View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3679_low_15 (Length: 221)
Name: NF3679_low_15
Description: NF3679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3679_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 38342270 - 38342082
Alignment:
| Q |
19 |
aagcaccaactctagattatagctcagctttgttccagctgctatccgccaaagaaattataattctcagctgctctctcaaccaactcgaagctttatc |
118 |
Q |
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| T |
38342270 |
aagcaccaactctagattatagctcagctttgttccagctgctatccgccaaagaaattataattctcagctgctctctcaaccaactcgaagctttatc |
38342171 |
T |
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| Q |
119 |
ttttcttctacctcaaaataagcactaccctgacatgtgtaaatatatgttattatgatttgtcatctttttcacgtctctgatctgtg |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |
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| T |
38342170 |
ttttcttctacctcaaaataagcactaccctgacatgtgtaaatatatgttattatgatttgtcatctttttcacttctctgatttgtg |
38342082 |
T |
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