    ||||||||| |||||||||||| ||||||||| | ||  |||||||| | |||||||||| |||||| |||||||||||    
T  21529 aagaatttagattatatttttttgttatattgttggtgccattgaaataaataatcatggttagtttgatttgttataa 21451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4089 - 3998
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaa--agaatttaaattatatt-ttttgttatattgctagtttcattgaaacagataatcat 89  Q
    |||||||||| |||||   |||||||||| |||  |||||||| |||||||| ||||||||||||| | ||||||||||||  |||||||||    
T  4089 taataaagattgttgtcaatgtcattaaaaaaataagaatttagattatattcttttgttatattgttggtttcattgaaattgataatcat 3998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 3805 - 3887
Alignment:
Q  1 taataaagatagttgttgttgtcattaaataaaagaatttaaattatattttttgttatattgctagtttcattgaaacagataa 85  Q
    |||||||||| | | ||| |||||||||| |||| |||| |  ||||| |||||||||||||| | |||||||||||||| ||||    
T  3805 taataaagattgattttggtgtcattaaaaaaaaaaattga--ttataatttttgttatattgttggtttcattgaaacatataa 3887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 6971 - 6867
Alignment:
Q  4 taaagatagttgttgttgtcattaaataaaagaatttaaattatatt--ttttgttatattgctagtttcattgaaacagataatcatggatagtttaat 101  Q
    ||||||| |||||||  ||||||||| ||||||||||| ||||||||  |||||||||||||   || ||||||||| | |||||||||  ||||||  |    
T  6971 taaagattgttgttggcgtcattaaa-aaaagaatttagattatattttttttgttatattg---gtatcattgaaataaataatcatgattagtttggt 6876  T
Q  102 ttgttataa 110  Q
    |||||||||    
T  6875 ttgttataa 6867  T

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Target: scaffold0128 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 43160 - 43068
Alignment:
Q  21 gtcattaaataa-aagaatttaaattatatttttt-gttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataat 111  Q
    ||||||||| || |||||||| ||||||||||||| || |||||| | || ||| ||||| |||||||||||  ||||||  |||||||||||    
T  43160 gtcattaaaaaataagaatttgaattatatttttttgtcatattgttggtgtcaatgaaatagataatcatgattagtttgctttgttataat 43068  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 227229 - 227327
Alignment:
Q  13 ttgttgttgtcattaaataaaagaatttaaattatatttt--ttgttatattgctagtttcattgaaacagataatcatggatagtttaatttgttataa 110  Q
    |||||| |||||| ||| || |||||||||||||||||||  ||||||||||| || | || |||||| | |||| ||||| ||||||  ||||||||||    
T  227229 ttgttggtgtcataaaa-aatagaatttaaattatattttttttgttatattgttactgtcgttgaaataaataaccatggttagttttgtttgttataa 227327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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