View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3680_low_16 (Length: 310)

Name: NF3680_low_16
Description: NF3680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3680_low_16
NF3680_low_16
[»] chr5 (46 HSPs)
chr5 (14-302)||(24529435-24529724)
chr5 (14-302)||(21985765-21986053)
chr5 (14-302)||(24493783-24494071)
chr5 (15-302)||(13095709-13095996)
chr5 (14-302)||(25421747-25422035)
chr5 (14-302)||(9078167-9078455)
chr5 (15-302)||(13025525-13025812)
chr5 (14-302)||(1096682-1096970)
chr5 (14-302)||(25431609-25431897)
chr5 (15-302)||(23390115-23390402)
chr5 (29-281)||(36154461-36154713)
chr5 (14-302)||(8286471-8286748)
chr5 (29-281)||(11580878-11581130)
chr5 (14-296)||(22075240-22075511)
chr5 (26-299)||(21292611-21292873)
chr5 (15-202)||(21871190-21871377)
chr5 (15-202)||(21875470-21875657)
chr5 (14-296)||(22107002-22107273)
chr5 (14-202)||(22119811-22119998)
chr5 (29-202)||(22959166-22959339)
chr5 (14-202)||(24766955-24767142)
chr5 (27-198)||(21565863-21566034)
chr5 (14-202)||(19660455-19660643)
chr5 (67-275)||(22144292-22144500)
chr5 (27-197)||(19669219-19669390)
chr5 (28-201)||(21329127-21329300)
chr5 (28-131)||(21498649-21498752)
chr5 (58-202)||(5888837-5888981)
chr5 (14-61)||(20910430-20910477)
chr5 (13-127)||(21294892-21295006)
chr5 (13-126)||(15441583-15441696)
chr5 (161-210)||(21501919-21501968)
chr5 (163-203)||(20026706-20026746)
chr5 (74-126)||(41294124-41294176)
chr5 (47-125)||(20026514-20026592)
chr5 (13-127)||(24554896-24555010)
chr5 (68-126)||(25406789-25406847)
chr5 (69-127)||(25535351-25535409)
chr5 (164-202)||(25744036-25744074)
chr5 (222-280)||(26740472-26740530)
chr5 (161-198)||(21741308-21741345)
chr5 (68-125)||(22588459-22588516)
chr5 (69-126)||(23336973-23337030)
chr5 (74-126)||(17284430-17284482)
chr5 (235-287)||(22120033-22120085)
chr5 (13-113)||(25808115-25808215)
[»] chr1 (43 HSPs)
chr1 (14-302)||(34509995-34510283)
chr1 (14-302)||(22532484-22532772)
chr1 (14-302)||(50209832-50210119)
chr1 (14-302)||(22354190-22354478)
chr1 (15-280)||(433244-433509)
chr1 (14-298)||(20135406-20135690)
chr1 (14-296)||(27250358-27250629)
chr1 (14-296)||(20846848-20847119)
chr1 (14-302)||(22355803-22356080)
chr1 (14-302)||(22357489-22357766)
chr1 (14-296)||(21026901-21027172)
chr1 (14-299)||(38801020-38801294)
chr1 (14-202)||(20918917-20919104)
chr1 (27-210)||(33681316-33681499)
chr1 (27-201)||(52927612-52927786)
chr1 (27-203)||(21754350-21754525)
chr1 (15-103)||(21301157-21301245)
chr1 (37-202)||(20248592-20248757)
chr1 (29-201)||(22237946-22238117)
chr1 (14-202)||(20091092-20091281)
chr1 (14-128)||(21162117-21162231)
chr1 (28-201)||(22921499-22921672)
chr1 (28-131)||(43697746-43697849)
chr1 (226-278)||(16758890-16758942)
chr1 (226-278)||(21342332-21342384)
chr1 (226-278)||(21347197-21347249)
chr1 (162-280)||(26065176-26065295)
chr1 (47-129)||(21895883-21895965)
chr1 (13-127)||(23763574-23763688)
chr1 (13-126)||(19063884-19063997)
chr1 (13-126)||(19111774-19111887)
chr1 (161-202)||(20637165-20637206)
chr1 (14-99)||(22468315-22468400)
chr1 (46-202)||(28194098-28194254)
chr1 (68-127)||(20524899-20524958)
chr1 (68-127)||(21438157-21438216)
chr1 (47-129)||(21861145-21861227)
chr1 (226-280)||(27653052-27653106)
chr1 (177-282)||(35260860-35260966)
chr1 (67-129)||(35981357-35981419)
chr1 (13-126)||(19105117-19105230)
chr1 (161-202)||(35981451-35981492)
chr1 (227-280)||(52940708-52940761)
[»] chr3 (69 HSPs)
chr3 (14-302)||(40213339-40213627)
chr3 (14-302)||(18438749-18439037)
chr3 (14-302)||(11424381-11424669)
chr3 (14-302)||(25476003-25476291)
chr3 (14-302)||(26687102-26687390)
chr3 (17-302)||(14572803-14573088)
chr3 (14-302)||(14576451-14576739)
chr3 (14-302)||(14973069-14973357)
chr3 (15-302)||(17488071-17488359)
chr3 (15-302)||(17499553-17499841)
chr3 (14-302)||(23082979-23083267)
chr3 (66-302)||(13442489-13442725)
chr3 (14-278)||(17247904-17248168)
chr3 (14-302)||(20698065-20698342)
chr3 (18-281)||(53070321-53070583)
chr3 (14-202)||(12340068-12340255)
chr3 (119-302)||(43841147-43841330)
chr3 (14-302)||(30030054-30030331)
chr3 (14-260)||(12399466-12399698)
chr3 (14-202)||(14669076-14669263)
chr3 (16-202)||(12851984-12852169)
chr3 (14-202)||(14665921-14666108)
chr3 (14-202)||(14735434-14735621)
chr3 (14-123)||(43842572-43842681)
chr3 (14-134)||(14179705-14179825)
chr3 (27-202)||(16097645-16097820)
chr3 (14-202)||(13209946-13210133)
chr3 (27-203)||(12933941-12934117)
chr3 (27-203)||(32307983-32308158)
chr3 (27-199)||(49389275-49389446)
chr3 (27-203)||(49667715-49667890)
chr3 (43-198)||(9513228-9513384)
chr3 (43-198)||(9521203-9521359)
chr3 (18-112)||(17247142-17247236)
chr3 (27-203)||(1644314-1644489)
chr3 (38-134)||(4588457-4588553)
chr3 (15-131)||(16809775-16809887)
chr3 (161-291)||(42386637-42386767)
chr3 (29-134)||(16104163-16104268)
chr3 (188-296)||(16796768-16796875)
chr3 (29-106)||(12171750-12171827)
chr3 (47-280)||(324471-324705)
chr3 (67-282)||(52523398-52523613)
chr3 (47-270)||(2050852-2051073)
chr3 (28-199)||(14234809-14234979)
chr3 (28-131)||(15471310-15471413)
chr3 (226-281)||(23274924-23274979)
chr3 (13-127)||(839609-839723)
chr3 (14-99)||(15877447-15877532)
chr3 (241-283)||(12339985-12340027)
chr3 (13-127)||(24188140-24188254)
chr3 (13-127)||(55149341-55149455)
chr3 (46-202)||(1465059-1465215)
chr3 (47-128)||(22109926-22110007)
chr3 (47-101)||(14501615-14501669)
chr3 (47-125)||(23275133-23275211)
chr3 (47-132)||(605942-606027)
chr3 (29-78)||(11852006-11852055)
chr3 (252-281)||(24340578-24340607)
chr3 (162-203)||(37250932-37250973)
chr3 (13-113)||(4291149-4291249)
chr3 (235-287)||(4588628-4588680)
chr3 (161-201)||(12171869-12171909)
chr3 (74-126)||(15691967-15692019)
chr3 (162-202)||(22110116-22110156)
chr3 (74-126)||(23704458-23704510)
chr3 (74-126)||(23722914-23722966)
chr3 (74-126)||(23741370-23741422)
chr3 (74-126)||(41201487-41201539)
[»] chr2 (26 HSPs)
chr2 (14-302)||(23660237-23660525)
chr2 (15-302)||(22337330-22337617)
chr2 (17-302)||(23076657-23076940)
chr2 (15-302)||(22737799-22738086)
chr2 (14-302)||(27753790-27754078)
chr2 (14-296)||(298433-298714)
chr2 (15-302)||(22730852-22731140)
chr2 (29-291)||(32451562-32451824)
chr2 (15-302)||(23286076-23286352)
chr2 (14-293)||(20309329-20309597)
chr2 (14-293)||(37745-38013)
chr2 (14-296)||(23654028-23654286)
chr2 (27-201)||(22133848-22134020)
chr2 (50-202)||(23071617-23071768)
chr2 (14-121)||(28291920-28292027)
chr2 (63-199)||(28406297-28406433)
chr2 (212-302)||(23060727-23060815)
chr2 (161-278)||(23708383-23708500)
chr2 (28-201)||(25176158-25176331)
chr2 (226-276)||(19672068-19672118)
chr2 (13-127)||(24503473-24503587)
chr2 (14-81)||(23100849-23100916)
chr2 (68-126)||(12829434-12829492)
chr2 (153-202)||(22740719-22740768)
chr2 (74-127)||(27197248-27197301)
chr2 (170-202)||(31756232-31756264)
[»] chr8 (44 HSPs)
chr8 (14-302)||(22626950-22627238)
chr8 (14-302)||(18818028-18818315)
chr8 (14-302)||(23406596-23406884)
chr8 (15-302)||(28648663-28648950)
chr8 (14-302)||(20536423-20536711)
chr8 (14-302)||(18878855-18879143)
chr8 (15-302)||(6759471-6759759)
chr8 (14-302)||(21923546-21923834)
chr8 (15-302)||(23648768-23649055)
chr8 (14-302)||(16091959-16092247)
chr8 (14-302)||(22875280-22875568)
chr8 (14-281)||(41598420-41598687)
chr8 (29-302)||(7372985-7373237)
chr8 (14-293)||(31971479-31971747)
chr8 (14-293)||(16199276-16199543)
chr8 (14-299)||(21918628-21918903)
chr8 (38-296)||(25362793-25363040)
chr8 (14-202)||(5865895-5866082)
chr8 (14-202)||(21491308-21491495)
chr8 (14-202)||(17141229-17141416)
chr8 (14-202)||(21249697-21249884)
chr8 (14-202)||(21255535-21255722)
chr8 (14-131)||(45130649-45130766)
chr8 (27-202)||(26355329-26355504)
chr8 (27-201)||(21674021-21674195)
chr8 (14-281)||(19801045-19801312)
chr8 (190-299)||(45130793-45130901)
chr8 (28-131)||(38854883-38854986)
chr8 (46-202)||(39834147-39834303)
chr8 (28-106)||(6520779-6520857)
chr8 (14-99)||(21389071-21389156)
chr8 (37-131)||(23760481-23760575)
chr8 (226-269)||(13507914-13507957)
chr8 (226-269)||(13597446-13597489)
chr8 (26-125)||(21414857-21414956)
chr8 (13-127)||(20527812-20527926)
chr8 (68-126)||(18865695-18865753)
chr8 (50-128)||(20499049-20499127)
chr8 (47-100)||(13507660-13507713)
chr8 (47-100)||(13597192-13597245)
chr8 (252-281)||(17611968-17611997)
chr8 (29-129)||(16409889-16409989)
chr8 (162-202)||(37116664-37116704)
chr8 (161-201)||(38855015-38855055)
[»] scaffold0080 (1 HSPs)
scaffold0080 (14-302)||(40127-40414)
[»] scaffold0145 (1 HSPs)
scaffold0145 (14-302)||(38975-39262)
[»] chr7 (51 HSPs)
chr7 (15-302)||(38227695-38227982)
chr7 (14-302)||(3563982-3564270)
chr7 (14-302)||(9509404-9509692)
chr7 (14-302)||(12699047-12699335)
chr7 (14-302)||(15143654-15143943)
chr7 (14-296)||(16385876-16386147)
chr7 (29-281)||(17061593-17061845)
chr7 (14-299)||(27847462-27847736)
chr7 (14-293)||(40443613-40443880)
chr7 (29-281)||(44116741-44116992)
chr7 (14-296)||(26212217-26212488)
chr7 (29-281)||(12756350-12756601)
chr7 (14-198)||(39267264-39267447)
chr7 (14-202)||(2831924-2832110)
chr7 (14-202)||(9751168-9751355)
chr7 (14-202)||(18302494-18302681)
chr7 (14-202)||(28504919-28505106)
chr7 (27-203)||(810760-810936)
chr7 (27-202)||(44014489-44014664)
chr7 (14-198)||(15754505-15754689)
chr7 (170-299)||(10589256-10589384)
chr7 (14-202)||(34201099-34201286)
chr7 (14-106)||(11995676-11995768)
chr7 (67-282)||(12255462-12255677)
chr7 (27-131)||(68132-68236)
chr7 (76-268)||(16056576-16056769)
chr7 (28-131)||(16324392-16324495)
chr7 (27-106)||(18006052-18006131)
chr7 (28-131)||(47832194-47832297)
chr7 (47-278)||(2279769-2280000)
chr7 (67-210)||(22073223-22073366)
chr7 (28-203)||(16219348-16219523)
chr7 (13-127)||(44407988-44408102)
chr7 (38-131)||(9389337-9389430)
chr7 (14-81)||(19649103-19649170)
chr7 (69-127)||(11262691-11262749)
chr7 (13-127)||(14953560-14953674)
chr7 (13-127)||(26420340-26420454)
chr7 (14-131)||(21064780-21064897)
chr7 (163-202)||(9389462-9389501)
chr7 (68-127)||(14959526-14959585)
chr7 (164-202)||(68061-68099)
chr7 (47-101)||(2529628-2529682)
chr7 (252-281)||(10063678-10063707)
chr7 (74-127)||(11547957-11548010)
chr7 (74-127)||(11554553-11554606)
chr7 (74-127)||(14148932-14148985)
chr7 (14-99)||(24054884-24054969)
chr7 (235-287)||(9751390-9751442)
chr7 (74-126)||(20702681-20702733)
chr7 (74-126)||(32768038-32768090)
[»] scaffold0011 (2 HSPs)
scaffold0011 (14-302)||(52128-52415)
scaffold0011 (14-296)||(167608-167879)
[»] scaffold0292 (2 HSPs)
scaffold0292 (26-302)||(557-833)
scaffold0292 (14-302)||(3685-3973)
[»] scaffold0639 (1 HSPs)
scaffold0639 (14-302)||(8690-8978)
[»] scaffold0175 (2 HSPs)
scaffold0175 (15-302)||(13307-13594)
scaffold0175 (14-201)||(34437-34623)
[»] scaffold0122 (2 HSPs)
scaffold0122 (15-302)||(25684-25971)
scaffold0122 (14-302)||(33112-33401)
[»] scaffold0121 (1 HSPs)
scaffold0121 (17-302)||(8154-8439)
[»] scaffold0231 (1 HSPs)
scaffold0231 (29-302)||(23097-23370)
[»] scaffold0003 (2 HSPs)
scaffold0003 (14-299)||(339569-339853)
scaffold0003 (14-61)||(71742-71789)
[»] scaffold0056 (3 HSPs)
scaffold0056 (14-302)||(16833-17121)
scaffold0056 (14-130)||(78980-79096)
scaffold0056 (176-281)||(79109-79214)
[»] chr6 (48 HSPs)
chr6 (32-300)||(29060757-29061025)
chr6 (14-302)||(18409445-18409733)
chr6 (14-302)||(17287414-17287702)
chr6 (14-302)||(22779845-22780133)
chr6 (14-302)||(19303159-19303447)
chr6 (14-297)||(20593993-20594276)
chr6 (26-299)||(20360601-20360863)
chr6 (17-302)||(20637915-20638189)
chr6 (24-298)||(25628983-25629257)
chr6 (14-203)||(29808501-29808691)
chr6 (29-291)||(18821463-18821714)
chr6 (14-203)||(28496091-28496280)
chr6 (29-277)||(18456955-18457202)
chr6 (15-293)||(16920263-16920530)
chr6 (14-202)||(21939699-21939886)
chr6 (14-291)||(22831728-22831994)
chr6 (27-200)||(19652512-19652685)
chr6 (14-198)||(1561622-1561806)
chr6 (14-202)||(4667831-4668019)
chr6 (14-202)||(4185441-4185629)
chr6 (20-202)||(25611347-25611530)
chr6 (14-202)||(4189271-4189459)
chr6 (14-202)||(4674678-4674866)
chr6 (14-198)||(25603003-25603188)
chr6 (15-202)||(15894049-15894237)
chr6 (28-201)||(27332916-27333089)
chr6 (28-201)||(27393656-27393829)
chr6 (14-250)||(11185769-11185994)
chr6 (14-132)||(22334500-22334618)
chr6 (14-135)||(31155016-31155137)
chr6 (28-281)||(25644558-25644811)
chr6 (47-203)||(23019721-23019877)
chr6 (11-127)||(31164473-31164589)
chr6 (27-202)||(22080368-22080543)
chr6 (28-199)||(25956253-25956424)
chr6 (14-86)||(22439230-22439302)
chr6 (14-61)||(27415572-27415619)
chr6 (13-127)||(22331803-22331917)
chr6 (14-99)||(19863395-19863480)
chr6 (68-126)||(1538628-1538686)
chr6 (68-126)||(1544727-1544785)
chr6 (69-126)||(16372223-16372280)
chr6 (14-99)||(22432667-22432752)
chr6 (153-202)||(25641942-25641991)
chr6 (13-113)||(14099004-14099104)
chr6 (162-202)||(19668688-19668728)
chr6 (47-127)||(20109605-20109685)
chr6 (73-113)||(31316781-31316821)
[»] scaffold0305 (1 HSPs)
scaffold0305 (14-302)||(20618-20906)
[»] scaffold0021 (5 HSPs)
scaffold0021 (14-302)||(124800-125085)
scaffold0021 (27-143)||(62935-63051)
scaffold0021 (14-79)||(175202-175267)
scaffold0021 (162-203)||(136132-136173)
scaffold0021 (162-203)||(144840-144881)
[»] chr4 (61 HSPs)
chr4 (15-300)||(14038865-14039151)
chr4 (14-302)||(16377140-16377429)
chr4 (14-302)||(22636649-22636937)
chr4 (14-302)||(44053044-44053332)
chr4 (14-302)||(15091111-15091400)
chr4 (14-261)||(7798953-7799200)
chr4 (15-281)||(44928542-44928808)
chr4 (14-296)||(12902978-12903248)
chr4 (14-302)||(16239610-16239876)
chr4 (17-296)||(7089098-7089366)
chr4 (14-299)||(3096861-3097135)
chr4 (29-281)||(44102446-44102697)
chr4 (14-293)||(14052932-14053199)
chr4 (157-302)||(7893915-7894060)
chr4 (14-202)||(15552129-15552316)
chr4 (38-296)||(17047726-17047972)
chr4 (14-202)||(24029057-24029244)
chr4 (14-202)||(13812427-13812614)
chr4 (14-202)||(20156908-20157095)
chr4 (29-276)||(21815265-21815511)
chr4 (14-202)||(22633831-22634018)
chr4 (29-143)||(6190807-6190921)
chr4 (14-200)||(16596963-16597148)
chr4 (29-267)||(21814936-21815173)
chr4 (29-267)||(21818358-21818595)
chr4 (27-202)||(8846689-8846865)
chr4 (161-296)||(23374125-23374259)
chr4 (27-203)||(12774313-12774488)
chr4 (28-131)||(39705920-39706023)
chr4 (47-288)||(15464580-15464822)
chr4 (74-282)||(52242871-52243079)
chr4 (196-291)||(6190688-6190782)
chr4 (46-202)||(15099665-15099821)
chr4 (68-115)||(17046718-17046765)
chr4 (28-106)||(13844950-13845028)
chr4 (47-131)||(43198239-43198323)
chr4 (13-127)||(14679325-14679439)
chr4 (47-129)||(15868286-15868368)
chr4 (115-202)||(3332201-3332287)
chr4 (15-127)||(14685534-14685646)
chr4 (13-127)||(23838796-23838910)
chr4 (46-131)||(15190703-15190788)
chr4 (47-129)||(13424-13506)
chr4 (68-126)||(386038-386096)
chr4 (14-48)||(3332287-3332321)
chr4 (68-126)||(7900855-7900913)
chr4 (68-126)||(15321778-15321836)
chr4 (68-126)||(51493502-51493560)
chr4 (252-281)||(15371438-15371467)
chr4 (252-281)||(15373719-15373748)
chr4 (252-281)||(16223768-16223797)
chr4 (47-100)||(32851868-32851921)
chr4 (74-127)||(35170991-35171044)
chr4 (74-127)||(40471837-40471890)
chr4 (170-202)||(15190632-15190664)
chr4 (13-113)||(16956279-16956379)
chr4 (235-287)||(20157130-20157182)
chr4 (235-287)||(24028970-24029022)
chr4 (74-126)||(26284598-26284650)
chr4 (161-201)||(39706052-39706092)
chr4 (74-126)||(40478511-40478563)
[»] scaffold0026 (5 HSPs)
scaffold0026 (14-302)||(40072-40359)
scaffold0026 (14-143)||(39549-39678)
scaffold0026 (80-187)||(26555-26662)
scaffold0026 (199-302)||(26110-26213)
scaffold0026 (74-202)||(59181-59308)
[»] scaffold0016 (3 HSPs)
scaffold0016 (15-302)||(2066-2353)
scaffold0016 (38-202)||(207161-207324)
scaffold0016 (235-287)||(207359-207411)
[»] scaffold0120 (3 HSPs)
scaffold0120 (15-281)||(16323-16588)
scaffold0120 (14-292)||(32577-32855)
scaffold0120 (14-292)||(46150-46428)
[»] scaffold0228 (3 HSPs)
scaffold0228 (15-302)||(4722-5010)
scaffold0228 (15-302)||(12304-12592)
scaffold0228 (15-302)||(22256-22544)
[»] scaffold0042 (1 HSPs)
scaffold0042 (15-302)||(23921-24207)
[»] scaffold0217 (1 HSPs)
scaffold0217 (24-302)||(16227-16506)
[»] scaffold0647 (1 HSPs)
scaffold0647 (14-302)||(5739-6027)
[»] scaffold0034 (2 HSPs)
scaffold0034 (29-291)||(51517-51779)
scaffold0034 (47-268)||(32784-33006)
[»] scaffold0627 (1 HSPs)
scaffold0627 (14-258)||(163-407)
[»] scaffold0395 (2 HSPs)
scaffold0395 (14-301)||(580-868)
scaffold0395 (14-131)||(8110-8227)
[»] scaffold0193 (1 HSPs)
scaffold0193 (14-302)||(13426-13703)
[»] scaffold1842 (1 HSPs)
scaffold1842 (14-296)||(678-949)
[»] scaffold0456 (1 HSPs)
scaffold0456 (14-294)||(10055-10324)
[»] scaffold0070 (1 HSPs)
scaffold0070 (14-302)||(4738-5026)
[»] scaffold0358 (2 HSPs)
scaffold0358 (14-293)||(159-428)
scaffold0358 (14-293)||(4935-5204)
[»] scaffold0839 (1 HSPs)
scaffold0839 (14-266)||(1696-1947)
[»] scaffold0540 (2 HSPs)
scaffold0540 (14-218)||(631-835)
scaffold0540 (230-302)||(2985-3057)
[»] scaffold0413 (1 HSPs)
scaffold0413 (14-281)||(15233-15500)
[»] scaffold0598 (1 HSPs)
scaffold0598 (14-293)||(681-949)
[»] scaffold0490 (1 HSPs)
scaffold0490 (14-297)||(2172-2444)
[»] scaffold0427 (1 HSPs)
scaffold0427 (14-293)||(13719-13987)
[»] scaffold0084 (1 HSPs)
scaffold0084 (14-302)||(10378-10661)
[»] scaffold0114 (2 HSPs)
scaffold0114 (14-294)||(15094-15363)
scaffold0114 (14-88)||(32894-32968)
[»] scaffold0352 (1 HSPs)
scaffold0352 (14-302)||(17626-17893)
[»] scaffold0142 (2 HSPs)
scaffold0142 (29-273)||(17024-17268)
scaffold0142 (96-202)||(7471-7576)
[»] scaffold0235 (2 HSPs)
scaffold0235 (43-299)||(11171-11416)
scaffold0235 (47-101)||(14055-14109)
[»] scaffold0100 (1 HSPs)
scaffold0100 (14-203)||(20426-20615)
[»] scaffold0403 (1 HSPs)
scaffold0403 (15-296)||(5070-5339)
[»] scaffold0718 (1 HSPs)
scaffold0718 (14-294)||(4760-5029)
[»] scaffold0309 (1 HSPs)
scaffold0309 (14-297)||(6830-7102)
[»] scaffold0351 (1 HSPs)
scaffold0351 (14-299)||(16497-16771)
[»] scaffold0031 (1 HSPs)
scaffold0031 (14-281)||(20044-20310)
[»] scaffold0113 (1 HSPs)
scaffold0113 (17-293)||(32288-32553)
[»] scaffold0141 (1 HSPs)
scaffold0141 (129-302)||(39691-39864)
[»] scaffold0049 (1 HSPs)
scaffold0049 (129-302)||(74948-75121)
[»] scaffold0266 (1 HSPs)
scaffold0266 (14-143)||(18576-18705)
[»] scaffold0165 (3 HSPs)
scaffold0165 (38-296)||(3702-3949)
scaffold0165 (38-296)||(7766-8013)
scaffold0165 (47-129)||(27293-27375)
[»] scaffold0088 (1 HSPs)
scaffold0088 (15-302)||(21126-21392)
[»] scaffold0484 (1 HSPs)
scaffold0484 (38-296)||(1135-1382)
[»] scaffold0876 (1 HSPs)
scaffold0876 (14-137)||(2703-2826)
[»] scaffold0130 (2 HSPs)
scaffold0130 (124-302)||(28045-28223)
scaffold0130 (14-129)||(28924-29039)
[»] scaffold0503 (1 HSPs)
scaffold0503 (29-281)||(12165-12416)
[»] scaffold0221 (1 HSPs)
scaffold0221 (14-199)||(12427-12611)
[»] scaffold0064 (1 HSPs)
scaffold0064 (14-293)||(47210-47478)
[»] scaffold0347 (1 HSPs)
scaffold0347 (14-202)||(344-530)
[»] scaffold0037 (1 HSPs)
scaffold0037 (14-202)||(79950-80137)
[»] scaffold0075 (2 HSPs)
scaffold0075 (15-202)||(7913-8099)
scaffold0075 (47-129)||(53122-53204)
[»] scaffold0032 (2 HSPs)
scaffold0032 (18-293)||(51803-52067)
scaffold0032 (27-115)||(108967-109055)
[»] scaffold0556 (2 HSPs)
scaffold0556 (27-202)||(7126-7301)
scaffold0556 (47-203)||(8330-8486)
[»] scaffold0161 (1 HSPs)
scaffold0161 (15-202)||(2064-2250)
[»] scaffold0028 (3 HSPs)
scaffold0028 (27-203)||(132967-133143)
scaffold0028 (13-126)||(41901-42014)
scaffold0028 (14-126)||(57408-57520)
[»] scaffold0192 (1 HSPs)
scaffold0192 (15-202)||(10226-10412)
[»] scaffold0389 (1 HSPs)
scaffold0389 (14-128)||(13226-13340)
[»] scaffold0106 (2 HSPs)
scaffold0106 (14-293)||(1510-1778)
scaffold0106 (14-293)||(7487-7755)
[»] scaffold0475 (1 HSPs)
scaffold0475 (14-202)||(9391-9579)
[»] scaffold0261 (2 HSPs)
scaffold0261 (14-202)||(15974-16161)
scaffold0261 (9-99)||(1755-1845)
[»] scaffold0166 (1 HSPs)
scaffold0166 (14-202)||(9452-9639)
[»] scaffold0218 (1 HSPs)
scaffold0218 (15-198)||(28899-29081)
[»] scaffold0124 (1 HSPs)
scaffold0124 (14-202)||(24268-24456)
[»] scaffold0150 (1 HSPs)
scaffold0150 (27-203)||(32397-32573)
[»] scaffold0151 (1 HSPs)
scaffold0151 (14-121)||(10540-10647)
[»] scaffold0211 (1 HSPs)
scaffold0211 (27-203)||(28440-28616)
[»] scaffold1984 (1 HSPs)
scaffold1984 (27-210)||(437-620)
[»] scaffold0023 (1 HSPs)
scaffold0023 (27-203)||(101709-101884)
[»] scaffold0001 (1 HSPs)
scaffold0001 (29-202)||(161000-161173)
[»] scaffold0628 (1 HSPs)
scaffold0628 (27-203)||(2434-2609)
[»] scaffold0125 (1 HSPs)
scaffold0125 (27-202)||(45420-45596)
[»] scaffold0102 (1 HSPs)
scaffold0102 (27-210)||(19573-19756)
[»] scaffold0247 (2 HSPs)
scaffold0247 (17-125)||(6449-6557)
scaffold0247 (162-218)||(6561-6617)
[»] scaffold0810 (1 HSPs)
scaffold0810 (29-131)||(3318-3420)
[»] scaffold0020 (1 HSPs)
scaffold0020 (28-202)||(15462-15636)
[»] scaffold0207 (1 HSPs)
scaffold0207 (29-130)||(2277-2378)
[»] scaffold1137 (1 HSPs)
scaffold1137 (29-203)||(1934-2108)
[»] scaffold0278 (1 HSPs)
scaffold0278 (27-131)||(5979-6083)
[»] scaffold0010 (3 HSPs)
scaffold0010 (27-202)||(130222-130397)
scaffold0010 (162-280)||(60479-60598)
scaffold0010 (13-127)||(242420-242534)
[»] scaffold0555 (3 HSPs)
scaffold0555 (14-134)||(962-1082)
scaffold0555 (28-106)||(10200-10278)
scaffold0555 (161-203)||(10305-10347)
[»] scaffold0423 (1 HSPs)
scaffold0423 (14-94)||(10890-10970)
[»] scaffold0333 (2 HSPs)
scaffold0333 (28-199)||(6931-7102)
scaffold0333 (28-199)||(14311-14482)
[»] scaffold0138 (3 HSPs)
scaffold0138 (28-202)||(13255-13429)
scaffold0138 (13-127)||(29836-29950)
scaffold0138 (13-127)||(41832-41946)
[»] scaffold0621 (1 HSPs)
scaffold0621 (27-131)||(6923-7026)
[»] scaffold2044 (1 HSPs)
scaffold2044 (15-72)||(1075-1132)
[»] scaffold0078 (1 HSPs)
scaffold0078 (47-203)||(10842-10998)
[»] scaffold0116 (2 HSPs)
scaffold0116 (50-202)||(43438-43590)
scaffold0116 (50-131)||(47358-47439)
[»] scaffold0012 (2 HSPs)
scaffold0012 (226-281)||(225643-225698)
scaffold0012 (67-131)||(227878-227942)
[»] scaffold0530 (1 HSPs)
scaffold0530 (46-123)||(678-755)
[»] scaffold0320 (1 HSPs)
scaffold0320 (47-131)||(12381-12465)
[»] scaffold0507 (1 HSPs)
scaffold0507 (47-203)||(7708-7864)
[»] scaffold0107 (1 HSPs)
scaffold0107 (15-72)||(15049-15106)
[»] scaffold0243 (1 HSPs)
scaffold0243 (46-126)||(5772-5852)
[»] scaffold0586 (1 HSPs)
scaffold0586 (26-125)||(2245-2344)
[»] scaffold0357 (2 HSPs)
scaffold0357 (164-282)||(15866-15985)
scaffold0357 (226-282)||(13365-13421)
[»] scaffold0046 (1 HSPs)
scaffold0046 (14-80)||(14914-14980)
[»] scaffold0525 (1 HSPs)
scaffold0525 (13-126)||(3505-3618)
[»] scaffold0346 (1 HSPs)
scaffold0346 (15-72)||(17343-17400)
[»] scaffold0233 (1 HSPs)
scaffold0233 (13-126)||(14169-14282)
[»] scaffold0216 (1 HSPs)
scaffold0216 (13-126)||(8506-8619)
[»] scaffold0004 (2 HSPs)
scaffold0004 (68-127)||(58102-58161)
scaffold0004 (14-99)||(70211-70296)
[»] scaffold0268 (1 HSPs)
scaffold0268 (47-101)||(586-640)
[»] scaffold0259 (1 HSPs)
scaffold0259 (68-126)||(10541-10599)
[»] scaffold0123 (1 HSPs)
scaffold0123 (238-280)||(25343-25385)
[»] scaffold0109 (2 HSPs)
scaffold0109 (68-126)||(27006-27064)
scaffold0109 (47-101)||(35521-35575)
[»] scaffold0076 (2 HSPs)
scaffold0076 (226-280)||(24427-24481)
scaffold0076 (47-131)||(24171-24255)
[»] scaffold0029 (1 HSPs)
scaffold0029 (68-126)||(125797-125855)
[»] scaffold0022 (2 HSPs)
scaffold0022 (67-129)||(80726-80788)
scaffold0022 (162-202)||(128735-128775)
[»] scaffold0013 (1 HSPs)
scaffold0013 (68-126)||(9704-9762)
[»] scaffold0370 (1 HSPs)
scaffold0370 (74-127)||(17422-17475)
[»] scaffold0139 (1 HSPs)
scaffold0139 (14-79)||(20418-20483)
[»] scaffold0051 (1 HSPs)
scaffold0051 (13-126)||(37071-37184)
[»] scaffold0005 (1 HSPs)
scaffold0005 (74-126)||(307460-307512)


Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 24529724 - 24529435
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  24529724 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtagg 24529625  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||||| |||||||||  |||||||||||| |||| |||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  24529624 atgagattgaacctggaaaggttgtagaatgaaacttttggaattctgatctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 24529525  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  24529524 acagagagtcttgttaggtttttgcgacctttgttgcactagtagttgagagttgaaccttggggtagtattgaaacttaatgatgatgt 24529435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 21985765 - 21986053
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  21985765 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 21985864  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||| ||||||  |||||||||||| ||||||||||| ||||||||| || |||||| |||||||||||||||||||||||    
T  21985865 atgagattgaacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacggcaagcagaggccctcgcctcgcgagtgacccagaa 21985963  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  21985964 acagagtgtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattcagacttgatgatgatgt 21986053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 24494071 - 24493783
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24494071 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtagg 24493972  T
Q  114 atgagattgaacctggaaagattgtagaattgaactttt-ggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||| ||||||  ||||||| ||| |||||||||||| |||||||||||| ||||||| |||||||| |||| ||||| ||    
T  24493971 atgagattgaacctggaaagatt-tagaatgaaactttttggattctgacctgaactcgccacggcgagcagaggctttcgcctcgtgagtaacccataa 24493873  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  24493872 acagagtgtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattaagacttaataatgatgt 24493783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 13095996 - 13095709
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13095996 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtagga 13095897  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||| ||||||||||||| ||||||  ||||| ||| || ||||||||||| |||||| ||||| |||||| |||||||||||||||||| |||||    
T  13095896 tgagattggacctggaaagatt-tagaatgaaacttgtgggattctgacctgaactcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaa 13095798  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  13095797 cagagtgacttgttaggtttttgcgacctttgttgcacgagtcgttgagagttgaaccttggggtagtattaagacttaatgatgatgt 13095709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 25422035 - 25421747
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||  ||||    
T  25422035 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctattaatgattaggaaagaacttagg 25421936  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||| ||||||||||||| ||||||  |||||| |||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  25421935 atgagattggacctggaaagatt-tagaatgaaactttcggaaatctgacttgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaa 25421837  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    || ||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25421836 accgagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagcattgagacttaatgatgatgt 25421747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 9078455 - 9078167
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||     
T  9078455 cagagagcatgcaagatttcgtgattttgacttttgagttgatctttatatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaga 9078356  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||| ||||||  ||| ||| |||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  9078355 atgagattgaacctggaaagatt-tagaatgaaaccttttgaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 9078257  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||||| |||||||| || ||| |||| ||||||| || |||||||||||||||||||||||||||||||||||||||    
T  9078256 acagagtgccttgttaggattttgcgatctgtgtcgcacaagttgttaagggttgaaccttggggtagtattgagacttaatgatgatgt 9078167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 13025812 - 13025525
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| | |||| |||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13025812 agagagcatgcaagatttcgtgattttgaattttgagttgatccttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtagga 13025713  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||| ||||||||||||| ||||||  ||||| ||| || ||||||||||| |||||| ||||| | |||| |||||||||||||||||| |||||    
T  13025712 tgagattggacctggaaagatt-tagaatgaaacttgtgggattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacctagaaa 13025614  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  13025613 cagagtgacttgttaggtttttgcgacctttgttgcacgatttgttgagagttgaaccttggggtagtattaagacttaatgatgatgt 13025525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 1096970 - 1096682
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1096970 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 1096871  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttgg-aatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||| |||||||||||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1096870 atgagattgaatctggaaagattgcagaa-tgaacttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 1096772  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||  | ||| ||||  |||||||| || ||| |||| ||||||| | ||||| |||||||||||||||||||||||||||| |||||    
T  1096771 acagaatgcctttttagaattttgcgatctctgtcgcacaagttgttaaaagttggaccttggggtagtattgagacttaatgaggatgt 1096682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 25431897 - 25431609
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||| || |||||||||||||||||| ||||    
T  25431897 cagagagcgtgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttagg 25431798  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||| ||||||||||||| ||||||  ||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  25431797 atgagattggacctggaaagatt-tagaatgaaacttttggaaatctgacttgaactcgccacggcgagtagaggctctcacctcgcgagtgacccagaa 25431699  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |  ||| | ||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  25431698 atcgagtgccttgttaggattttgcgacctttgttacacgagttgttgagagttgaaccttgaggtagcattgagacttaatgatgatgt 25431609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 15 - 302
Target Start/End: Original strand, 23390115 - 23390402
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23390115 agagagcatccaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 23390214  T
Q  115 tgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||||||||||||||||||||||  ||||| | ||| |||||||||||| ||||| |||||||||||||| ||||||| ||||||||||  |||    
T  23390215 tgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaa 23390314  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | ||||||| | ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| |||||    
T  23390315 cagagtgccttgtta-gattttgtgacctttgttgcacgagttgtcgagagttgaaccttgggatagtattaagacttaatgaggatgt 23390402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 29 - 281
Target Start/End: Original strand, 36154461 - 36154713
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  36154461 atttcatgattttgacttttaagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctg 36154560  T
Q  129 gaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-tt 227  Q
    || ||||| ||||||  ||||||  ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |   ||||| |  |||| ||    
T  36154561 gatagattttagaataaaactttgagaatctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctatttacaga-atgcttgttt 36154659  T
Q  228 aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    ||| |||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  36154660 aggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagt 36154713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 8286471 - 8286748
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||| |||| |||||| |||||| ||||| |||| ||||| |||| ||||||||||||||||||||| |||||||||||||    
T  8286471 cagagagcatgcaagatttcgtgtttttgacttttgagttgaaccttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtagg 8286570  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||| ||           ||||| ||| || ||||||| |||  |||| |||||| ||||||||||||||||||||||||||||||    
T  8286571 atgagattgaacctggaatga-----------aacttgtgggattctgacctaaactagccatggcgagcagaggctctcgcctcgcgagtgacccagaa 8286659  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | |||||||| |||| ||||||||||||||  |||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  8286660 acagagtgacttgttagatttt-gcgacctttgttgcttgagttgttgagagttgaacctttgggtagtattaagacttaatgaagatgt 8286748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 29 - 281
Target Start/End: Original strand, 11580878 - 11581130
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||||||||| |||||| |||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  11580878 atttcgtgattttgacttttgagttgatccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 11580977  T
Q  129 gaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-tt 227  Q
    || ||||| ||||||  ||||||  ||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||   ||||| |  |||| ||    
T  11580978 gatagattttagaataaaactttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccatttacaga-atgcttgttt 11581076  T
Q  228 aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    ||| |||||||| |||||| | |||||| |||||||||||||||||||||||||    
T  11581077 aggattttgcgatctttgtcgtacgagtcgttgagagttgaaccttggggtagt 11581130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 296
Target Start/End: Complemental strand, 22075511 - 22075240
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  22075511 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtagg 22075412  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccag-a 211  Q
    |||| | ||||||||||| ||           ||||| || |  |||||||||||| |||||||||||| |||||||||||||||||||||||||||| |    
T  22075411 atgaaaatgaacctggaatga-----------aacttgtgaggttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 22075323  T
Q  212 aacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    ||||||| | ||||||||  |||||||||||||||||||||||||||||||  || |||||| |||||| ||| |||||||||||    
T  22075322 aacagagtgacttgttag--ttttgcgacctttgttgcacgagttgttgaggattaaacctttgggtagcattaagacttaatga 22075240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 26 - 299
Target Start/End: Original strand, 21292611 - 21292873
Alignment:
Q  26 aagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 125  Q
    ||||||||||  |||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21292611 aagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaac 21292710  T
Q  126 ctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtctt 224  Q
    ||||||           || ||||| |||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||| | |||    
T  21292711 ctggaa-----------ttaaacttgtggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgactt 21292799  T
Q  225 gttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatga 299  Q
     ||| | ||||||||||||||||||||||||||| | |||||| ||| | |||||| ||| ||||||||| ||||    
T  21292800 ttta-gattttgcgacctttgttgcacgagttgtcgggagttggacccttgggtaggattaagacttaataatga 21292873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 21871190 - 21871377
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||| ||||||||||||| || |||||||||||||||| |||||||    
T  21871190 agagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtagga 21871289  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||||||||||||||||| | ||| || ||||||| || ||||||||| || ||||| ||||||||||||||| || ||||||||    
T  21871290 tgagattgaacctggaaagattatggaa-tggacttttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgag 21871377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 21875470 - 21875657
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||| ||||||||||||| || |||||||||||||||| |||||||    
T  21875470 agagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtagga 21875569  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||||||||||||||||| | ||| || ||||||| || ||||||||| || ||||| ||||||||||||||| || ||||||||    
T  21875570 tgagattgaacctggaaagattatggaa-tggacttttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgag 21875657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 14 - 296
Target Start/End: Original strand, 22107002 - 22107273
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||| |||||||  |||| |||||| |||||| | ||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  22107002 cagagagcatgcaaaatttcgtatttttgacttttgagttgaactttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22107101  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    | ||||||||||||| ||           || ||||| ||| || ||||||||||| | ||| |||||| |||||||||||||||||||||||||| |||    
T  22107102 acgagattgaacctgaaa-----------ttaaacttgtgggattctgacctgaactcaccatggcgagcagaggctctcgcctcgcgagtgacccggaa 22107190  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    | |||| | ||||| |    |||||||||||||||||||||||||||||||| |||||||| | |||||||| |||||||||||    
T  22107191 atagagtgccttgtga-tactttgcgacctttgttgcacgagttgttgagagatgaacctttgagtagtattaagacttaatga 22107273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 22119811 - 22119998
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||| |||| |||||||| |||||| |||||| ||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  22119811 cagagagcatgcaaaattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22119910  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||||| | ||||||  |||||| | |||||||| |||||| ||||| |||||| ||||||||||||||||||||    
T  22119911 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 22119998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 202
Target Start/End: Original strand, 22959166 - 22959339
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||| ||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||||    
T  22959166 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 22959265  T
Q  129 gaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    || ||| | ||||| |||| |||||  | ||| |||||||| ||||| |||||||||||||||||||||||||||    
T  22959266 gagagactttagaa-tgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22959339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 24766955 - 24767142
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||| ||||||||||||||| ||||||  |||||| |||||| ||||| |||| ||||| ||||||||||||||||||| |||||| |||||||||||||    
T  24766955 cagatagcatgcaagatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtagg 24767054  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||| ||||||||| | ||||||  |||||| | |||||||| |||||| || || |||||| ||||||||||||||||||||    
T  24767055 atgagattgaatctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 24767142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 27 - 198
Target Start/End: Complemental strand, 21566034 - 21565863
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  21566034 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 21565935  T
Q  127 tggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcg 198  Q
    |||||||||| ||||| |||| ||| | ||||   |||||||| ||||| |||||| ||||||||||||||||    
T  21565934 tggaaagattttagaa-tgaattttcgtgaattgtacctgaactcgccatggcgagcagaggctctcgcctcg 21565863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 19660455 - 19660643
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| ||  |||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |     
T  19660455 cagagagcatgcaagattttgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtgga 19660554  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg--gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||| |||||||||||| | ||||||  ||  ||||  |||||| ||| |||| ||||| |||||| ||||||||||||||||||||    
T  19660555 atgagattaaacctggaaagact-tagaatgaaaactttggagaatctaacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 19660643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 67 - 275
Target Start/End: Complemental strand, 22144500 - 22144292
Alignment:
Q  67 ttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaacttttggaatctgacctga 166  Q
    |||||| ||||||||||||| ||| ||||||||||||||| | |||  |||||||||||||||||  |||  ||||| ||  ||| ||| |   ||||||    
T  22144500 ttttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatggatttttgggagttacacctga 22144401  T
Q  167 acacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagagt 265  Q
    || |||||  |||||||||||||||||||||||||||  |||||  ||||| |  |||| ||||| |||||||| |||||| ||||||||||||||||||    
T  22144400 actcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacaga-atgcttgtttaggattttgcgatctttgtcgcacgagttgttgagagt 22144302  T
Q  266 tgaaccttgg 275  Q
    ||||||||||    
T  22144301 tgaaccttgg 22144292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 197
Target Start/End: Complemental strand, 19669390 - 19669219
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||| || |||||||||||||||||||||||||||||| ||  | ||||||||||||     
T  19669390 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaacg 19669291  T
Q  127 tggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctc 197  Q
    |||||||| | ||||||  |  ||||| ||||   |||||||| ||||| |||| |||||||||||||||||    
T  19669290 tggaaagactttagaatgaattttttgtgaattgtacctgaactcgccatggcgtgtagaggctctcgcctc 19669219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 201
Target Start/End: Original strand, 21329127 - 21329300
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| || |||||||||| ||||| ||| |||||| |||||||||||||||| | |||||||| ||||| | |||  |||||||||||||    
T  21329127 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacct 21329226  T
Q  128 ggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcga 201  Q
    ||||  ||| ||| | |||| |||||| |  || || ||||| |||||  |||||||||||||||||||||||||    
T  21329227 ggaataatt-taggaatgaatttttgggagttgcacttgaactcgccatagcgagtagaggctctcgcctcgcga 21329300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 21498649 - 21498752
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||| ||| ||||| || |||||||||| ||||  ||| |||||| ||||||||||||| ||||||| ||||||| ||| |||||  |||||||||||||    
T  21498649 gattgcgtaattttgacctttaagttgaaccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacct 21498748  T
Q  128 ggaa 131  Q
    ||||    
T  21498749 ggaa 21498752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 58 - 202
Target Start/End: Original strand, 5888837 - 5888981
Alignment:
Q  58 cttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaacttttggaat 157  Q
    |||| ||| |||||| ||||||||| ||| | || |||||||||||||| |||||  ||||||||||| |||||   ||  |||||  | ||||  || |    
T  5888837 cttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacatggaatagtttaagaatgaatctttgtgagt 5888936  T
Q  158 ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
       |||||||| ||||| |||||||||||||||||||||||||||    
T  5888937 tgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 5888981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 20910430 - 20910477
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatcctta 61  Q
    |||||||||||||||||||||||||||| |||||| |||||| |||||    
T  20910430 cagagagcatgcaagatttcgtgattttgacttttgagttgaacctta 20910477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 21294892 - 21295006
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  21294892 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 21294991  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  21294992 gacaagattgaacct 21295006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 15441583 - 15441696
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  15441583 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 15441682  T
Q  113 gatgagattgaacc 126  Q
    ||  ||||||||||    
T  15441683 gacaagattgaacc 15441696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 21501919 - 21501968
Alignment:
Q  161 acctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccag 210  Q
    |||||||| |||||  ||||||||||||||||||||||||||| ||||||    
T  21501919 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccag 21501968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 20026706 - 20026746
Alignment:
Q  163 ctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  20026706 ctgaactcgccacagcgagtagaggctctcgcctcgcgagt 20026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 41294124 - 41294176
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||||| ||| || |||||||||| ||||||||||| ||||||||||    
T  41294124 tgcctgaacatgcctagtattgattaggaatgaatgtaggatcagattgaacc 41294176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 20026514 - 20026592
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 125  Q
    |||||| |||| ||| ||| |||||| ||||||||||||| |||||||||||||| |||  | |||  |||||||||||    
T  20026514 ttaagtcgatctttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaac 20026592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 24555010 - 24554896
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||| ||  ||| ||||||||||||| ||||||||    
T  24555010 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaatatacctagtaatgattaggaatgaatgtag 24554911  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  24554910 gacaagattgaacct 24554896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 25406847 - 25406789
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||| |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  25406847 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 25406789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 25535409 - 25535351
Alignment:
Q  69 ttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||| |||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  25535409 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 25535351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 25744074 - 25744036
Alignment:
Q  164 tgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  25744074 tgaactcgccatggcgagtagaggctctcgcctcgcgag 25744036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 280
Target Start/End: Original strand, 26740472 - 26740530
Alignment:
Q  222 cttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtag 280  Q
    ||||||||| |||||||| |||||| ||| ||| ||||| ||||||| |||||||||||    
T  26740472 cttgttagggttttgcgatctttgtcgcaagagatgttgtgagttgatccttggggtag 26740530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 21741308 - 21741345
Alignment:
Q  161 acctgaacacgccacggcgagtagaggctctcgcctcg 198  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  21741308 acctgaactcgccatggcgagtagaggctctcgcctcg 21741345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 22588516 - 22588459
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 125  Q
    ||||| |||||||||||  ||| || |||||||||| ||||||||||| |||||||||    
T  22588516 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaac 22588459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 23336973 - 23337030
Alignment:
Q  69 ttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||| |||||||||||  ||| ||||||||||||| ||||||||||  ||||||||||    
T  23336973 ttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 23337030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 17284482 - 17284430
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  17284482 tgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 17284430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 22120033 - 22120085
Alignment:
Q  235 tgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgag 287  Q
    ||||| |||||| ||||||||||||  ||||||||||||||| ||||| ||||    
T  22120033 tgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgag 22120085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 25808115 - 25808215
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    ||||||||||||  |||||| ||  |||  |||||| |||||  ||||  |||| || ||||||||||||||  ||| ||||||||||||| ||||||||    
T  25808115 gcagagagcatgttagattttgtattttcgactttttagttggaccttgaatgccttagaatgcctgaacatacctagtaatgattaggaatgaatgtag 25808214  T
Q  113 g 113  Q
    |    
T  25808215 g 25808215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 226; Significance: 1e-124; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 34510283 - 34509995
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34510283 cagagagcttgcaagatttcgtgattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 34510184  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  34510183 atgagattgaacctggaaagattgtagaat-gaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaa 34510085  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34510084 acagagtgtcatgttaggtttttgcgacctttgttgcacgagttgttgagggttgaaccttggggtagtattgagacttaatgatgatgt 34509995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 22532772 - 22532484
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| | |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22532772 cagagagcatgcaagatttcgtgattttgacttttgatttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22532673  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||| ||||||||||| |||||||||||| |||||| ||||| |||||||| ||| ||||||||||||||||||||||||||| ||    
T  22532672 atgagattgaacctggaaggattgtagaat-gaacttttggaaatctgacttgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccaaaa 22532574  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  22532573 acagagtgacttgttaggattttgcgacctttgttgcacgagctgttgagagttgaaccttgaggtagtattgagacttaatgatgatgt 22532484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 50209832 - 50210119
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| |||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||     
T  50209832 cagagagcatgcaagattttgtgattttgacttttgagttgatc-ttatatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 50209930  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||| ||||||  |||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  50209931 atgagattgaacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 50210029  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50210030 acagagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaacctttgggtagtattgagacttaatgatgatgt 50210119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 22354190 - 22354478
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| |||||| |||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||| || |||||    
T  22354190 cagagagcatgcaagattttgtgattttgacttttgagttgaaccttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtagg 22354289  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||| ||||||||||||  ||||| | ||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  22354290 atgagattgaacctggatagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcaagtgacccagaa 22354389  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||||||| |||||||||  ||||||||| ||||||||||| |||||    
T  22354390 acagagtgacttgttagg-ttttgcgacctttgttgcacgagttgttgagaattgaacctttaggtagtattaagacttaatgaggatgt 22354478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 15 - 280
Target Start/End: Complemental strand, 433509 - 433244
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||| ||||||||| ||||||||| |||||| |||||||||||| |||||||||| || ||||||||||||| |||||||||||||||||||||| |    
T  433509 agagagcttgcaagattccgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaa 433410  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaac 214  Q
    |||||||||||||||||||||| ||||||  |||||| |||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||   |    
T  433409 tgagattgaacctggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttgc 433310  T
Q  215 agagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtag 280  Q
    | | |  |||| ||||| |||||||| |||||| |||||||| ||||||||||||||||||||||||    
T  433309 a-aaatgcttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtag 433244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 14 - 298
Target Start/End: Complemental strand, 20135690 - 20135406
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||| |||| || ||||| |||||| |||| ||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  20135690 cagagagcatgcaatattttgtaattttgacttttgagtttatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagg 20135591  T
Q  114 atgagattgaacctggaaagattgtagaattgaac-ttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccaga 211  Q
    ||||||||| ||||||||||| | ||||||  ||| |||||||| ||||||| |||| ||||| |||||| ||| |||||| |||||||||| |||||||    
T  20135590 atgagattggacctggaaagact-tagaatgaaacattttggaattctgacc-gaactcgccatggcgagcagaagctctcacctcgcgagtaacccaga 20135493  T
Q  212 aacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatg 298  Q
    ||||||| | |||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||| | |||| ||||||||    
T  20135492 aacagagtgacttgttaggtttatgcgacctttgttgtacgagttgttgagagttgaaccttagggtagtagtaagacctaatgatg 20135406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 14 - 296
Target Start/End: Original strand, 27250358 - 27250629
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| || || |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27250358 cagagagcatgcaagatttcgtaatattgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 27250457  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||| |||||||||||||| ||           | || | ||| |||||||||||| ||||||| |||| |||||||||||||||||||||||| ||||||    
T  27250458 atgggattgaacctggaatga----------aacctgtgggattctgacctgaactcgccacgtcgagcagaggctctcgcctcgcgagtgacacagaaa 27250547  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    |||||   |||||||   ||||||||||||||||||||||||||| |||||||||||||| |||||| ||||| |||||||||    
T  27250548 cagagtcccttgtta-tattttgcgacctttgttgcacgagttgtcgagagttgaacctttgggtagcattgatacttaatga 27250629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 296
Target Start/End: Original strand, 20846848 - 20847119
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| || ||| |||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  20846848 cagagagcatgcaagattttgtaattttgacctttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtagg 20846947  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||| ||           ||||| || |  | |||||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  20846948 atgagattgaacctggaatga-----------aacttgtgaggttttgacctgaactcgccacggcgagcagaggctcttgcctcgcgagtgacccagaa 20847036  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    |||||| | ||||||| | |||||||||||||||||||||||||||||||  || |||||| |||||| ||| |||||||||||    
T  20847037 acagagtgacttgtta-gattttgcgacctttgttgcacgagttgttgaggattaaacctttgggtagcattaagacttaatga 20847119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 22355803 - 22356080
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||| ||||||||||||| | ||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22355803 cagagaacatgcaagatttcataattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22355902  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||||||||||| ||      ||||    | | ||| |||||||||||| |||||||||||| ||||||| |||| |||||||||||| |||||    
T  22355903 atgagattgaacctggaatga------aatt----tgtgggattctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaa 22355991  T
Q  214 cagagagtc-ttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | | |||||| | ||||| ||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||    
T  22355992 cagagtgacattgtta-gattttgagacctttgttgcacgagttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 22356080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 22357489 - 22357766
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||| ||||||||||||| | ||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22357489 cagagaacatgcaagatttcataattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22357588  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||||||||||| ||      ||||    | | ||| |||||||||||| |||||||||||| ||||||| |||| |||||||||||| |||||    
T  22357589 atgagattgaacctggaatga------aatt----tgtgggattctgacctgaactcgccacggcgagcagaggct-tcgcatcgcgagtgacctagaaa 22357677  T
Q  214 cagagagtc-ttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | | |||||| | ||||| ||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||    
T  22357678 cagagtgacattgtta-gattttgagacctttgttgcacgagttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 22357766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 296
Target Start/End: Complemental strand, 21027172 - 21026901
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||| || || ||||| || ||| |||||||||||| |||||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  21027172 cagagagcatgcaagaatttgtaattttgacctttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtagg 21027073  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||| ||           ||||| || |  |||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  21027072 atgagattgaacctggaatga-----------aacttgtgaggttctgacctaaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 21026984  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    ||| || | ||||||| | |||||||||||||||||||||||||||||||  || |||||| |||||| ||| |||||||||||    
T  21026983 acaaagtgacttgtta-gattttgcgacctttgttgcacgagttgttgaggattaaacctttgggtagcattaagacttaatga 21026901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 14 - 299
Target Start/End: Original strand, 38801020 - 38801294
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||| |  |||| |||||| |||||| | ||| |||  ||||| ||||||||||||||||||||||||||||||||||||||||    
T  38801020 cagagagcatgcaagatttcatatttttgacttttgagttgaactttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 38801119  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||| ||||||||||||||           |||||||| ||| || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  38801120 atgtgattgaacctggaa-----------ttgaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaa 38801208  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatga 299  Q
    |||||| | ||||||| | ||||||||||||||||| ||||||||| |  ||||||||| | |||||| ||| ||||||||| ||||    
T  38801209 acagagtgacttgtta-gattttgcgacctttgttgtacgagttgtcggaagttgaacccttgggtaggattaagacttaataatga 38801294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 20919104 - 20918917
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||  | ||||| || ||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  20919104 cagagagcatgcaagattttataattttgacctttgagttgatccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 20919005  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||| ||||| | ||||||| || ||| | |||||||| |||||| ||||| |||||| ||||||||||||||||||||    
T  20919004 atgagattgaacctgaaaagact-tagaatttaaatttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 20918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 27 - 210
Target Start/End: Complemental strand, 33681499 - 33681316
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||| | |||||| |||||||||||||||||||||||| || || |||||||||||||    
T  33681499 agatttcgtaattttgacttttgagttgatccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaacc 33681400  T
Q  127 tggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccag 210  Q
    |||||||||| ||||| |||| ||||| || |   |||||||| ||||| |||||| ||||||||||||||||||| | ||||||    
T  33681399 tggaaagattttagaa-tgaatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccag 33681316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 27 - 201
Target Start/End: Original strand, 52927612 - 52927786
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||| ||||| ||| |||||| |||||||||||||||||||||||||| |||||| || || |||||||||||||    
T  52927612 agatttcgtaattttgacttttgagttgacccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaacc 52927711  T
Q  127 tggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcga 201  Q
    |||||||||| | ||| |||| ||||  || |  ||||||||| ||||| ||||||||||||| ||||||||||||    
T  52927712 tggaaagattttggaa-tgaattttttaaagttagacctgaactcgccatggcgagtagaggccctcgcctcgcga 52927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 21754525 - 21754350
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||  |||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| || || | |||||||||||    
T  21754525 agatttcgtatttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaacc 21754426  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    ||| |||| | ||||| |||| |||||  | ||| |||||||| ||||| |||||| |||||||||||||||||||||    
T  21754425 tgggaagactttagaa-tgaa-ttttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 21754350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 21301157 - 21301245
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaa 103  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  21301157 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 37 - 202
Target Start/End: Complemental strand, 20248757 - 20248592
Alignment:
Q  37 attttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatt 136  Q
    ||||| |||||| ||||||||| || ||| |||||| |||||||||||||||||||||||||||||||||  | || ||||||||||||||||| ||| |    
T  20248757 attttgacttttgagttgatccatagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctggagagact 20248658  T
Q  137 gtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
     ||||| |||| |||||  | ||| |||||||| ||||| |||||||||||||| ||||||||||||    
T  20248657 ttagaa-tgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctatcgcctcgcgag 20248592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 22238117 - 22237946
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||| ||||| |||||| |||||||||||| ||  |||||| |||||||||||||||||||||| |||||||||| || || |||||||| ||||||    
T  22238117 atttcgtaattttgacttttgagttgatccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctg 22238018  T
Q  129 gaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcga 201  Q
    |||||||| | ||| |||| |||  || |   || ||||| ||||| ||||||||||||| ||||||||||||    
T  22238017 gaaagattttggaa-tgaattttgtgagttgcacttgaactcgccatggcgagtagaggccctcgcctcgcga 22237946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 20091092 - 20091281
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||| |  |||| |||||| |||| | ||||| |||| ||||| ||||||||||||||||||| |||||||||  ||||||| |    
T  20091092 cagagagcatgcaagatttcttatttttgacttttgagttaaaccttagatgcctttgattgcctgaacatgtctaatattgattaggagtgaatgtaag 20091191  T
Q  114 atgagattgaacctggaaagattgtagaattgaac--ttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||| ||||| ||||| | ||||||  |||   || ||| |||||||||||| ||||| |||||| ||| | |||| |||||||||    
T  20091192 atgagattggacctgaaaagact-tagaatgaaacaacttgggattctgacctgaactcgccatggcgagcagatgttctcacctcgcgag 20091281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 21162231 - 21162117
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||| |||||| || ||| ||||| |||||||||| |||||||| | ||||||||| |||| |||||||||||||     
T  21162231 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtaga 21162132  T
Q  114 atgagattgaacctg 128  Q
    |||||||||||||||    
T  21162131 atgagattgaacctg 21162117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 201
Target Start/End: Original strand, 22921499 - 22921672
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| || ||| |||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||| || ||  ||||||||||||     
T  22921499 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacca 22921598  T
Q  128 ggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcga 201  Q
    ||||   ||  ||||  ||| ||||| || |  ||| ||||| ||||| ||||||||||||||||||||||||||    
T  22921599 ggaatagtttaagaa-cgaatttttgagagttagacttgaactcgccatggcgagtagaggctctcgcctcgcga 22921672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 43697849 - 43697746
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| ||||||||||||| ||||| ||| |||||| |||||||||||||||| | |||||||| ||||| | |||  ||||||| |||||    
T  43697849 gatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacct 43697750  T
Q  128 ggaa 131  Q
    ||||    
T  43697749 ggaa 43697746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 16758942 - 16758890
Alignment:
Q  226 ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggt 278  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||||||||||    
T  16758942 ttaggattttgcgatctttgtcgcacgagttgttgagagttgaaccttggggt 16758890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 21342384 - 21342332
Alignment:
Q  226 ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggt 278  Q
    |||||||||||||| | |||| |||||||||||||||||||||||||||||||    
T  21342384 ttaggtttttgcgatcgttgtcgcacgagttgttgagagttgaaccttggggt 21342332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 21347249 - 21347197
Alignment:
Q  226 ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggt 278  Q
    |||||||||||||| | |||| |||||||||||||||||||||||||||||||    
T  21347249 ttaggtttttgcgatcgttgtcgcacgagttgttgagagttgaaccttggggt 21347197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 280
Target Start/End: Complemental strand, 26065295 - 26065176
Alignment:
Q  162 cctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttg 260  Q
    ||||||| |||||  |||||||||||||||||||||||||||  |||||  |||||    |||| ||||| |||||||| |||||| ||||||| ||||     
T  26065295 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaataccttgtttagggttttgcgatctttgtcgcacgagatgtta 26065196  T
Q  261 agagttgaaccttggggtag 280  Q
     ||||| | |||||||||||    
T  26065195 tgagtttatccttggggtag 26065176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 21895883 - 21895965
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 129  Q
    ||||||||||| ||| ||| || ||| |||||||||| || ||||||||||||||||||  | |||  |||||||||||||||    
T  21895883 ttaagttgatctttagatgattatgagtgcctgaacaagtataataatgattaggaaagtttttagattgagattgaacctgg 21895965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 23763688 - 23763574
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  23763688 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 23763589  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  23763588 gacaagattgaacct 23763574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 19063997 - 19063884
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| |||| || |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  19063997 gcagagagcatgtaagattttgcaatttcaactctttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 19063898  T
Q  113 gatgagattgaacc 126  Q
    ||  ||||||||||    
T  19063897 gacaagattgaacc 19063884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 19111887 - 19111774
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| |||| || |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  19111887 gcagagagcatgtaagattttgcaatttcaactctttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 19111788  T
Q  113 gatgagattgaacc 126  Q
    ||  ||||||||||    
T  19111787 gacaagattgaacc 19111774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 20637206 - 20637165
Alignment:
Q  161 acctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  20637206 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 20637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 22468315 - 22468400
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgatta 99  Q
    ||||||||||| ||||||||||  |||| |||||| |||||| ||||| ||| |||||| |||||||| ||| ||| ||| |||||    
T  22468315 cagagagcatgtaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 22468400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 202
Target Start/End: Original strand, 28194098 - 28194254
Alignment:
Q  46 tttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattg 145  Q
    ||||||| || ||||  ||| |||||| ||||||||| ||| | || |||||||||||||| |||||  |||||||||||||| ||   ||  |||||      
T  28194098 tttaagtcgaaccttggatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgaaatagtttaagaatga 28194197  T
Q  146 aacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    | ||||  || |   |||||||| ||||| ||| |||||||||||||||||||||||    
T  28194198 atctttgtgagttgcacctgaactcgccatggcaagtagaggctctcgcctcgcgag 28194254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 20524899 - 20524958
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    ||||| |||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  20524899 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 20524958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 21438216 - 21438157
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    ||||| |||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  21438216 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 21438157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 21861145 - 21861227
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 129  Q
    ||||||||||| ||| ||| || ||| |||||||||| || |||||||||||||| |||  | |||  |||||||||||||||    
T  21861145 ttaagttgatctttagatgattctgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgg 21861227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 27653052 - 27653106
Alignment:
Q  226 ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtag 280  Q
    ||||| |||||||| |||||||||||||| ||||  ||||||| |||||||||||    
T  27653052 ttagggttttgcgatctttgttgcacgagatgttatgagttgatccttggggtag 27653106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 282
Target Start/End: Original strand, 35260860 - 35260966
Alignment:
Q  177 gcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttgg 275  Q
    |||||||||||| ||||||||||||||  |||||  ||| |    |||| ||||| |||||||| |||||| ||||||| ||||  ||||||||| ||||    
T  35260860 gcgagtagaggccctcgcctcgcgagtttcccagttacaaaataccttgcttaggattttgcgatctttgtcgcacgagatgttatgagttgaacattgg 35260959  T
Q  276 ggtagta 282  Q
    |||||||    
T  35260960 ggtagta 35260966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 35981357 - 35981419
Alignment:
Q  67 ttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 129  Q
    |||||| ||||||||| ||| | || |||||||||||||| |||||  |||||||||||||||    
T  35981357 ttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgg 35981419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 19105230 - 19105117
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  |||| ||||||| |||||  ||||   ||  ||||| ||||| |||||  ||| ||||||||||||| ||||||||    
T  19105230 gcagagagcatgtaagattttgcaatttcaactttttagttggaccttgagtgactttgagtgcctaaacatacctagtaatgattaggaatgaatgtag 19105131  T
Q  113 gatgagattgaacc 126  Q
    ||  ||||||||||    
T  19105130 gacaagattgaacc 19105117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 35981451 - 35981492
Alignment:
Q  161 acctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||| ||||| || ||||||||||||||||||||||||    
T  35981451 acctgaactcgccatggtgagtagaggctctcgcctcgcgag 35981492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 280
Target Start/End: Original strand, 52940708 - 52940761
Alignment:
Q  227 taggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtag 280  Q
    ||||||||||||| |||||| ||||||| ||||  ||||||| |||||||||||    
T  52940708 taggtttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 52940761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 40213339 - 40213627
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40213339 cagagagcttgcaagatttcgtgattttgacttttgagttgatcattagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 40213438  T
Q  114 atgagattgaacctggaaagattgtagaattgaactttt-ggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  40213439 atgagattgaacctggaaagattgtagaa-tgaacttttgggaatctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 40213537  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40213538 acagagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagtttaaccttggggtagtattgagacttaatgatgatgt 40213627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 18439037 - 18438749
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||      
T  18439037 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaa 18438938  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||| ||||||  |||||||||||| ||||||||||   ||||||||||| ||||||||||||||||||||||||||||||    
T  18438937 atgagattgaacctggaaagatt-tagaatgaaacttttggaattctgacctgaagttgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 18438839  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18438838 acagagtgtcttgttaggtttttgcgacctttgttgcacgagttgttgagtgttgaaccttggggtagtattgagacttaatgatgatgt 18438749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 11424381 - 11424669
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||     
T  11424381 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtaga 11424480  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||| ||||||  ||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||    
T  11424481 atgagattgaacctggaaagatt-tagaatgaaactttttgaactctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagcgacctagaa 11424579  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  11424580 acagagtgtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaactttggggtagtattgagacttaatgttgatgt 11424669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 25476003 - 25476291
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||||| ||| |||||| | |||||||||||||||||||||||| ||||||||||||     
T  25476003 cagagagcatgcaagattttgtgattttgacttttgagttgatccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtaga 25476102  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||| ||||||||||||||| ||||||  ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  25476103 atgagatcgaacctggaaagattttagaatgaaacttttggaatctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaa 25476202  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  25476203 cagagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaaccttgaggtagtattgagacttaatgaggatgt 25476291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 26687390 - 26687102
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  26687390 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtagg 26687291  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||||||||||  ||||| | ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  26687290 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 26687191  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| ||||||||||| |||| ||||||||||||||||| | |||||||||||||| |||||||||||||| |||||||||| |||||    
T  26687190 acagagtgtcttgttagg-ttttacgacctttgttgcacgaatcgttgagagttgaactttggggtagtattgggacttaatgaggatgt 26687102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 17 - 302
Target Start/End: Complemental strand, 14573088 - 14572803
Alignment:
Q  17 agagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatg 116  Q
    |||||||||||||||| ||| |||| |||||| |||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  14573088 agagcatgcaagattttgtgtttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatg 14572989  T
Q  117 agattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaaca 215  Q
    |||||||||||||||||| | ||||||  ||| ||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||    
T  14572988 agattgaacctggaaagact-tagaatgaaacctttggaaatctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctagaaaca 14572890  T
Q  216 gagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14572889 gagtaccttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattaagacttaatgatgatgt 14572803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 14576451 - 14576739
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||| ||||| |||||||||||||||||| |||||||| |||||||||||     
T  14576451 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtaga 14576550  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||| |||||||||||||||| | ||||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14576551 atgacattgaacctggaaagact-tagaatgaaacctttggaaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacctagaa 14576649  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||| || | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  14576650 acaaagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattaagatttaatgatgatgt 14576739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 14973357 - 14973069
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  14973357 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 14973258  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||| |||| | ||||||| |||||  ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||    
T  14973257 atgagattaaaccagaaaagattttagaaa-gaacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaa 14973159  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||||| ||||||||  | ||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  14973158 acagagtgccttgttaggattttgcgatttgtgtcgcacaagttgctaagagttgaaccttggggtagtattgagacttaatgatgatgt 14973069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 17488359 - 17488071
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||| ||| |||||| || ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  17488359 agagagcatgcaagatttcgtgaatttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 17488260  T
Q  115 tgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccag-aa 212  Q
    |||||||||||||||||||||||||||||  ||||| | ||| |||||||||||  |||||||||||| ||||||||||||||||||||||||| || ||    
T  17488259 tgagattgaacctggaaagattgtagaatgaaacttgtaggattctgacctgaaatcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaa 17488160  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||    
T  17488159 acagagtgccttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 17488071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 17499841 - 17499553
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    |||||| |||||||||||| ||||||| |||||| || ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  17499841 agagagaatgcaagatttcatgattttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 17499742  T
Q  115 tgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccag-aa 212  Q
    |||||||||||||||||||||||||||||  ||||| ||||| |||||||||||  |||||||| ||| ||||||||||||||| | ||||||| || ||    
T  17499741 tgagattgaacctggaaagattgtagaatgaaacttgttggattctgacctgaattcgccacggtgagcagaggctctcgcctctctagtgacctagaaa 17499642  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||    
T  17499641 acagagtgccttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 17499553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 23082979 - 23083267
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||  |||||| |||||||| |||||| |||||||||||| |||||||||| |||||| | |||||||||| ||||||||| | ||||||||    
T  23082979 cagagagcatgtcagattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtagg 23083078  T
Q  114 atgagattgaacctggaaagattgtagaattgaac-ttttggaatctga-cctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccaga 211  Q
    ||||||||| ||||||||||||| ||||||  ||| ||||||| ||||| ||| ||| ||||| |||||||||||||||||||||||||| |||||||||    
T  23083079 atgagattggacctggaaagatt-tagaatgaaactttttggattctgacccttaactcgccatggcgagtagaggctctcgcctcgcgaatgacccaga 23083177  T
Q  212 aacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||| || ||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||| |||||||||    
T  23083178 aacatagtgtcttgttagg-ttttgcgacctttgttgcacgagttgttcagagttgaaccttgaggtagtattaagacttagtgatgatgt 23083267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 66 - 302
Target Start/End: Complemental strand, 13442725 - 13442489
Alignment:
Q  66 cttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacct 164  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||| | ||| ||||||||    
T  13442725 cttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacct 13442626  T
Q  165 gaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagag 264  Q
    ||||  ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| | ||||||||||||||||||||||||||| |||||    
T  13442625 gaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagttgtcgagag 13442527  T
Q  265 ttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||||||||| |   ||| |||||||||||||||||    
T  13442526 ttgaaccttgggatgacattaagacttaatgatgatgt 13442489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 14 - 278
Target Start/End: Original strand, 17247904 - 17248168
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||  ||||||||||||||||||| |||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||     
T  17247904 cagagaggttgcaagatttcgtgattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 17248003  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||||||||||||||| ||||||  |||||| |||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||  |    
T  17248004 atgagattgaacctggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagtta 17248103  T
Q  214 cagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggt 278  Q
    |||| |  |||| ||||  |||||||| |||||| |||||||| |||||||||| |||||||||||    
T  17248104 caga-atgcttgtttagaattttgcgatctttgtcgcacgagtcgttgagagttaaaccttggggt 17248168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 20698065 - 20698342
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| |||||| |||||| ||||| |||||||||| || |||||||||||||||||||||||||||||||||||||    
T  20698065 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagg 20698164  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||| ||           ||||| ||| || ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  20698165 atgagattgaacctggaatga-----------aacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 20698253  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||| | ||||||||||||||| ||||||||||| |||||||||||||| || ||| ||| |||||||||||||||||    
T  20698254 acagagtgacttgtta-gattttgcgacctttgtggcacgagttgtcgagagttgaacctttggatagaattaagacttaatgatgatgt 20698342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 281
Target Start/End: Original strand, 53070321 - 53070583
Alignment:
Q  18 gagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatga 117  Q
    |||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  53070321 gagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatga 53070420  T
Q  118 gattgaacctggaaagattgtagaattgaac-ttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacag 216  Q
    |||||||||||||   |||  |||| ||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||  ||||   ||||    
T  53070421 gattgaacctggattaatt-aagaa-tgaactttttggaagctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacag 53070518  T
Q  217 agagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    | || |||| ||||| |||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  53070519 a-agccttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagt 53070583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 12340255 - 12340068
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  12340255 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 12340156  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||||| | ||||||  |||||| | |||||| | |||||| ||||| |||||| ||||||||||||||||||||    
T  12340155 atgagattgaacctggaaagact-tagaatgaaactttggagaatct-aactgaactcgccatggcgagcagaggctctcgcctcgcgag 12340068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 119 - 302
Target Start/End: Complemental strand, 43841330 - 43841147
Alignment:
Q  119 attgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacaga 217  Q
    |||||||||||||||||||||||||  ||||| |||||| ||||||||||| |||||| ||||| | |||| ||||||||||||||||||||||||||||    
T  43841330 attgaacctggaaagattgtagaatgaaacttgtggaattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacccagaaacaga 43841231  T
Q  218 gagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    | ||||||||||| |||||||||||||||| ||||||||||||||||||  || |||||||||||||| ||||||| || |||||    
T  43841230 gtgtcttgttagg-ttttgcgacctttgttacacgagttgttgagagtttgactttggggtagtattgggacttaacgaggatgt 43841147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 30030331 - 30030054
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| | ||| |||||| |||||| ||||| |||| ||||| || ||||||||||||||||||||||| |||||||||| ||    
T  30030331 cagagagcatgcaagatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtggg 30030232  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtga-cccaga 211  Q
    |||||||||||||||||| ||      ||  |    ||||||| |||||||| ||| ||||| |||||| ||||||||||||||||||||| | |||||     
T  30030231 atgagattgaacctggaatga------aacag----tttggaattctgacct-aactcgccatggcgagcagaggctctcgcctcgcgagtaatcccag- 30030144  T
Q  212 aacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||||  | ||||||| | ||||||||||||||||||||||||||| |||||||||||||| ||||||  || |||||||||||||||||    
T  30030143 aacagaatgccttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaacctttgggtagctttaagacttaatgatgatgt 30030054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 14 - 260
Target Start/End: Complemental strand, 12399698 - 12399466
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||| |||||| || ||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| ||| ||||    
T  12399698 cagagagcatgctagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatatagg 12399599  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||| | |||||||||||| ||           ||||| || |  |||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  12399598 atgggtttgaacctggaatga-----------aacttgtgaggttctgacctgaactcgccacggcgagtaaaggctctcgcctcacgagtgacccagaa 12399510  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttg 260  Q
    |||| ||  ||||||||  |||| ||||||||||||||||||||||||    
T  12399509 acagtga--cttgttag--ttttccgacctttgttgcacgagttgttg 12399466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 14669263 - 14669076
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||| |||   |||| ||||||||||||||||||| ||| ||||||||||||||||    
T  14669263 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatgtctaatattgaataggaaagaatgtagg 14669164  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||||| | ||||||  |||||| | |||||||| |||||| ||||| |||||| |||||||||| |||||||||    
T  14669163 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcacctcgcgag 14669076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 12851984 - 12852169
Alignment:
Q  16 gagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggat 115  Q
    |||||||||||||||||||||||||| |||||| |||| | | ||| ||||  |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  12851984 gagagcatgcaagatttcgtgattttgacttttgagtttaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggat 12852083  T
Q  116 gagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||| ||||||||| | ||||||  ||||||||  ||||||| |||||| ||||| |||||| ||||||||| ||||||||||    
T  12852084 gagattgaatctggaaagact-tagaatgaaacttttgataatctga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 12852169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 14666108 - 14665921
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||  ||||||| |||||| |||||| ||||| |||   |||| |||||||||||| |||||| ||||||||||||||||||||    
T  14666108 cagagagcatgcaagattttatgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtagg 14666009  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||||| | ||||||  |||||| | |||||||| |||||| ||| | |||||| ||||||||||||||||||||    
T  14666008 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgcaatggcgagcagaggctctcgcctcgcgag 14665921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 14735621 - 14735434
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||  ||||||| |||||| |||||| ||||| |||   |||| |||||||||||| |||||| ||||||||||||||||||||    
T  14735621 cagagagcatgcaagattttatgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtagg 14735522  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||||| | ||||||  |||||| | |||||||| |||||| ||| | |||||| ||||||||||||||||||||    
T  14735521 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgcaatggcgagcagaggctctcgcctcgcgag 14735434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 43842681 - 43842572
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  43842681 cagagagcatgcaagatttcatgattttgactttttagttgatccttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgtagg 43842582  T
Q  114 atgagattga 123  Q
    ||||||||||    
T  43842581 atgagattga 43842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 14179825 - 14179705
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  14179825 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 14179726  T
Q  114 atgagattgaacctggaaaga 134  Q
    |||||||||||| ||||||||    
T  14179725 atgagattgaacttggaaaga 14179705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 16097820 - 16097645
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||| || |||||||||||||||||| ||||||||||| || || |||||||||||||    
T  16097820 agatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaacc 16097721  T
Q  127 tggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    || ||||||| ||||| |||| ||||| ||||  ||||||||| ||||| || ||||||||||||||||||||||||    
T  16097720 tgaaaagattttagaa-tgaatttttgtgaattggacctgaactcgccatggtgagtagaggctctcgcctcgcgag 16097645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 13209946 - 13210133
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| ||||| |||||||||||| ||||||||||||||| ||||     
T  13209946 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctaat-atgattaggaaagaaagtaga 13210044  T
Q  114 atgagattgaacctggaaagattgtagaat-tgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||||| | ||||||   |||| ||| |||| ||||| |||| ||||| |||||||||||||||||||||||||||    
T  13210045 atgagattgaacctggaaagact-tagaatgaaaactcttgagaatgtgacc-gaactcgccatggcgagtagaggctctcgcctcgcgag 13210133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 12933941 - 12934117
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||  |||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |  || |||||||||||||    
T  12933941 agatttcgtacttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacc 12934040  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    |||||||||| ||||| |||| |||||  | ||| |||||||| ||||| |||||| |||| ||||||||||||||||    
T  12934041 tggaaagattttagaa-tgaaattttgtgaactgaacctgaactcgccatggcgagcagagactctcgcctcgcgagt 12934117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 32308158 - 32307983
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||| || || |||||||||||||    
T  32308158 agatttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaacc 32308059  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    | | |||| | ||||| |||| |||||| | ||| |||||||| ||||| |||||| |||||||||||||||||||||    
T  32308058 taggaagactttagaa-tgaa-ttttgggaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 32307983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 199
Target Start/End: Original strand, 49389275 - 49389446
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  49389275 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 49389374  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgc 199  Q
    |||| ||| | ||||| |||| |||||  | ||| |||||||| ||||| |||||| ||||| |||||||||||    
T  49389375 tggagagactttagaa-tgaa-ttttgtgaactgaacctgaactcgccatggcgagcagaggttctcgcctcgc 49389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 49667715 - 49667890
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||  |||| |||||| |||||||||||| ||| ||||||  |||||||||||||||||||||||||||||||| |  || |||||||||||||    
T  49667715 agatttcgtacttttgacttttgagttgatccttagatg-ttttgagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacc 49667813  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    |||||||||| ||||| |||| | |||  | ||| |||||||| ||||| |||||| |||||||||||||||||||||    
T  49667814 tggaaagattttagaa-tgaaatattgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 49667890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 9513384 - 9513228
Alignment:
Q  43 acttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaa 142  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |  || ||||||||||||||| ||||||| |||||    
T  9513384 acttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaa 9513285  T
Q  143 ttgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcg 198  Q
    |  || ||||| |||    |||||||| | ||| |||||| ||||||||||||||||    
T  9513284 tgaaatttttgtgaactaaacctgaactcaccatggcgagcagaggctctcgcctcg 9513228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 43 - 198
Target Start/End: Complemental strand, 9521359 - 9521203
Alignment:
Q  43 acttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaa 142  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |  || ||||||||||||||| ||||||| |||||    
T  9521359 acttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaacctgaaaagattttagaa 9521260  T
Q  143 ttgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcg 198  Q
    |  || ||||| |||    |||||||| | ||| |||||| ||||||||||||||||    
T  9521259 tgaaatttttgtgaactaaacctgaactcaccatggcgagcagaggctctcgcctcg 9521203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 17247142 - 17247236
Alignment:
Q  18 gagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||| ||||||||||||||||||| |||||| |||||||||||| ||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  17247142 gagcttgcaagatttcgtgattttgacttttgagttgatccttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgtag 17247236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 1644314 - 1644489
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||  ||| |||||| ||||||||||||||| ||||||||||||||||| |  || |||||||||||||    
T  1644314 agatttcgtaattttgacttttgagttgatccttggatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaacc 1644413  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    ||  |||| | ||||| |||| |||||  | ||| |||||||| ||||| |||||| |||||||||||||||||||||    
T  1644414 tgagaagactttagaa-tgaa-ttttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 1644489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 134
Target Start/End: Original strand, 4588457 - 4588553
Alignment:
Q  38 ttttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaaga 134  Q
    |||| |||||| |||||| ||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  4588457 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctgtaaaga 4588553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 16809887 - 16809775
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||| |||||||||  |||| |||||| |||||| ||||| |||||||||| ||| |||||||    ||||||||||||||||||||||||||    
T  16809887 agagagcatgctagatttcgtatttttgacttttgagttgaaccttaaatgcttttgagtgcttgaacat----aataatgattaggaaagaatgtagga 16809792  T
Q  115 tgagattgaacctggaa 131  Q
    ||||||||| |||||||    
T  16809791 tgagattgatcctggaa 16809775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 291
Target Start/End: Complemental strand, 42386767 - 42386637
Alignment:
Q  161 acctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgtt 259  Q
    |||||||| ||||| ||||||||||||||||| ||||||||||  ||||   ||||| || |||| ||||| |||||||| |||||| ||||||||||||    
T  42386767 acctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacaga-agccttgtttaggattttgcgaactttgtcgcacgagttgtt 42386669  T
Q  260 gagagttgaaccttggggtagtattgagactt 291  Q
    | |||||||||||||||||||||||| |||||    
T  42386668 gtgagttgaaccttggggtagtattgggactt 42386637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 134
Target Start/End: Complemental strand, 16104268 - 16104163
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||| ||||| |||||| |||||||||||| ||| || ||| ||||||||||||||||||||||||||||||||| || || ||||| |||||||||    
T  16104268 atttcgtaattttgacttttgagttgatccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctg 16104169  T
Q  129 gaaaga 134  Q
    | ||||    
T  16104168 ggaaga 16104163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 188 - 296
Target Start/End: Complemental strand, 16796875 - 16796768
Alignment:
Q  188 ctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgag 287  Q
    ||||||||||||||||||||| ||||||||| | ||||| ||  ||| |||||||||||||||||| ||||| ||||||||||||| |||||| ||| ||    
T  16796875 ctctcgcctcgcgagtgacccggaaacagagtgccttgtgagacttt-gcgacctttgttgcacgaattgttaagagttgaacctttgggtagcattaag 16796777  T
Q  288 acttaatga 296  Q
    |||||||||    
T  16796776 acttaatga 16796768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 12171750 - 12171827
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaaga 106  Q
    ||||||| ||||| |||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  12171750 atttcgtaattttgactttttagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 12171827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 280
Target Start/End: Complemental strand, 324705 - 324471
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattga 146  Q
    ||||||||| | ||| ||| |||||| |||||||| |||| ||||||||||||||||||| ||||| ||||||||||| |||  || | | ||  | |||    
T  324705 ttaagttgaactttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaa-ctgagaatagtttaagaatga 324607  T
Q  147 acttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtt-tttgcgaccttt 244  Q
    | |||||| |  || |||||||| |||||  ||||||||||||||||||||||||||| ||| ||  |||||    |||||||||||   || |||||||    
T  324606 atttttgggagttgcacctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccaagttacagaacaccttgttaggttaaatgtgaccttt 324507  T
Q  245 gttgcacgagttgttgagagttgaaccttggggtag 280  Q
    || | || ||||| || ||||||| |||||||||||    
T  324506 gtcgtacaagttgatgtgagttgatccttggggtag 324471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 282
Target Start/End: Original strand, 52523398 - 52523613
Alignment:
Q  67 ttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaacttttggaatctgacctga 166  Q
    |||||| ||||||||||||| ||||||| ||||||||||| | |||  ||| |||||||||||||   ||  ||||| ||  ||| ||| |   ||||||    
T  52523398 ttttgagtgcctgaacatgtgtaataattattaggaaagattctagtttgatattgaacctggaacagtttaagaatggatttttgggagttacacctga 52523497  T
Q  167 acacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagagt 265  Q
    || |||||  |||||||||||| |||||||  |||||  |||||  ||||| |  |||| ||||| |||||||| |||||| ||||||||  ||||||||    
T  52523498 actcgccatagcgagtagaggccctcgcctgacgagttgcccagttacaga-atgcttgtttaggattttgcgatctttgtcgcacgagtcattgagagt 52523596  T
Q  266 tgaaccttggggtagta 282  Q
    ||||| |||||||||||    
T  52523597 tgaactttggggtagta 52523613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 270
Target Start/End: Original strand, 2050852 - 2051073
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattga 146  Q
    ||||||||| ||||| ||| |||||| ||||| ||||||| ||||||||||||||||||| | |||  ||||||||||||  |||   ||  ||||| ||    
T  2050852 ttaagttgaaccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaacc--gaatagtttaagaatgga 2050949  T
Q  147 acttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-ttaggtttttgcgacctttg 245  Q
      ||| ||| |   |||||||| | |||  |||||||||||||||||||||| ||||  |||||  ||| | |  |||| ||||| |||||||| |||||    
T  2050950 tttttgggagttacacctgaactctccatagcgagtagaggctctcgcctcgtgagttgcccagttaca-aaatgcttgtttaggattttgcgatctttg 2051048  T
Q  246 ttgcacgagttgttgagagttgaac 270  Q
    | ||| |||||||||||||||||||    
T  2051049 tcgcatgagttgttgagagttgaac 2051073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 14234979 - 14234809
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||| | ||||| || |||||||||| ||||| ||  |||||| ||||||||||||| |||| |||||||||||||| | |||  ||||||||||||     
T  14234979 gatttcataattttgacctttaagttgaaccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaacc- 14234881  T
Q  128 ggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgc 199  Q
     |||| | |  |||| |||| |||||| |  || |||||||| ||||| ||||||||||||| ||||||||||    
T  14234880 cgaaatagttaagaa-tgaatttttgggagttgcacctgaactcgccatggcgagtagaggccctcgcctcgc 14234809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 15471413 - 15471310
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| || ||| |||||| ||||| ||| |||||| | ||||||||||| |||| |||||||||||||| || ||  | |||||||||||    
T  15471413 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacct 15471314  T
Q  128 ggaa 131  Q
    ||||    
T  15471313 ggaa 15471310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 23274979 - 23274924
Alignment:
Q  226 ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    |||||||||||||| |||||| ||||||||||||||||||||| ||||||| ||||    
T  23274979 ttaggtttttgcgatctttgtcgcacgagttgttgagagttgagccttgggatagt 23274924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 839723 - 839609
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  ||||||||||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  839723 gcagagagcatgtaagattttgcaatttcgacttttaagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 839624  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  839623 gacaagattgaacct 839609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 15877447 - 15877532
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgatta 99  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| ||| |||||| |||||||| ||| ||| ||| |||||    
T  15877447 cagagagcatgcaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 15877532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 283
Target Start/End: Complemental strand, 12340027 - 12339985
Alignment:
Q  241 ctttgttgcacgagttgttgagagttgaaccttggggtagtat 283  Q
    |||||| |||||||||||||||||||||||||| |||||||||    
T  12340027 ctttgtcgcacgagttgttgagagttgaacctttgggtagtat 12339985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 24188254 - 24188140
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  24188254 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 24188155  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  24188154 gacaagattgaacct 24188140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 55149455 - 55149341
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  55149455 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 55149356  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  55149355 gacaagattgaacct 55149341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 202
Target Start/End: Original strand, 1465059 - 1465215
Alignment:
Q  46 tttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattg 145  Q
    ||||||| || ||||| ||| |||||| ||||||||| ||| | || ||||||| |||||| |||||  |||||||||||||||||  |||  ||||  |    
T  1465059 tttaagtcgaaccttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattgaacctggaataatttaagaac-g 1465157  T
Q  146 aacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    || || ||  |  || ||||||||  |||| |||||||||||||||||||||||||||    
T  1465158 aatttgtgtgagttgcacctgaacttgccatggcgagtagaggctctcgcctcgcgag 1465215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 22109926 - 22110007
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||||| | ||| ||| |||||| ||||||||||||| |||||||||||||| |||  | |||  ||||||||||||||    
T  22109926 ttaagttgaactttagatgtttttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctg 22110007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 14501669 - 14501615
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattagg 101  Q
    ||||||||| ||||| ||| |||||| |||||||| |||| ||||||||||||||    
T  14501669 ttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattagg 14501615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 23275211 - 23275133
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 125  Q
    ||||||||| ||||| ||| |||||| |||||||| |||| |||||||||||||| |||  | |||  |||||||||||    
T  23275211 ttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaac 23275133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 605942 - 606027
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaa 132  Q
    ||||||||| ||||| ||| |||||| ||||||||  ||| |||||||||||||| ||   | |||  ||||||||||||||||||    
T  605942 ttaagttgaaccttagatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctggaaa 606027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 11852055 - 11852006
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcct 78  Q
    ||||||| |||||||||||| |||||| ||||| |||||||||| |||||    
T  11852055 atttcgtaattttaacttttcagttgaaccttagatgcttttgagtgcct 11852006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 281
Target Start/End: Original strand, 24340578 - 24340607
Alignment:
Q  252 gagttgttgagagttgaaccttggggtagt 281  Q
    ||||||||||||||||||||||||||||||    
T  24340578 gagttgttgagagttgaaccttggggtagt 24340607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 37250932 - 37250973
Alignment:
Q  162 cctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    ||||||| |||||  |||||||||||||||||||||||||||    
T  37250932 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 37250973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 4291249 - 4291149
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    ||||||||||||  |||||| ||| |||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  4291249 gcagagagcatgttagattttgtgttttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 4291150  T
Q  113 g 113  Q
    |    
T  4291149 g 4291149  T

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Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 4588628 - 4588680
Alignment:
Q  235 tgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgag 287  Q
    ||||| |||||| ||||||||||||  ||||||||||||||| ||||| ||||    
T  4588628 tgcgagctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgag 4588680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 12171869 - 12171909
Alignment:
Q  161 acctgaacacgccacggcgagtagaggctctcgcctcgcga 201  Q
    ||||||||  |||| ||||||||||||||||||||||||||    
T  12171869 acctgaactggccatggcgagtagaggctctcgcctcgcga 12171909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 15691967 - 15692019
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  15691967 tgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 15692019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 22110116 - 22110156
Alignment:
Q  162 cctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||| |||||  ||||||||||||||||||||||||||    
T  22110116 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 22110156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 23704458 - 23704510
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  23704458 tgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23704510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 23722914 - 23722966
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  23722914 tgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23722966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 23741370 - 23741422
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  23741370 tgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 23741422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 41201487 - 41201539
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  41201487 tgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 41201539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 221; Significance: 1e-121; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 23660525 - 23660237
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  23660525 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 23660426  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||    
T  23660425 atgagattgaacctggaaagattttagaatgaaacttttggaatctgacctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccagaaa 23660326  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  23660325 cagagtgccttgttaggtttttgtgacctttattgcacgagttattgagagttgaaccttggggtagtattgagacttattgatgatgt 23660237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 22337617 - 22337330
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||| | |||||| |||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||||    
T  22337617 agagagcatgcaagatttcgtgattctgacttttgagttgatccttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtagga 22337518  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||||||||||||||| ||||||  ||||||| || | ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  22337517 tgagattgaacctggaaagatt-tagaatgaaactttttgagttctgacctgaattcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 22337419  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  22337418 cagagagtcttgttaggtttttgtgacctttgttgcacgagttgttgagagttgaaccttggagtagtattaagacttaatgatgatgt 22337330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 17 - 302
Target Start/End: Complemental strand, 23076940 - 23076657
Alignment:
Q  17 agagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatg 116  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  23076940 agagcatgcaagatttcgtgattttgactattaagttgatccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatg 23076841  T
Q  117 agattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacag 216  Q
    |||||| ||||||||||||| ||||||  |||||| | | |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  23076840 agattggacctggaaagatt-tagaatgaaactttggaattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagttacccagaaacag 23076742  T
Q  217 agagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    || | ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||    
T  23076741 agtgccttgttagg-ttttgcgacctttgttgcacgagttgttgagagttgaactttggggtagtattgggattttatgatgatgt 23076657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 302
Target Start/End: Original strand, 22737799 - 22738086
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  22737799 agagatcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtagga 22737898  T
Q  115 tgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||||| |||||||||||||||  ||||| | ||| ||||| |||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  22737899 tgagattgaacctagaaagattgtagaatgaaacttgtgggattctgaactgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaa 22737998  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||    
T  22737999 cagagtgccttgttagg-ttttgcgacctttgttgcacgagttgttgagaattgaaccttggggtagtattaagacttaatgaggatgt 22738086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 27754078 - 27753790
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  27754078 cagatagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtagg 27753979  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||||||||||  ||||| | ||| |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||    
T  27753978 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaa 27753879  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||| | |||||||||||| |||||||||||||| |||||||||| |||||| ||| ||| |||||||||||||||||    
T  27753878 acagagtgccttgtta-gattttgcgaccttcgttgcacgagttgtcgagagttgaagcttgggatagcattaagacttaatgatgatgt 27753790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 296
Target Start/End: Original strand, 298433 - 298714
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  298433 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatatagg 298532  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||| ||||||  ||||| | ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  298533 atgagattgaacctggaaagatt-tagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 298631  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    |||||| | ||||||| | |||||||||||||||||||||||||||||||  || |||||| |||||| ||| |||||||||||    
T  298632 acagagtgacttgtta-gattttgcgacctttgttgcacgagttgttgaggattaaacctttgggtagcattaagacttaatga 298714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 15 - 302
Target Start/End: Original strand, 22730852 - 22731140
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22730852 agagagcatgcaatatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 22730951  T
Q  115 tgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||||||||||||||||||||||  ||||| | ||| |||||||||||| |||||||| ||| | ||||||||||||| ||||| |||||||||    
T  22730952 tgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggggagcaaaggctctcgcctcacgagtcacccagaaa 22731051  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaacctt-ggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | ||||||||| |||||||| |||||||||||||| |||||| | ||||||||| ||||||||||| ||||||||||| |||||    
T  22731052 cagagtgccttgttagg-ttttgcgatctttgttgcacgagctgttgataattgaaccttgggggtagtattaagacttaatgaggatgt 22731140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 29 - 291
Target Start/End: Original strand, 32451562 - 32451824
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||    
T  32451562 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatg 32451661  T
Q  129 gaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgtt 227  Q
    |||||||||||||||  ||||| | ||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||    
T  32451662 gaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt 32451761  T
Q  228 aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagactt 291  Q
    | | ||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||||    
T  32451762 a-gattttgcgacctttgttgcacgagttgtcgagagatgaaccttggggtagcattaagactt 32451824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 23286352 - 23286076
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||||||||||||| ||||| |||||| |||||| ||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  23286352 agagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagga 23286253  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaac 214  Q
    ||||||||||| ||||| ||      |||||     |  || | |||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||    
T  23286252 tgagattgaacatggaatgaa-----aattg-----tgagattatgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaac 23286163  T
Q  215 agagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||| | |||||||| |||| ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  23286162 agagtgacttgttagatttt-gcgacctttgttgcatgagttgttgagagttgaacctttgggtagtattaagacttaatgaagatgt 23286076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 293
Target Start/End: Complemental strand, 20309597 - 20309329
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| |||||||||||||||| |||||| | |||||||||||||||||||||||||||||||    
T  20309597 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtagg 20309498  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||           ||||| ||||| | ||| |||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||    
T  20309497 atgagattgaacctg-----------gaattaaacttgtgggattctgacctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaa 20309409  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
    ||| || | ||||||| | |||||||||| ||||||||||| |||| |||||||||||| | |||||| ||| ||||||||    
T  20309408 acaaagtgacttgtta-gattttgcgacccttgttgcacgatttgtcgagagttgaacccttgggtaggattaagacttaa 20309329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 293
Target Start/End: Original strand, 37745 - 38013
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||| ||||||||| |||||||  |||| |||||| ||| || ||||| |||||||||| |||||||||||||||||||||||||||||||  |||||||    
T  37745 cagaaagcatgcaaaatttcgtatttttgacttttgagtggaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtagg 37844  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||           || ||||| || || ||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||    
T  37845 atgagattgaacctggaa-----------ttaaacttgtgagattctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaa 37933  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
    ||| || | ||||||| |  |||||||||||||||||||||||||| |||||||||||||| |||||| ||| ||||||||    
T  37934 acatagtgacttgtta-gactttgcgacctttgttgcacgagttgtcgagagttgaacctttgggtaggattaagacttaa 38013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 14 - 296
Target Start/End: Original strand, 23654028 - 23654286
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||| | ||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23654028 cagagagcatgcaagatttcataattttgacttttgagttgaaccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtagg 23654127  T
Q  114 atgagattgaacctggaaagattgtagaattgaact-tttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||           ||||| |||| || ||| |||||| ||||| ||||||||||||             | ||||||||||||||||    
T  23654128 atgagattgaacctg-----------gaattaaactgttgggattctgacttgaactcgccacggcgag-------------cacgcgagtgacccagaa 23654203  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    |||||| | ||||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||| ||| |||||||||||    
T  23654204 acagagtgacttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaacctttgggtagcattaagacttaatga 23654286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 27 - 201
Target Start/End: Original strand, 22133848 - 22134020
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||  |||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  22133848 agatttcgtacttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 22133947  T
Q  127 tggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcga 201  Q
    | | |||| | ||||| |||| |||||  | |||| |||||| ||||| |||||| |||||||||||||||||||    
T  22133948 taggaagactttagaa-tgaa-ttttgtgaactgaactgaactcgccatggcgagcagaggctctcgcctcgcga 22134020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 50 - 202
Target Start/End: Original strand, 23071617 - 23071768
Alignment:
Q  50 agttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaact 149  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| | ||||||  || |    
T  23071617 agttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaat 23071715  T
Q  150 tttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    || | |||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  23071716 ttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 23071768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 14 - 121
Target Start/End: Original strand, 28291920 - 28292027
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||     
T  28291920 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtaga 28292019  T
Q  114 atgagatt 121  Q
    ||||||||    
T  28292020 atgagatt 28292027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 63 - 199
Target Start/End: Complemental strand, 28406433 - 28406297
Alignment:
Q  63 atgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaacttttggaatctg-a 161  Q
    |||||||||| ||||||||||||||||||||| ||||||||||| || || ||||||||||||||| ||||||| ||||| | || |||||  | ||| |    
T  28406433 atgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaa-taaaattttgtgaactgaa 28406335  T
Q  162 cctgaacacgccacggcgagtagaggctctcgcctcgc 199  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  28406334 cctgaactcgccatggcgagtagaggctctcgcctcgc 28406297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 302
Target Start/End: Complemental strand, 23060815 - 23060727
Alignment:
Q  212 aacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||||| | ||||||||||||| |||||||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||    
T  23060815 aacagagtgccttgttaggtttt-gcgacctttgtt-cacgagttgttgagaattgaactttggggtagtattgggacttaatgatgatgt 23060727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 161 - 278
Target Start/End: Original strand, 23708383 - 23708500
Alignment:
Q  161 acctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgtt 259  Q
    |||||||| |||||  |||||||||||||||||||| |||||| ||||||  ||||| |  |||| ||||| |||||||| |||||| ||||||||||||    
T  23708383 acctgaactcgccatagcgagtagaggctctcgccttgcgagttacccagttacaga-atgcttgtttaggattttgcgatctttgtcgcacgagttgtt 23708481  T
Q  260 gagagttgaaccttggggt 278  Q
    || ||||||||||||||||    
T  23708482 gatagttgaaccttggggt 23708500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 201
Target Start/End: Complemental strand, 25176331 - 25176158
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| || ||| |||||| ||||| ||| |||||| |||||||||||||||||| |||||||||||||  || ||  |||||||||||||    
T  25176331 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacct 25176232  T
Q  128 ggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcga 201  Q
    ||||   ||  ||||  ||  |||  || |  ||||||||| ||||| ||||||||||||| ||||||||||||    
T  25176231 ggaatagtttaagaacagatttttgagagttagacctgaactcgccatggcgagtagaggccctcgcctcgcga 25176158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 276
Target Start/End: Complemental strand, 19672118 - 19672068
Alignment:
Q  226 ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggg 276  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  19672118 ttaggattttgcgatctttgtcgcacgagttgttgagagttgaaccttggg 19672068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 24503587 - 24503473
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  24503587 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 24503488  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  24503487 gacaagattgaacct 24503473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 23100849 - 23100916
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaa 81  Q
    |||||||||||||||||||||| ||||| |||||| |||||| ||| | ||| |||| | ||||||||    
T  23100849 cagagagcatgcaagatttcgtaattttgacttttgagttgaacctcagatgtttttaagtgcctgaa 23100916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 12829492 - 12829434
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||| |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  12829492 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 12829434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 22740719 - 22740768
Alignment:
Q  153 ggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||| | ||||| |||||||||||| ||| ||||||||||||||||    
T  22740719 ggaatctggcttgaactcgccacggcgagcagatgctctcgcctcgcgag 22740768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 27197301 - 27197248
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  27197301 tgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 27197248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 31756264 - 31756232
Alignment:
Q  170 cgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||| |||||||||||||||||||||||||||    
T  31756264 cgccatggcgagtagaggctctcgcctcgcgag 31756232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 218; Significance: 1e-120; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 22627238 - 22626950
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22627238 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22627139  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||| ||||||||||||||| |||| ||||||| ||||||| ||||  ||||||||||| ||||||||||||||||||||||| | ||||    
T  22627138 atgagattgaacctcgaaagattgtagaat-gaacctttggaaatctgacccgaacttgccacggcgagcagaggctctcgcctcgcgagtgatctagaa 22627040  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22627039 acagagtgtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgaggatgt 22626950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 18818028 - 18818315
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  18818028 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagg 18818127  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||||||||||||||||||| |||  |||||||||  |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  18818128 atgagattgaacctggaaagattgtaaaatgaaacttttggtttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 18818227  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||  || |||||||||| ||||||||||| |||||    
T  18818228 cagagtgtcttgttagg-ttttgcgacctttgttgcacgagttgttgagagttgaaatttagggtagtattaagacttaatgaggatgt 18818315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 23406884 - 23406596
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  23406884 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 23406785  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||| ||||||||||||||||||||  ||||| | ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23406784 atgagattggacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 23406685  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||||| ||||| ||||||||||||||||||| ||||||||||||| ||||| || ||||| |||||||||| |||||    
T  23406684 acagagtgccttgttagg-ttttgtgacctttgttgcacgagttattgagagttgaactttgggataatattgggacttaatgaggatgt 23406596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 302
Target Start/End: Original strand, 28648663 - 28648950
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  28648663 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagga 28648762  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttggaatct-gacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||| |||||||||| ||||||  ||| ||| |||| | ||||||||| |||||||||||| |||||||||||||| |||  |||||||||||    
T  28648763 tgagattgaacatggaaagatt-tagaatgaaaccttttgaattttgacctgaactcgccacggcgagcagaggctctcgccttgcgcatgacccagaaa 28648861  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28648862 cagagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 28648950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 20536711 - 20536423
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| |||||  |||||| ||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  20536711 cagagagcatgcaagattttgtgattttgactttcgagttgaaccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtagg 20536612  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||||||||||  ||||| | ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20536611 atgagattgaacctggaaagattgtagaatgaaacttatgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 20536512  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||| ||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| |||||    
T  20536511 acagagtgacttattagg-ttttgcgacctttgttgcacgagttgtcgagtgttgaaccttggggtagtattaagacttaatgaggatgt 20536423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 18878855 - 18879143
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18878855 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 18878954  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||||||||||  ||||| | ||| |||||||||||| ||||| | |||| ||||||||||||||||||||||||||||||    
T  18878955 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccaagacgagcagaggctctcgcctcgcgagtgacccagaa 18879054  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||| | ||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||  |||||||||||||||||    
T  18879055 acagagtgccttgtta-gattttgcggcctttgttgcacgagttgtcgagagttgaaccttgggatagcatcaagacttaatgatgatgt 18879143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 6759759 - 6759471
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| |    
T  6759759 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaa 6759660  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||| |||||| ||| ||||||  ||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  6759659 tgagattgaacttggaaatattttagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 6759560  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| ||||||||||| |||||| | || ||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  6759559 cagagtgtcttgttaggattttgcaatctgtgtcgcacaagttgctaagagttgaaccttggggtagtattgagacttaatgatgatgt 6759471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 21923546 - 21923834
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||  |||||| |||||||| |||||| |||||||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||    
T  21923546 cagagagcatgtgagattttgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtagg 21923645  T
Q  114 atgagattgaacctggaaagattgtagaattgaac-ttttggaatctga-cctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccaga 211  Q
    ||||||||||||||| ||||||| ||||||  ||| ||||||| ||||| ||||||| |||||||| ||| |||||||||||||||||||||||||||||    
T  21923646 atgagattgaacctgaaaagatt-tagaatgaaactttttggattctgaccctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccaga 21923744  T
Q  212 aacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||||| | ||||||||| |||||||||||||||||| ||||| |||||||||||||||||| ||||||||| |||||||||||||||||    
T  21923745 aacagagtgccttgttagg-ttttgcgacctttgttgcccgagtagttgagagttgaaccttgaggtagtattaagacttaatgatgatgt 21923834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 23649055 - 23648768
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||||||||||| || |||| |||||| |||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  23649055 agagagcatgcaagatttcatgtttttgacttttgagttgatccttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtagga 23648956  T
Q  115 tgagattgaacctggaaagattgtagaattgaac-ttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||| ||||| ||||| | ||||||  ||| ||||||||| |||||| |||| ||||| |||||  |||||||||||||||| |||| ||||||||    
T  23648955 tgagattggacctgaaaagact-tagaatgaaacattttggaattctgacc-gaactcgccatggcgatcagaggctctcgcctcgtgagtaacccagaa 23648858  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  23648857 acagagtgacttgttaggtttatgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattaagacctaatgatgatgt 23648768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 16091959 - 16092247
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||||||||     
T  16091959 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtaga 16092058  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||| |||||| ||||||| || ||   ||||||||||| |||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  16092059 atgagattaaacctgaaaagatt-taaaaaaaaacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcccgagtgacccagaa 16092157  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | | ||||||| |||||||| || |||  ||| ||||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  16092158 acagagtgccctgttaggattttgcgatctgtgtcacacaagttgttaagagttgaaccttggggtaatattgagacttaaggatgatgt 16092247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 22875568 - 22875280
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| || ||| |||| ||||||| ||||||||||  | || ||||||| ||||||||||||||||||| |||||     
T  22875568 cagagagcttgcaagatttcgtgattttgacctttgagttaatccttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtaga 22875469  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    | ||| ||||||||||||||||| ||||||  |||||| |||||||||||||||| ||||| | |||| |||||||||||||||||||||||||||||||    
T  22875468 acgaggttgaacctggaaagattttagaatgaaactttgggaatctgacctgaactcgccatgacgagcagaggctctcgcctcgcgagtgacccagaaa 22875369  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | |||||||||  ||||||| || ||| |||| ||||||| ||||||||||||||||||||||||||||  ||||| ||||||    
T  22875368 cagagtgacttgttagggctttgcgatctatgtcgcacaagttgttaagagttgaaccttggggtagtattgagatgtaatggtgatgt 22875280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 14 - 281
Target Start/End: Complemental strand, 41598687 - 41598420
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| |||| |||| ||||||||| |||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||     
T  41598687 cagagagcttgcaggattccgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaga 41598588  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||||||||||||||| ||||||  |||||| |||||||||||||||| ||||| |||||| ||||||||||||||||||||||||| ||  |    
T  41598587 atgagattgaacctggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagtta 41598488  T
Q  214 cagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    |||| |  |||| ||||| |||||||| |||||  |||||||| |||||||||||||||||||||||||    
T  41598487 caga-atgcttgtttaggattttgcgatctttgccgcacgagtcgttgagagttgaaccttggggtagt 41598420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 302
Target Start/End: Complemental strand, 7373237 - 7372985
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||| ||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7373237 atttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctg 7373138  T
Q  129 gaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgtt 227  Q
    |||||||||||||||  ||||| || || |||||||||||| ||||||||||                     |||||||||||||||||| ||||||||    
T  7373137 gaaagattgtagaatgaaacttgtgaaattctgacctgaactcgccacggcg---------------------agtgacccagaaacagagtgtcttgtt 7373059  T
Q  228 aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| |||||    
T  7373058 agg-ttttgcgacctttgttgcacgagttgttgagagttgaactttggggtggtagtgagacttaatgaggatgt 7372985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 14 - 293
Target Start/End: Complemental strand, 31971747 - 31971479
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||| |||| |||||| |||||| ||||| |||||||||  |||||||||||||||||||||||||||||||| |||||||    
T  31971747 cagagagcatgcaagatttcgtgtttttgacttttgagttgaaccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtagg 31971648  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||           ||||| ||||| || || |||||||||||| |||| ||||||| ||||||| || ||||||||| |||||||||    
T  31971647 atgagattgaacctg-----------gaattaaacttgtgagattctgacctgaactcgccccggcgagcagaggctgtcacctcgcgagcgacccagaa 31971559  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
    | |||| | ||||||| | ||||||||||||||||||||||||||| ||||| |||||||| |||||| ||| ||||||||    
T  31971558 atagagtgacttgtta-gattttgcgacctttgttgcacgagttgtcgagagctgaacctttgggtaggattaagacttaa 31971479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 293
Target Start/End: Original strand, 16199276 - 16199543
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||  |||||||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  16199276 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttggatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtagg 16199375  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||||||           |||||| |||| | ||| |||||||||||| |||||| ||||| ||| ||||||||||||||||||||||| |||    
T  16199376 atgagattgaacct-----------agaattaaactgtgggattctgacctgaactcgccacagcgagcagacgctctcgcctcgcgagtgacccaaaaa 16199464  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
    ||||| | ||| || || ||||||||||||||||||||||||||| |||||||||||| | |||||| ||| ||||||||    
T  16199465 cagagtgacttatt-ggattttgcgacctttgttgcacgagttgtcgagagttgaacccttgggtaggattaagacttaa 16199543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 299
Target Start/End: Original strand, 21918628 - 21918903
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||| ||||||||||||||||| ||||| |||||| |||||| ||||| ||||||| || ||||||||||||||||||||||||||| ||||||||||||    
T  21918628 cagacagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtagg 21918727  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    | |||||||||||||||||   || | | |||     | ||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||| |||||    
T  21918728 aagagattgaacctggaaa---tg-aaacttg-----tgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaa 21918818  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatga 299  Q
    ||||| | ||||||| | ||||||||||||||||||| ||||||| |||||||||||| | |||||  ||| |||||||| |||||    
T  21918819 cagagtgacttgtta-gattttgcgacctttgttgcatgagttgtcgagagttgaacccttgggtaagattaagacttaacgatga 21918903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 38 - 296
Target Start/End: Original strand, 25362793 - 25363040
Alignment:
Q  38 ttttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 137  Q
    |||| |||||| |||||| ||||| |||| ||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||       
T  25362793 ttttgacttttgagttgaaccttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctggaatga--- 25362889  T
Q  138 tagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttg 236  Q
            ||||| ||| || ||||||||||| ||||| |||||| |||||||||||||||| ||||||||| ||||||||| | ||||| ||  ||| |    
T  25362890 --------aacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgagagtgacccggaaacagagtgccttgtgagacttt-g 25362980  T
Q  237 cgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  25362981 cgacctttcttgcacgagttgttgagagttgaacctttgggtagtattaagacttaatga 25363040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 5865895 - 5866082
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  5865895 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 5865994  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||| ||||| | ||||||  || ||| | |||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  5865995 atgagattgaacctgaaaagact-tagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 5866082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 21491495 - 21491308
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  21491495 cagagagcatgcaagattttgtaattttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 21491396  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||||||||| |||||| | ||||||  || ||| | ||||||||||  |||  |||| |||||||||||||||| ||||||||||    
T  21491395 atgagattgaacctagaaagact-tagaatgaaaatttagagaatctgacc-aaacttgccatggcgagtagaggctcttgcctcgcgag 21491308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 17141416 - 17141229
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| ||  |||| |||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  17141416 cagagagcatgcaagattttgtattttttacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 17141317  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||| ||||| | ||||||  || ||| | ||||| |||| |||| ||||| |||||| ||||||||||||||||||||    
T  17141316 atgagattgaacctgaaaagact-tagaatgaaaatttagagaatcagacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 17141229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 21249884 - 21249697
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||   |||| |||||| |||||| ||||| |||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  21249884 cagagagcatgcaagatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtagg 21249785  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||| |||||||||||||| | | ||||  || ||| | |||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  21249784 atgagactgaacctggaaagact-tggaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 21249697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 21255722 - 21255535
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||   |||| |||||| |||||| ||||| |||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  21255722 cagagagcatgcaagatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtagg 21255623  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||||| | | ||||  || ||| | |||||||||| |||| ||||| |||||| || |||||||||||||||||    
T  21255622 atgagattgaacctggaaagact-tggaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagcggctctcgcctcgcgag 21255535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 45130649 - 45130766
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||| |||||||||||||||  |||| |||||| | |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45130649 cagagaccatgcaagatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 45130748  T
Q  114 atgagattgaacctggaa 131  Q
    ||||||||||||||||||    
T  45130749 atgagattgaacctggaa 45130766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 26355329 - 26355504
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||| || ||  ||||||||||||    
T  26355329 agatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaacc 26355428  T
Q  127 tggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||| | ||||| |||| ||||| ||||   ||||||||  |||| |||||||||||||||||||||| ||||    
T  26355429 tggaaagactttagaa-tgaatttttgtgaattgtacctgaacttgccatggcgagtagaggctctcgcctcacgag 26355504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 27 - 201
Target Start/End: Complemental strand, 21674195 - 21674021
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||  | | |||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  21674195 agatttcgtaattttgacttttgagttgatccttggacgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 21674096  T
Q  127 tggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcga 201  Q
    |||||||||| ||||| ||||  |||| || |   |||||||| ||||| ||||||||||||| ||||||||||||    
T  21674095 tggaaagattttagaa-tgaatatttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcga 21674021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 14 - 281
Target Start/End: Original strand, 19801045 - 19801312
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||| | ||| ||||||||||||||||||||||||||||||||| |  ||     
T  19801045 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcatatgagtgcctgaacatgtctaataatgattaggaaagactagaga 19801144  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    || |||||||||||||||   ||  ||||  |||||| ||| |  |  |||||||| ||||| ||||||||||||  ||||||||||||||      |      
T  19801145 ataagattgaacctggaatagtttaagaac-gaacttgtgggagttatacctgaactcgccatggcgagtagaggtcctcgcctcgcgagtacttgtgtt 19801243  T
Q  213 acagagagtcttgtt-aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    ||||| || |||||| ||| |||| ||| |||||| ||||||||  ||||||||||||||||||||||||    
T  19801244 acaga-agccttgtttaggatttttcgatctttgtcgcacgagtcattgagagttgaaccttggggtagt 19801312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 299
Target Start/End: Original strand, 45130793 - 45130901
Alignment:
Q  190 ctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagac 289  Q
    ||||||||||||||||||||||||||||| | ||| |||| |||| ||||||||||||||||||||||| |||||||| ||| | |||||| ||| ||||    
T  45130793 ctcgcctcgcgagtgacccagaaacagagtgacttattagatttt-gcgacctttgttgcacgagttgtcgagagttggacccttgggtaggattaagac 45130891  T
Q  290 ttaatgatga 299  Q
    ||||| ||||    
T  45130892 ttaataatga 45130901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 38854883 - 38854986
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| || |||||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||| || ||  | ||||| |||||    
T  38854883 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaacct 38854982  T
Q  128 ggaa 131  Q
    ||||    
T  38854983 ggaa 38854986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 202
Target Start/End: Complemental strand, 39834303 - 39834147
Alignment:
Q  46 tttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattg 145  Q
    ||||||| || ||||| ||| |||||| ||||| ||| ||| | ||||||||||||||||| |||||  |||||||||||||||||   ||  |||||      
T  39834303 tttaagtcgaaccttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacctggaatagtttaagaatga 39834204  T
Q  146 aacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    | ||||  || |   |||||||| ||||| |||||||||||||||||||||||||||    
T  39834203 atctttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 39834147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 6520857 - 6520779
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaaga 106  Q
    |||||||| ||||| || |||||||||| ||||| ||| |||||| || |||||||||||||||||| |||||||||||    
T  6520857 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgtctgaacatgtctaataataattaggaaaga 6520779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 21389071 - 21389156
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgatta 99  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| |||||||| |||  |||||| |||||    
T  21389071 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaagatgcttaataaagatta 21389156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 131
Target Start/End: Original strand, 23760481 - 23760575
Alignment:
Q  37 attttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 131  Q
    ||||| |||||| ||||||||| |  ||| |||||| | ||||||||||||||||||||||||||||| | || |   |||||||||||||||||    
T  23760481 attttgacttttgagttgatccctgaatgtttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctggaa 23760575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 13507914 - 13507957
Alignment:
Q  226 ttaggtttttgcgacctttgttgcacgagttgttgagagttgaa 269  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  13507914 ttaggtttttgcgatctttgtcgcacgagttgttgagagttgaa 13507957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 269
Target Start/End: Original strand, 13597446 - 13597489
Alignment:
Q  226 ttaggtttttgcgacctttgttgcacgagttgttgagagttgaa 269  Q
    |||||||||||||| |||||| ||||||||||||||||||||||    
T  13597446 ttaggtttttgcgatctttgtcgcacgagttgttgagagttgaa 13597489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 21414857 - 21414956
Alignment:
Q  26 aagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 125  Q
    |||||||||  ||||| |||||| ||| || ||||| ||| |||||| |||||||| |||   | |||||||||||||||| ||||| ||||||||||||    
T  21414857 aagatttcggaatttttactttttagtggaaccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 21414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 20527926 - 20527812
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  20527926 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 20527827  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  20527826 gacaagattgaacct 20527812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 18865753 - 18865695
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||| |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  18865753 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 18865695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 20499127 - 20499049
Alignment:
Q  50 agttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    |||||| | ||| ||| |||||| ||||||||||||| |||||||||||||| |||  | |||  ||||||||||||||    
T  20499127 agttgaactttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattgagattgaacctg 20499049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 13507660 - 13507713
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattag 100  Q
    ||||||||| ||||| ||| |||||| |||||||| |||| |||||||||||||    
T  13507660 ttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattag 13507713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 13597192 - 13597245
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattag 100  Q
    ||||||||| ||||| ||| |||||| |||||||| |||| |||||||||||||    
T  13597192 ttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattag 13597245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 281
Target Start/End: Original strand, 17611968 - 17611997
Alignment:
Q  252 gagttgttgagagttgaaccttggggtagt 281  Q
    ||||||||||||||||||||||||||||||    
T  17611968 gagttgttgagagttgaaccttggggtagt 17611997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 16409889 - 16409989
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||| ||||| |||||| |||||| ||||| |||||||||| ||||| || |||| || ||| ||||||   |  || ||| |||||||||||||||    
T  16409889 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttattaaagattagatgatgatttagaatgagattgaacctg 16409988  T
Q  129 g 129  Q
    |    
T  16409989 g 16409989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 37116704 - 37116664
Alignment:
Q  162 cctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||| |||||  ||||||||||||||||||||||||||    
T  37116704 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 37116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 38855015 - 38855055
Alignment:
Q  161 acctgaacacgccacggcgagtagaggctctcgcctcgcga 201  Q
    |||||||| ||||| ||||||||||||| ||||||||||||    
T  38855015 acctgaactcgccatggcgagtagaggccctcgcctcgcga 38855055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 40414 - 40127
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||| || ||||||||||||| |||||||||    
T  40414 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtagg 40315  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||| | |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  40314 atgagattgaacctg-acagattgtagaat-gaacttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 40217  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||||   |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40216 acagagtaccttgttaggtgtttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 40127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 39262 - 38975
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  39262 cagagagcatgcaagatttcgtaattttgactttgaagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 39163  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||||||||||||||| | ||||  ||||| |||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  39162 atgagattgaacctggaaagatttt-gaatgaaacttgtggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 39064  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    || || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39063 catagtgacttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattaagacttaatgatgatgt 38975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 38227982 - 38227695
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  38227982 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 38227883  T
Q  115 tgagattgaacctggaaagattgtagaattgaactttt-ggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||||||||||||||| ||||||  ||||||| ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||    
T  38227882 tgagattgaacctggaaagatt-tagaatgaaactttttggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaa 38227784  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  38227783 cagagtgccttgttaggtttttgcgacctttgttgcacgagttgttaagagttgaaccttggggtagtattaagacttaatgatgatgt 38227695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 3563982 - 3564270
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||| ||||| |||||| ||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3563982 cagagagcttgcaagatttcgttattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 3564081  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||| ||||| | | ||||||||||||||||||||||||||    
T  3564082 atgagattgaacctggaaagattgtagaat-gaacttttggaaatctgacctgaactcgccacagcgagcaaatgctctcgcctcgcgagtgacccagaa 3564180  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  3564181 acagagtgccttgttaggattttgcgacctttgttgcacgagttgttaagagtttaaccttggggtagtattgagacttaatgatgatgt 3564270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 9509692 - 9509404
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9509692 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 9509593  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||||||||||  ||||| | ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  9509592 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgaggagaggctctcgcctcgcgagtgacccagaa 9509493  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||| | ||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||| ||||||||||| |||||    
T  9509492 acagagtgccttgtta-gattttgcgacctttgttgcaagagttgtcgagagttgaaccttgggatagcattaagacttaatgaggatgt 9509404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 12699335 - 12699047
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12699335 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 12699236  T
Q  114 atgagattgaacctggaaagattgtagaattgaact-tttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||| |||||||||||||||||||| ||||  ||||  | ||| |||||||||||| |||||||||||| |||||||||| ||||| |||||||||||||    
T  12699235 atgaaattgaacctggaaagattgttgaatgaaactcgtgggattctgacctgaactcgccacggcgagcagaggctctcacctcgtgagtgacccagaa 12699136  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||| || | ||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||| ||| ||||||| |||||    
T  12699135 acaaagtgacttgttagg-ttttgcgacctttgttgcacgagttgtcgatagttgaaccttggggtagtattaagagttaatgaggatgt 12699047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 15143654 - 15143943
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaactttta-agttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||| | ||| ||||||||||||||| ||||||  |||||  ||||| |||| ||||| ||||||||||||||||||||||||||||||||| | |||    
T  15143654 cagagaacttgcgagatttcgtgattttgactttttgagttgtaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttag 15143753  T
Q  113 gatgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccaga 211  Q
     ||||||||||||||||||||||| |||||| ||||||||| || ||||||||| || ||||| |||||| ||||||||||||||||||||||||| |||    
T  15143754 aatgagattgaacctggaaagattttagaat-gaacttttgtgattctgacctgtactcgccatggcgagcagaggctctcgcctcgcgagtgacctaga 15143852  T
Q  212 aacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||| | |||||||||||| ||||||||| | |||||||||||||||||    
T  15143853 aacagagtgccttgttaggattttgcgacctttgttgcacgagttgctaagagttgaacctcggggtagtactaagacttaatgatgatgt 15143943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 14 - 296
Target Start/End: Original strand, 16385876 - 16386147
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16385876 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 16385975  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||           ||||| ||||| | ||| ||| |||||||| |||||||||||| || |||||||||||||||||||||||||||    
T  16385976 atgagattgaacctg-----------gaattaaacttgtgggattctaacctgaactcgccacggcgagcagtggctctcgcctcgcgagtgacccagaa 16386064  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    |||||| | ||||||| | ||||||||||||||||||| |||||||  ||||||||||||| |||||  ||| |||||||||||    
T  16386065 acagagtgacttgtta-gattttgcgacctttgttgcatgagttgtccagagttgaacctttgggtaacattaagacttaatga 16386147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 29 - 281
Target Start/End: Original strand, 17061593 - 17061845
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  17061593 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17061692  T
Q  129 gaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-tt 227  Q
    || ||||| ||||||  ||||||  ||||||||||||||| ||| | |||||||||||||||||||||||||||||||| |   ||||| |  |||| ||    
T  17061693 gatagattttagaataaaactttgagaatctgacctgaactcgcgatggcgagtagaggctctcgcctcgcgagtgacctatttacaga-atgcttgttt 17061791  T
Q  228 aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    ||| |||||||| |||||| |||||||| ||||||||||||||| |||||||||    
T  17061792 aggattttgcgatctttgtcgcacgagtcgttgagagttgaaccatggggtagt 17061845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 14 - 299
Target Start/End: Original strand, 27847462 - 27847736
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| |||||||||||||||||| |||||||||||||||| ||||    
T  27847462 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttagg 27847561  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||           ||||| ||||| | ||| | |||||||||| ||||||||| || ||||||||||||||||||||||||||| ||    
T  27847562 atgagattgaacctg-----------gaattaaacttatgggattttgacctgaactcgccacggcaagcagaggctctcgcctcgcgagtgacccaaaa 27847650  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatga 299  Q
    |||||| | ||||||| | ||||||||||||||||||||||||||| |||||||||||| | |||||| ||| ||||||||| ||||    
T  27847651 acagagtgacttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaacccttgggtaggattaagacttaataatga 27847736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 14 - 293
Target Start/End: Complemental strand, 40443880 - 40443613
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||| |||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  40443880 cagaaagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 40443781  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||            | ||||| | ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  40443780 atgagattgaacctggaa------------ttaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 40443693  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
    |||||| | ||| || || ||||||||||||||||||||||||||| ||||| |||||| | |||||| ||| ||||||||    
T  40443692 acagagtgacttatt-ggattttgcgacctttgttgcacgagttgtcgagagatgaacccttgggtaggattaagacttaa 40443613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 29 - 281
Target Start/End: Complemental strand, 44116992 - 44116741
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||| ||||| ||| || ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  44116992 atttcgtaattttgactcttgagttgatccttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccg 44116893  T
Q  129 gaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-tt 227  Q
    |||||||| ||||||  |||||| |||||||||||||||| ||||| |||||| |||||||||||||||||||||||| |||  ||||| |  || | ||    
T  44116892 gaaagatt-tagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgactcagttacaga-acgctagttt 44116795  T
Q  228 aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    ||| |||||||| |||| |||||||||| |||||| ||||||||||||||||||    
T  44116794 aggattttgcgatctttattgcacgagtcgttgagggttgaaccttggggtagt 44116741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 296
Target Start/End: Complemental strand, 26212488 - 26212217
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| |||||| |||||| ||||| |||| ||||| ||||||||||||||||||| | |||||| |||||||||||    
T  26212488 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtagg 26212389  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccag-a 211  Q
    |||||||||||||||||| ||           ||||| || |  |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  26212388 atgagattgaacctggaatga-----------aacttgtgaggttctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 26212300  T
Q  212 aacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    ||||||| |  |||||||  |||||||||||||||||||||||||||||||  || |||||| |||||| ||| |||||||||||    
T  26212299 aacagagtgatttgttag--ttttgcgacctttgttgcacgagttgttgaggattaaacctttgggtagcattaagacttaatga 26212217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 29 - 281
Target Start/End: Original strand, 12756350 - 12756601
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||| ||||| |||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  12756350 atttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 12756449  T
Q  129 gaaagattgtagaattgaac-ttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-t 226  Q
    | |  |||  |||| ||||| |||||||| ||||||||||| | ||| ||||||||||||||||||||||||||||  ||||   ||| | || |||| |    
T  12756450 g-attatttaagaa-tgaactttttggaagctgacctgaactcaccatggcgagtagaggctctcgcctcgcgagttgcccaattaca-aaagccttgtt 12756546  T
Q  227 taggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    |||| |||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  12756547 taggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttggggtagt 12756601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 39267264 - 39267447
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| |||||| |||||| |||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  39267264 cagagagcatgcaagattttgtgattttgacttttgagttgaaccttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 39267363  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcg 198  Q
    ||||||||||||||||||||| | ||||||  |||||| | |||||||| |||||| ||||| |||||| ||||||||||||||||    
T  39267364 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcg 39267447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 2831924 - 2832110
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  2831924 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 2832023  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||||||||| |||||| | ||||| |||||||| | |||||||| |||||| | ||| |||||| ||||||||||||||||||||    
T  2832024 atgagattgaacctagaaagact-tagaa-tgaactttggagaatctga-ctgaactcaccatggcgagcagaggctctcgcctcgcgag 2832110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 9751168 - 9751355
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  9751168 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 9751267  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||| ||||||||||||||| | ||||||  |||||| | |||| ||| |||||| ||||| || ||| ||||||||||||||||||||    
T  9751268 atgaggttgaacctggaaagact-tagaatgaaactttggagaatttga-ctgaactcgccatggtgagcagaggctctcgcctcgcgag 9751355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 18302681 - 18302494
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| |||||| |||||| ||||| ||||  |||| ||||||||||||||||||| | ||||||||||||||||||    
T  18302681 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtagg 18302582  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||||| | ||||||  |||||| |  ||||||| |||||| ||||| |||||| ||||||||||||||||||||    
T  18302581 atgagattgaacctggaaagact-tagaatgaaactttggataatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 18302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 28504919 - 28505106
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| |||||| |||||| ||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||     
T  28504919 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 28505018  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||| ||||| | ||||||  || ||| | |||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  28505019 atgagattgaacctgaaaagact-tagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 28505106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 810760 - 810936
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||| ||||||||||| ||||||||||||||||||||| || || || ||||||||||    
T  810760 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaacc 810859  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    |||||||| | ||||| |||| |||||  | ||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  810860 tggaaagaatttagaa-tgaatttttgtgaactgtacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 44014664 - 44014489
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| ||||||| |||| ||| |||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  44014664 agatttcgtaattttgacttttgagttgatacttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 44014565  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||||| ||||| |||| |||||  |  || |||||||| ||||| || ||||||||||||||||||||||||    
T  44014564 tggaaagattttagaa-tgaatttttgttagttgcacctgaactcgccatggtgagtagaggctctcgcctcgcgag 44014489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 15754505 - 15754689
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||   |||| |||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||     
T  15754505 cagagagcatgcaagatttcgaatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtaga 15754604  T
Q  114 atgagattgaacctggaaagattgtagaat-tgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcg 198  Q
    ||||||||||||||||||| | | ||||||   |||||||| |||||||||| ||||  ||||||||||| | ||||||||||||||    
T  15754605 atgagattgaacctggaaaaact-tagaatgaaaacttttgagaatctgacc-gaacttgccacggcgagcataggctctcgcctcg 15754689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 170 - 299
Target Start/End: Complemental strand, 10589384 - 10589256
Alignment:
Q  170 cgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaa 269  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| | ||||||||||||| |||||||||||||  ||||||| |    
T  10589384 cgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtta-gattttgcgaccttttttgcacgagttgtctagagttgga 10589286  T
Q  270 ccttggggtagtattgagacttaatgatga 299  Q
    |||| |||||| ||| ||||||||||||||    
T  10589285 cctttgggtaggattaagacttaatgatga 10589256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 34201286 - 34201099
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| || ||||||||||||||||||||| | |||||||| |||     
T  34201286 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttaga 34201187  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||| ||||| | ||||||  || ||| | |||||||| |||||| ||||| |||||| ||||||||| ||||||||||    
T  34201186 atgagattgaacctgtaaagact-tagaatgaaaatttggagaatctga-ctgaactcgccatggcgagcagaggctcttgcctcgcgag 34201099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 11995676 - 11995768
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaaga 106  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  11995676 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 282
Target Start/End: Original strand, 12255462 - 12255677
Alignment:
Q  67 ttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaacttttggaatctg-acctg 165  Q
    |||||| ||| ||||||||| ||||||||||||||||||| | |||  |||||||||||||||||   ||  ||||| ||| |||||| |  |  |||||    
T  12255462 ttttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaat-gaatttttgggagttacacctg 12255560  T
Q  166 aacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagag 264  Q
    ||| |||||  |||||||||||||||||||||||||||  |||||  ||||| |  |||| ||||| |||||||| ||||||  ||||||||||||||||    
T  12255561 aactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacaga-atgcttgtttaggattttgcgatctttgtcacacgagttgttgagag 12255659  T
Q  265 ttgaaccttggggtagta 282  Q
    |||||  |||||||||||    
T  12255660 ttgaattttggggtagta 12255677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 68236 - 68132
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| ||| ||| || |||||||| |||||||||||||||||||||||| || ||  ||||||||||||    
T  68236 agatttcgtaattttgacttttgagttgatccttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaacc 68137  T
Q  127 tggaa 131  Q
    |||||    
T  68136 tggaa 68132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 76 - 268
Target Start/End: Complemental strand, 16056769 - 16056576
Alignment:
Q  76 cctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccac 175  Q
    ||||||||||| ||||||||| ||||||||| | |||  |||||||||||||||||   ||  ||||| ||  ||| |||||   |||||||| |||||     
T  16056769 cctgaacatgtataataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggatttttgggaattacacctgaactcgccat 16056670  T
Q  176 ggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtt-tttgcgacctttgttgcacgagttgttgagagttga 268  Q
     ||||||||||||||||||||||||||| ||||||  |||||  | |||||||||||   ||||| |||||| |||||||||| || |||||||    
T  16056669 agcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgttaggttaaatgcgatctttgtagcacgagttgatgtgagttga 16056576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 16324495 - 16324392
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| || |||||||||| ||||  ||| |||||| ||| ||||||||||||||||||||||||||||| || ||  |||||||||||||    
T  16324495 gatttcgtaattttgacctttaagttgaaccttgaatgtttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacct 16324396  T
Q  128 ggaa 131  Q
    ||||    
T  16324395 ggaa 16324392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 18006131 - 18006052
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaaga 106  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||| ||||||    
T  18006131 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaaga 18006052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 47832297 - 47832194
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| || |||||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||| || ||  | |||||||| ||    
T  47832297 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaatct 47832198  T
Q  128 ggaa 131  Q
    ||||    
T  47832197 ggaa 47832194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 47 - 278
Target Start/End: Original strand, 2279769 - 2280000
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattga 146  Q
    ||||||||||  ||| ||| |||||| ||||||||||||  ||||||||||||||||||| | |||  |||||||||||||| ||   ||  ||||| ||    
T  2279769 ttaagttgatatttagatgattttgagtgcctgaacatgcataataatgattaggaaagattttagattgagattgaacctgtaatagtttaagaatgga 2279868  T
Q  147 acttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-ttaggtttttgcgacctttg 245  Q
      ||| ||  |   |||||||| |||||  |||||||||||| ||||||||||||||  || ||  | ||| |  |||| ||||| |||||||| |||||    
T  2279869 tttttgggtgttacacctgaactcgccatagcgagtagaggccctcgcctcgcgagttgcctagttataga-atgcttgtttaggattttgcgatctttg 2279967  T
Q  246 ttgcacgagttgttgagagttgaaccttggggt 278  Q
    |  ||||||||||||||||||||||||||||||    
T  2279968 tcacacgagttgttgagagttgaaccttggggt 2280000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 22073366 - 22073223
Alignment:
Q  67 ttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaacttttggaatctgacctga 166  Q
    |||||| ||||||||||||| ||||||||||||| ||||| | ||| |||||||||||||| |||   ||  ||||| ||  ||| ||| |   ||||||    
T  22073366 ttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacctagaatagtttaagaatggatttttgggagttacacctga 22073267  T
Q  167 acacgccacggcgagtagaggctctcgcctcgcgagtgacccag 210  Q
    || ||||| ||||||||||||| |||||||||||||| ||||||    
T  22073266 actcgccatggcgagtagaggccctcgcctcgcgagttacccag 22073223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 203
Target Start/End: Original strand, 16219348 - 16219523
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||| | ||||| || |||||||||| ||||| ||| |||||| || || ||| ||| ||||||||||||||||||| | |||  |||||||||||||    
T  16219348 gatttcataattttgacctttaagttgaaccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacct 16219447  T
Q  128 ggaaagattgtagaattgaactttt-ggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    ||||   ||  |||| |||| |||| ||| |   || ||||| ||||| ||||||||||||| ||||||||||||||    
T  16219448 ggaatagtttaagaa-tgaatttttgggagttacacgtgaactcgccatggcgagtagaggccctcgcctcgcgagt 16219523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 44407988 - 44408102
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||| ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  44407988 gcagagagcatgtaagattttgaaatttcgactttttagttgaaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 44408087  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  44408088 gacaagattgaacct 44408102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 9389337 - 9389430
Alignment:
Q  38 ttttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 131  Q
    |||| ||||||||||||| ||||  ||| |||||| || ||| || ||| |||| |||||||||||||| |||||  |||||||||||||||||    
T  9389337 ttttgacttttaagttgaaccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaacctggaa 9389430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 81
Target Start/End: Original strand, 19649103 - 19649170
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaa 81  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| ||| |||||| ||||||||    
T  19649103 cagagagcatgcaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaa 19649170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 11262749 - 11262691
Alignment:
Q  69 ttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    ||||||||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  11262749 ttgaatgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 11262691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 14953674 - 14953560
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  14953674 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14953575  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  14953574 gacaagattgaacct 14953560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 26420454 - 26420340
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  26420454 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 26420355  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  26420354 gacaagattgaacct 26420340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 21064780 - 21064897
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| |||||||||| |||||||| |  | | |||| | ||||| ||| || |||  ||||||||||||  |||||||||||||||| | | |||     
T  21064780 cagagagcttgcaagattttgtgattttgagctgtgagtttaaccttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttaga 21064879  T
Q  114 atgagattgaacctggaa 131  Q
    |||||||||||| |||||    
T  21064880 atgagattgaacttggaa 21064897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 202
Target Start/End: Original strand, 9389462 - 9389501
Alignment:
Q  163 ctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  9389462 ctgaactcgccatggcgagtagaggctctcgcctcgcgag 9389501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 14959585 - 14959526
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    ||||| |||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  14959585 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14959526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 68099 - 68061
Alignment:
Q  164 tgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  68099 tgaactcgccatggcgagtagaggctctcgcctcgcgag 68061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 2529628 - 2529682
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattagg 101  Q
    ||||||||| ||||| ||| |||||| |||||||| |||| ||||||||||||||    
T  2529628 ttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattagg 2529682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 281
Target Start/End: Original strand, 10063678 - 10063707
Alignment:
Q  252 gagttgttgagagttgaaccttggggtagt 281  Q
    ||||||||||||||||||||||||||||||    
T  10063678 gagttgttgagagttgaaccttggggtagt 10063707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 11547957 - 11548010
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  11547957 tgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11548010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 11554553 - 11554606
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  11554553 tgcctgaacatacctagtaatgattaggaatgaatgtaggaaaagattgaacct 11554606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 14148985 - 14148932
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  14148985 tgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 14148932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 24054969 - 24054884
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgatta 99  Q
    ||||| ||||||||||||| ||  |||| |||||| |||||| ||||| ||| |||||| |||||||| |||| || ||| |||||    
T  24054969 cagagtgcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 24054884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 9751390 - 9751442
Alignment:
Q  235 tgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgag 287  Q
    ||||| |||||| ||||||||||||  ||||||||||||||| ||||| ||||    
T  9751390 tgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgag 9751442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 20702681 - 20702733
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  20702681 tgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 20702733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 32768090 - 32768038
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  32768090 tgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 32768038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 206; Significance: 1e-112; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 52415 - 52128
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||  ||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  52415 cagagagcatgcaagattttttgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 52316  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||||||||||  ||||| | ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  52315 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 52216  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    || ||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52215 actgagtgtcttgttagg-ttttgcgacc-ttgttgcacgagttgttgagagttgaaccttggggtagtattaagacttaatgatgatgt 52128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 14 - 296
Target Start/End: Original strand, 167608 - 167879
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  167608 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 167707  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||||||    |||||| | | |||     | ||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  167708 atgagattgaacct----agattgaa-acttg-----tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 167797  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    ||||| | ||||||| | |||||||||||||||||||||| |||| |||||||||||||| |||||| ||| |||||||||||    
T  167798 cagagtgacttgtta-gattttgcgacctttgttgcacgaattgtcgagagttgaacctttgggtagcattaagacttaatga 167879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 205; Significance: 1e-112; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 26 - 302
Target Start/End: Complemental strand, 833 - 557
Alignment:
Q  26 aagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 125  Q
    |||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  833 aagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaac 734  T
Q  126 ctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg 225  Q
    || |||||| | ||||||  |||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  733 ctagaaagaatttagaatgaaacttttggaatctgaactgaactcgccgcggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg 634  T
Q  226 ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  633 ttaggtttttgcaacctttgttgcatgagttgttgagagttgaaccttggggtagtattgagacttaatgaggatgt 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 3973 - 3685
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||| ||| |||||||||| || |||||||||||||||||||||||||||||||||||||    
T  3973 cagagagcatgcaagatttcgtgattttgacttttgagttgatctttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtagg 3874  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||| |||||||||||  ||||| | ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||    
T  3873 atgagattgaacctggaatgattgtagaatcaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccaaaa 3774  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| |  |||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||    
T  3773 acagagtgagttgttagg-ttttgcgacctttgttgcacgagttgttgagaattgaactttggggtagtattaagacttaatgaggatgt 3685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 8978 - 8690
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||||| |||||||||| |||||||| |||||||||| ||||||||||||||||||||    
T  8978 cagagagcatgcaagattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtagg 8879  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||| ||||||||||| ||| |||||| | ||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||    
T  8878 atgagattgaacctagaaagattgtaaaatggaacttgtgggattctgacctgaactcgccacggccagtagaggctctcgcctcgcgaatgacccagaa 8779  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  8778 acagagtgtcttgttagg-ttttgcgacctttgttgcacgagttgttgagagttgaaccttggagtagtattaagacttaatgatgatgt 8690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 201; Significance: 1e-109; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 13594 - 13307
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  13594 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtagga 13495  T
Q  115 tgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||| ||| ||||||||||||||  ||||| | ||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  13494 tgagattgaatctgaaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 13395  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    | ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  13394 ctgagtgtcttgttagg-ttttgcgacctttgttgcacgagttgttgagagttgaactttggggtagtattgggacttaatgaagatgt 13307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 14 - 201
Target Start/End: Complemental strand, 34623 - 34437
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  34623 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 34524  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcga 201  Q
    ||||||||||||||| ||||| | ||||||  || ||| | |||||||||| |||| ||||| |||||| |||||||||||||||||||    
T  34523 atgagattgaacctgaaaagact-tagaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcga 34437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 201; Significance: 1e-109; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 15 - 302
Target Start/End: Original strand, 25684 - 25971
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||| ||||||||||| || |||| |||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  25684 agagagcttgcaagatttcatgtttttgacttttgagttgatccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 25783  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||||||| |||||||||||||| ||| |||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  25784 tgagattgaacctgaaaagattgtagaat-gaatttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 25882  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | ||||||||| |||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||    
T  25883 cagagtgccttgttaggattttgcgacctttgttgcacgagttgctaagagctgaaccttggggtagtattgagacttaatgatgatgt 25971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 33112 - 33401
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||| |||||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  33112 cagagagcttgcaagatttcgtgattttcacttttgagttgatccttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtagg 33211  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||| ||||||  ||||||||||| ||| |||||||| |||||||||||| | |||||||||||||||| |||||||||||    
T  33212 atgagattgaacctggaaagattttagaatgaaacttttggaagtcttacctgaactcgccacggcgagcaaaggctctcgcctcgcgtgtgacccagaa 33311  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||| ||| |||||||| || |||   || ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33312 acagagtgccttgtcaggattttgcgatctgtgtcatacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 33401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 17 - 302
Target Start/End: Original strand, 8154 - 8439
Alignment:
Q  17 agagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatg 116  Q
    ||||||||||||||||||||||||| |||||| |||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8154 agagcatgcaagatttcgtgattttgacttttgagttgatccttg-atgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 8252  T
Q  117 agattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaaca 215  Q
    |||||||||||||||||||||||||||  ||||||||||| |||| ||| ||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  8253 agattgaacctggaaagattgtagaatgaaacttttggaattctggcctaaactcgccacggtgagtagaggctctcgcctcgcgagtgacccagaaaca 8352  T
Q  216 gagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaacctt-ggggtagtattgagacttaatgatgatgt 302  Q
    ||| ||||||||||| |||||||||||| |||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||    
T  8353 gagtgtcttgttagg-ttttgcgaccttcgttgcacgagttgttgagagttgaacgttgggggtagtattgggacttaatgaggatgt 8439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 29 - 302
Target Start/End: Complemental strand, 23370 - 23097
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||| ||||| |||||| |||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||    
T  23370 atttcgtaattttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggatctg 23271  T
Q  129 gaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgtt 227  Q
    ||||||||||||||||||| ||||||||| |||| |||| | |||||| ||||| |||||| |||||||||||||||||| |||||||||| ||||||||    
T  23270 gaaagattgtagaattgaa-ttttggaattctgaactgagctcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgtcttgtt 23172  T
Q  228 aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23171 aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 23097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 299
Target Start/End: Original strand, 339569 - 339853
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||  |||||||||||||||||||| |||||||||    
T  339569 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtagg 339668  T
Q  114 atgagattgaacctggaaagattgtagaattgaactttt-ggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  339669 atgagattgaacctggaaagattgtagaa-tgaacttttgggaatctgacatgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 339767  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatga 299  Q
    | |||| | ||||||||| |||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  339768 atagagtgccttgttagg-ttttgcgacctttgttgcacgagtcgttaagggttgaaccttggggtagtattgagacttaatgatga 339853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 71789 - 71742
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatcctta 61  Q
    |||||||||||||||||||||||||||| |||||| |||||| |||||    
T  71789 cagagagcatgcaagatttcgtgattttgacttttgagttgaacctta 71742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 194; Significance: 1e-105; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 16833 - 17121
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||| || |||| |||||  |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  16833 cagagagcatgcaagatttcttgtttttgactttcgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 16932  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||| ||||||  |||||||||||| ||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||    
T  16933 atgagattgaacctggaaagatt-tagaatgaaacttttggaattctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaa 17031  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||||   ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  17032 acagagtaccttattaggattttgcgacctttgttgcacgagttgttgagagttaaaccttggggtagtattgagacttaatcatgatgt 17121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 78980 - 79096
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||| | |||||| |||||| ||||| |||||||||| ||| ||||||||| |||||||||||||||| ||||||||     
T  78980 cagagagcatgcaagattttgtaattctgacttttgagttgaaccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtaga 79079  T
Q  114 atgagattgaacctgga 130  Q
    |||||||||||||||||    
T  79080 atgagattgaacctgga 79096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 176 - 281
Target Start/End: Original strand, 79109 - 79214
Alignment:
Q  176 ggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttg 274  Q
    ||||||||||||||||||||||||||||  ||||   ||||| || |||| ||||| |||||||| |||||| ||||||||  |||||||||||||||||    
T  79109 ggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgtttaggattttgcgatctttgtcgcacgagtcattgagagttgaaccttg 79207  T
Q  275 gggtagt 281  Q
    |||||||    
T  79208 gggtagt 79214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 194; Significance: 1e-105; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 32 - 300
Target Start/End: Complemental strand, 29061025 - 29060757
Alignment:
Q  32 tcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 131  Q
    |||||||||  |||||| |||||||||||| |||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  29061025 tcgtgatttcgacttttgagttgatccttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaa 29060926  T
Q  132 agattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttagg 230  Q
    |||||||||||| |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  29060925 agattgtagaat-gaacttttggaaatctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg 29060827  T
Q  231 tttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgat 300  Q
     |||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||    
T  29060826 attttgcgacctttgttgcacgagttgctaagagctgaaccttggggtagtattgagacttaatgatgat 29060757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 18409445 - 18409733
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||| |||||||||||||| || ||| |||||||||||| |||||||||| ||||| |||||||||| ||||||||||||||||||||||     
T  18409445 cagagagcatgcaggatttcgtgattttgacctttgagttgatccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtaga 18409544  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||| ||||||  ||||||| |||| ||||||||||| |||||||||||| ||||||||||||||| | ||||||||||||    
T  18409545 atgagattgaacctggaaagatt-tagaatgaaactttttgaattctgacctgaactcgccacggcgagcagaggctctcgcctctctagtgacccagaa 18409643  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||||| |||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  18409644 acagagtgccttgttaggattttacgacctttgttgcacgagttattgagagttgaaccttagggtagtattgagacttaatgatgatgt 18409733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 17287414 - 17287702
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17287414 cagagagcatgcaagatttcgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 17287513  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||| ||||| ||||||||||||||||||||  ||||| | ||| |||||||| ||| ||||||||||| |||||||||| | |||| |||||||||||||    
T  17287514 atgtgattgtacctggaaagattgtagaatgaaacttgtgggattctgacctaaactcgccacggcgattagaggctcttgtctcgtgagtgacccagaa 17287613  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| |||||||||||  ||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  17287614 acagagtgtcttgttagg-gtttgctatctttgttgcacgagttgttgagagttgaaccttggggtagcattgagacttaatgaggatgt 17287702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 22779845 - 22780133
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22779845 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 22779944  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||||||||||  ||||| | ||| |||||||| ||| ||||||||| || | ||||||||||||||||||| ||| ||||    
T  22779945 atgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctaaactcgccacggcaagcaaaggctctcgcctcgcgagtaacctagaa 22780044  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| ||| ||||||| ||||| |||||||||||||| |||||  ||||||||||||||||||||||||  |||||||||||||||||    
T  22780045 acagagtgtcctgttagg-ttttgtgacctttgttgcacaagttgccgagagttgaaccttggggtagtataaagacttaatgatgatgt 22780133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 19303159 - 19303447
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  19303159 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 19303258  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttgg-aatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||| ||||||| ||||||  ||||||||| |||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||    
T  19303259 atgagattgaacctgaaaagatt-tagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgagagtgacccagaa 19303357  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||||| |||||||| || ||| |||| ||||| | |||||||||||||||||||| | ||||| |||||||||||||    
T  19303358 acagagtgccttgttaggattttgcgatctatgtcgcacaagttgctaagagttgaaccttggggtagcactgagaattaatgatgatgt 19303447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 14 - 297
Target Start/End: Complemental strand, 20594276 - 20593993
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||| ||| |||||| ||||| |||||||||||  ||||||||| |||||||||||    
T  20594276 cagagagcttgcaagatttcgtgatttttacttttgagttgatccttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtagg 20594177  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||||||||||  ||||||||||| |||||||||||| ||| |||||||| ||||||||||||||||||||||||| ||||    
T  20594176 atgagattgaacctggaaagattgtagaata-aacttttggaaatctgacctgaactcgctacggcgagcagaggctctcgcctcgcgagtgacctagaa 20594078  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgat 297  Q
    |||||| | ||||||||| |||||||| || ||| |||| ||||||| || ||||||||||||||||||||||||||||||||||    
T  20594077 acagagtgccttgttaggattttgcgatctgtgtcgcacaagttgttaagggttgaaccttggggtagtattgagacttaatgat 20593993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 26 - 299
Target Start/End: Original strand, 20360601 - 20360863
Alignment:
Q  26 aagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 125  Q
    ||||||||||| |||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20360601 aagatttcgtgtttttgacttttcagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 20360700  T
Q  126 ctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtctt 224  Q
    |||||| ||           ||||| ||| || ||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||||||||| | |||    
T  20360701 ctggaatga-----------aacttgtgggattctgacctgaactcgccatggcgagctgaggctctcgcctcgcgagtgacccagaaacagagtgactt 20360789  T
Q  225 gttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatga 299  Q
    |||||| |||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||    
T  20360790 gttagg-ttttgcgacctttgttgcacgagttgttgaggattgaacctttgggtagtattaagacttaatgatga 20360863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 17 - 302
Target Start/End: Original strand, 20637915 - 20638189
Alignment:
Q  17 agagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatg 116  Q
    ||||||| ||||||||||| ||||| |||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20637915 agagcatccaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 20638014  T
Q  117 agattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaaca 215  Q
    ||||||||||||||| ||           ||||| ||| || ||||||||||| |||||||||||| | |||||||| ||||||||||||||||||||||    
T  20638015 agattgaacctggaatga-----------aacttgtgggattctgacctgaactcgccacggcgagcaaaggctctcacctcgcgagtgacccagaaaca 20638103  T
Q  216 gagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||| | |||||||| |||| ||||||||||||||||||||||| ||||||||||||||||| ||  ||| |||||||||||||||||    
T  20638104 gagtgccttgttagatttt-gcgacctttgttgcacgagttgtcgagagttgaaccttgggataacattaagacttaatgatgatgt 20638189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 24 - 298
Target Start/End: Original strand, 25628983 - 25629257
Alignment:
Q  24 gcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattga 123  Q
    |||||||||| ||||||| |||||| |||||| ||||| ||| | || |  |||| ||||| |||| |||||||||||||| | ||||| ||||||||||    
T  25628983 gcaagatttcatgattttgactttttagttgaaccttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattga 25629082  T
Q  124 acctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtc 222  Q
    ||||||||| ||| ||||||  |||||||| || | ||||||| || ||||  |||||| |||||||||||||||||||||||||||||||||||| | |    
T  25629083 acctggaaatattttagaata-aacttttgtgattatgacctgtactcgccgtggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgcc 25629181  T
Q  223 ttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatg 298  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25629182 ttgttaggattttgcgacttttgttgcacgagttgttaagagttgaaccttggggtagtattgagacttaatgatg 25629257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 29808501 - 29808691
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||     
T  29808501 cagagagcatgtaagatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtaga 29808600  T
Q  114 atgagattgaacctggaaaga-ttgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    ||||||||||||||||||||| || ||||||  |||||| |||||||||||||||| ||||| |||||| |||||||||||||||||||||    
T  29808601 atgagattgaacctggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 29808691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 29 - 291
Target Start/End: Original strand, 18821463 - 18821714
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||||||||| |||||| |||||| ||||| |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  18821463 atttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 18821562  T
Q  129 gaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgtt 227  Q
    ||| ||           ||||| ||| || ||||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||||||| | ||||||    
T  18821563 gaatga-----------aacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgtt 18821651  T
Q  228 aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagactt 291  Q
    | | ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  18821652 a-gattttgcgacctttgttgcacgagttgtcgagagttgaaccttggggtagcattaagactt 18821714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 203
Target Start/End: Original strand, 28496091 - 28496280
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||     
T  28496091 cagagagcatgtaagatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtaga 28496190  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    ||||||||||||||||||||| | ||||||  |||||||| ||||||||||||||| ||||| |||||| |||||||||||||||||||||    
T  28496191 atgagattgaacctggaaagact-tagaatgaaacttttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 29 - 277
Target Start/End: Complemental strand, 18457202 - 18456955
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  18457202 atttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 18457103  T
Q  129 gaaagattgtagaattgaac-ttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgtt 227  Q
    ||   |||  |||| ||||| |||||||| |||||||||||  |||| ||||||||||||||||||||||||||||  ||||   ||||| || ||||||    
T  18457102 gattaatt-aagaa-tgaactttttggaagctgacctgaactagccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgtt 18457006  T
Q  228 -aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttgggg 277  Q
     ||| |||||||| |||||| |||||||| |||||||||||||||||||||    
T  18457005 caggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgggg 18456955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 15 - 293
Target Start/End: Original strand, 16920263 - 16920530
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    |||||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  16920263 agagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtagga 16920362  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    | |||||| |||||           ||||| ||||| ||||| |||||||||||| ||||| |||||| |||||||||||||| ||||||||||||||||    
T  16920363 taagattgtacctg-----------gaattaaacttatggaattctgacctgaactcgccatggcgagcagaggctctcgccttgcgagtgacccagaaa 16920451  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
    || || | |||||| || |||||||||||||||||||||| || | |||||||||||| | |||||| ||| ||||||||    
T  16920452 caaagtgacttgtt-ggattttgcgacctttgttgcacgatttctcgagagttgaacccttgggtagaattaagacttaa 16920530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 21939886 - 21939699
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||| ||||  |||| ||||||||||||| ||||| ||||||||||||||||||||    
T  21939886 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtagg 21939787  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||||| |||||||||| | ||||||  |||||| | |||||||| |||||| ||||| |||||| ||||||||||||||||||||    
T  21939786 atgagattgagcctggaaagact-tagaataaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 21939699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 14 - 291
Target Start/End: Complemental strand, 22831994 - 22831728
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| ||  ||||||||||||||| |||||||  |||||| ||||    
T  22831994 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtttgaacatgtctaatattgattagtgaagaatatagg 22831895  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    | ||||||||||||||||  |      || |||    | ||| ||| |||||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  22831894 acgagattgaacctggaatta------aactga----tgggattctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccgagaaa 22831805  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagactt 291  Q
    ||||| | |||||| || ||||||||||||||| |||||| | || |||||||||||| | |||||| ||| ||||||    
T  22831804 cagagtgacttgtt-ggattttgcgacctttgtcgcacgattcgtcgagagttgaacccttgggtagaattaagactt 22831728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 27 - 200
Target Start/End: Complemental strand, 19652685 - 19652512
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  19652685 agatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaacc 19652586  T
Q  127 tggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcg 200  Q
    |||||||| | ||||| |||| ||||| ||||   |||||||| ||||| |||||||||||||||||||||||||    
T  19652585 tggaaagactttagaa-tgaatttttgtgaattgtacctgaactcgccatggcgagtagaggctctcgcctcgcg 19652512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 198
Target Start/End: Complemental strand, 1561806 - 1561622
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||     
T  1561806 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtaga 1561707  T
Q  114 atgagattgaacctggaaagattgtagaat-tgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcg 198  Q
    ||||||||||||||||||| | | ||||||   |||||||| |||||||||| ||||  ||||||||||| | ||||||||||||||    
T  1561706 atgagattgaacctggaaaaact-tagaatgaaaacttttgagaatctgacc-gaacttgccacggcgagcataggctctcgcctcg 1561622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 4667831 - 4668019
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||| |||||| || ||| ||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||     
T  4667831 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4667930  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
     |||||||| ||||||||||| | ||||| |||| |||||  | ||| |||||||| ||||| |||||||||||||||||||||||||||    
T  4667931 gtgagattggacctggaaagagtttagaa-tgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4668019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 4185441 - 4185629
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||| |||||| || ||| ||||| |||||||||| ||| |||||| ||||||||| ||||| ||||||||||||     
T  4185441 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtaga 4185540  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
     |||||||||||||||||||| | ||||| |||| |||||  | ||| |||||||| ||||| |||||||||||||||||||||||||||    
T  4185541 gtgagattgaacctggaaagagtttagaa-tgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 4185629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 25611347 - 25611530
Alignment:
Q  20 gcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgaga 119  Q
    |||||||||||||||||||||| |||||| |||||| ||||| |||| ||||| |||||||||||||||||||||||||||||  ||||| || ||||||    
T  25611347 gcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgaga 25611446  T
Q  120 ttgaacctggaaagattgtagaattgaac--ttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||| ||||||||||| | ||||||  |||   || ||| |||||||||||| ||||| || ||| ||||||||||||||||||||    
T  25611447 ttggacctggaaagact-tagaatgaaacaacttaggattctgacctgaactcgccatggagagcagaggctctcgcctcgcgag 25611530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 4189459 - 4189271
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||| |||||| || ||| ||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||     
T  4189459 cagagagcatgcaagattctgtgttttttacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4189360  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
     |||||||| ||||||||||| | ||||| |||| |||||  | ||| |||| ||| || || |||||||||||||||||||||||||||    
T  4189359 gtgagattggacctggaaagagtttagaa-tgaatttttgtgaactgaacctaaactcgtcatggcgagtagaggctctcgcctcgcgag 4189271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 4674678 - 4674866
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||| |||||| || ||| ||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||     
T  4674678 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 4674777  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
     |||||||| ||||||||||| | ||||| |||| |||||  | ||| |||| ||| || || |||||||||||||||||||||||||||    
T  4674778 gtgagattggacctggaaagagtttagaa-tgaatttttgtgaactgaaccttaactcgtcatggcgagtagaggctctcgcctcgcgag 4674866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 25603003 - 25603188
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| | | || ||||| |||||||||||||||||||||||||||||  ||||| | |    
T  25603003 cagagagcatgcaagatttcgtgattttaacttttgagttgaacctgaaacgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcatg 25603102  T
Q  114 atgagattgaacctggaaagattgtagaattgaac--ttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcg 198  Q
    ||||||||| ||||||||||| | ||||||  |||   || ||| |||||| ||||| | ||| |||||| ||||||||||||||||    
T  25603103 atgagattggacctggaaagact-tagaatgaaacaacttaggattctgacttgaactcaccatggcgagcagaggctctcgcctcg 25603188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 15894049 - 15894237
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    |||||||||||||||||||||  |||| |||||| |||||| ||||| |||| ||||| ||||||||||||||||||| |||||||||  ||||||| ||    
T  15894049 agagagcatgcaagatttcgtacttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaaga 15894148  T
Q  115 tgagattgaacctggaaagattgtagaat---tgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||| ||||||||||| | ||||||    |||| || ||| |||||||||||| ||||| |||||| |||| ||||| |||||||||    
T  15894149 tgagattggacctggaaagact-tagaatgaaagaac-ttgggattctgacctgaactcgccatggcgagcagagtctctcacctcgcgag 15894237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 28 - 201
Target Start/End: Original strand, 27332916 - 27333089
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||| | ||||| || |||||||||| ||||| |||||||||| || |||||||||| |||| |||||||||||||| | ||| ||||| ||||||||    
T  27332916 gatttcataattttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacct 27333015  T
Q  128 ggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcga 201  Q
    ||||||||| ||||| |||| ||||| || |   |||||||| ||||| ||||||||||||||||||||||||||    
T  27333016 ggaaagattttagaa-tgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27333089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 28 - 201
Target Start/End: Original strand, 27393656 - 27393829
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||| | ||||| || |||||||||| ||||| |||||||||| || |||||||||| |||| |||||||||||||| | ||| ||||| ||||||||    
T  27393656 gatttcataattttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacct 27393755  T
Q  128 ggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcga 201  Q
    ||||||||| ||||| |||| ||||| || |   |||||||| ||||| ||||||||||||||||||||||||||    
T  27393756 ggaaagattttagaa-tgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcga 27393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 11185994 - 11185769
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||| ||||||||||   ||| | |||| |||||| ||||| |||| ||||| |||||||||||||| |||| |||||||  |||| ||||||    
T  11185994 cagagagcatgtaagatttcgtatatttgatttttgagttgaaccttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtagg 11185895  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    | ||||||||||||||||           || ||||| ||| || || |||||||| |||||||||||| |||||| ||||||||| |||||||||||||    
T  11185894 acgagattgaacctggaa-----------ttaaacttatgggattctaacctgaactcgccacggcgagcagaggccctcgcctcgtgagtgacccagaa 11185806  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgca 250  Q
    ||| || | ||||||| | |||||||||||||||||||    
T  11185805 acatagtgacttgtta-gattttgcgacctttgttgca 11185769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 22334500 - 22334618
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| | ||| |||||| |||||| ||||| |||| ||||| ||||||||||||||||||| |||||||||  ||||||| |    
T  22334500 cagagagcatgcaagatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaag 22334599  T
Q  114 atgagattgaacctggaaa 132  Q
    ||||||||| |||||||||    
T  22334600 atgagattggacctggaaa 22334618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 14 - 135
Target Start/End: Original strand, 31155016 - 31155137
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||  |||| |||||| || ||| ||||| |||||||||| |||||||| | ||||||||| |||| |||||||||||||     
T  31155016 cagagagcatgcaagattctgtttttttgacttttgagatgacccttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtaga 31155115  T
Q  114 atgagattgaacctggaaagat 135  Q
    ||||||||||||||||||||||    
T  31155116 atgagattgaacctggaaagat 31155137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 281
Target Start/End: Complemental strand, 25644811 - 25644558
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| || |||||||||| ||||| ||| |||||| ||||||  ||||| |||   ||||||||||||| | |||  |||||||||||||    
T  25644811 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgttcatgtataacgttgattaggaaagattttagattgagattgaacct 25644712  T
Q  128 ggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgtt 227  Q
    | ||   ||  ||||| ||  ||| ||| |   ||| |||| |||||  |||||||||||| ||||||||||||||  ||| |   ||||  | ||||||    
T  25644711 gaaatagtttaagaatggatttttgggagttacacccgaactcgccatagcgagtagaggccctcgcctcgcgagttgcccggtttcagaatg-cttgtt 25644613  T
Q  228 -aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
     |||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  25644612 taggtttttgcgatctttgtcgcacgagttgctgagagttgaaccttggggtagt 25644558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 203
Target Start/End: Complemental strand, 23019877 - 23019721
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattga 146  Q
    ||||||||| ||||| |||||||||| ||||||||||||| | ||||||||||||||||| | |||  ||||||||||||||| || ||| ||  | |||    
T  23019877 ttaagttgaaccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacctgg-aatattttaagaatga 23019779  T
Q  147 actttt-ggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    | |||| ||| |   |||||||| ||||| ||||||||||||| || |||||||||||    
T  23019778 atttttgggagttacacctgaactcgccatggcgagtagaggcccttgcctcgcgagt 23019721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 31164473 - 31164589
Alignment:
Q  11 gagcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgt 110  Q
    |||||||||||||||||||||| |  ||||| || ||| ||||||| |||  |||   |||| |||||||||||  ||| ||||||||||||| ||||||    
T  31164473 gagcagagagcatgcaagattttgcaattttgacatttgagttgatacttggatgtccttgagtgcctgaacatacctagtaatgattaggaatgaatgt 31164572  T
Q  111 aggatgagattgaacct 127  Q
    |||||||||||| ||||    
T  31164573 aggatgagattggacct 31164589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 22080368 - 22080543
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| | |||||  ||| |||||| ||||| ||| |||||| || |||||||||||||||||||||||| ||||| |  ||  | ||||||||||    
T  22080368 agatttcgtaactttaaacttttagttgaaccttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacc 22080467  T
Q  127 tggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||   ||  ||||  |||||| | ||| |   |||||||| ||||| |||||||||||||||||||||||||||    
T  22080468 tggaatagtttaagaa-cgaacttatgggagttatacctgaactcgccatggcgagtagaggctctcgcctcgcgag 22080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 199
Target Start/End: Original strand, 25956253 - 25956424
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| |||||||||||||  |||| ||  |||||| |||||||||||||||||| | |||| | ||||| | |||  ||||||| |||||    
T  25956253 gatttcgtaattttgacttttaagttgaatcttagatatttttgagtgcctgaacatgtctaattacgattggaaaagattctagattgagatttaacct 25956352  T
Q  128 ggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgc 199  Q
    ||||   ||  ||||| ||  ||||||| |   ||||| |  ||||| ||||||||||||||||||||||||    
T  25956353 ggaatagtttaagaatggattttttggagttacacctgtattcgccatggcgagtagaggctctcgcctcgc 25956424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 86
Target Start/End: Complemental strand, 22439302 - 22439230
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgt 86  Q
    ||||||||||||||||||| || ||||| |||||| |||||| ||||| ||| |||||| |||||||| ||||    
T  22439302 cagagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgt 22439230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 27415572 - 27415619
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatcctta 61  Q
    |||||||||||||||||||||||||||| |||||| |||||| |||||    
T  27415572 cagagagcatgcaagatttcgtgattttgacttttgagttgaacctta 27415619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 22331917 - 22331803
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  22331917 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 22331818  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  22331817 gacaagattgaacct 22331803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 19863480 - 19863395
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgatta 99  Q
    ||||||||||| ||||||||||  |||| |||||| |||||| ||||| ||| |||||| |||||||| ||| ||| ||| |||||    
T  19863480 cagagagcatgtaagatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgcctattaaagatta 19863395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 1538628 - 1538686
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||| |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  1538628 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 1544727 - 1544785
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||| |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  1544727 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 1544785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 16372280 - 16372223
Alignment:
Q  69 ttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||| ||||||||||| |||| ||||||||||| | ||||||||||  ||||||||||    
T  16372280 ttgagtgcctgaacatatctagtaatgattagggatgaatgtaggacaagattgaacc 16372223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 22432752 - 22432667
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgatta 99  Q
    ||||||||||||||||||| ||  |||| |||||| |||||| ||||| ||| |||||| ||| |||| |||| || ||| |||||    
T  22432752 cagagagcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcatgaagatgtatattaaagatta 22432667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 25641942 - 25641991
Alignment:
Q  153 ggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||| | ||||| |||||||||||| ||| ||||||||||||||||    
T  25641942 ggaatctggcttgaactcgccacggcgagcagatgctctcgcctcgcgag 25641991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 113
Target Start/End: Complemental strand, 14099104 - 14099004
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    ||||||||||||  |||||| ||| |||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  14099104 gcagagagcatgttagattttgtgttttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14099005  T
Q  113 g 113  Q
    |    
T  14099004 g 14099004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 202
Target Start/End: Complemental strand, 19668728 - 19668688
Alignment:
Q  162 cctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||| |||||  ||||||||||||||||||||||||||    
T  19668728 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 19668688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 20109685 - 20109605
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    ||||||||| | ||| ||| || ||| ||||||||||||| |||||||||||||| |||  | |||  |||||||||||||    
T  20109685 ttaagttgaactttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacct 20109605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 31316781 - 31316821
Alignment:
Q  73 atgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||| ||| ||||||||||||| |||||||||    
T  31316781 atgcctgaacatgcctagtaatgattaggaatgaatgtagg 31316821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 20906 - 20618
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20906 cagagagcatgtaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 20807  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||| ||||||  ||||| | ||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| ||||    
T  20806 atgagattgaacctggaaagattatagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacctagaa 20707  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||  ||| ||| |||||||||||||||||    
T  20706 acagagtgccttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaaccttggaatagcattaagacttaatgatgatgt 20618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 184; Significance: 1e-99; HSPs: 5)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 125085 - 124800
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  125085 cagagagcatgcaagatttggtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 124986  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||   ||||||||||||||||||||||  ||||| | ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  124985 atgag---gaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 124889  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    | |||| ||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||| |||||    
T  124888 aaagagtgtcttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaaccttgggatagcattaagacttaatgaggatgt 124800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 143
Target Start/End: Complemental strand, 63051 - 62935
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| | ||| |||||| |||||||||||| ||| |||||| ||| ||||||||||||||||||||||||||||| || || |||||||||||||    
T  63051 agatttcgtaaatttgacttttgagttgatccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 62952  T
Q  127 tggaaagattgtagaat 143  Q
    |||||| ||| ||||||    
T  62951 tggaaatattttagaat 62935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 175267 - 175202
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctg 79  Q
    |||||||||||||||||||||| ||||| |||||| |||||| ||||| ||| |||||| ||||||    
T  175267 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctg 175202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 136132 - 136173
Alignment:
Q  162 cctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    ||||||| |||||  |||||||||||||||||||||||||||    
T  136132 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 136173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 203
Target Start/End: Original strand, 144840 - 144881
Alignment:
Q  162 cctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    ||||||| |||||  |||||||||||||||||||||||||||    
T  144840 cctgaactcgccatagcgagtagaggctctcgcctcgcgagt 144881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 183; Significance: 5e-99; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 15 - 300
Target Start/End: Complemental strand, 14039151 - 14038865
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||| ||||||||||| ||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| |    
T  14039151 agagagcttgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaa 14039052  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||||| |||||||| ||||||  ||||||||||| ||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  14039051 tgagattgaacctagaaagattttagaatgaaacttttggaaatctgaccagaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 14038952  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgat 300  Q
    ||||| | ||||||||| |||||||| || ||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  14038951 cagagtgccttgttaggattttgcgatctgtgtcgcacaagttgctaagagttgaaccttggggtagtattgagacttaatgatgat 14038865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 16377140 - 16377429
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||| ||| ||||||||||| ||||||| |||||| |||||||||||| ||||||||||  | |||||||||||||||||||||||||||| ||||||||    
T  16377140 cagatagcttgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtagg 16377239  T
Q  114 atgagattgaacctggaaagattgtagaattgaactttt-ggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||| ||| |||||| ||||||||| |||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  16377240 atgagattgaacctggaatgatcgtagaa-tgaacttttgggaatctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaa 16377338  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgt-tgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||| || | ||||||||| |||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  16377339 acatagtgccttgttaggattttgctacctttgttgcacgagttttatgagagttgaaccttggggtagtattgagacttaatgatgatgt 16377429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 22636937 - 22636649
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| |||| | |||||||||||| |||||||||| || ||||| |||||||||||||||||||||||||||||||    
T  22636937 cagagagcatgcaagattttgtgattttgacttctgagttgatccttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtagg 22636838  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||| ||||||||||  ||||| | ||| |||||| ||| | |||||||||||| ||||||||||||||| ||||||||||||||    
T  22636837 atgagattgaacctggaaaaattgtagaatgaaacttgtgggattctgacttgacctcgccacggcgagcagaggctctcgcctcacgagtgacccagaa 22636738  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| || |||||    
T  22636737 acagagtgtcttgttagg-ttttgcgacctttgttgcacgagttgttgagaattgaaccttggggtagtattaagacttaacgaggatgt 22636649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 44053332 - 44053044
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||| || |||||||||||||||||||||| ||||||||||||||    
T  44053332 cagagagcatgcaagatttcatgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtagg 44053233  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||| ||||||| ||| ||  ||||| | ||| |||||||||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  44053232 atgagattgaacctgtaaagattataggatgaaacttgtgggattctgacctgaactcgccacggcgagcagagactctcgcctcgcgagtgacccagaa 44053133  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||    
T  44053132 acagagtgccttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaaccttgggatagcattaagacttaatgatgatgt 44053044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 15091400 - 15091111
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| |||||||| ||| |||||||||| |  |||||||||||||||| |||||||||||||||||||     
T  15091400 cagagagcttgcaagatttcgtgattttgacttttgagttgatctttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtaga 15091301  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||| |||| ||||||  ||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  15091300 atgagattgaacctggaaggattttagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 15091201  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||||| |||||||| || ||| |||| ||||  | |||||||||||||||||||||||||||||||||||| |||||    
T  15091200 acagagtgccttgttaggattttgcgatctgtgtcgcacaagtttctaagagttgaaccttggggtagtattgagacttaatgaagatgt 15091111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 14 - 261
Target Start/End: Complemental strand, 7799200 - 7798953
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||| | |||||||||||| |||||||||| |||||||||||| |||||||||||||||| | ||||||||    
T  7799200 cagagagcatgcaagatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtagg 7799101  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||||| |||||||||  ||||| | | | |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  7799100 atgagattgaacctggaaagtttgtagaatgaaacttgtagtattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaa 7799001  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttga 261  Q
    ||| || ||||||||||| |||||||||||||||| |||||||||||||    
T  7799000 acaaagtgtcttgttagg-ttttgcgacctttgtttcacgagttgttga 7798953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 15 - 281
Target Start/End: Original strand, 44928542 - 44928808
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||| ||||||||| ||||||||| |||||| |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||| |    
T  44928542 agagagcttgcaagattccgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaa 44928641  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaac 214  Q
    |||||||||||||||||||||| ||||||  |||||| ||||||||||| |||| ||||| |||||| ||||||||||||||||||||||||||||  ||    
T  44928642 tgagattgaacctggaaagattttagaatgaaactttgggaatctgaccagaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttac 44928741  T
Q  215 agagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    ||| |  |||| ||||| |||||||| |||||| |||||||| |||||||||||||||||| ||||||    
T  44928742 aga-atgcttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaaccttgtggtagt 44928808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 14 - 296
Target Start/End: Complemental strand, 12903248 - 12902978
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| |||||| |||||| ||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  12903248 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtagg 12903150  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||| ||           ||||| ||| || ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  12903149 atgagattgaacctggaatga-----------aacttgtgggattctgacctgaactcgccacggcgagtagaggctcccgcctcgcgagtgacccagaa 12903061  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    |||||| | ||||||| | ||||||||||||||||||||||| |||||||||||||||||| |||||| ||| |||||||||||    
T  12903060 acagagtgccttgtta-gattttgcgacctttgttgcacgagctgttgagagttgaacctttgggtaggattaagacttaatga 12902978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 16239610 - 16239876
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaa-tgtag 112  Q
    |||||||||||||||||||||| ||||| |||||| ||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  16239610 cagagagcatgcaagatttcgtaattttgacttttgagttgctccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtag 16239709  T
Q  113 gatgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
     ||||||||||||||||||||||| ||||||  ||||| |||| ||| ||||||||                      ||||||||||||||||||||||    
T  16239710 aatgagattgaacctggaaagatt-tagaatgaaacttgtggattctaacctgaac----------------------tcgcctcgcgagtgacccagaa 16239786  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  16239787 acagagtgacttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaactttggggtagtattaagacttaatgatgatgt 16239876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 296
Target Start/End: Complemental strand, 7089366 - 7089098
Alignment:
Q  17 agagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatg 116  Q
    ||||||||||||||||||| ||||| |||||| |||||| ||||| |||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  7089366 agagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatg 7089267  T
Q  117 agattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaaca 215  Q
    ||||||||||||||| ||           ||||| ||| || ||||||||||| ||||| |||||| |||||||||||||||||||||||||| ||||||    
T  7089266 agattgaacctggaatga-----------aacttatgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaaca 7089178  T
Q  216 gagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    ||| ||||||||| | ||||||||||||||||||| ||||||| |||||||||||||| | |||| ||| |||||||||||    
T  7089177 gagtgtcttgtta-gattttgcgacctttgttgcaagagttgtcgagagttgaacctttgagtagcattaagacttaatga 7089098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 14 - 299
Target Start/End: Complemental strand, 3097135 - 3096861
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||| | ||||| |||||| |||| | ||||| ||| ||| || ||||||||||||||||||||||||||||||||||||||||    
T  3097135 cagagagcatgcaagatttcataattttgacttttgagttaaaccttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 3097036  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||| ||           ||||| ||| || ||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||    
T  3097035 atgagattgaacctggaatga-----------aacttgtgggattctgacctgaactcgccaaggcgagcagaggctctcgcctcgcgagtgacccagaa 3096947  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatga 299  Q
    |||||| | ||||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||| ||  | ||||||||||||    
T  3096946 acagagtgacttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaacctttgggtaggataaatacttaatgatga 3096861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 29 - 281
Target Start/End: Complemental strand, 44102697 - 44102446
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||||||||| |||||| |||||||||||| |||||||||| ||||||| ||||| |||||||||||| ||| ||||||||||||||||||||||||    
T  44102697 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgagcatgtttaataatgattatgaa-gaatgtaggatgagattgaacctg 44102599  T
Q  129 gaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-tt 227  Q
    || ||||| ||||||  ||||||  ||||||||||||||| ||||| |||||| ||||||||||||||||||||||||| |   ||||| |  |||| ||    
T  44102598 gatagattttagaataaaactttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacaga-atacttgttt 44102500  T
Q  228 aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    ||| |||||||| |||||| |||||||| |||||||||||||||||||| ||||    
T  44102499 aggattttgcgatctttgtagcacgagtcgttgagagttgaaccttgggatagt 44102446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 14 - 293
Target Start/End: Original strand, 14052932 - 14053199
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||| |||  |||| |||||| |||||| ||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  14052932 cagagagcatgcaagatt-cgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagg 14053030  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||| |||||           || ||||| ||| || ||||||||||| | ||| |||||| |||||||||||||| |||||||||||||||    
T  14053031 atgagattgaacttggaa-----------ttaaacttgtgggattctgacctgaactcaccatggcgagcagaggctctcgccttgcgagtgacccagaa 14053119  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
    |||||| | ||||||| | ||||||||||||||||||||||||||| |||||||||||| | |||||| ||| ||||||||    
T  14053120 acagagtgacttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaacccttgggtaggattaagacttaa 14053199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 157 - 302
Target Start/End: Complemental strand, 7894060 - 7893915
Alignment:
Q  157 tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagtt 256  Q
    |||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7894060 tctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcatgagtt 7893961  T
Q  257 gttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |  |||||||||||||||||||| |||| |||||||| ||||||||    
T  7893960 gccgagagttgaaccttggggtaatattaagacttaacgatgatgt 7893915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 15552316 - 15552129
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15552316 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 15552217  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||| ||||||||||| | ||||||  || ||| | |||||||||| |||| |||||||||||| |||||||| |||||||||||    
T  15552216 atgagattggacctggaaagact-tagaatcaaaatttggagaatctgacc-gaactcgccacggcgagcagaggctcgcgcctcgcgag 15552129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 38 - 296
Target Start/End: Original strand, 17047726 - 17047972
Alignment:
Q  38 ttttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 137  Q
    |||| |||||| |||||| ||||| |||  ||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||| ||       
T  17047726 ttttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaac-tggaatga--- 17047821  T
Q  138 tagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttg 236  Q
            ||||| ||| || ||||||||||| ||||| |||||| |||||||||||||||||||||||||| ||||||||| | ||||| ||  ||| |    
T  17047822 --------aacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgccttgtgagacttt-g 17047912  T
Q  237 cgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  17047913 cgacctttgttgcacgagttgttgagagttgaacctttgggtagtattaagacttaatga 17047972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 24029244 - 24029057
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||| |||  ||||| ||||||||||||||||||| |||||| |||||||||||||    
T  24029244 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtagg 24029145  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||||| | ||||||  |||||| | |||||||| |||||| ||||| |||||| ||||||||||||||||||||    
T  24029144 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24029057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 13812427 - 13812614
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||| ||||| |||| ||||| || |||||||||||||||| ||||||||||| ||||||||    
T  13812427 cagagagcatgcaagatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtagg 13812526  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||||| | ||||||  |||||| | |||||||| || ||| ||||| |||||| ||||||||||||||||||||    
T  13812527 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctaaactcgccatggcgagcagaggctctcgcctcgcgag 13812614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 20156908 - 20157095
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  20156908 cagagagcatgcaagatttcgtgattttgacttttgagttaatccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 20157007  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttt-tggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||||  | ||||||  ||||||   |||| ||| |||||| ||||| |||| | ||||||||||||||||||||    
T  20157008 atgagattgaacctggaaaggct-tagaatgaaactttgaagaatatga-ctgaactcgccatggcgtgcagaggctctcgcctcgcgag 20157095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 29 - 276
Target Start/End: Original strand, 21815265 - 21815511
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||||||||| |||||| |||||||||||| |||||||||| || |||||||||| ||||||||||||||||| ||| ||| |||| | ||||||||    
T  21815265 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctg 21815364  T
Q  129 gaaagattgtagaattgaac-ttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-t 226  Q
    ||   |||  |||| ||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||  ||||   ||||| || |||| |    
T  21815365 gattaatt-aagaa-tgaactttttggaagctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgtt 21815461  T
Q  227 taggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggg 276  Q
    |||| |||||||| |||  | |||||||| ||||||||||||||||||||    
T  21815462 taggattttgcgatcttcatcgcacgagtcgttgagagttgaaccttggg 21815511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 22633831 - 22634018
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||| | ||| ||||  |||| ||||||||||||||||||| ||||||||||||||||||||    
T  22633831 cagagagcatgcaagatttcgtgattttgacttttgagttgaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 22633930  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||||| | ||||||  |||||| |  |||| ||  ||||| ||||| |||||| ||||||||||||||||||||    
T  22633931 atgagattgaacctggaaagact-tagaatgaaactttggataatcaga-ttgaactcgccatggcgagcagaggctctcgcctcgcgag 22634018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 6190921 - 6190807
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||| ||||||| |||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  6190921 atttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 6190822  T
Q  129 gaaagattgtagaat 143  Q
    |||||||||||||||    
T  6190821 gaaagattgtagaat 6190807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 14 - 200
Target Start/End: Complemental strand, 16597148 - 16596963
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||  || ||||| | |||| | |||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  16597148 cagagagcatgcaagattctgtaattttgatttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 16597049  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcg 200  Q
    ||||||||||||||||||||| | ||||||  || ||| | |||||||||| |||| ||||| |||||||||||| ||||||| ||||    
T  16597048 atgagattgaacctggaaagact-tagaatgaaaatttagagaatctgacc-gaactcgccatggcgagtagaggttctcgccccgcg 16596963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 267
Target Start/End: Original strand, 21814936 - 21815173
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||||||||| |||||| |||||||||||| |||||||||| || |||||||||| ||||||||||||||||||||| ||| |||| | ||||||||    
T  21814936 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctg 21815035  T
Q  129 gaaagattgtagaattgaac-ttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-t 226  Q
    ||   |||  |||| ||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||  ||||   ||||| || |||| |    
T  21815036 gattaatt-aagaa-tgaactttttggaagctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgtt 21815132  T
Q  227 taggtttttgcgacctttgttgcacgagttgttgagagttg 267  Q
    |||| |||||||| |||  | |||||||| |||||||||||    
T  21815133 taggattttgcgatcttcatcgcacgagtcgttgagagttg 21815173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 29 - 267
Target Start/End: Original strand, 21818358 - 21818595
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||||||||| |||||| |||||||||||| |||||||||| || |||||||||| ||||||||||||||||||||| ||| |||| | ||||||||    
T  21818358 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctg 21818457  T
Q  129 gaaagattgtagaattgaac-ttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-t 226  Q
    ||   |||  |||| ||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||  ||||   ||||| || |||| |    
T  21818458 gattaatt-aagaa-tgaactttttggaagctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga-agccttgtt 21818554  T
Q  227 taggtttttgcgacctttgttgcacgagttgttgagagttg 267  Q
    |||| |||||||| |||  | |||||||| |||||||||||    
T  21818555 taggattttgcgatcttcatcgcacgagtcgttgagagttg 21818595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 8846865 - 8846689
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| ||||||| |||| ||| |||||| | ||||||||||||||||||||||||||||||| || || |||||||||||||    
T  8846865 agatttcgtaattttgacttttgagttgattcttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 8846766  T
Q  127 tggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||||| ||||||  |  ||||| || |   |||| ||| ||||| |||||||||||||||||||||||||||    
T  8846765 tggaaagattttagaatgaattttttgtgagttgcaccttaactcgccatggcgagtagaggctctcgcctcgcgag 8846689  T

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Target: chr4; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 161 - 296
Target Start/End: Original strand, 23374125 - 23374259
Alignment:
Q  161 acctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttg 260  Q
    |||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||| | ||||||| | |||||| ||||||||||||||||||||||    
T  23374125 acctgaactcgccacggcgagcagaggctctcgcctcgcgggtgacccagaaacagagtgacttgtta-gattttgcaacctttgttgcacgagttgttg 23374223  T
Q  261 agagttgaaccttggggtagtattgagacttaatga 296  Q
    ||  || |||||| |||||| ||| |||||||||||    
T  23374224 aggattaaacctttgggtagcattaagacttaatga 23374259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 12774488 - 12774313
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||| ||||| || || |||||||||||||    
T  12774488 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaacc 12774389  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    |||| |||   ||||| |||| |||||  | ||| |||||||| ||||| |||||| |||||||||||||||||||||    
T  12774388 tggagagacgttagaa-tgaa-ttttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 12774313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 39705920 - 39706023
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| || |||||||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||||| || ||  | |||||||||||    
T  39705920 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacct 39706019  T
Q  128 ggaa 131  Q
    ||||    
T  39706020 ggaa 39706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 288
Target Start/End: Original strand, 15464580 - 15464822
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattga 146  Q
    ||||||||||  ||| ||| |||||| |||||||| |||| ||||||||||||||||||| | |||  |||||||||||||| ||   ||  ||||| ||    
T  15464580 ttaagttgatatttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctgaaatagtttaagaatgga 15464679  T
Q  147 acttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-ttaggtttttgcgacctttg 245  Q
      ||| ||  |   |||||||| | |||  |||||||||||||||||||||||||||  |||||  |||||  | |||| ||||| |||||| | |||||    
T  15464680 tttttgggtgttacacctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgacttgtttaggattttgcaatctttg 15464779  T
Q  246 ttgcacgagttgttgagagttgaaccttggggtagtattgaga 288  Q
    | |||| |||||||  |||||||||||||| |||||| |||||    
T  15464780 tcgcacaagttgttatgagttgaaccttggagtagtaatgaga 15464822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 282
Target Start/End: Original strand, 52242871 - 52243079
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgcc 173  Q
    ||||||||||||| |||||||||| |||||||| | ||| ||||||||||||||||||   ||  |||||  |   || ||| |   |||||||| ||||    
T  52242871 tgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctggaatagtttaagaatgcattgttgggagttacacctgaactcgcc 52242970  T
Q  174 acggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagagttgaacct 272  Q
    |  |||||||||||||||||||||||||||  |||||  ||||| |  |||| ||||| |||||||| |||||| |||||||| ||  |||||||||| |    
T  52242971 atagcgagtagaggctctcgcctcgcgagttgcccagttacaga-atgcttgtttaggattttgcgatctttgtcgcacgagtcgtaaagagttgaactt 52243069  T
Q  273 tggggtagta 282  Q
    ||||||||||    
T  52243070 tggggtagta 52243079  T

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Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 291
Target Start/End: Complemental strand, 6190782 - 6190688
Alignment:
Q  196 tcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagactt 291  Q
    |||||||||||||| ||| |||| | |||||||| |||| ||||||||||||||||||| ||| |||||||||||||||| |||| ||| ||||||    
T  6190782 tcgcgagtgacccaaaaatagagtgacttgttagatttt-gcgacctttgttgcacgagctgtcgagagttgaaccttggcgtagcattaagactt 6190688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 46 - 202
Target Start/End: Complemental strand, 15099821 - 15099665
Alignment:
Q  46 tttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattg 145  Q
    ||||||| || ||||| ||| |||||| ||||||||| ||| | || |||||||||||||| |||||  |||||||||||||||||   ||  |||| ||    
T  15099821 tttaagtcgaaccttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctggaatagtttaagaa-tg 15099723  T
Q  146 aacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    || ||||| || |   |||||||| ||||| |||||||||||||||||||||||||||    
T  15099722 aatttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgag 15099665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 17046765 - 17046718
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggat 115  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggat 17046718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 13845028 - 13844950
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaaga 106  Q
    |||||||| ||||| ||||||||||||| ||||| ||| |||||| || ||||||||||||||| |||||||| |||||    
T  13845028 gatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgtctgaacatgtctaattatgattagaaaaga 13844950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 43198239 - 43198323
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 131  Q
    ||||||| | ||||| ||| |||||| ||||||||||||| ||||||||||||||||||| | |||  ||||||||||| |||||    
T  43198239 ttaagttaaaccttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaacatggaa 43198323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 14679439 - 14679325
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||  |||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  14679439 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgaatgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14679340  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  14679339 gacaagattgaacct 14679325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 15868286 - 15868368
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 129  Q
    ||||||||| ||||| ||| |||||| |||||||| |||| ||||||||||||||||||  | |||  |||||||||||||||    
T  15868286 ttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgagattgaacctgg 15868368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 3332287 - 3332201
Alignment:
Q  115 tgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||||||||||||||| | ||||||  |||||| | ||||||||| ||||| ||||| |||||| ||||||||||||||||||||    
T  3332287 tgagattgaacctggaaagact-tagaatgaaactttggagaatctgac-tgaactcgccatggcgagcagaggctctcgcctcgcgag 3332201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 14685646 - 14685534
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    |||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||||    
T  14685646 agagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtagga 14685547  T
Q  115 tgagattgaacct 127  Q
    | |||||||||||    
T  14685546 taagattgaacct 14685534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 23838910 - 23838796
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  23838910 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 23838811  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  23838810 gacaagattgaacct 23838796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 15190788 - 15190703
Alignment:
Q  46 tttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 131  Q
    ||||||| || ||||| ||| |||||| |||||||||||||||||| |||||||| ||||  | |||  ||||||| |||||||||    
T  15190788 tttaagtcgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagatttaacctggaa 15190703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 13424 - 13506
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 129  Q
    ||||||||| | ||| ||| |||||| |||||||||| || |||||||||||||| |||  | |||  |||||||||||||||    
T  13424 ttaagttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgg 13506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 386038 - 386096
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||| |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  386038 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 386096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 3332321 - 3332287
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaactttt 48  Q
    |||||||||||||||||||||||||||| ||||||    
T  3332321 cagagagcatgcaagatttcgtgattttgactttt 3332287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 7900855 - 7900913
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||| |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  7900855 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 7900913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 15321778 - 15321836
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||| |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  15321778 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 15321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 51493502 - 51493560
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||| |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  51493502 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 51493560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 281
Target Start/End: Complemental strand, 15371467 - 15371438
Alignment:
Q  252 gagttgttgagagttgaaccttggggtagt 281  Q
    ||||||||||||||||||||||||||||||    
T  15371467 gagttgttgagagttgaaccttggggtagt 15371438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 281
Target Start/End: Complemental strand, 15373748 - 15373719
Alignment:
Q  252 gagttgttgagagttgaaccttggggtagt 281  Q
    ||||||||||||||||||||||||||||||    
T  15373748 gagttgttgagagttgaaccttggggtagt 15373719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 281
Target Start/End: Complemental strand, 16223797 - 16223768
Alignment:
Q  252 gagttgttgagagttgaaccttggggtagt 281  Q
    ||||||||||||||||||||||||||||||    
T  16223797 gagttgttgagagttgaaccttggggtagt 16223768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 32851921 - 32851868
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattag 100  Q
    ||||||||| ||||| ||| |||||| |||||||| |||| |||||||||||||    
T  32851921 ttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattag 32851868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 35171044 - 35170991
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  35171044 tgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 35170991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Complemental strand, 40471890 - 40471837
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||||||  ||| || |||||||||| ||||||||||| |||||||||||    
T  40471890 tgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacct 40471837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 15190664 - 15190632
Alignment:
Q  170 cgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||| |||||||||||||||||||||||||||    
T  15190664 cgccatggcgagtagaggctctcgcctcgcgag 15190632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 16956279 - 16956379
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    ||||||||||||  |||||| ||| |||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  16956279 gcagagagcatgttagattttgtgttttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 16956378  T
Q  113 g 113  Q
    |    
T  16956379 g 16956379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 20157130 - 20157182
Alignment:
Q  235 tgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgag 287  Q
    ||||| |||||| ||||||||||||  ||||||||||||||| ||||| ||||    
T  20157130 tgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgag 20157182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 24029022 - 24028970
Alignment:
Q  235 tgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgag 287  Q
    ||||| |||||| ||||||||||||  ||||||||||||||| ||||| ||||    
T  24029022 tgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgag 24028970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 26284598 - 26284650
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  26284598 tgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 26284650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 201
Target Start/End: Original strand, 39706052 - 39706092
Alignment:
Q  161 acctgaacacgccacggcgagtagaggctctcgcctcgcga 201  Q
    |||||||| ||||| ||||||||||||| ||||||||||||    
T  39706052 acctgaactcgccatggcgagtagaggccctcgcctcgcga 39706092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 40478563 - 40478511
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  40478563 tgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 40478511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 181; Significance: 8e-98; HSPs: 5)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 40359 - 40072
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  40359 cagagagcatgcaagatttcgtgattttgacttttgagttgatccgtagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggagg 40260  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||||||||||||||||||||||  |||||||||  ||| ||||| || |||||||||||| |||||||||||||||||| |||||| |||||    
T  40259 atgagattgaacctggaaagattgtagaatgaaacttttggtttctaacctgtactcgccacggcgagcagaggctctcgcctcgcgggtgacctagaaa 40160  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    | ||| | ||||||| | |||||||||||||||||||| | ||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  40159 ccgagtgccttgttatgattttgcgacctttgttgcacaatttgttgagagttgaacctt-gggtagcattgagacttaatgaggatgt 40072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 39549 - 39678
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||| ||||||| ||||||| |||||| |||||||||||| |||||||||| | |||||||||||||| ||||||||||||||||||||||     
T  39549 cagagagcatgccagatttcatgattttgacttttgagttgatccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtaga 39648  T
Q  114 atgagattgaacctggaaagattgtagaat 143  Q
    ||||||||||||||||||||| ||||||||    
T  39649 atgagattgaacctggaaagaatgtagaat 39678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 26662 - 26555
Alignment:
Q  80 aacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcg 179  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||| |||||||||||  ||||||||||    
T  26662 aacatgtctaataatgattaggaaagaatgtaggatgagattaaacctggaaagattgtagaatgaaacttttggattctgacctgaagtcgccacggcg 26563  T
Q  180 agtagagg 187  Q
    || |||||    
T  26562 agcagagg 26555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 199 - 302
Target Start/End: Complemental strand, 26213 - 26110
Alignment:
Q  199 cgagtgacccagaaacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatg 298  Q
    ||||||||||||||||  || | ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |    
T  26213 cgagtgacccagaaaccaagtgccttgttaggattttgcgacctttgttgcacgatttgttgagagttgaaccttggggtagcattgagacttaatgagg 26114  T
Q  299 atgt 302  Q
    ||||    
T  26113 atgt 26110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 202
Target Start/End: Original strand, 59181 - 59308
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgc 172  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| | ||||||  || ||| | ||| |||||| |||| |||    
T  59181 tgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacctgaaaagact-tagaatgaaaatttagagaacctgacc-gaactcgc 59278  T
Q  173 cacggcgagtagaggctctcgcctcgcgag 202  Q
    || |||||| ||||||||||||||||||||    
T  59279 catggcgagcagaggctctcgcctcgcgag 59308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 181; Significance: 8e-98; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 2353 - 2066
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2353 agagagcatccaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 2254  T
Q  115 tgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||||||||||||||||||||||  ||||| | ||| |||||||||||| ||||| |||||||||||||| ||||||| ||||||||||  |||    
T  2253 tgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccatggcgagtagaggctatcgcctcacgagtgaccctaaaa 2154  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| | ||||||| | ||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||| |||||    
T  2153 cagagtgccttgtta-gattttgtgacctttgttgcacgagttgtcgagagttgaaccttgggatagtattaagacttaatgaggatgt 2066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 38 - 202
Target Start/End: Original strand, 207161 - 207324
Alignment:
Q  38 ttttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 137  Q
    |||| |||||| |||||| ||||| |||| ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |     
T  207161 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaaagact- 207259  T
Q  138 tagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||  |||||| | |||||||| |||||| ||||| |||||| ||||||||||||||||||||    
T  207260 tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 207324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 207359 - 207411
Alignment:
Q  235 tgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgag 287  Q
    ||||| |||||| ||||||||||||  ||||||||||||||| ||||| ||||    
T  207359 tgcgatctttgtcgcacgagttgttatgagttgaaccttgggatagtaatgag 207411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 176; Significance: 8e-95; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 15 - 281
Target Start/End: Complemental strand, 16588 - 16323
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    |||||||||||||||||||  |||||| |||||| ||||||||||||   |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16588 agagagcatgcaagatttcaagattttgacttttgagttgatccttagg-gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagga 16490  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
     |||||||||||||||||||||||||||||||| ||||||||| |||| |||| | |||||||||||  |||||| ||| |||||| |||||||||||||    
T  16489 cgagattgaacctggaaagattgtagaattgaa-ttttggaattctgaactgagctcgccacggcgatcagaggccctcacctcgcaagtgacccagaaa 16391  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16390 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttgaggtagt 16323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 292
Target Start/End: Original strand, 32577 - 32855
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| ||| || ||||| |||||||||| || ||||||||||||||||||||||||||| || || ||     
T  32577 cagagagcttgcaagatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggaga 32676  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||| ||||||| ||||| |||| ||||| || |   |||  ||| |||||| ||||| |||||||| |||||||||||||||||| ||    
T  32677 atgagattgaacctgtaaagattttagaa-tgaatttttgtgagttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataa 32775  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagactta 292  Q
    |||||  ||||||||||| |||||||| || ||| |||| | ||||| |||||||||||||||||||||||||| |||||    
T  32776 acagaatgtcttgttaggattttgcgatctgtgtcgcaccaattgttaagagttgaaccttggggtagtattgaaactta 32855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 292
Target Start/End: Complemental strand, 46428 - 46150
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| ||| || ||||| |||||||||| || ||||||||||||||||||||||||||| || || ||     
T  46428 cagagagcttgcaagatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggaga 46329  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||| ||||||| ||||| |||| ||||| || |   |||  ||| |||||| ||||| |||||||| |||||||||||||||||| ||    
T  46328 atgagattgaacctgtaaagattttagaa-tgaatttttgtgagttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataa 46230  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagactta 292  Q
    |||||  ||||||||||| |||||||| || ||| |||| | ||||| |||||||||||||||||||||||||| |||||    
T  46229 acagaatgtcttgttaggattttgcgatctgtgtcgcaccaattgttaagagttgaaccttggggtagtattgaaactta 46150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 173; Significance: 5e-93; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 5010 - 4722
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| |    
T  5010 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 4911  T
Q  115 tgagattgaacctggaaaga-ttgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||||||||||||| || ||||||  |||||| |||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||||||||    
T  4910 tgagattgaacctggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaa 4811  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||| |   || |||||| |||||||| |  ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4810 cagggtacctagttaggattttgcgatcagtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 4722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 12592 - 12304
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| |    
T  12592 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 12493  T
Q  115 tgagattgaacctggaaaga-ttgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||||||||||||| || ||||||  |||||| |||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||||||||    
T  12492 tgagattgaacctggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaa 12393  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||| |   || |||||| |||||||| |  ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12392 cagggtacctagttaggattttgcgatcagtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 12304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 22544 - 22256
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| |    
T  22544 agagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaa 22445  T
Q  115 tgagattgaacctggaaaga-ttgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||||||||||||| || ||||||  |||||| |||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||||||||    
T  22444 tgagattgaacctggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaa 22345  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||| |   || |||||| |||||||| |  ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  22344 cagggtacctagttaggattttgcgatcagtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 22256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 15 - 302
Target Start/End: Original strand, 23921 - 24207
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||| || ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  23921 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagga 24020  T
Q  115 tgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    |||||||||||||||||| ||||||||||  ||||| | ||| |||||||||||| |||||| ||||| ||||||||||||||||||||||||| |||||    
T  24021 tgagattgaacctggaaa-attgtagaatgaaacttgtgggattctgacctgaactcgccacagcgagcagaggctctcgcctcgcgagtgacctagaaa 24119  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    || || | ||||||| | ||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| ||||||| ||| |||||    
T  24120 caaagtgccttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaactttgggatagtattaagacttattgaggatgt 24207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 168; Significance: 5e-90; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 24 - 302
Target Start/End: Original strand, 16227 - 16506
Alignment:
Q  24 gcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattga 123  Q
    |||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  16227 gcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattga 16326  T
Q  124 acctggaaagattgtagaattgaacttttgg-aatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtc 222  Q
    ||||||||||||| | ||||  ||| ||||| ||||| |||||||| ||||| |||||| ||||||||||||||||||||||||||| |||||||| | |    
T  16327 acctggaaagattttcgaatgaaacgtttggaaatctaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgcc 16426  T
Q  223 ttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||| || |||||||| || ||| |||| |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  16427 ttgttgggattttgcgatctgtgtcgcacaagttgttaggagttgaaccttggggtagtattgagacttaatgatgatgt 16506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 5739 - 6027
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  5739 cagagagcatgcaagatttcgtgttttttacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagg 5838  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttt--tggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccaga 211  Q
    |||||||||||||||| |||||| | ||| |||| |||   ||| ||||||||||||  ||||||||||| ||||||||||||||||  |||||||||||    
T  5839 atgagattgaacctgggaagattattgaa-tgaaatttgcgggattctgacctgaacttgccacggcgagcagaggctctcgcctcgttagtgacccaga 5937  T
Q  212 aacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||||| | ||||||| | ||||||||||||||||||||||||| | |||||| |||||||||| ||| ||| |||||||||||||||||    
T  5938 aacagagtgccttgtta-gattttgcgacctttgttgcacgagttatcgagagtggaaccttgggatagcattaagacttaatgatgatgt 6027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 29 - 291
Target Start/End: Original strand, 51517 - 51779
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  51517 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 51616  T
Q  129 gaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgtt 227  Q
    |||||||||| ||||  ||||| | ||| | |||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||| | ||||||    
T  51617 gaaagattgtcgaatgaaacttgtgggattttgacctgaactcgccacggcgagcagaggctctcacctcgctagtgacccagaaacagagtgacttgtt 51716  T
Q  228 aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagactt 291  Q
    | | ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  51717 a-gattttgcgacctttgttgcacgagttgtcgagagttgaaccttggggtagcattaagactt 51779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 268
Target Start/End: Complemental strand, 33006 - 32784
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattga 146  Q
    ||||||||| | ||| ||| || ||| ||||||||||||| ||||||||||||||||||| | |||  ||||||||||| |||||   |   ||||| ||    
T  33006 ttaagttgaactttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctagattgagattgaacttggaatagtctaagaatgga 32907  T
Q  147 acttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtt-tttgcgacctttg 245  Q
      ||| ||| |   |||||||| ||||| ||||||||||||| |||||||||||||  ||||||  |||||  | |||||| ||||   ||||| |||||    
T  32906 tttttgggagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccagttacagaatgccttgttgggttaaatgcgatctttg 32807  T
Q  246 ttgcacgagttgttgagagttga 268  Q
    | |||||||||| || |||||||    
T  32806 tcgcacgagttgatgtgagttga 32784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 407 - 163
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  407 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 308  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttgga-atctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||||||| ||||||  ||||||| ||  |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  307 atgagattgaacctggaaagatt-tagaatgaaactttttgagttctgacctgaactcgccacagcgagtagaggctctcgccacgcgagtgacccagaa 209  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgt 258  Q
    |||||| | ||||||||| |||||||| || ||| |||| ||||||    
T  208 acagagtgccttgttaggattttgcgatctgtgtcgcacaagttgt 163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 158; Significance: 4e-84; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 301
Target Start/End: Original strand, 580 - 868
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||     
T  580 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaga 679  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccaga 211  Q
    | ||||||||||||||     | | |||||  ||||| |||||| |||||||||||| ||||| |||||| ||||| || ||||||| |||||||| |||    
T  680 acgagattgaacctggtttagtag-agaatgaaacttgttggaaatctgacctgaactcgccatggcgagcagaggttcccgcctcgtgagtgacctaga 778  T
Q  212 aacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatg 301  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||    
T  779 aacagagagtcttgttaggatttttcgacctttgttgcacgagctgttgagagttgaaccttgaggtagtattgagacttaatggtgatg 868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 8110 - 8227
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| | || | |||| | ||||  ||| || |||  ||||||||||||  ||||||||||||| |||  | |||     
T  8110 cagagagcttgcaagatttcgtgattttgagttgtgagtttaaccttggatgtttatgagggcctgaacatgtacaataatgattaggcaaggttttaga 8209  T
Q  114 atgagattgaacctggaa 131  Q
    |||||||||||| |||||    
T  8210 atgagattgaacttggaa 8227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 13703 - 13426
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  13703 cagagagcatgcaagatttcgtgattttgacttttgagttgatccttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtagg 13604  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttgg-aatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||| ||||||||||| ||           ||||| ||| | |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  13603 atgagactgaacctggaatga-----------aacttgtggcattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaa 13515  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
     ||||| | ||||||| | ||||||||||||||||||||||||||| || |||||||||||||| ||| ||| |||||||||||||||||    
T  13514 tcagagtgccttgtta-gattttgcgacctttgttgcacgagttgtcgacagttgaaccttgggatagcattaagacttaatgatgatgt 13426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 146; Significance: 6e-77; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 14 - 296
Target Start/End: Original strand, 678 - 949
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  678 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagg 777  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||||||    |||||| | | |||     | ||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  778 atgagattgaacct----agattgaa-acttg-----tgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaa 867  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    ||||| | ||||||| | |||||||||||||||||||||| |||| |||||||||||||| |||||| ||| |||||||||||    
T  868 cagagtgacttgtta-gattttgcgacctttgttgcacgaattgtcgagagttgaacctttgggtagcattaagacttaatga 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 14 - 294
Target Start/End: Original strand, 10055 - 10324
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| | |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10055 cagagagcatgcaagatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 10154  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||           ||||| ||||| | ||| |||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||    
T  10155 atgagattgaacctg-----------gaattaaacttgtgggattctgacctgaactcgccacggggagcagaggctctcgcctcgcgagtgacccagaa 10243  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaat 294  Q
    |||||| | ||||||| | |||||||||| |||||||||||||||| |||||||||||| | |||||| ||| |||||||||    
T  10244 acagagtgacttgtta-gattttgcgaccattgttgcacgagttgtcgagagttgaacccttgggtagaattaagacttaat 10324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 134; Significance: 9e-70; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 5026 - 4738
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||| |||||||||| |||||| ||||| |||||||||| ||||| |||||||||| |||||| |||| |||| |||||     
T  5026 cagagagcttgcaagatttcgtgactttaacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtaga 4927  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||| ||||||| ||||| ||||||||||   ||| ||||||  | ||||| |||||| | ||||||||||||||| ||  ||||||||    
T  4926 atgagattgaacctgaaaagattttagaa-tgaacttttgtcgatcagacctgtcctcgccatggcgagcaaaggctctcgcctcgcaagctacccagaa 4828  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||||  | | ||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |||||    
T  4827 acagaatgccatgttaggattttgcgacctttgttgcacgagttgttaagagttgaaccttgaggtagtattgagacttattgaagatgt 4738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 131; Significance: 6e-68; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 14 - 293
Target Start/End: Complemental strand, 428 - 159
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  428 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 329  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||| |||           ||||| ||||| | ||| |||||||||||| ||||| |||||| ||||||||||||||||| ||||||||| ||    
T  328 atgagattgaatctg-----------gaattaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataa 240  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
      |||| | |||||||| ||||||| |||||||||||||||||||| || ||||||||||| |||||| ||| ||||||||    
T  239 taagagtgacttgttagatttttgcaacctttgttgcacgagttgtcgacagttgaacctttgggtaggattaagacttaa 159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 14 - 293
Target Start/End: Complemental strand, 5204 - 4935
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5204 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 5105  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||| |||           ||||| ||||| | ||| |||||||||||| ||||| |||||| ||||||||||||||||| ||||||||| ||    
T  5104 atgagattgaatctg-----------gaattaaacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgcctcgcaagtgacccataa 5016  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
      |||| | |||||||| ||||||| |||||||||||||||||||| || ||||||||||| |||||| ||| ||||||||    
T  5015 taagagtgacttgttagatttttgcaacctttgttgcacgagttgtcgacagttgaacctttgggtaggattaagacttaa 4935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 266
Target Start/End: Original strand, 1696 - 1947
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| |||||||||  |||||||| |||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||     
T  1696 cagagagcttgcaagattctgtgattttgacttttgagttgatccttagatg-ttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 1794  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||||||||||||||| ||||||  |||||| | |||||||||||||  ||||| |||||| ||||||||||||||||||||||||||||  |    
T  1795 atgagattgaacctggaaagattttagaatgaaactttggaaatctgacctgaattcgccatggcgagcagaggctctcgcctcgcgagtgacccagtta 1894  T
Q  214 cagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagagtt 266  Q
    |||| |  |||| ||||| |||||||| |||||| |||||||| ||||||||||    
T  1895 caga-atgcttgtttaggattttgcgatctttgtcgcacgagtcgttgagagtt 1947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 631 - 835
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| || ||||||| |||||||| || ||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  631 cagagagcttgtaagattttgtgattttgaccttcgagttgatccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 730  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttgg-aatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||||||||||| |||||||| |||  |||||||||||||||||||||||||||||    
T  731 atgagattgaatctgaaaagattgtagaa-tgaacttttggaaatctgacctgaactcgccacggtgagcggaggctctcgcctcgcgagtgacccagaa 829  T
Q  213 acagag 218  Q
    ||||||    
T  830 acagag 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 230 - 302
Target Start/End: Original strand, 2985 - 3057
Alignment:
Q  230 gtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2985 gtttttgcgacctgtgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 3057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 14 - 281
Target Start/End: Original strand, 15233 - 15500
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||| |||||||||| |||||| |||||||||||| |||||||||| |||||||| |||| |||||||||||||||||||||||||     
T  15233 cagagagcatgcaagatatcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtaga 15332  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||| ||||| ||||| ||||||  |||||| |||||||||||||||| |||||  ||||| ||||||||||||||||||||||||| |   |    
T  15333 atgagattgaatctggatagattttagaatgaaactttgggaatctgacctgaactcgccatagcgagcagaggctctcgcctcgcgagtgacctattta 15432  T
Q  214 cagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    || | |  |||| ||||| |||| ||| |||||| |||||| | |||||||||||||||||||||||||    
T  15433 ca-aaatacttgcttaggatttttcgatctttgtcgcacgaatcgttgagagttgaaccttggggtagt 15500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 293
Target Start/End: Original strand, 681 - 949
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||| |||||||||||  |||| |||||| |||||| ||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  681 cagagagcattcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagg 780  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||           ||||| ||||| ||||| |||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  781 atgagattgaacctg-----------gaattaaacttgtggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtaacccagaa 869  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
    |||||| | ||||||| | |||||| ||||||||||||||| |||| |||||||||||| | |||||| ||| || |||||    
T  870 acagagtgacttgtta-gattttgcaacctttgttgcacgatttgtcgagagttgaacccttgggtaggattaagtcttaa 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 297
Target Start/End: Complemental strand, 2444 - 2172
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||| ||||| ||||||||| ||||||||||| |||||||| |||||||||    
T  2444 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtagg 2345  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||           || |||||  || || ||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  2344 atgagattgaacctggaa-----------ttaaacttgagggatgctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaa 2256  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgat 297  Q
    |||||| | | |||||| |||| ||||||||||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||    
T  2255 acagagtgacatgttagatttt-gcgacctttgttgcacgagttgtcgagagttgaacctttgggtaggattaagacttaatgat 2172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 14 - 293
Target Start/End: Complemental strand, 13987 - 13719
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||     
T  13987 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagc 13888  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||           ||||| ||||| || || ||||| |||||| |||||||||||| |||||||||||||||||||| |||||||||    
T  13887 atgagattgaacctg-----------gaattaaacttgtgagattctgagctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacccagaa 13799  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
    |||||| | ||||||| | ||||||||| ||||||||||||||||| ||||||||||||||  ||||| ||| ||||||||    
T  13798 acagagtgacttgtta-gattttgcgacttttgttgcacgagttgtcgagagttgaacctttcggtaggattaagacttaa 13719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 14 - 302
Target Start/End: Complemental strand, 10661 - 10378
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||||| ||||| |||||| ||| || ||||||||||||||||        
T  10661 cagagagcttgcaagatttcgtgattttgacttttgagttgatccttagatgcttttgagtgccttaacatgcctagtagtgattaggaaagaatg---- 10566  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaa--tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccaga 211  Q
       |||||||||||||||||||| ||||||  ||  |||  ||  |||||||||||| |||||||||||| ||||  || |||||||||||||||| |||    
T  10565 ---agattgaacctggaaagattttagaatgaaaaattttcaaattctgacctgaactcgccacggcgagcagagcttcccgcctcgcgagtgacctaga 10469  T
Q  212 aacagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||| || | ||||||||| |||||||| || ||| |||| ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  10468 aacaaagtgccttgttaggattttgcgatctgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaataatgatgt 10378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 14 - 294
Target Start/End: Original strand, 15094 - 15363
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||||||||||||| || || |||||||||| ||||| || |||||||||||||||||||||||||||||||    
T  15094 cagagagcatgcaagatttcgtatttttgacttttaagttgaaccgtagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtagg 15193  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||||||||||      || || |    | | ||| |||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||    
T  15194 atgagattgaacctggaa------taaaact----tgtaggattctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccagaaa 15283  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaat 294  Q
    ||||| | ||||||| | ||||||||||||||||||||||||||| |||||||||  | | |||||| ||| |||||||||    
T  15284 cagagtgacttgtta-gattttgcgacctttgttgcacgagttgtcgagagttgactcgttgggtaggattaagacttaat 15363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 32894 - 32968
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtct 88  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| ||||||||||||||||||||||||||    
T  32894 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgaatgcctgaacatgtct 32968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 17626 - 17893
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||| ||||||| |||||| |||| | ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17626 cagagagcatgcaagatttcatgattttgacttttgagttaaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 17725  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||| ||||||||||||  ||||| | ||| |||||||||||| ||||||||||                     ||| ||||||||    
T  17726 atgagattgaacctggatagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcg---------------------agtcacccagaa 17804  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    | |||| | ||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||| |||||    
T  17805 atagagtgacttgttagg-ttttgcgacctttgttgcacgagttgttgagaattgaacctttgggtagtattaagacttaatgaggatgt 17893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 29 - 273
Target Start/End: Complemental strand, 17268 - 17024
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  17268 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17169  T
Q  129 gaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-tt 227  Q
    || ||||| ||||||  ||||||  |||| |||||||||| ||||| |||||| ||||||||||||||||||||||||| |   ||||| |  |||| ||    
T  17168 gatagattttagaataaaactttgagaatatgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacaga-atacttgttt 17070  T
Q  228 aggtttttgcgacctttgttgcacgagttgttgagagttgaacctt 273  Q
    ||| |||||||| |||||| |||||||| ||||| |||||||||||    
T  17069 aggattttgcgatctttgtagcacgagtcgttgatagttgaacctt 17024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 7471 - 7576
Alignment:
Q  96 attaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgc 194  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||  |||||| |  ||||||| |||||| ||||| ||| || ||||||||||||    
T  7471 attaggaaagaatgtaggatgagattgaacctggaaagact-tagaatgaaactttggataatctga-ctgaactcgccatggcaagcagaggctctcgc 7568  T
Q  195 ctcgcgag 202  Q
    ||||||||    
T  7569 ctcgcgag 7576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 43 - 299
Target Start/End: Original strand, 11171 - 11416
Alignment:
Q  43 acttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaa 142  Q
    |||||| |||||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||            
T  11171 acttttgagttgaaccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaatga-------- 11262  T
Q  143 ttgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgcgacc 241  Q
       ||||| ||| || ||||||||||| ||||| |||||| |||||||||| ||||||||||||| |||||||| || | |||||||| |||| ||||||    
T  11263 ---aacttgtgggatactgacctgaactcgccaaggcgagaagaggctctcacctcgcgagtgacacagaaacaaagtgacttgttagatttt-gcgacc 11358  T
Q  242 tttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatga 299  Q
    ||||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||||    
T  11359 tttgttgcacgagttgtagagagttgaacctttgggtagaattaagacttaatgatga 11416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 14109 - 14055
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattagg 101  Q
    ||||||||| ||||| ||| |||||| |||||||| |||| ||||||||||||||    
T  14109 ttaagttgaaccttagatgattttgagtgcctgaatatgtataataatgattagg 14055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 119; Significance: 8e-61; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 20615 - 20426
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||| | |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  20615 cagagagcatgcaagatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaga 20516  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttgga-atctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    || |||||||||||||||||||| ||||||  ||||||||||  |||||||||| | ||||||| |||| |||||||||||||||||||||    
T  20515 ataagattgaacctggaaagatt-tagaatgaaacttttggagttctgacctgagctcgccacgacgagcagaggctctcgcctcgcgagt 20426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 15 - 296
Target Start/End: Complemental strand, 5339 - 5070
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    |||||||||||||||||| || ||||| |||||| |||||| ||||| |||||||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  5339 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtagga 5240  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaa 213  Q
    ||||||||||||||||| ||           ||||| || |  |||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||    
T  5239 tgagattgaacctggaatga-----------aacttgtgaggttctgacctgaactcgccacggcgagtagaggctcttgcctcgcgagtgacctagaaa 5151  T
Q  214 cagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    ||||| | ||||||||  |||||| ||||||||||||||||||||||||  || |||||| || ||| | | |||||||||||    
T  5150 cagagtgacttgttag--ttttgccacctttgttgcacgagttgttgaggattaaacctttggctagcaataagacttaatga 5070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 14 - 294
Target Start/End: Original strand, 4760 - 5029
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  4760 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 4859  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||           ||||||||||| | ||| |||||||||||| |||||  | ||| ||||| |||||||||||||||||| |||||    
T  4860 atgagattgaacctg-----------gaattgaacttatgggattctgacctgaactcgccaaagagagcagaggatctcgcctcgcgagtgacacagaa 4948  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaat 294  Q
    |||||| | ||| || || ||||| ||||||||||||||||||||| |||||||||||| | |||||| ||| ||| |||||    
T  4949 acagagtgacttatt-ggattttgagacctttgttgcacgagttgtcgagagttgaacccttgggtaggattaagatttaat 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 297
Target Start/End: Complemental strand, 7102 - 6830
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||| |||||||||| |  |||| |||||| |||||| ||||| |||| ||||| ||||||||| ||||||||||| |||||||| |||||||||    
T  7102 cagagagcacgcaagatttcatatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtagg 7003  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    ||||||||||||||||||           || |||||  || || ||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||    
T  7002 atgagattgaacctggaa-----------ttaaacttgagggatgctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataa 6914  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgat 297  Q
    |||||| | | ||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||| ||| ||| ||||||||    
T  6913 acagagtgacatgtta-gattttgcgacctttgttgcacgagttgtcgagagttgaacctttgggtaggattaagatttaatgat 6830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 299
Target Start/End: Complemental strand, 16771 - 16497
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16771 cagagagcatgcaagatttcgtacttttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 16672  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    | |||||||||||||            |||| ||||| | ||| | ||||| |||| || ||||||||| ||||||||||||||||||||||||| ||||    
T  16671 acgagattgaacctg-----------aaattaaacttatgggattttgaccagaactcggcacggcgagcagaggctctcgcctcgcgagtgacctagaa 16583  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatga 299  Q
    |||||| | |||||| || ||||| |||||||||||||||| || | |||||||||||  | |||||| ||| ||||||||| ||||    
T  16582 acagagtgacttgtt-ggattttgtgacctttgttgcacgatttctcgagagttgaacgcttgggtaggattaagacttaataatga 16497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 281
Target Start/End: Original strand, 20044 - 20310
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||| |||||||||| | ||||||||||| ||||||||| |||||||||||||||     
T  20044 cagagagcatgcaagatttcgtgaatttgacttttgagttgatccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtaga 20143  T
Q  114 atgagattgaacctggaaagattgtagaattgaac-ttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||||   |||  |||| ||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||| |||  || |       
T  20144 atgagattgaacctggattaatt-aagaa-tgaactttttggaagctgacctgaactcgccatggcgagtagaggctctcgcctcgcaagttgcctaatt 20241  T
Q  213 acagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    ||||| || |||| ||||| |||||||  |||||| |||||||| |||||||||||||||||||| ||||    
T  20242 acaga-agccttgtttaggattttgcggtctttgtcgcacgagtcgttgagagttgaaccttgggatagt 20310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 293
Target Start/End: Complemental strand, 32553 - 32288
Alignment:
Q  17 agagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatg 116  Q
    |||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  32553 agagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatg 32454  T
Q  117 agattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaaca 215  Q
    ||||||||||||           ||||| ||||| | ||| |||||| |||||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  32453 agattgaacctg-----------gaattaaacttgtgggattctgacttgaacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaaca 32365  T
Q  216 gagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
    |||   ||| ||  | |||||||||||||||||| | |||||| |||||||||||| | |||||| ||| ||||||||    
T  32364 gagttactt-ttttgattttgcgacctttgttgctctagttgtcgagagttgaacccttgggtaggattaagacttaa 32288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 129 - 302
Target Start/End: Complemental strand, 39864 - 39691
Alignment:
Q  129 gaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgtt 227  Q
    ||||||||||||||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| | |||||     
T  39864 gaaagattgtagaat-gaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtc 39766  T
Q  228 aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||| |||||||| || ||| |||| ||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  39765 aggattttgcgatctgtgtcgcacaagttgttaagggttgaaccttggggtagtattgagacttaataatgatgt 39691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 129 - 302
Target Start/End: Original strand, 74948 - 75121
Alignment:
Q  129 gaaagattgtagaattgaacttttggaa-tctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgtt 227  Q
    ||||||||||||||| |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| | |||||     
T  74948 gaaagattgtagaat-gaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtc 75046  T
Q  228 aggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    ||| |||||||| || ||| |||| ||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  75047 aggattttgcgatctgtgtcgcacaagttgttaagggttgaaccttggggtagtattgagacttaataatgatgt 75121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 14 - 143
Target Start/End: Original strand, 18576 - 18705
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| |||||||| |||||| || ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18576 cagagagcatgcaagattttgtgattttgacttttgagatgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 18675  T
Q  114 atgagattgaacctggaaagattgtagaat 143  Q
    ||||||||||||||||||||||||||||||    
T  18676 atgagattgaacctggaaagattgtagaat 18705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 106; Significance: 5e-53; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 38 - 296
Target Start/End: Complemental strand, 3949 - 3702
Alignment:
Q  38 ttttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 137  Q
    |||| |||||| |||||| ||||| |||  ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||       
T  3949 ttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaatga--- 3853  T
Q  138 tagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttg 236  Q
            ||||| ||| || ||||||||||| ||||| |||||| ||||||||||| |||||||||||||| ||||||||| | ||||| ||  ||| |    
T  3852 --------aacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtgagacttt-g 3762  T
Q  237 cgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
     |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  3761 tgacctttgttgcacgagttgttgagagttgaacctttgggtagtattaagacttaatga 3702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 38 - 296
Target Start/End: Complemental strand, 8013 - 7766
Alignment:
Q  38 ttttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 137  Q
    |||| |||||| |||||| ||||| |||  ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||       
T  8013 ttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaatga--- 7917  T
Q  138 tagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttg 236  Q
            ||||| ||| || ||||||||||| ||||| |||||| ||||||||||| |||||||||||||| ||||||||| | ||||| ||  ||| |    
T  7916 --------aacttgtgggattctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagtgacccggaaacagagtgccttgtgagacttt-g 7826  T
Q  237 cgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
     |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  7825 tgacctttgttgcacgagttgttgagagttgaacctttgggtagtattaagacttaatga 7766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 27293 - 27375
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 129  Q
    ||||||||| | ||| ||| |||||| ||||||||||||| |||||||||||||| |||  | |||  |||||||||||||||    
T  27293 ttaagttgaactttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctgg 27375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 21392 - 21126
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    |||||||||||||||||| || ||||| |||||| |||||| ||||| ||| |||| | |||||||||||||||||||||||||| ||||||||||||||    
T  21392 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtagga 21293  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaac 214  Q
    |||||||| |||||||| ||           ||||| |         ||||||| |||||||||||| |||||||||||||||| |||||||||| ||||    
T  21292 tgagattgtacctggaatga-----------aacttgt---------cctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccaaaaac 21213  T
Q  215 agagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||| | ||||||  ||||| |||||||||||||||||||||| | ||||||||||||| |||||||||| ||||||||||| |||||    
T  21212 agagtgacttgttgagtttt-gcgacctttgttgcacgagttgatcagagttgaacctttgggtagtattaagacttaatgaagatgt 21126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 38 - 296
Target Start/End: Complemental strand, 1382 - 1135
Alignment:
Q  38 ttttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattg 137  Q
    |||| |||||| |||||| ||||| |||| ||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||       
T  1382 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctggaatga--- 1286  T
Q  138 tagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttg 236  Q
            ||||| ||| || |||||| |||| ||||| |||||| ||||||||||||||| |||||||||| |||||| || | ||||| ||  ||| |    
T  1285 --------aacttgtgggattctgaccagaactcgccatggcgagcagaggctctcgcctcacgagtgacccggaaacaaagtgccttgtgagacttt-g 1195  T
Q  237 cgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatga 296  Q
    |||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||    
T  1194 cgacctttgttgcacgagttgttgagagttgaacttttgggtagtattaagacttaatga 1135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 2703 - 2826
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2703 cagagagcttgcaagatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 2802  T
Q  114 atgagattgaacctggaaagattg 137  Q
    ||||||||||||||||||||||||    
T  2803 atgagattgaacctggaaagattg 2826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 124 - 302
Target Start/End: Complemental strand, 28223 - 28045
Alignment:
Q  124 acctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtc 222  Q
    ||||||||||||| ||||||  ||||||| |||| ||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| | |    
T  28223 acctggaaagatt-tagaatgaaactttttgaattctgacctgaactcgccacggcgagcaaaggctctcgcctcgcgagtgacccagaaacagagtgcc 28125  T
Q  223 ttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaatgatgatgt 302  Q
    |||| ||| |||||| | || ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28124 ttgtcaggattttgcaatctgtgtcgcacaagttgttaagagttgaaccttggggtagtattgagacttaatgatgatgt 28045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 29039 - 28924
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||| | |||||||||||||||||||||||||||||||||||||     
T  29039 cagagagcatgcaagatttcgtgattttgacttttgagtagatccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtaga 28940  T
Q  114 atgagattgaacctgg 129  Q
    ||||||||||||||||    
T  28939 atgagattgaacctgg 28924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 29 - 281
Target Start/End: Complemental strand, 12416 - 12165
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||||||||| |||||| | |||||||||| |||||||||| || ||||| |||| ||||||||||||||||||||||||| |||||||||||||||    
T  12416 atttcgtgattttgacttttgaattgatccttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 12317  T
Q  129 gaaagattgtagaattgaac-ttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-t 226  Q
    ||   |||  |||| ||||| |||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||||  ||||   ||||| || | || |    
T  12316 gattaatt-aagaa-tgaactttttggaaactgacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacaga-agccctgtt 12220  T
Q  227 taggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    |||| |||||||| ||||||  ||||||| |||||||||||||||||||||||||    
T  12219 taggattttgcgatctttgtcacacgagtcgttgagagttgaaccttggggtagt 12165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 12427 - 12611
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| || ||| ||||| |||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  12427 cagagagcatgcaagatttcgtgattttgacttttgagatgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 12526  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgc 199  Q
    |||||||||||||||||||||   ||||||  |||||| | |||||||| |||||| ||||| |||||| |||||||||||||||||    
T  12527 atgagattgaacctggaaaga-catagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgc 12611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 14 - 293
Target Start/End: Complemental strand, 47478 - 47210
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  | || |||||| |||||| ||||| |||||||||| || ||||| ||||||||||||||||||||| |||||||||    
T  47478 cagagagcatgcaagatttcgtattgttgacttttgagttgaaccttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtagg 47379  T
Q  114 atgagattgaacctggaaagattgtagaattgaactt-ttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    |||||||||||||||           ||||| ||||| | ||| |||||||||| | |||||||| | | ||||||||||||||||||||||||||| ||    
T  47378 atgagattgaacctg-----------gaattaaacttgtgggattctgacctgagctcgccacggagcgcagaggctctcgcctcgcgagtgacccaaaa 47290  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
     ||||| | ||||||| |   | ||||||||||||||||||||||| |||||||||||| | |||||| ||| ||||||||    
T  47289 ccagagtgacttgtta-gaaatggcgacctttgttgcacgagttgtcgagagttgaacccttgggtaggattaagacttaa 47210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 530 - 344
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| | |||| ||||| |||| || || ||||||||||||||||||| ||||||||||||||||||||    
T  530 cagagagcatgcaagatttcgtgattttgacttttgaattgaaccttagatgcctt-gagtgcctgaacatgtctaatattgattaggaaagaatgtagg 432  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||| | | |||||| ||||||| | |||||||| |||||| ||||| |||||| ||||||||||||||||||||    
T  431 atgagattgaacctggaaatact-tagaatggaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 79950 - 80137
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||||||||| |||||| |||||| | ||| ||||  |||| ||||||||||||||||||| ||||||||||||||||||||    
T  79950 cagagagcatgcaagatttcgtgattttgacttttgagttgaacattaaatgccattgagtgcctgaacatgtctaatattgattaggaaagaatgtagg 80049  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||||||||| | ||||||  |||||| | |||||||| |||||| || || |||||| ||||||||||||||||||||    
T  80050 atgagattgaacctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgacatggcgagcagaggctctcgcctcgcgag 80137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 7913 - 8099
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    |||||||||||||||||| |||||||| |||||| |||||| ||||| |||| ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  7913 agagagcatgcaagattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtagga 8012  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||||||||||||||| | ||||||  |||||| | |||||| | | |||| ||||| |||||| ||||||||||||||||||||    
T  8013 tgagattgaacctggaaagact-tagaatgaaactttggagaatct-aacagaactcgccatggcgagcagaggctctcgcctcgcgag 8099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 53122 - 53204
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 129  Q
    ||||||||| | ||| ||| |||||| |||||||||| || |||||||||||||| |||  | |||  |||||||||||||||    
T  53122 ttaagttgaactttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgg 53204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 18 - 293
Target Start/End: Complemental strand, 52067 - 51803
Alignment:
Q  18 gagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatga 117  Q
    |||| |||||||||||||  |||| |||||| |||| | ||||  |||| ||||| |||||||||| |||||||||||||||||||||||||||||| ||    
T  52067 gagcttgcaagatttcgtattttttacttttgagttaaacctttgatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacga 51968  T
Q  118 gattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacag 216  Q
    |||||||||||||| ||           |||||  || || || |||||| | |||||||||||| ||||||||||||||||||||||||||||||||||    
T  51967 gattgaacctggaatga-----------aacttacgggattctaacctgagctcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacag 51879  T
Q  217 agagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
    || | ||||||| | ||||||||| ||||||||||||||||| |||| ||| ||| | |||||| ||| ||||||||    
T  51878 agtgacttgtta-gattttgcgacttttgttgcacgagttgtcgagaattggacccttgggtaggattaagacttaa 51803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 108967 - 109055
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggat 115  Q
    |||||||||| ||  | |||||||||||| |||| ||| | ||||| |||||||||||  ||| || |||||||||| |||||||||||    
T  108967 agatttcgtgtttcgaccttttaagttgaaccttgtatacctttgagtgcctgaacatacctagtattgattaggaatgaatgtaggat 109055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 7301 - 7126
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  7301 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 7202  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||||| ||||| |||| |||||  | ||| |||||||| ||||| ||||||||||||||||||||| |||||    
T  7201 tggaaagattttagaa-tgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgccttgcgag 7126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 203
Target Start/End: Complemental strand, 8486 - 8330
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattga 146  Q
    ||||||||| ||||| ||| |||||  || ||||| |||| ||||||||||||| ||||| | |||  |||||||||||||||||   ||  ||||| ||    
T  8486 ttaagttgaaccttaaatgtttttgggtgtctgaatatgtgtaataatgattagaaaagattctagattgagattgaacctggaatagtttaagaatgga 8387  T
Q  147 acttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
      ||| ||| |   |||||||| ||||| ||||||| ||||| ||||||||||||||    
T  8386 tttttgggagttacacctgaactcgccatggcgagtggaggccctcgcctcgcgagt 8330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 2064 - 2250
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    |||||||||||||||||| || ||||| ||| || |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  2064 agagagcatgcaagattttgtaattttgactgttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 2163  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||||||||| ||||| | ||||||  || ||| | |||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  2164 tgagattgaacctgaaaagact-tagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 2250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 133143 - 132967
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  133143 agatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 133044  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    |||||||| | ||||| |||| |||||  | ||| |||||||| ||||| |||||| |||||||||||||||||||||    
T  133043 tggaaagactttagaa-tgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 132967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 42014 - 41901
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    ||||||||||||  ||||||  |||||| ||||||| |||||  ||||   ||  ||||| |||||||||||  ||| || |||||||||| ||||||||    
T  42014 gcagagagcatgttagattttctgatttcaactttttagttggaccttgagtgtctttgagtgcctgaacatacctagtattgattaggaatgaatgtag 41915  T
Q  113 gatgagattgaacc 126  Q
    ||| | ||||||||    
T  41914 gatcatattgaacc 41901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 126
Target Start/End: Complemental strand, 57520 - 57408
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||  ||||||  |||||| ||||||| |||||  ||||   ||  ||||| |||||||||||  ||| || |||||||||| ||||||||     
T  57520 cagagagcatgttagattttctgatttcaactttttagttggaccttgagtgtctttgagtgcctgaacatacctagtattgattaggaatgaatgtaga 57421  T
Q  114 atgagattgaacc 126  Q
    || ||||||||||    
T  57420 atcagattgaacc 57408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 10412 - 10226
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    |||||||||| ||||||| |||||||| |||||| |||||| ||||| |||| ||||| ||||| |||||||||| || |||||||||||||||||||||    
T  10412 agagagcatgtaagattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtagga 10313  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||||||||||||||||| | |||||   |||||| | |||||||| |||||| ||||| |||||| ||||||||||||||||||||    
T  10312 tgagattgaacctggaaagact-tagaaggaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 10226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 13226 - 13340
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||||||||||||||||| ||||| |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13226 cagagagcatgcaagatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagg 13325  T
Q  114 atgagattgaacctg 128  Q
    |||||||||| ||||    
T  13326 atgagattgagcctg 13340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 293
Target Start/End: Complemental strand, 1778 - 1510
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||||| |||| | ||| |||||||||  ||||||||||||||||||| |||||||  || |  |||||    
T  1778 cagagagcatgcaagatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtagg 1679  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    | | ||||||||||||||           || ||||| |||||| || | |||||| ||| |||||||| ||||||||||||||||||||||||| ||||    
T  1678 acgtgattgaacctggaa-----------ttaaacttatggaattctaaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaa 1590  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
    |||||| | |||||| ||  |||||||||||||||||||||||||| |||||||| ||| | |||||| ||| ||||||||    
T  1589 acagagtgacttgtt-ggagtttgcgacctttgttgcacgagttgtcgagagttggacccttgggtaggattaagacttaa 1510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 14 - 293
Target Start/End: Complemental strand, 7755 - 7487
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||||| |||| | ||| |||||||||  ||||||||||||||||||| |||||||  || |  |||||    
T  7755 cagagagcatgcaagatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattagtgaatagggtagg 7656  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaat-ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaa 212  Q
    | | ||||||||||||||           || ||||| |||||| || | |||||| ||| |||||||| ||||||||||||||||||||||||| ||||    
T  7655 acgtgattgaacctggaa-----------ttaaacttatggaattctaaactgaactcgcgacggcgagcagaggctctcgcctcgcgagtgacctagaa 7567  T
Q  213 acagagagtcttgttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagtattgagacttaa 293  Q
    |||||| | |||||| ||  |||||||||||||||||||||||||| |||||||| ||| | |||||| ||| ||||||||    
T  7566 acagagtgacttgtt-ggagtttgcgacctttgttgcacgagttgtcgagagttggacccttgggtaggattaagacttaa 7487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 9579 - 9391
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||  ||| |||| |||||| || ||| ||||| |||||||||| |||||||||| ||||||||| ||||||||||||||||||     
T  9579 cagagagcatgcaagattctgtgtttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtaga 9480  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
     |||||||| ||||||||||| | ||||| |||| |||||  | ||| |||||||| ||||| |||||||||||||||||||||||||||    
T  9479 gtgagattggacctggaaagagtttagaa-tgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgag 9391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 202
Target Start/End: Complemental strand, 16161 - 15974
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||| || ||||| |||||  |||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||     
T  16161 cagagagcatgcaagattttgtaattttgactttagagttgatccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaga 16062  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||| ||||| |  | |||  || ||| | |||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  16061 atgagattgaacctgaaaagact-caaaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgag 15974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 1845 - 1755
Alignment:
Q  9 aggagcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgatta 99  Q
    |||| ||||||||||| |||||||||| ||||| |||||| |||||| ||||| ||| |||||| |||||||| |||| || ||| |||||    
T  1845 aggaccagagagcatgtaagatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtttattaaagatta 1755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 9452 - 9639
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||| ||||||||||||||| ||||||  |||||| |||||| ||||| |||| ||||| ||||||||||||||||||| |||||| |||||||||||||    
T  9452 cagatagcatgcaagatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtagg 9551  T
Q  114 atgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||| ||||||||| | ||||||  |||||| | |||||||| |||||| || || |||||| ||||||||||||||||||||    
T  9552 atgagattgaatctggaaagact-tagaatgaaactttggagaatctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgag 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 28899 - 29081
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagga 114  Q
    |||||||||||||||||| || ||||| ||||||  ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  28899 agagagcatgcaagattttgtaattttgacttttgggttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaa 28998  T
Q  115 tgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcg 198  Q
    ||||||||||||| |||||| | ||||||  || ||| | |||||||||| ||||  |||| |||||| ||||||||||||||||    
T  28999 tgagattgaacctagaaagact-tagaatgaaaatttagagaatctgacc-gaactagccatggcgagcagaggctctcgcctcg 29081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 202
Target Start/End: Original strand, 24268 - 24456
Alignment:
Q  14 cagagagcatgcaagatttcgtgatttta-acttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    ||||||||||||||||||||||||||||  |||||| |||| | ||||| ||||  |||| ||||||||||||||||||| ||||||||||||||| |||    
T  24268 cagagagcatgcaagatttcgtgatttttgacttttgagtttaaccttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttag 24367  T
Q  113 gatgagattgaacctggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||||||||||| |||||| | ||||||  |||||| |  ||||||| |||||| ||||| |||||| ||||||||||||||||||||    
T  24368 gatgagattgaacctagaaagact-tagaatgaaactttggataatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgag 24456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 32573 - 32397
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||| || ||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  32573 agattttgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 32474  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    |||||||| | ||||| |||| |||||  | ||| |||||||| ||||| |||||| |||||||||| ||||||||||    
T  32473 tggaaagactttagaa-tgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcacctcgcgagt 32397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 10647 - 10540
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    |||||||| ||||||||||||||||||| || ||| |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  10647 cagagagcttgcaagatttcgtgattttgacctttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagg 10548  T
Q  114 atgagatt 121  Q
    ||||||||    
T  10547 atgagatt 10540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 28440 - 28616
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||  |||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  28440 agatttcgtacttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 28539  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    |   |||| | ||||| |||| |||||  | ||| |||||||| ||||| |||||| |||||||||||||||||||||    
T  28540 tacgaagactttagaa-tgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 210
Target Start/End: Complemental strand, 620 - 437
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| | |||||||||| |   |||||| ||||| ||||||||||||||||||||||||||| || || ||||||||||||     
T  620 agatttcgtaattttgacttttgaattgatccttagacttttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaact 521  T
Q  127 tggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccag 210  Q
    |||||||||| ||||| |||| ||||| || |   |||||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  520 tggaaagattttagaa-tgaatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccag 437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 101884 - 101709
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| | | |||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||    
T  101884 agatttcgtaatttttacttttgagttgatccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacc 101785  T
Q  127 tggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    |||| ||| | ||||| |||| |||  |||  |||||||||| ||||| |||||| ||||||||| |||||| ||||    
T  101784 tggagagactttagaa-tgaattttgtgaacttgacctgaactcgccatggcgagcagaggctcttgcctcgggagt 101709  T

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Target: scaffold0001 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 29 - 202
Target Start/End: Complemental strand, 161173 - 161000
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||| ||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| || || |||||||||||||||    
T  161173 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 161074  T
Q  129 gaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    || ||| | ||||| |||| |||||  | ||| |||||||  ||||| ||||||||||||||||| |||| ||||    
T  161073 gagagactttagaa-tgaatttttgtgaactgaacctgaagtcgccatggcgagtagaggctctcacctcacgag 161000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 2434 - 2609
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||| | ||||| ||||||  | ||||||||| |||||||||| | ||||||||||||||||||||||||||||||| || || ||||| |||||||    
T  2434 agatttcataattttgacttttgggatgatccttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaacc 2533  T
Q  127 tggaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    || ||||||| ||||| |||| |||  ||| ||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  2534 tgtaaagattttagaa-tgaaatttgtgaa-ctgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 45420 - 45596
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||| || ||||| |||||| |||||||||||| ||| |||||| |||||||| |||||||||||||||||||||||| ||  | |||||||||||||    
T  45420 agattttgtaatttttacttttgagttgatccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaacc 45519  T
Q  127 tggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||| |||| | ||||||  |  ||||| ||||   |||||||| ||||| |||||||||||||||||||||||||||    
T  45520 tggtaagactttagaatgaattttttgtgaattgtacctgaactcgccatggcgagtagaggctctcgcctcgcgag 45596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 210
Target Start/End: Complemental strand, 19756 - 19573
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||| || ||||| |||| | |||||||||||| ||| |||||| |||||||||||||||||||||||||||||| || || || |||||||||||||    
T  19756 agattttgtaattttgacttctgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacc 19657  T
Q  127 tggaaagattgtagaattgaactttt-ggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccag 210  Q
    |||||||||| ||||| |||| ||||  |  |   |||||||| ||||| |||||| ||||||||||||||||||| ||||||||    
T  19656 tggaaagattttagaa-tgaatttttatgtgttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccag 19573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 6449 - 6557
Alignment:
Q  17 agagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatg 116  Q
    |||| |||||||||||| ||||||| |||||| || ||||||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||| |||    
T  6449 agagaatgcaagatttcatgattttgacttttgagatgatccttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatg 6548  T
Q  117 agattgaac 125  Q
    |||||||||    
T  6549 agattgaac 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 6561 - 6617
Alignment:
Q  162 cctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagag 218  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  6561 cctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaatagag 6617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 3420 - 3318
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||| ||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| || ||  ||||||||||||||    
T  3420 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 3321  T
Q  129 gaa 131  Q
    |||    
T  3320 gaa 3318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 15462 - 15636
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||||||||||||||||| ||||| ||| |||||| ||||| ||||||| |||| |||||||||||||| | |||  |||||||||||||    
T  15462 gatttcgtaattttaacttttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacct 15561  T
Q  128 ggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||   ||  ||||| ||  ||| |||||   || ||||| ||||| ||||||||||||| |||||||||||||    
T  15562 ggaatagtttaagaatggatttttcggaattacacatgaactcgccatggcgagtagaggccctcgcctcgcgag 15636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 29 - 130
Target Start/End: Original strand, 2277 - 2378
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    ||||||| ||||| |||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| || ||  ||||||||||||||    
T  2277 atttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 2376  T
Q  129 ga 130  Q
    ||    
T  2377 ga 2378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 203
Target Start/End: Original strand, 1934 - 2108
Alignment:
Q  29 atttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 128  Q
    |||||||  |||| |||||| |||||||||||| ||| |||||| |  |||||||||||||||||||||||||||||| || || |||||||||||| |     
T  1934 atttcgtatttttgacttttgagttgatccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacata 2033  T
Q  129 gaaagattgtagaattgaacttttggaatctg-acctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
     ||||| | ||||| |||| |||||  | ||| |||||||| ||||| ||| || |||||||||||||||||||||    
T  2034 aaaagactttagaa-tgaaattttgtgaactgaacctgaactcgccatggcaagcagaggctctcgcctcgcgagt 2108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 6083 - 5979
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||| ||| |||||| |||||||||| |||||||||||||||||||||| || ||  |||||||||||     
T  6083 agatttcgtaattttgactttttagttgatccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaact 5984  T
Q  127 tggaa 131  Q
    |||||    
T  5983 tggaa 5979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 130397 - 130222
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||  ||| |||||| |||||||||||||||| | |||||||| ||||| | |||  ||||||||||||    
T  130397 agatttcgtaattttgacttttgagttgatcctttgatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacc 130298  T
Q  127 tggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    |||||   ||  ||||| ||  ||| |||||   |||| ||| ||||| |||||| ||||||||||||||||||||    
T  130297 tggaatagtttaagaatggatttttgggaattacacctaaactcgccatggcgagcagaggctctcgcctcgcgag 130222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 60479 - 60598
Alignment:
Q  162 cctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg-ttaggtttttgcgacctttgttgcacgagttgttg 260  Q
    ||||||| |||||  |||||||||||||||||||||||||||  |||||  |||||     ||| ||||| ||||| || |||||| ||||||| ||||     
T  60479 cctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatacattgtttagggttttgtgatctttgtcgcacgagatgtta 60578  T
Q  261 agagttgaaccttggggtag 280  Q
     |||||||||||||||||||    
T  60579 tgagttgaaccttggggtag 60598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 242534 - 242420
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  242534 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 242435  T
Q  113 gatgagattgaacct 127  Q
    |   |||||||||||    
T  242434 ggcaagattgaacct 242420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 1082 - 962
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtagg 113  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||  ||||| |||  |||||||||||||| |||||||||  ||||||| |    
T  1082 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgtctttgagtgctagaacatgtctaatattgattaggagtgaatgtaag 983  T
Q  114 atgagattgaacctggaaaga 134  Q
    ||||||| | |||||||||||    
T  982 atgagataggacctggaaaga 962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 106
Target Start/End: Original strand, 10200 - 10278
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaaga 106  Q
    |||||||| ||||| || ||| || ||| ||||| ||| |||||| ||||||||||||||||||||||||||| |||||    
T  10200 gatttcgtaattttgacctttgagatgaaccttagatgtttttgagtgcctgaacatgtctaataatgattagtaaaga 10278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 10305 - 10347
Alignment:
Q  161 acctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    |||||||| |||||  |||||||||||||||||||||||||||    
T  10305 acctgaactcgccaaagcgagtagaggctctcgcctcgcgagt 10347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 10890 - 10970
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataat 94  Q
    ||||||||||||||||||||||  |||| |||||| |||||| ||||| |||||||||| |||||||||||||||||||||    
T  10890 cagagagcatgcaagatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataat 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 52; Significance: 8e-21; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 7102 - 6931
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| || |||||||||| ||||| ||| |||||| ||||| ||||||| |||| |||||||||||||| | |||  | |||||||||||    
T  7102 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacct 7003  T
Q  128 ggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgc 199  Q
    ||||   ||  ||||| ||  ||| |||||   |||||||| ||||| ||||||||||||| ||||||||||    
T  7002 ggaatagtttaagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgc 6931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 14482 - 14311
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| || |||||||||| ||||| ||| |||||| ||||| ||||||| |||| |||||||||||||| | |||  | |||||||||||    
T  14482 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacct 14383  T
Q  128 ggaaagattgtagaattgaacttttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgc 199  Q
    ||||   ||  ||||| ||  ||| |||||   |||||||| ||||| ||||||||||||| ||||||||||    
T  14382 ggaatagtttaagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgc 14311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 52; Significance: 8e-21; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 13429 - 13255
Alignment:
Q  28 gatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||| ||||| || ||| |||||| ||||| ||| |||||| |||||||||||||||||| |||||||||||||| || ||  | |||||||||||    
T  13429 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacct 13330  T
Q  128 ggaaagattgtagaattgaacttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||   ||  |||| |||| ||||| || |   |||||||| ||||| ||||||||||||| |||||||||||||    
T  13329 ggaatagtttaagaa-tgaatttttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgag 13255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 29836 - 29950
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| || ||||| |||||| |||||  ||||   |||  |||| |||||||||||  ||| ||||||||||||| ||||||||    
T  29836 gcagagagcatgtaagattttgtaattttgactttttagttggaccttgagtgccattgagtgcctgaacatacctagtaatgattaggaatgaatgtag 29935  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  29936 gacaagattgaacct 29950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 41832 - 41946
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| || ||||| |||||| |||||  ||||   |||  |||| |||||||||||  ||| ||||||||||||| ||||||||    
T  41832 gcagagagcatgtaagattttgtaattttgactttttagttggaccttgagtgccattgagtgcctgaacatacctagtaatgattaggaatgaatgtag 41931  T
Q  113 gatgagattgaacct 127  Q
    ||  |||||||||||    
T  41932 gacaagattgaacct 41946  T

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Target: scaffold0621 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 7026 - 6923
Alignment:
Q  27 agatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||| ||||| |||||| |||||||||||  ||| |||||| |||||| |||||||||||||| ||||||||||| || ||  ||||||||||||    
T  7026 agatttcgtaattttgacttttgagttgatcctttgatg-ttttgagtgcctggacatgtctaataataattaggaaagattggagattgagattgaacc 6928  T
Q  127 tggaa 131  Q
    |||||    
T  6927 tggaa 6923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2044 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold2044
Description:

Target: scaffold2044; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 1075 - 1132
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttga 72  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||    
T  1075 agagagcatgcaagatttcgtgattttgacttttgagttgatccttagatgcttttga 1132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 47 - 203
Target Start/End: Complemental strand, 10998 - 10842
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattga 146  Q
    |||||||||  |||| ||| |||||| ||||||||||||| |||||||||||||||||||   |||  |||||||||||||||||   ||  |||| |||    
T  10998 ttaagttgaatcttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaatagtttaagaa-tga 10900  T
Q  147 acttttg-gaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    | ||||| || |   |||||||| |||||  |||||||||||||||||||||||||||    
T  10899 atttttgtgagttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 202
Target Start/End: Original strand, 43438 - 43590
Alignment:
Q  50 agttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattgaact 149  Q
    |||||| ||||| ||| |||||| |||||||||||||||||| |||||||| ||||| | |||  |||||||||||||||||   ||  ||||| ||  |    
T  43438 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggattt 43537  T
Q  150 tttggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    || ||| |   ||||| || ||||| | |||||||||||||||||||||||||    
T  43538 ttgggagttacacctgtactcgccatgacgagtagaggctctcgcctcgcgag 43590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 131
Target Start/End: Original strand, 47358 - 47439
Alignment:
Q  50 agttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 131  Q
    |||||| ||||| ||| |||||| |||||||||||||||||| |||||||| ||||| | |||  |||||||||||||||||    
T  47358 agttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaa 47439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 225698 - 225643
Alignment:
Q  226 ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagt 281  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  225698 ttaggattttgcgatctttgtcgcacgagttgttgagagttgaaccttggggtagt 225643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 227942 - 227878
Alignment:
Q  67 ttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 131  Q
    |||||| ||||| ||||||| ||||||||||||||||||| | |||  |||||||||||||||||    
T  227942 ttttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctggaa 227878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 678 - 755
Alignment:
Q  46 tttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattga 123  Q
    ||||||||||  |||| ||| |||||| ||||||||||||| ||||||||||||||||||| |||||  |||||||||    
T  678 tttaagttgaatcttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattga 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 12465 - 12381
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 131  Q
    ||||||||||  ||| ||| |||||| || |||||||||| ||||||||||||||||||| | |||  |||||||||||||||||    
T  12465 ttaagttgatatttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctggaa 12381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 203
Target Start/End: Original strand, 7708 - 7864
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagattgtagaattga 146  Q
    ||||||||| ||||| ||| |||||| || |||||||||| |||||||||||||||||||   |||  ||||||||||||| |||   ||  |||| |||    
T  7708 ttaagttgaaccttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaatagtttaagaa-tga 7806  T
Q  147 actttt-ggaatctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagt 203  Q
    | |||| ||  |   |||||||| |||||  |||||||||||||||||||||||||||    
T  7807 atttttgggggttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagt 7864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 15049 - 15106
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttga 72  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||||| |||| |||||    
T  15049 agagagcatgcaagatttcgtgattttcacttttgagttgaaccttagatgcctttga 15106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 5772 - 5852
Alignment:
Q  46 tttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||||||||  |||| ||| |||||| | ||||||||||| ||||||||||||||||| | |||||  ||||||||||||    
T  5772 tttaagttgaatcttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaacc 5852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 2344 - 2245
Alignment:
Q  26 aagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 125  Q
    |||||||||  ||| |||||||| ||| || ||||| ||| |||||| |||||||| |||   | |||||||||||||||| ||||| ||||||||||||    
T  2344 aagatttcggaattataactttttagtggaaccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 282
Target Start/End: Original strand, 15866 - 15985
Alignment:
Q  164 tgaacacgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgtt-aggtttttgcgacctttgttgcacgagttgttgag 262  Q
    ||||| |||||  ||||||| |||| ||||||||||||||  |||||  |||||  | |||||| ||| |||||||| |||||| |||| |||||||  |    
T  15866 tgaactcgccatagcgagtataggccctcgcctcgcgagttgcccagttacagaatgccttgtttaggattttgcgatctttgtcgcacaagttgttatg 15965  T
Q  263 agttgaaccttggggtagta 282  Q
    ||||||||||| ||||||||    
T  15966 agttgaacctttgggtagta 15985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 282
Target Start/End: Complemental strand, 13421 - 13365
Alignment:
Q  226 ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtagta 282  Q
    ||||| |||||||| |||||| ||||||||||||  ||||| |||||||||||||||    
T  13421 ttaggattttgcgatctttgtcgcacgagttgttatgagttaaaccttggggtagta 13365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 14980 - 14914
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctga 80  Q
    ||||||||||||||||||| || ||||| |||||  |||||||||||| ||||||| || |||||||    
T  14980 cagagagcatgcaagattttgtaattttgactttagagttgatccttagatgctttggagtgcctga 14914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 3505 - 3618
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    ||||||||||||  |||||| || ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||| | ||||||||    
T  3505 gcagagagcatgttagattttgtaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattagggatgaatgtag 3604  T
Q  113 gatgagattgaacc 126  Q
    ||| ||||||||||    
T  3605 gatcagattgaacc 3618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 72
Target Start/End: Original strand, 17343 - 17400
Alignment:
Q  15 agagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttga 72  Q
    |||||||||||||||||| || ||||| |||||| |||||| ||||| ||||||||||    
T  17343 agagagcatgcaagattttgtaattttgacttttgagttgaaccttagatgcttttga 17400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 14169 - 14282
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| |  ||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||||| ||||||||    
T  14169 gcagagagcatgtaagattttgcaatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattaggaatgaatgtag 14268  T
Q  113 gatgagattgaacc 126  Q
    ||  ||||||||||    
T  14269 gacaagattgaacc 14282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 8506 - 8619
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    ||||||||||||  |||||| || ||||  |||||| |||||  |||||  ||| ||||| ||| |||||||  ||| ||||||||||| | ||||||||    
T  8506 gcagagagcatgttagattttgtaatttcgactttttagttggaccttaagtgcctttgagtgcgtgaacatacctagtaatgattagggatgaatgtag 8605  T
Q  113 gatgagattgaacc 126  Q
    ||| ||||||||||    
T  8606 gataagattgaacc 8619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 58102 - 58161
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    ||||| |||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  58102 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 58161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 70296 - 70211
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgatta 99  Q
    |||||||||||||||||||  |  |||| |||||| |||||| ||||| ||| |||||| |||||||| |||| || ||| |||||    
T  70296 cagagagcatgcaagattttatagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 70211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 586 - 640
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattagg 101  Q
    ||||||||||||||| ||| |||||| ||| |||| |||| ||||||||||||||    
T  586 ttaagttgatccttaaatgattttgagtgcatgaatatgtataataatgattagg 640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 10599 - 10541
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||| |||||||||||  ||| ||||||||||||| ||||||||||  ||||||||||    
T  10599 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 10541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 280
Target Start/End: Complemental strand, 25385 - 25343
Alignment:
Q  238 gacctttgttgcacgagttgttgagagttgaaccttggggtag 280  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||    
T  25385 gacctttgtcgcacgagttgttgtgagttgatccttggggtag 25343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 27064 - 27006
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||| |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  27064 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 27006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 35521 - 35575
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattagg 101  Q
    ||||||||| ||||| ||| |||||| |||||||| |||| ||||||||||||||    
T  35521 ttaagttgaaccttaaatgattttgagtgcctgaatatgtataataatgattagg 35575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 280
Target Start/End: Original strand, 24427 - 24481
Alignment:
Q  226 ttaggtttttgcgacctttgttgcacgagttgttgagagttgaaccttggggtag 280  Q
    |||||||||||||| |||||| ||||||| ||||  ||||||| |||||||||||    
T  24427 ttaggtttttgcgatctttgtcgcacgagatgttatgagttgatccttggggtag 24481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 24171 - 24255
Alignment:
Q  47 ttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaa 131  Q
    |||||||||  |||| ||| |||||| |||||||| || | |||||||||||||| |||  | |||  |||||||||||||||||    
T  24171 ttaagttgaagcttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctggaa 24255  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 125797 - 125855
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||| |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  125797 tttgagtgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 125855  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 80788 - 80726
Alignment:
Q  67 ttttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgg 129  Q
    |||||| ||||||||||||| |||||||||||||| |||  | |||  |||||||||||||||    
T  80788 ttttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgg 80726  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 128735 - 128775
Alignment:
Q  162 cctgaacacgccacggcgagtagaggctctcgcctcgcgag 202  Q
    ||||||| |||||  ||||||||||||||||||||||||||    
T  128735 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 128775  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 126
Target Start/End: Complemental strand, 9762 - 9704
Alignment:
Q  68 tttgaatgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    ||||| |||||||||||  ||| ||||||||||||| ||||||||||  ||||||||||    
T  9762 tttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacc 9704  T

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Target: scaffold0370 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 17422 - 17475
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacct 127  Q
    |||||||||||  ||| ||||||||||||| ||||||||||  |||||||||||    
T  17422 tgcctgaacatacctagtaatgattaggaatgaatgtaggacaagattgaacct 17475  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 20483 - 20418
Alignment:
Q  14 cagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctg 79  Q
    ||||||||||||||||||| ||  |||| |||||| |||||| ||||| ||| |||||| ||||||    
T  20483 cagagagcatgcaagattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctg 20418  T

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Target: scaffold0051 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 126
Target Start/End: Complemental strand, 37184 - 37071
Alignment:
Q  13 gcagagagcatgcaagatttcgtgattttaacttttaagttgatccttatatgcttttgaatgcctgaacatgtctaataatgattaggaaagaatgtag 112  Q
    |||||||||||| ||||||| | |||||  |||||| |||||  ||||   ||| ||||| |||||||||||  ||| ||||||||||| | ||||||||    
T  37184 gcagagagcatgtaagattttgcgatttcgactttttagttggaccttgagtgcctttgagtgcctgaacatacctagtaatgattagggatgaatgtag 37085  T
Q  113 gatgagattgaacc 126  Q
    |   ||||||||||    
T  37084 ggcaagattgaacc 37071  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 307512 - 307460
Alignment:
Q  74 tgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 126  Q
    |||||||||||  ||| || |||||||||| ||||||||||| ||||||||||    
T  307512 tgcctgaacatacctagtattgattaggaatgaatgtaggatcagattgaacc 307460  T

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