View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3682_low_6 (Length: 253)

Name: NF3682_low_6
Description: NF3682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3682_low_6
NF3682_low_6
[»] chr7 (79 HSPs)
chr7 (153-253)||(12318132-12318232)
chr7 (156-253)||(15580696-15580793)
chr7 (152-253)||(13635469-13635570)
chr7 (152-248)||(11312658-11312754)
chr7 (14-96)||(11312810-11312892)
chr7 (154-253)||(16583261-16583360)
chr7 (14-96)||(15605134-15605216)
chr7 (17-96)||(12318289-12318368)
chr7 (152-253)||(15605272-15605374)
chr7 (155-237)||(70768-70850)
chr7 (155-237)||(74877-74959)
chr7 (155-237)||(26292416-26292498)
chr7 (155-237)||(39722287-39722369)
chr7 (26-96)||(16583417-16583487)
chr7 (155-237)||(12714885-12714967)
chr7 (155-237)||(12718689-12718771)
chr7 (26-96)||(13635343-13635413)
chr7 (155-237)||(16114262-16114344)
chr7 (155-237)||(16117415-16117497)
chr7 (155-237)||(16907204-16907286)
chr7 (155-237)||(18283387-18283469)
chr7 (17-90)||(9593513-9593586)
chr7 (17-90)||(9644476-9644549)
chr7 (152-243)||(9593361-9593450)
chr7 (155-237)||(33128-33210)
chr7 (155-237)||(12704662-12704744)
chr7 (155-237)||(18279424-18279506)
chr7 (17-96)||(18923-19002)
chr7 (160-245)||(11987225-11987308)
chr7 (155-237)||(12723600-12723682)
chr7 (152-253)||(13918781-13918879)
chr7 (14-96)||(15580853-15580935)
chr7 (159-243)||(19066-19148)
chr7 (152-253)||(1859087-1859185)
chr7 (185-251)||(2832482-2832548)
chr7 (17-78)||(16724496-16724557)
chr7 (17-78)||(17701510-17701571)
chr7 (17-70)||(48593321-48593374)
chr7 (152-243)||(7519359-7519447)
chr7 (152-253)||(2530391-2530491)
chr7 (183-238)||(3271846-3271901)
chr7 (184-239)||(9751794-9751849)
chr7 (17-88)||(13461931-13462002)
chr7 (17-96)||(16438899-16438978)
chr7 (152-242)||(16457358-16457446)
chr7 (23-96)||(11987373-11987447)
chr7 (187-253)||(25927536-25927602)
chr7 (183-239)||(12321780-12321836)
chr7 (17-88)||(13149324-13149395)
chr7 (184-239)||(14429905-14429960)
chr7 (17-80)||(15728502-15728565)
chr7 (25-88)||(42205284-42205347)
chr7 (187-253)||(16275497-16275563)
chr7 (185-251)||(19649530-19649596)
chr7 (15-96)||(33269-33350)
chr7 (15-96)||(70628-70709)
chr7 (15-96)||(74737-74818)
chr7 (188-253)||(35151611-35151676)
chr7 (195-239)||(39267950-39267994)
chr7 (185-252)||(2760140-2760207)
chr7 (17-87)||(6801383-6801452)
chr7 (152-253)||(13149160-13149259)
chr7 (14-80)||(14430071-14430137)
chr7 (188-253)||(8917432-8917497)
chr7 (23-80)||(8917604-8917661)
chr7 (188-253)||(14216920-14216985)
chr7 (188-253)||(15728330-15728395)
chr7 (188-253)||(16724665-16724730)
chr7 (188-253)||(17701679-17701744)
chr7 (202-251)||(24054474-24054523)
chr7 (166-253)||(18425443-18425528)
chr7 (31-79)||(18557151-18557199)
chr7 (49-96)||(2530040-2530087)
chr7 (17-80)||(14217092-14217155)
chr7 (191-238)||(42204017-42204064)
chr7 (185-239)||(9446199-9446253)
chr7 (188-253)||(13461766-13461831)
chr7 (207-248)||(14152048-14152089)
chr7 (188-253)||(18556978-18557043)
[»] chr1 (42 HSPs)
chr1 (152-251)||(24783100-24783199)
chr1 (152-253)||(36819308-36819410)
chr1 (155-237)||(1010744-1010826)
chr1 (14-96)||(16080306-16080388)
chr1 (152-253)||(16080444-16080545)
chr1 (14-96)||(36819170-36819252)
chr1 (155-237)||(20228812-20228894)
chr1 (155-237)||(16375461-16375543)
chr1 (155-237)||(21407376-21407458)
chr1 (24-96)||(33797695-33797767)
chr1 (17-96)||(19212029-19212108)
chr1 (155-237)||(52639562-52639644)
chr1 (17-88)||(20138253-20138324)
chr1 (152-253)||(33797288-33797386)
chr1 (152-243)||(19211883-19211972)
chr1 (17-96)||(23819164-23819243)
chr1 (14-88)||(18393825-18393899)
chr1 (183-239)||(18182159-18182215)
chr1 (14-88)||(45310228-45310302)
chr1 (15-96)||(1010885-1010966)
chr1 (185-238)||(17678626-17678679)
chr1 (191-239)||(3472969-3473017)
chr1 (152-243)||(20138099-20138188)
chr1 (17-88)||(18882537-18882608)
chr1 (14-96)||(24782962-24783044)
chr1 (201-248)||(21313138-21313185)
chr1 (185-239)||(3705105-3705159)
chr1 (152-237)||(23819300-23819383)
chr1 (178-239)||(22449299-22449360)
chr1 (191-238)||(18394012-18394059)
chr1 (190-253)||(20229267-20229330)
chr1 (183-238)||(21788081-21788136)
chr1 (186-237)||(33050067-33050118)
chr1 (191-238)||(45310415-45310462)
chr1 (31-78)||(45489621-45489668)
chr1 (17-79)||(12647049-12647110)
chr1 (152-233)||(18882393-18882472)
chr1 (14-88)||(21022822-21022896)
chr1 (184-238)||(21714569-21714623)
chr1 (17-87)||(46975638-46975708)
chr1 (202-251)||(20091534-20091583)
chr1 (159-242)||(12646888-12646969)
[»] chr3 (87 HSPs)
chr3 (152-253)||(15482668-15482769)
chr3 (152-248)||(2897823-2897919)
chr3 (14-96)||(20461362-20461444)
chr3 (16-96)||(7793213-7793293)
chr3 (152-248)||(20461500-20461596)
chr3 (152-248)||(7793349-7793446)
chr3 (14-96)||(327026-327108)
chr3 (155-237)||(30065970-30066052)
chr3 (155-237)||(11070092-11070174)
chr3 (155-237)||(11165532-11165614)
chr3 (14-96)||(15482825-15482906)
chr3 (159-237)||(15617398-15617476)
chr3 (152-248)||(327164-327261)
chr3 (152-253)||(31097555-31097656)
chr3 (155-237)||(55022891-55022973)
chr3 (17-96)||(31097419-31097499)
chr3 (155-237)||(7109722-7109804)
chr3 (155-237)||(7113657-7113739)
chr3 (155-237)||(14499349-14499431)
chr3 (155-237)||(22336743-22336825)
chr3 (155-237)||(27409647-27409729)
chr3 (155-237)||(28949748-28949830)
chr3 (152-237)||(11854757-11854842)
chr3 (155-237)||(22321688-22321770)
chr3 (184-251)||(14668567-14668634)
chr3 (152-253)||(8489473-8489571)
chr3 (152-253)||(15464871-15464969)
chr3 (25-95)||(15849958-15850028)
chr3 (183-252)||(19725949-19726018)
chr3 (25-96)||(2897696-2897767)
chr3 (184-251)||(14665411-14665478)
chr3 (163-253)||(15850095-15850183)
chr3 (152-253)||(5223070-5223168)
chr3 (185-251)||(12172806-12172872)
chr3 (27-88)||(3402830-3402891)
chr3 (14-91)||(26190870-26190947)
chr3 (25-88)||(3389808-3389871)
chr3 (25-96)||(11854898-11854969)
chr3 (153-246)||(11854430-11854520)
chr3 (14-96)||(16797916-16797998)
chr3 (14-96)||(16808743-16808825)
chr3 (185-239)||(18383956-18384010)
chr3 (15-96)||(30066111-30066192)
chr3 (191-238)||(3403003-3403050)
chr3 (25-96)||(11300384-11300455)
chr3 (192-239)||(11862815-11862862)
chr3 (183-238)||(12496280-12496335)
chr3 (17-88)||(38814554-38814625)
chr3 (185-239)||(1982851-1982905)
chr3 (187-253)||(4589228-4589294)
chr3 (152-253)||(12339472-12339570)
chr3 (185-251)||(15878092-15878158)
chr3 (17-79)||(17242151-17242213)
chr3 (187-253)||(19775353-19775419)
chr3 (185-251)||(23053128-23053194)
chr3 (15-96)||(11070233-11070314)
chr3 (15-96)||(55023032-55023113)
chr3 (191-239)||(322614-322662)
chr3 (191-238)||(3389983-3390030)
chr3 (17-88)||(3833844-3833915)
chr3 (15-66)||(11165392-11165443)
chr3 (14-88)||(322772-322846)
chr3 (152-242)||(11300767-11300854)
chr3 (185-251)||(12037993-12038058)
chr3 (187-253)||(16696791-16696857)
chr3 (152-253)||(16798055-16798154)
chr3 (14-88)||(18383778-18383852)
chr3 (185-251)||(23077518-23077584)
chr3 (185-238)||(11298568-11298621)
chr3 (185-238)||(12511084-12511137)
chr3 (185-238)||(15051531-15051584)
chr3 (185-238)||(15060307-15060360)
chr3 (185-238)||(16909765-16909818)
chr3 (185-238)||(46822292-46822345)
chr3 (185-237)||(11557425-11557477)
chr3 (27-95)||(14499491-14499559)
chr3 (166-253)||(16750604-16750689)
chr3 (159-242)||(17241990-17242071)
chr3 (183-251)||(23408438-23408506)
chr3 (31-78)||(11595017-11595064)
chr3 (191-238)||(11595186-11595233)
chr3 (185-239)||(11851603-11851657)
chr3 (14-80)||(12496446-12496512)
chr3 (14-67)||(11298390-11298443)
chr3 (185-238)||(16369423-16369476)
chr3 (202-238)||(14878574-14878610)
chr3 (159-234)||(15941912-15941985)
[»] scaffold0036 (2 HSPs)
scaffold0036 (152-248)||(66415-66511)
scaffold0036 (14-96)||(66277-66359)
[»] scaffold0031 (3 HSPs)
scaffold0031 (152-248)||(53575-53671)
scaffold0031 (14-96)||(53727-53809)
scaffold0031 (184-237)||(65838-65891)
[»] chr6 (70 HSPs)
chr6 (152-248)||(17804207-17804303)
chr6 (14-96)||(17804359-17804441)
chr6 (152-253)||(22430030-22430131)
chr6 (152-248)||(25767168-25767264)
chr6 (14-96)||(25767030-25767112)
chr6 (156-237)||(22862967-22863048)
chr6 (155-237)||(1644726-1644808)
chr6 (155-237)||(8243882-8243964)
chr6 (155-237)||(11566883-11566965)
chr6 (155-237)||(14472292-14472373)
chr6 (155-237)||(19870611-19870693)
chr6 (155-237)||(23395089-23395171)
chr6 (14-96)||(27415804-27415886)
chr6 (153-237)||(18955764-18955848)
chr6 (21-96)||(12706851-12706926)
chr6 (155-237)||(18917269-18917351)
chr6 (155-237)||(23989941-23990023)
chr6 (152-243)||(12706705-12706794)
chr6 (152-253)||(23414651-23414749)
chr6 (152-253)||(27556409-27556507)
chr6 (184-248)||(27325650-27325714)
chr6 (17-96)||(16741368-16741447)
chr6 (152-253)||(5616816-5616915)
chr6 (14-96)||(22429892-22429974)
chr6 (157-237)||(12618850-12618929)
chr6 (25-96)||(18955636-18955707)
chr6 (15-96)||(14472432-14472513)
chr6 (186-239)||(16523425-16523478)
chr6 (185-238)||(18180517-18180570)
chr6 (183-239)||(18907133-18907189)
chr6 (17-80)||(1587596-1587659)
chr6 (184-251)||(19873130-19873197)
chr6 (187-253)||(1644293-1644359)
chr6 (187-253)||(21702293-21702359)
chr6 (187-253)||(31478265-31478331)
chr6 (202-251)||(19862988-19863037)
chr6 (17-78)||(22592669-22592730)
chr6 (15-96)||(22863108-22863189)
chr6 (17-80)||(12496486-12496549)
chr6 (183-250)||(15041589-15041656)
chr6 (191-238)||(19790826-19790873)
chr6 (183-238)||(19848034-19848089)
chr6 (17-88)||(20803418-20803489)
chr6 (17-79)||(2685184-2685246)
chr6 (185-251)||(15894479-15894545)
chr6 (14-80)||(16523264-16523330)
chr6 (185-239)||(20908022-20908076)
chr6 (185-239)||(27553612-27553666)
chr6 (188-253)||(1587766-1587831)
chr6 (186-239)||(22408345-22408398)
chr6 (202-251)||(22432259-22432308)
chr6 (202-251)||(22438809-22438858)
chr6 (159-242)||(2685326-2685407)
chr6 (159-242)||(19662787-19662868)
chr6 (17-88)||(9482158-9482229)
chr6 (31-78)||(19790657-19790704)
chr6 (183-238)||(23992454-23992509)
chr6 (184-251)||(25642227-25642294)
chr6 (198-253)||(27416232-27416287)
chr6 (191-253)||(12496314-12496376)
chr6 (14-88)||(18907292-18907366)
chr6 (17-79)||(19662948-19663009)
chr6 (187-253)||(25135706-25135772)
chr6 (188-253)||(20803589-20803654)
chr6 (185-238)||(21766718-21766771)
chr6 (202-251)||(22334955-22335004)
chr6 (191-236)||(23657468-23657513)
chr6 (166-253)||(16624137-16624222)
chr6 (25-65)||(20907854-20907894)
chr6 (191-239)||(27567656-27567704)
[»] chr2 (47 HSPs)
chr2 (152-248)||(24735413-24735509)
chr2 (14-96)||(19688618-19688700)
chr2 (14-96)||(24735565-24735647)
chr2 (155-237)||(10101648-10101730)
chr2 (155-237)||(24649378-24649460)
chr2 (155-237)||(12901515-12901597)
chr2 (155-237)||(27379436-27379518)
chr2 (155-237)||(27383482-27383564)
chr2 (155-237)||(27601817-27601899)
chr2 (155-237)||(24628482-24628564)
chr2 (185-252)||(37524684-37524751)
chr2 (152-253)||(31344883-31344981)
chr2 (185-238)||(24716569-24716622)
chr2 (16-96)||(10101509-10101589)
chr2 (191-239)||(21318683-21318731)
chr2 (191-239)||(21327614-21327662)
chr2 (17-88)||(19928367-19928438)
chr2 (17-80)||(27263451-27263514)
chr2 (17-87)||(18855326-18855396)
chr2 (185-239)||(22811952-22812006)
chr2 (17-87)||(23187246-23187316)
chr2 (17-87)||(23598509-23598579)
chr2 (187-253)||(41666955-41667021)
chr2 (185-238)||(25961575-25961628)
chr2 (191-251)||(24673579-24673639)
chr2 (191-239)||(24869902-24869950)
chr2 (17-80)||(60993-61056)
chr2 (25-88)||(40428645-40428708)
chr2 (185-239)||(24174822-24174876)
chr2 (14-76)||(24716392-24716454)
chr2 (185-238)||(22799167-22799220)
chr2 (188-253)||(23187081-23187146)
chr2 (188-253)||(23598344-23598409)
chr2 (188-253)||(27263278-27263343)
chr2 (159-242)||(22461196-22461277)
chr2 (191-251)||(24680198-24680258)
chr2 (178-238)||(25963749-25963809)
chr2 (184-251)||(22741004-22741071)
chr2 (184-251)||(22758759-22758826)
chr2 (183-238)||(25616212-25616267)
chr2 (17-79)||(22461055-22461116)
chr2 (184-238)||(23038054-23038108)
chr2 (185-239)||(24655379-24655433)
chr2 (185-251)||(40622251-40622317)
chr2 (31-80)||(21918194-21918243)
chr2 (159-234)||(18855468-18855541)
chr2 (191-239)||(21916145-21916193)
[»] chr4 (55 HSPs)
chr4 (152-253)||(22634422-22634523)
chr4 (155-248)||(36133965-36134058)
chr4 (155-237)||(9556551-9556633)
chr4 (155-237)||(17810293-17810375)
chr4 (14-96)||(36133824-36133906)
chr4 (155-237)||(4561337-4561419)
chr4 (155-237)||(14757425-14757507)
chr4 (17-90)||(1951626-1951699)
chr4 (152-243)||(1951762-1951851)
chr4 (153-237)||(27534047-27534131)
chr4 (14-96)||(43256023-43256105)
chr4 (159-243)||(18222386-18222468)
chr4 (155-237)||(5756941-5757023)
chr4 (17-96)||(17152352-17152431)
chr4 (17-96)||(18222243-18222322)
chr4 (152-253)||(43256414-43256512)
chr4 (157-237)||(33742399-33742478)
chr4 (17-80)||(18228718-18228781)
chr4 (17-87)||(9530604-9530674)
chr4 (166-243)||(17152501-17152576)
chr4 (188-253)||(3412804-3412869)
chr4 (15-96)||(14757285-14757366)
chr4 (159-243)||(18228861-18228943)
chr4 (188-253)||(18236897-18236962)
chr4 (186-239)||(20157501-20157554)
chr4 (191-239)||(16488124-16488172)
chr4 (17-88)||(16243265-16243336)
chr4 (17-88)||(19757466-19757537)
chr4 (17-88)||(19782269-19782340)
chr4 (17-88)||(26243530-26243601)
chr4 (186-253)||(28569477-28569544)
chr4 (187-253)||(14708668-14708734)
chr4 (17-79)||(23139449-23139511)
chr4 (152-253)||(26243666-26243765)
chr4 (26-96)||(27534188-27534258)
chr4 (15-96)||(17810434-17810515)
chr4 (24-80)||(3412975-3413030)
chr4 (195-239)||(13813069-13813113)
chr4 (178-238)||(16348697-16348757)
chr4 (178-238)||(16356985-16357045)
chr4 (159-253)||(23139277-23139369)
chr4 (185-251)||(12570024-12570090)
chr4 (187-253)||(15224800-15224866)
chr4 (152-253)||(16243401-16243500)
chr4 (188-253)||(2014784-2014849)
chr4 (17-88)||(2014948-2015019)
chr4 (191-238)||(25555503-25555550)
chr4 (185-239)||(15353348-15353402)
chr4 (14-80)||(16348526-16348592)
chr4 (14-80)||(16356814-16356880)
chr4 (14-88)||(16487939-16488013)
chr4 (31-80)||(18602624-18602674)
chr4 (31-80)||(18609218-18609268)
chr4 (187-253)||(42997484-42997550)
chr4 (159-222)||(45938185-45938246)
[»] scaffold0044 (5 HSPs)
scaffold0044 (152-253)||(12909-13010)
scaffold0044 (152-253)||(19193-19294)
scaffold0044 (14-96)||(13066-13148)
scaffold0044 (14-96)||(19350-19432)
scaffold0044 (188-253)||(62266-62331)
[»] scaffold0029 (6 HSPs)
scaffold0029 (152-237)||(65528-65613)
scaffold0029 (155-237)||(61615-61697)
scaffold0029 (187-253)||(80300-80366)
scaffold0029 (15-96)||(80874-80955)
scaffold0029 (185-251)||(12773-12839)
scaffold0029 (166-237)||(80736-80805)
[»] chr5 (68 HSPs)
chr5 (152-253)||(23535588-23535688)
chr5 (152-248)||(17410450-17410546)
chr5 (155-237)||(15236783-15236865)
chr5 (155-237)||(19472723-19472805)
chr5 (155-237)||(20295868-20295950)
chr5 (14-96)||(23535451-23535533)
chr5 (14-96)||(18356489-18356571)
chr5 (159-243)||(42805436-42805518)
chr5 (17-88)||(18774374-18774445)
chr5 (14-96)||(20910662-20910744)
chr5 (152-253)||(20911172-20911270)
chr5 (18-79)||(20232729-20232790)
chr5 (24-88)||(17718311-17718375)
chr5 (152-243)||(18774219-18774308)
chr5 (153-243)||(18784062-18784150)
chr5 (17-88)||(18784217-18784288)
chr5 (17-96)||(42805582-42805661)
chr5 (152-253)||(18355963-18356061)
chr5 (185-239)||(21366705-21366759)
chr5 (17-87)||(26742611-26742681)
chr5 (185-238)||(1859017-1859070)
chr5 (14-59)||(17410646-17410691)
chr5 (185-238)||(23451371-23451424)
chr5 (172-237)||(40723607-40723672)
chr5 (187-251)||(24767588-24767652)
chr5 (17-88)||(33409398-33409469)
chr5 (187-253)||(21885223-21885289)
chr5 (185-238)||(23458615-23458668)
chr5 (185-238)||(23462876-23462929)
chr5 (159-242)||(20232568-20232649)
chr5 (167-242)||(21340782-21340855)
chr5 (191-239)||(26680604-26680652)
chr5 (159-242)||(26742754-26742835)
chr5 (191-239)||(26952211-26952259)
chr5 (187-253)||(10752949-10753015)
chr5 (14-80)||(21366527-21366593)
chr5 (14-76)||(23451539-23451601)
chr5 (14-76)||(23458783-23458845)
chr5 (14-76)||(23463044-23463106)
chr5 (17-79)||(26665996-26666058)
chr5 (17-79)||(26937593-26937655)
chr5 (185-238)||(123346-123399)
chr5 (188-253)||(4036225-4036290)
chr5 (15-96)||(15236643-15236724)
chr5 (185-238)||(23201383-23201436)
chr5 (17-78)||(25229271-25229332)
chr5 (188-253)||(25229441-25229506)
chr5 (17-78)||(25293427-25293488)
chr5 (188-253)||(25293597-25293662)
chr5 (159-242)||(26666138-26666219)
chr5 (159-242)||(26937735-26937816)
chr5 (191-239)||(31342169-31342217)
chr5 (17-80)||(4036398-4036461)
chr5 (31-78)||(12028443-12028490)
chr5 (191-238)||(12028612-12028659)
chr5 (17-88)||(16674322-16674393)
chr5 (183-238)||(17517240-17517295)
chr5 (191-238)||(17919198-17919245)
chr5 (191-238)||(20805575-20805622)
chr5 (204-251)||(23501415-23501462)
chr5 (17-96)||(24532913-24532992)
chr5 (17-79)||(21340632-21340694)
chr5 (185-239)||(24221899-24221953)
chr5 (187-253)||(26172470-26172536)
chr5 (184-238)||(26704098-26704152)
chr5 (184-238)||(26973831-26973885)
chr5 (185-238)||(20766997-20767050)
chr5 (159-242)||(24533055-24533136)
[»] scaffold0525 (2 HSPs)
scaffold0525 (155-237)||(3878-3960)
scaffold0525 (15-96)||(3738-3819)
[»] scaffold0228 (2 HSPs)
scaffold0228 (152-253)||(18632-18733)
scaffold0228 (25-96)||(18505-18576)
[»] scaffold0349 (2 HSPs)
scaffold0349 (155-237)||(12443-12525)
scaffold0349 (15-96)||(12584-12665)
[»] scaffold0001 (4 HSPs)
scaffold0001 (14-96)||(173452-173534)
scaffold0001 (153-253)||(173297-173395)
scaffold0001 (185-239)||(422572-422626)
scaffold0001 (25-65)||(422404-422444)
[»] chr8 (44 HSPs)
chr8 (155-237)||(43251834-43251916)
chr8 (155-237)||(19278286-19278368)
chr8 (155-237)||(21972588-21972670)
chr8 (155-237)||(21976673-21976755)
chr8 (152-243)||(16231476-16231565)
chr8 (17-96)||(16231340-16231419)
chr8 (17-96)||(22028719-22028798)
chr8 (17-88)||(23834343-23834414)
chr8 (152-253)||(21387079-21387177)
chr8 (183-252)||(15603055-15603124)
chr8 (17-96)||(18619640-18619719)
chr8 (17-96)||(22045046-22045125)
chr8 (183-252)||(15611507-15611576)
chr8 (153-253)||(21383659-21383756)
chr8 (152-243)||(22044900-22044989)
chr8 (17-80)||(30308619-30308682)
chr8 (186-252)||(22010716-22010782)
chr8 (185-239)||(30643332-30643386)
chr8 (166-253)||(14398123-14398208)
chr8 (17-88)||(23846880-23846951)
chr8 (155-205)||(22111904-22111954)
chr8 (185-238)||(16861365-16861418)
chr8 (186-253)||(17055412-17055479)
chr8 (183-238)||(18678141-18678196)
chr8 (183-238)||(32121759-32121814)
chr8 (178-252)||(16410287-16410361)
chr8 (185-251)||(17353984-17354050)
chr8 (14-96)||(20465900-20465982)
chr8 (185-251)||(24755724-24755790)
chr8 (187-253)||(32598684-32598750)
chr8 (187-253)||(32605216-32605282)
chr8 (185-238)||(19259632-19259685)
chr8 (185-238)||(39094965-39095018)
chr8 (152-243)||(23834188-23834277)
chr8 (191-238)||(20856472-20856518)
chr8 (185-251)||(16184730-16184796)
chr8 (14-88)||(19259443-19259517)
chr8 (185-239)||(20466079-20466133)
chr8 (23-88)||(15538618-15538683)
chr8 (14-67)||(16410116-16410169)
chr8 (185-237)||(377295-377347)
chr8 (159-234)||(17828590-17828663)
chr8 (178-238)||(17926739-17926799)
chr8 (25-69)||(39094814-39094858)
[»] scaffold0013 (2 HSPs)
scaffold0013 (152-253)||(2673-2773)
scaffold0013 (14-96)||(2535-2617)
[»] scaffold0405 (2 HSPs)
scaffold0405 (14-90)||(9527-9603)
scaffold0405 (166-253)||(9681-9766)
[»] scaffold0372 (1 HSPs)
scaffold0372 (155-237)||(5104-5186)
[»] scaffold0177 (2 HSPs)
scaffold0177 (14-96)||(13349-13431)
scaffold0177 (152-222)||(13487-13557)
[»] scaffold0009 (2 HSPs)
scaffold0009 (152-253)||(228374-228473)
scaffold0009 (17-96)||(228238-228317)
[»] scaffold0004 (2 HSPs)
scaffold0004 (26-96)||(10458-10528)
scaffold0004 (184-251)||(69804-69871)
[»] scaffold0028 (1 HSPs)
scaffold0028 (155-237)||(58722-58804)
[»] scaffold0003 (5 HSPs)
scaffold0003 (14-96)||(71475-71557)
scaffold0003 (185-239)||(414091-414145)
scaffold0003 (17-78)||(139890-139951)
scaffold0003 (198-253)||(71074-71129)
scaffold0003 (159-234)||(139736-139809)
[»] scaffold0120 (2 HSPs)
scaffold0120 (17-89)||(19882-19954)
scaffold0120 (152-253)||(20018-20117)
[»] scaffold0168 (2 HSPs)
scaffold0168 (17-96)||(3395-3474)
scaffold0168 (152-243)||(3531-3620)
[»] scaffold0012 (2 HSPs)
scaffold0012 (17-96)||(24833-24912)
scaffold0012 (162-243)||(24980-25059)
[»] scaffold0109 (3 HSPs)
scaffold0109 (155-237)||(35946-36027)
scaffold0109 (17-88)||(7114-7185)
scaffold0109 (187-253)||(6950-7016)
[»] scaffold0334 (2 HSPs)
scaffold0334 (159-243)||(18368-18450)
scaffold0334 (17-96)||(18225-18304)
[»] scaffold0425 (1 HSPs)
scaffold0425 (185-251)||(169-235)
[»] scaffold1461 (1 HSPs)
scaffold1461 (24-96)||(91-163)
[»] scaffold0476 (2 HSPs)
scaffold0476 (152-239)||(5608-5702)
scaffold0476 (152-239)||(6803-6897)
[»] scaffold0293 (1 HSPs)
scaffold0293 (166-253)||(20479-20564)
[»] scaffold0216 (1 HSPs)
scaffold0216 (183-239)||(17150-17206)
[»] scaffold1052 (1 HSPs)
scaffold1052 (185-248)||(2918-2981)
[»] scaffold0299 (1 HSPs)
scaffold0299 (152-246)||(6693-6784)
[»] scaffold0010 (2 HSPs)
scaffold0010 (17-88)||(23386-23457)
scaffold0010 (152-243)||(23232-23321)
[»] scaffold0761 (1 HSPs)
scaffold0761 (185-239)||(6349-6403)
[»] scaffold0676 (3 HSPs)
scaffold0676 (14-96)||(4603-4685)
scaffold0676 (178-239)||(4452-4513)
scaffold0676 (166-237)||(471-541)
[»] scaffold0327 (2 HSPs)
scaffold0327 (185-251)||(299-365)
scaffold0327 (14-88)||(460-534)
[»] scaffold0130 (2 HSPs)
scaffold0130 (14-80)||(5862-5928)
scaffold0130 (188-253)||(6035-6100)
[»] scaffold0124 (2 HSPs)
scaffold0124 (185-239)||(42649-42703)
scaffold0124 (31-88)||(42803-42860)
[»] scaffold0051 (1 HSPs)
scaffold0051 (152-253)||(30890-30988)
[»] scaffold0022 (1 HSPs)
scaffold0022 (185-239)||(73807-73861)
[»] scaffold1552 (2 HSPs)
scaffold1552 (188-253)||(374-439)
scaffold1552 (24-80)||(531-587)
[»] scaffold0615 (2 HSPs)
scaffold0615 (185-238)||(2125-2178)
scaffold0615 (31-89)||(1962-2020)
[»] scaffold0393 (2 HSPs)
scaffold0393 (186-239)||(1516-1569)
scaffold0393 (14-80)||(1682-1748)
[»] scaffold1296 (2 HSPs)
scaffold1296 (191-239)||(415-463)
scaffold1296 (14-88)||(574-648)
[»] scaffold0166 (1 HSPs)
scaffold0166 (187-251)||(10085-10149)
[»] scaffold1326 (2 HSPs)
scaffold1326 (25-88)||(1362-1425)
scaffold1326 (185-239)||(1530-1584)
[»] scaffold0546 (2 HSPs)
scaffold0546 (17-88)||(6122-6193)
scaffold0546 (187-253)||(6291-6357)
[»] scaffold0104 (2 HSPs)
scaffold0104 (183-238)||(9536-9591)
scaffold0104 (178-238)||(1853-1913)
[»] scaffold0070 (2 HSPs)
scaffold0070 (17-88)||(10073-10144)
scaffold0070 (152-253)||(9909-10008)
[»] scaffold0671 (1 HSPs)
scaffold0671 (185-251)||(6105-6171)
[»] scaffold0585 (1 HSPs)
scaffold0585 (187-253)||(9340-9406)
[»] scaffold0184 (1 HSPs)
scaffold0184 (14-88)||(4086-4160)
[»] scaffold0107 (1 HSPs)
scaffold0107 (14-96)||(15280-15361)
[»] scaffold0043 (1 HSPs)
scaffold0043 (187-253)||(77205-77271)
[»] scaffold0193 (1 HSPs)
scaffold0193 (17-78)||(9600-9661)
[»] scaffold0016 (1 HSPs)
scaffold0016 (184-253)||(207880-207949)
[»] scaffold0008 (3 HSPs)
scaffold0008 (185-238)||(30783-30836)
scaffold0008 (187-253)||(1882-1948)
scaffold0008 (14-67)||(30606-30659)
[»] scaffold0132 (2 HSPs)
scaffold0132 (23-87)||(36476-36540)
scaffold0132 (167-234)||(36331-36396)
[»] scaffold0079 (2 HSPs)
scaffold0079 (178-238)||(44104-44164)
scaffold0079 (14-80)||(44269-44335)
[»] scaffold0284 (1 HSPs)
scaffold0284 (17-88)||(18524-18595)
[»] scaffold0139 (1 HSPs)
scaffold0139 (184-251)||(19990-20057)
[»] scaffold0080 (2 HSPs)
scaffold0080 (184-239)||(18695-18750)
scaffold0080 (14-91)||(18517-18594)
[»] scaffold0042 (2 HSPs)
scaffold0042 (17-88)||(64023-64094)
scaffold0042 (185-239)||(34960-35014)
[»] scaffold0550 (1 HSPs)
scaffold0550 (185-239)||(7493-7547)
[»] scaffold0371 (1 HSPs)
scaffold0371 (187-253)||(15343-15409)
[»] scaffold0346 (1 HSPs)
scaffold0346 (191-237)||(15111-15157)
[»] scaffold0210 (4 HSPs)
scaffold0210 (185-251)||(21844-21910)
scaffold0210 (185-251)||(29736-29802)
scaffold0210 (17-87)||(21670-21740)
scaffold0210 (17-87)||(29562-29632)
[»] scaffold0111 (2 HSPs)
scaffold0111 (187-253)||(8505-8571)
scaffold0111 (187-253)||(15649-15715)
[»] scaffold0093 (1 HSPs)
scaffold0093 (181-251)||(4841-4911)
[»] scaffold0081 (3 HSPs)
scaffold0081 (185-251)||(14674-14740)
scaffold0081 (185-251)||(23689-23755)
scaffold0081 (185-251)||(39113-39179)
[»] scaffold0056 (1 HSPs)
scaffold0056 (185-251)||(14127-14193)
[»] scaffold0037 (2 HSPs)
scaffold0037 (187-253)||(80810-80876)
scaffold0037 (14-80)||(21430-21496)
[»] scaffold0023 (1 HSPs)
scaffold0023 (185-251)||(38520-38586)
[»] scaffold0297 (2 HSPs)
scaffold0297 (202-251)||(15737-15786)
scaffold0297 (202-251)||(10580-10629)
[»] scaffold0171 (1 HSPs)
scaffold0171 (185-238)||(35552-35605)
[»] scaffold0017 (2 HSPs)
scaffold0017 (185-238)||(19773-19826)
scaffold0017 (185-238)||(15251-15304)
[»] scaffold0367 (1 HSPs)
scaffold0367 (178-238)||(920-980)
[»] scaffold0637 (2 HSPs)
scaffold0637 (191-238)||(8583-8630)
scaffold0637 (31-78)||(8752-8799)
[»] scaffold0015 (1 HSPs)
scaffold0015 (25-88)||(192189-192252)
[»] scaffold0439 (2 HSPs)
scaffold0439 (185-239)||(2477-2531)
scaffold0439 (185-239)||(10337-10391)
[»] scaffold0215 (1 HSPs)
scaffold0215 (185-251)||(26838-26904)
[»] scaffold0102 (1 HSPs)
scaffold0102 (184-234)||(48500-48550)
[»] scaffold0101 (1 HSPs)
scaffold0101 (185-251)||(9004-9070)
[»] scaffold0035 (1 HSPs)
scaffold0035 (14-96)||(46588-46670)
[»] scaffold0034 (1 HSPs)
scaffold0034 (186-252)||(16696-16762)
[»] scaffold0574 (1 HSPs)
scaffold0574 (205-238)||(7878-7911)
[»] scaffold0342 (1 HSPs)
scaffold0342 (185-238)||(7311-7364)
[»] scaffold0158 (2 HSPs)
scaffold0158 (186-239)||(2854-2907)
scaffold0158 (186-239)||(6520-6573)
[»] scaffold0096 (1 HSPs)
scaffold0096 (185-238)||(16389-16442)
[»] scaffold0021 (1 HSPs)
scaffold0021 (34-87)||(174952-175005)
[»] scaffold0020 (1 HSPs)
scaffold0020 (202-238)||(178921-178957)


Alignment Details
Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 12318232 - 12318132
Alignment:
Q  153 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  12318232 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagatgatg 12318133  T
Q  253 a 253  Q
    |    
T  12318132 a 12318132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 15580793 - 15580696
Alignment:
Q  156 aagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  15580793 aagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctatcgttatttaactaagttgcatgagtctgaataagatgatga 15580696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 13635469 - 13635570
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| ||||    
T  13635469 caagaaattgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagttgat 13635568  T
Q  252 ga 253  Q
    ||    
T  13635569 ga 13635570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 152 - 248
Target Start/End: Complemental strand, 11312754 - 11312658
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  11312754 caagaagttgttgaagatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 11312658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 11312892 - 11312810
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11312892 tgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 11312810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 16583360 - 16583261
Alignment:
Q  154 agaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  | |||||||||||||||||||| ||||||    
T  16583360 agaaattgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactacgttgcatgagtctgaataagttgatga 16583261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 15605134 - 15605216
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15605134 tgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgttaag 15605216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 12318368 - 12318289
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12318368 ttaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgttaag 12318289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 15605272 - 15605374
Alignment:
Q  152 caagaagttgttgaaaatgaatt-gatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatga 250  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||  ||  |||||||||||||||| |||||    
T  15605272 caagaagttgttgaaaatgaatttgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaaaatgcatgagtctgaatatgatga 15605371  T
Q  251 tga 253  Q
    |||    
T  15605372 tga 15605374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 70768 - 70850
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  70768 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 70850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 74877 - 74959
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  74877 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 74959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 26292498 - 26292416
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||  |||||||||||||    
T  26292498 gaagttgttgaaaatgaattgatattaagctgttgatataatctgattatgctgctattgttatttaactaagttgcatgagt 26292416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 39722369 - 39722287
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  39722369 gaagttgttgaaaatgagttgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 39722287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 16583487 - 16583417
Alignment:
Q  26 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16583487 gaaccttaggtactaatgagacctatataagatattaactgagaactgtgaagctattatgaaatgctaag 16583417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 12714967 - 12714885
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  12714967 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 12714885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 12718771 - 12718689
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  12718771 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 12718689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 13635343 - 13635413
Alignment:
Q  26 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13635343 gaaccttaggtactaatgaggcctatttaagatattaacagagaactgtgaagctattatgaaatgctaag 13635413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 16114344 - 16114262
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  16114344 gaagttgttgaaaatgaattgataataagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 16114262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 16117497 - 16117415
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  16117497 gaagttgttgaaaatgaattgataataagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 16117415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 16907204 - 16907286
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  16907204 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 16907286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 18283469 - 18283387
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  18283469 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 18283387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 9593586 - 9593513
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaat 90  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  9593586 ttaggaaaggaactttaggtactaatgagacctaataaagatattaactgagaactgtgaagcttttatgaaat 9593513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 9644549 - 9644476
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaat 90  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  9644549 ttaggaaaggaactttaggtactaatgagacctaataaagatattaactgagaactgtgaagcttttatgaaat 9644476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 9593450 - 9593361
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||| ||||||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||    
T  9593450 caagaaattgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaat 9593361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 33210 - 33128
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| || || |||||||||| |||||||||||||   ||||||||||||    
T  33210 gaagttgttgaaaatgaattgatattaagctgttgatatgttccgattatgctgttattgttatttaactcagttgcatgagt 33128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 12704662 - 12704744
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| |||||||||| |||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  12704662 gaagttgttgaaaatgaattggtattaagctgctgatataatctgattatgctgctattgttatttaactaagttacatgagt 12704744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 18279506 - 18279424
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||| ||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  18279506 gaagttgttgaaaatgaattggtattaagttgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 18279424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 18923 - 19002
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| |||||| ||| ||||    
T  18923 ttaggaaaggaactttaggtgctaatgagacctattaaagatattgactgagaactgtgaagcttttatgatatgttaag 19002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 11987308 - 11987225
Alignment:
Q  160 tgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataa 245  Q
    |||||||||||| ||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||||    
T  11987308 tgttgaaaatgatttgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaataa 11987225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 12723682 - 12723600
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||| ||||| ||||||||||||||| | |||||||||||||| |||||||||||||  ||||| |||||||    
T  12723682 gaagttgttgaaaataaattggtattaagctgttgatataatctgattatgctgatattgttatttaactaagttacatgagt 12723600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 13918781 - 13918879
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  13918781 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 13918877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 15580935 - 15580853
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| | ||||||||||||  || ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  15580935 tgattaggaatggaactttaggttatagtgagacctatttaggatgttaactgaaaactgtgaagctattatgaaatgctaag 15580853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 19066 - 19148
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    ||||||||||||||||| |||||||||  ||||||||| |||||||||||| | ||||||||||  |||||||||||||||||||    
T  19066 ttgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgagtctgaat 19148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 1859087 - 1859185
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||||||||||| |||||| |||||||||  || |||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  1859087 caagatgttgttgaaaa-gaattgttattaagct--tgttgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 1859183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 2832482 - 2832548
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||||| |||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||    
T  2832482 tgttgatgggatctgattatgctgctattgttatttaactaagttgcatgagtctatataagatgat 2832548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 16724496 - 16724557
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 78  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  16724496 ttaggaaaggaaccttaggtactaatgagacctattaaagatattgactgagaactgtgaag 16724557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 17701510 - 17701571
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 78  Q
    ||||| ||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  17701510 ttaggaaaggaaccttaggtactaatgagacctattaaagatattgactgagaactgtgaag 17701571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 48593321 - 48593374
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaa 70  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  48593321 ttaggaaaggaactttaggtactactgagacctatttaagatattaactgagaa 48593374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 7519359 - 7519447
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||| ||||||||||||    
T  7519359 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttggatgagtctgaat 7519447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 2530391 - 2530491
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatg-tgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatga 250  Q
    |||||| ||| ||||||||||||| |||||||||  ||||  |||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| |||    
T  2530391 caagaaattgctgaaaatgaattgttattaagct--tgattatgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttga 2530488  T
Q  251 tga 253  Q
    |||    
T  2530489 tga 2530491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 3271901 - 3271846
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  3271901 gctgttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtc 3271846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 9751794 - 9751849
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||||||| ||||||||||||||||||||||||||||||  |||||||||||||||    
T  9751794 ctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagtct 9751849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 13462002 - 13461931
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| |||||||||||||| ||||||||||||||| ||||| || |||||||||| ||||||| |||||||    
T  13462002 ttaggaaaggaactttaggtgctaatgagacctattaaagatgttgactgagaactctgaagcttttatgaa 13461931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 16438899 - 16438978
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| |||||||||||||| ||| ||||||||||| |||||||  ||||||||||||||||||  ||||||||| ||||    
T  16438899 ttaggaaaggaactttaggtgctagtgagacctattaaagatatggactgagaactgtgaagcttatatgaaatgttaag 16438978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 16457358 - 16457446
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 242  Q
    |||||| ||||||||||||| ||| |||||||||  ||||||||| |||||||||||| ||||||||| ||  | ||||||||||||||||    
T  16457358 caagaaattgttgaaaatgatttgttattaagct--tgatgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaa 16457446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 11987447 - 11987373
Alignment:
Q  23 aaggaactttaggtactaatgagacctatttaa-gatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| |||||||||| ||||||||||| || |||||| |||||||||||||||||| |||||||||| ||||    
T  11987447 aaggaaccttaggtactagtgagacctattaaaagatattgactgagaactgtgaagcttttatgaaatgttaag 11987373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 25927536 - 25927602
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||||    
T  25927536 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgatga 25927602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 12321780 - 12321836
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||||| ||||||||||||||||||||||||||||||||  | |||||||||||||    
T  12321780 gctgttgttgtgatctgattatgctgctattgttatttaactacgttgcatgagtct 12321836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 13149395 - 13149324
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  13149395 ttaggaaaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 13149324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 14429960 - 14429905
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||||| |||||||||||||||| |||||||||||||||  |||||||||||||||    
T  14429960 ctgttgttgtgatctgattatgcggctattgttatttaactaagttgcatgagtct 14429905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 15728565 - 15728502
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    ||||| |||||||||||||| ||||||||||||| | | |||||| ||||||||||||||||||    
T  15728565 ttaggaaaggaactttaggtgctaatgagacctaataatgatattgactgagaactgtgaagct 15728502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 42205347 - 42205284
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||||||||||| ||||| ||||||||| |||| |||||||||| |||||||||| |||||||    
T  42205347 ggaactttaggtagtaatgtgacctatttgagatgttaactgagacctgtgaagctgttatgaa 42205284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 16275563 - 16275497
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  16275563 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatga 16275497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 19649530 - 19649596
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||| |||||  ||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  19649530 tgttgttgtaatctgtctatgctgctattgttatttaaccaagttgcatgagtcggtataagatgat 19649596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 33350 - 33269
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||||||||||| ||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  33350 gattaggaatggaactttaggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 33269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 70628 - 70709
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||||||||||| ||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  70628 gattaggaatggaactttaggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 70709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 74737 - 74818
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||||||||||| ||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  74737 gattaggaatggaactttaggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 74818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 35151676 - 35151611
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  35151676 tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatga 35151611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 39267950 - 39267994
Alignment:
Q  195 atctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||||||||||||||||||||||||||  |||||||||||||||    
T  39267950 atctgattatgctgctattgttatttaactaagttgcatgagtct 39267994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 2760207 - 2760140
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 252  Q
    ||||| |||||||||||||||||||| | |||||||||  |||||||||||||||  | |||||||||    
T  2760207 tgttgttgtgatctgattatgctgctttcgttatttaactaagttgcatgagtctatacaagatgatg 2760140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 6801452 - 6801383
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 87  Q
    ||||| ||||||||| |||| ||| |||||||||||  ||||||| ||||||||||||||||| |||||||    
T  6801452 ttaggaaaggaactt-aggtgctagtgagacctattggagatattgactgagaactgtgaagccattatga 6801383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 13149259 - 13149160
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||||||| ||||| ||| |||||| |   ||||||||| |||||||||||| | ||||||||||  |||||||||| || |||||||| ||||    
T  13149259 caagaaattgttgagaatgatttgttattaaacc--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtgtatgaataagctgat 13149162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 14430137 - 14430071
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    |||||||||  ||| | ||||||| ||||| |||||||||||||| |||||||||| ||||||||||    
T  14430137 tgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagct 14430071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 8917497 - 8917432
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||| ||| ||||||||| ||  ||||||||||||| |||||||| ||||||    
T  8917497 tgatgtgatttgattatgttgcaattgttattaaactaagttgcatgagtatgaataagttgatga 8917432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 8917661 - 8917604
Alignment:
Q  23 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    |||||||||| ||| ||||||||||||||| |||||||| || ||||||| |||||||    
T  8917661 aaggaactttgggtgctaatgagacctattaaagatattgaccgagaactctgaagct 8917604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 14216985 - 14216920
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||    
T  14216985 tgatgtgatttgattatgctgcaattgttattgaactaagttgcatgaatatgaataagttgatga 14216920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 15728395 - 15728330
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||    
T  15728395 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgaatatgaataagttgatga 15728330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 16724665 - 16724730
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| | |||||||||| ||||||||| ||  ||||||||||||| |||||||| ||||||    
T  16724665 tgatgtgatttcattatgctgcaattgttattaaactaagttgcatgagtatgaataagttgatga 16724730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 17701679 - 17701744
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| | |||||||||| ||||||||| ||  ||||||||||||| |||||||| ||||||    
T  17701679 tgatgtgatttcattatgctgcaattgttattaaactaagttgcatgagtatgaataagttgatga 17701744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 24054523 - 24054474
Alignment:
Q  202 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||||||||||||| |||| ||||||||||||||| | ||||||||||    
T  24054523 tatgctgctattgttaattaaccaagttgcatgagtcagtataagatgat 24054474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 253
Target Start/End: Complemental strand, 18425528 - 18425443
Alignment:
Q  166 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||  |||| |||  |||||||||||| ||||||||||||  |||||||| || | |||||||| ||||||    
T  18425528 aaatgaattgttattaagct--tgatatgaattgattatgctgcaattgttatttaactaagttgcaagaatatgaataagttgatga 18425443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 18557199 - 18557151
Alignment:
Q  31 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 79  Q
    |||||| ||| ||||||||||| ||||||||| ||||||||||||||||    
T  18557199 ttaggtgctagtgagacctattaaagatattatctgagaactgtgaagc 18557151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 96
Target Start/End: Original strand, 2530040 - 2530087
Alignment:
Q  49 tatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||||| ||||||| |||||||||||||||| ||||||| ||||    
T  2530040 tatttaagatgttaactgggaactgtgaagctattgtgaaatgttaag 2530087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 14217155 - 14217092
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    ||||| |||||||| ||||| ||||||||||||| | | |||||| ||| ||||||||||||||    
T  14217155 ttaggaaaggaactgtaggtgctaatgagacctaataatgatattgactaagaactgtgaagct 14217092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 42204064 - 42204017
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||||||||||||||||||| ||||| |||||  ||||||||||||||    
T  42204064 tgtgatctgattatgctgctgttgttgtttaactaagttgcatgagtc 42204017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 9446199 - 9446253
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||| ||||  ||||||||||  |||||||||||||||    
T  9446199 tgttgttgtgatctgattatgttgctgctgttatttaactaagttgcatgagtct 9446253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 13461831 - 13461766
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||| ||| ||  || |||||||||| |||||||| ||||||    
T  13461831 tgatgtgatttgattatgctgcaattgtaattaaactaatttgcatgagtatgaataagttgatga 13461766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 14152048 - 14152089
Alignment:
Q  207 tgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    ||||||||||| ||||  ||||||||||||||||||||||||    
T  14152048 tgctattgttaattaactaagttgcatgagtctgaataagat 14152089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 18557043 - 18556978
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| | ||||||||||  ||||||||||| | || ||||| ||||||    
T  18557043 tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgactatgtataagttgatga 18556978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 24783100 - 24783199
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  24783100 caagaagttgttgaaaatgaattgatattaagctgttcatgtgatctgattatgctgctattgttatttaactaagttgcatgagtctgaataagatgat 24783199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 36819308 - 36819410
Alignment:
Q  152 caagaagttgttgaaaatgaatt-gatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatga 250  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| |||    
T  36819308 caagaagttgttgaaaatgaatttgatattaagctggtgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagttga 36819407  T
Q  251 tga 253  Q
    |||    
T  36819408 tga 36819410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 1010826 - 1010744
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  1010826 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 1010744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 16080306 - 16080388
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  16080306 tgattaggaaaggaactttaggtactaatgagacctatttaagagattaactgagaactgtgaagcttttatgaaatgctaag 16080388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 16080444 - 16080545
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||||| ||||||    
T  16080444 caagaagttgttgaaaatgaattgataataagttattgatgtgatctgattatgctgctatttttaattaactaagttgcatgagtctgaatatgatgat 16080543  T
Q  252 ga 253  Q
    ||    
T  16080544 ga 16080545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 36819170 - 36819252
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  36819170 tgattaggaaaggaactttaggtactaatgagacctatttaagatattaaatgagaactgtgaagcttttatgaaatgttaag 36819252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 20228812 - 20228894
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||  |||||||||||||    
T  20228812 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgccattgttattaaactaagttgcatgagt 20228894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 16375461 - 16375543
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  16375461 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 16375543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 21407458 - 21407376
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  21407458 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 21407376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 33797767 - 33797695
Alignment:
Q  24 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  33797767 aggaaccttaggtactaatgagacctatttaagatgttaactgagaactgtgaagctattgtgaaatgttaag 33797695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 19212108 - 19212029
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| |||||||||||||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||| ||||    
T  19212108 ttaggaaaggaactttaggtactaatgagacctataaaagatattgactgagaactgtgaagcttttatgaaatgttaag 19212029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 52639644 - 52639562
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||||| |||||||||||||  ||||| |||||||    
T  52639644 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgttattgttatttaactaagttacatgagt 52639562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 20138324 - 20138253
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| | |||||||    
T  20138324 ttagggaaggaactttaggtactaatgagacctattaaagataataactgtgaactgtgaagtttttatgaa 20138253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 33797386 - 33797288
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  33797386 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 33797290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 19211972 - 19211883
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||| ||||||| ||||||||| |||||||||  ||| ||||| |||||||||||| ||||||||||||  |||||||||||||||||||    
T  19211972 caagaaattgttgagaatgaattgttattaagct--tgacgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaat 19211883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 23819164 - 23819243
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| ||||||| |||||| ||||||||||||||| |||||||| |||||||||||||||||| |||||| ||| ||||    
T  23819164 ttaggaaaggaaccttaggtgctaatgagacctattaaagatattgactgagaactgtgaagcttttatgagatgttaag 23819243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 18393825 - 18393899
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||||| | ||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||| |||||||    
T  18393825 tgattaggaatggaactttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaa 18393899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 18182159 - 18182215
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  18182159 gctgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 18182215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 45310228 - 45310302
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||||| | ||||||||||||| ||||| | |||||||||||| |||||||||| |||||||||| |||||||    
T  45310228 tgattaggaatggaactttaggtagtaatgtggcctatttaagatgttaactgagatctgtgaagctgttatgaa 45310302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 1010966 - 1010885
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  1010966 gattaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 1010885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 17678626 - 17678679
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  17678626 tgttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtc 17678679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 3472969 - 3473017
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  3472969 tgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 3473017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 20138188 - 20138099
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||| ||||||| ||||| ||| |||||| |   ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||    
T  20138188 caagaaattgttgagaatgatttgttattaaacc--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaat 20138099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 18882608 - 18882537
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| |||||||||||||| ||| |||||||||||  |||||||||||||||| ||||||||  |||||||    
T  18882608 ttaggaaaggaactttaggtgctagtgagacctattagagatattaactgagaattgtgaagcctttatgaa 18882537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 24782962 - 24783044
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| | ||||||||| ||  || ||||||||| ||||||| |||||||| || ||||||||| |||||||||||||||    
T  24782962 tgattaggaatggaactttaagttatagtgagacctacttaagatgttaactgaaaattgtgaagctgttatgaaatgctaag 24783044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 21313185 - 21313138
Alignment:
Q  201 ttatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  21313185 ttatgctgctattgttaattaactaagttgcatgagtctgaataagat 21313138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 3705105 - 3705159
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||||||||  ||||||||||  |||||||||||||||    
T  3705105 tgttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagtct 3705159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 23819300 - 23819383
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||||| ||| ||||||||||||| |||||||||  |||| |||  |||||||||||| ||||||||| ||  |||||||||||||    
T  23819300 caagaaattgctgaaaatgaattgttattaagct--tgatatgaattgattatgctgcaattgttattaaacgaagttgcatgagt 23819383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 22449299 - 22449360
Alignment:
Q  178 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||| ||| ||| ||||||||||||||||||||| | ||||||||  |||||||||||||||    
T  22449299 attatgctcttgttgtgatctgattatgctgctactattatttaactaagttgcatgagtct 22449360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 18394012 - 18394059
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  18394012 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 18394059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 20229267 - 20229330
Alignment:
Q  190 atgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||| |||||||||||  ||||||||||||  |||||||| |||| |||||||| ||||||    
T  20229267 atgtgatttgattatgctggaattgttatttaactaagttgcaagagtatgaataagttgatga 20229330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 21788081 - 21788136
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||| |||||||||  ||||||||||| |||||||||  ||||||||||||||    
T  21788081 gctgttgttgtgatctgcctatgctgctatggttatttaactaagttgcatgagtc 21788136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 33050067 - 33050118
Alignment:
Q  186 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||| ||||||||||||||||||||  ||||||||||  |||||||||||||    
T  33050067 gttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagt 33050118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 45310415 - 45310462
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||||||||||||||||||| | |||||||||  ||||||||||||||    
T  45310415 tgtgatctgattatgctgctgtcgttatttaactaagttgcatgagtc 45310462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 45489621 - 45489668
Alignment:
Q  31 ttaggtactaatgagacctatttaagatattaactgagaactgtgaag 78  Q
    ||||||| |||||| ||||||||||||| |||||||||| ||||||||    
T  45489621 ttaggtagtaatgaaacctatttaagatgttaactgagacctgtgaag 45489668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 12647110 - 12647049
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 79  Q
    ||||| ||||||||| |||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  12647110 ttaggaaaggaactt-aggtgctagtgagacctattggagatattgactgagaactgtgaagc 12647049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 233
Target Start/End: Complemental strand, 18882472 - 18882393
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcat 233  Q
    |||||| ||||||| ||||| ||| |||||||||  ||||||||| |||||||||||  | ||||||||||  |||||||||    
T  18882472 caagaaattgttgataatgatttgttattaagct--tgatgtgatttgattatgctgaaaatgttatttaactaagttgcat 18882393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 21022896 - 21022822
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||| ||| ||| | ||||||| ||||| ||||||| |||||| |||||||  | ||||||||||||||||||    
T  21022896 tgattaaggatggacccttaggtagtaatgtgacctatataagatgttaactgcaatctgtgaagctattatgaa 21022822  T

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Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 21714623 - 21714569
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||||| ||| |||||  ||||||||||||||||||||| |||| ||||||||||    
T  21714623 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagctgcatgagtc 21714569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 46975708 - 46975638
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 87  Q
    ||||| || |||||||||||||||||| |||||||| |||||| | |||| ||||| ||||| | ||||||    
T  46975708 ttaggaaatgaactttaggtactaatgtgacctattaaagataatgactgtgaactatgaagtttttatga 46975638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 20091534 - 20091583
Alignment:
Q  202 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||||||||||||||||| | |||||||||||||   ||||||||||    
T  20091534 tatgctgctattgttatttaacctagttgcatgagtcgatataagatgat 20091583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 12646969 - 12646888
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 242  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | ||||||||| ||||||    
T  12646969 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgaatctgaa 12646888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 8e-39; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 15482769 - 15482668
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||| ||||    
T  15482769 caagaaattgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagttgat 15482670  T
Q  252 ga 253  Q
    ||    
T  15482669 ga 15482668  T

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Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 152 - 248
Target Start/End: Original strand, 2897823 - 2897919
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  2897823 caagaagttgatgaaaataaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaactaagttgcatgagtctgaataagat 2897919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 20461362 - 20461444
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20461362 tgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 20461444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 7793213 - 7793293
Alignment:
Q  16 attagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7793213 attaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 7793293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 152 - 248
Target Start/End: Original strand, 20461500 - 20461596
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  20461500 caagaagttgttgaagatgaattgatattaagttgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 20461596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 152 - 248
Target Start/End: Original strand, 7793349 - 7793446
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctg-attatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  7793349 caagaagttgttgaagatgaattgatattaagctgttgatgtgatctgaattatgctgctattgttaattaactaagttgcatgagtctgaataagat 7793446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 327026 - 327108
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  327026 tgattagaaaaggaaccttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 30066052 - 30065970
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  30066052 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 30065970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 11070174 - 11070092
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  11070174 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 11070092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 11165532 - 11165614
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| |||||||    
T  11165532 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttacatgagt 11165614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 15482906 - 15482825
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15482906 tgattaggaaatgaactt-aggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 15482825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 15617476 - 15617398
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  15617476 ttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 15617398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 248
Target Start/End: Original strand, 327164 - 327261
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctga-ttatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  327164 caagaaattgttgaagatgaattgatattaagctgttgatgtgatcttagttatgctgctattgttaattaactaagttgcatgagtctgaataagat 327261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 31097555 - 31097656
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||| ||||  | |||||||||||||||||||| ||||    
T  31097555 caagaaattgttgaaaatgaattgttattaagctattgatgtgatctgattatgctgcaattgttaattaactatgttgcatgagtctgaataagttgat 31097654  T
Q  252 ga 253  Q
    ||    
T  31097655 ga 31097656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 55022973 - 55022891
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||| |||||||    
T  55022973 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatactgctattgttatttaactaagttacatgagt 55022891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 31097419 - 31097499
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga-aatgctaag 96  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  31097419 ttaggaaaggaactttaggtactactgagacctatttaagatattaactgagaactgtgaagcttttatgagaatgctaag 31097499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 7109804 - 7109722
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  7109804 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 7109722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 7113739 - 7113657
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  7113739 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 7113657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 14499431 - 14499349
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||| | |||||||||||||  |||||||||||||    
T  14499431 gaagttgttgaaaatgaattgatattaagctgttgataagatctgattatgcggttattgttatttaactaagttgcatgagt 14499349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 22336825 - 22336743
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  22336825 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 22336743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 27409647 - 27409729
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  27409647 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 27409729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 28949830 - 28949748
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  28949830 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 28949748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 11854842 - 11854757
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||| ||  |||||||||||||    
T  11854842 caagaagttattgaaaatgaattgatgttaagttgttgatatgatctgattatgctgctattgttattaaactaagttgcatgagt 11854757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 22321770 - 22321688
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||| ||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  22321770 gaagttgttgaaaatgaattggtattaagctattgatataatctgattatgctgctattgttatttaactaagttacatgagt 22321688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 14668634 - 14668567
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||    
T  14668634 ctgttgatgtgatctgattatgctgctattgttatttaactaagttgcatgagtctatataagatgat 14668567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 8489473 - 8489571
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  8489473 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 8489569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 15464969 - 15464871
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  15464969 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 15464873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 15849958 - 15850028
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaa 95  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| | |||||||| ||||||||||||||    
T  15849958 ggaactttaggtactaatgagacctatttaagatatttaatgagatcggtgaagcttttatgaaatgctaa 15850028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 19725949 - 19726018
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 252  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||   |||||||||||    
T  19725949 gctgttgatgtgatctgattatgctgctattgttatttaactaagttgcatgagtcattataagatgatg 19726018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 2897696 - 2897767
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||||||||| || |||| |||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  2897696 ggaactttaggtaatagtgaggcctatttaagatgttaactgttaactgtgaagctattatgaaatgctaag 2897767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 14665478 - 14665411
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||||||||||||  ||||||||||    
T  14665478 ctgttgatgtgatctgattatgttgctattgttatttaactaagttgcatgagtctatataagatgat 14665411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 15850095 - 15850183
Alignment:
Q  163 tgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||||||| |||||| ||  |||| ||||||||||||||||| ||||||||||||  |||||||||||| ||||||||| ||||||    
T  15850095 tgaaaatgaattgttattaaact--tgatatgatctgattatgctgcaattgttatttaactaagttgcatgagactgaataagttgatga 15850183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 5223168 - 5223070
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||| |||||| |||||||| ||||    
T  5223168 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgtatgagtatgaataagttgat 5223072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 12172872 - 12172806
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||    
T  12172872 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtctatataagatgat 12172806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 3402830 - 3402891
Alignment:
Q  27 aactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  3402830 aactttaggtagtaatgtgacctatttaagatgttaactgagacctgtgaagctattatgaa 3402891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 26190870 - 26190947
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatg 91  Q
    |||||||| | ||||||||||||| |||||||||||||||||||| |||||||| || |||||| ||||| |||||||    
T  26190870 tgattaggaatggaactttaggtagtaatgagacctatttaagatgttaactgaaaattgtgaacctattttgaaatg 26190947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 3389808 - 3389871
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||| |||||||||| |||||||    
T  3389808 ggaactttaggtagtaatgtgacctatttaagatgttaactgagacctgtgaagctgttatgaa 3389871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 11854969 - 11854898
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||||||||||||||||||||||| |||||| |||||||  || |||||||||||  ||||||||||||    
T  11854969 ggaactttaggtactaatgagacctatctaagatgttaactgttaattgtgaagctatattgaaatgctaag 11854898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 11854520 - 11854430
Alignment:
Q  153 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataag 246  Q
    |||| |||||||||| ||||||| |||||||||  ||||||||| ||||||||| || ||||||||||||  ||||||||||||| ||||||||    
T  11854520 aagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgccgcaattgttatttaactaagttgcatgagtatgaataag 11854430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 16797916 - 16797998
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| |||||||| ||||||||||||  ||||||| |||||||| |||||||| ||||||||| ||| |||||| ||||    
T  16797916 tgattaggaaaggaactataggtactaatggaacctattaaagatattgactgagaattgtgaagcttttacgaaatgttaag 16797998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 16808743 - 16808825
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| |||||||| ||||||||||||  ||||||| |||||||| |||||||| ||||||||| ||| |||||| ||||    
T  16808743 tgattaggaaaggaactataggtactaatggaacctattaaagatattgactgagaattgtgaagcttttacgaaatgttaag 16808825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 18383956 - 18384010
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  18383956 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 18384010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 30066192 - 30066111
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  30066192 gattaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 30066111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 3403003 - 3403050
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  3403003 tgtgatctgattatgctgctattgttatttaactaagttgcatgagtc 3403050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 11300384 - 11300455
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||||||||||||||||||||||| |||||| |||||||  || ||| |||||||  ||||||||||||    
T  11300384 ggaactttaggtactaatgagacctatctaagatgttaactgttaattgtaaagctatattgaaatgctaag 11300455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 11862862 - 11862815
Alignment:
Q  192 gtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||    
T  11862862 gtgatctgattatgctgctattgttatttaactaagttgcatgagtct 11862815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 12496335 - 12496280
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||| |||||||||||||||||||| |||||||||||  ||||||||||||||    
T  12496335 gctgttgttgtgatctgattatgctgcttttgttatttaactaagttgcatgagtc 12496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 38814625 - 38814554
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  38814625 ttaggaaaggaactttaggtactaatgcgacctattaaagataatgactgtgaactgtgaagtttttatgaa 38814554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 1982851 - 1982905
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| |||||||||||||||||||| |||||||||||  |||||||||||||||    
T  1982851 tgttgttgtgatctgattatgctgcttttgttatttaactaagttgcatgagtct 1982905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 4589228 - 4589294
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  4589228 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 4589294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 12339570 - 12339472
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||| ||  ||||| ||  |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  12339570 caagatgttgttgaaa-tgaattgttattaaact--tgatgagaattgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 12339474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 15878092 - 15878158
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||| |||||  ||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  15878092 tgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtcggtataagatgat 15878158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 17242213 - 17242151
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 79  Q
    ||||| |||||||||||||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  17242213 ttaggaaaggaactttaggtgctagtgagacctattagagatattgactgagaactgtgaagc 17242151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 19775419 - 19775353
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  19775419 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 19775353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 23053128 - 23053194
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||||||||| ||||||||||||||||||||||  | |||||||||||||  ||||||||||    
T  23053128 tgttgttgtgatctgcttatgctgctattgttatttaactatgttgcatgagtctatataagatgat 23053194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 11070314 - 11070233
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||   |||||||||||    
T  11070314 gattaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatatcgaaatgctaag 11070233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 55023113 - 55023032
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | |||||||||| |||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  55023113 gattaggaatggaactttagatactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 55023032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 322662 - 322614
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||||||||||||||| |||||||||||||||  |||||||||||||||    
T  322662 tgtgatctgattatgccgctattgttatttaactaagttgcatgagtct 322614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 3389983 - 3390030
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||||    
T  3389983 tgtgatctgattatgctgctgttgttatttaactaagttgcatgagtc 3390030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 3833915 - 3833844
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||||||||||||||||| |||||||| |||||  | |||| ||||||||||| | |||||||    
T  3833915 ttaggaaaggaactttaggtactaatgtgacctattaaagatgatgactgtgaactgtgaagtttttatgaa 3833844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 11165392 - 11165443
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactg 66  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| |||||||    
T  11165392 gattaggaatggaactttaggtactaatgagacctatctaagatgttaactg 11165443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 322846 - 322772
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||||||  ||| | ||||||| ||||| |||||||||||||| |||||| ||| |||||||||| |||||||    
T  322846 tgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactaagatctgtgaagctgttatgaa 322772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 242
Target Start/End: Original strand, 11300767 - 11300854
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 242  Q
    ||||| |||||||||| ||||||| |||||| | ||| ||||||| |||||||||| | ||||||||||||  ||||||||||||||||||    
T  11300767 caagatgttgttgaaa-tgaattgttattaaac-gtt-atgtgatttgattatgctacaattgttatttaactaagttgcatgagtctgaa 11300854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 12037993 - 12038058
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||||||||||||| |||||||||||  ||||||||||||| |  ||||||||||    
T  12037993 tgttgttgtgatctgattatgctgct-ttgttatttaactaagttgcatgagtttatataagatgat 12038058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 16696857 - 16696791
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| || ||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  16696857 ttgatgtgatttgtttatgctgcaattgttatttaactaagttgcatgattatgaataagttgatga 16696791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 16798055 - 16798154
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||||||||||||| ||| ||||||| |  ||||||||| |||||||| |||  |||||||| ||  | ||||||||||| |||||||| ||||    
T  16798055 caagaaattgttgaaaatgatttgttattaagtt--tgatgtgatttgattatgttgcacttgttattaaactatgttgcatgagtatgaataagttgat 16798152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 18383778 - 18383852
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||||||  ||| | ||||||| ||||| |||||||||||||| |||||||||| | |||||||| |||||||    
T  18383778 tgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgagatcagtgaagctgttatgaa 18383852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 23077518 - 23077584
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||  |||| |||| ||||||||||| ||||||||||||||||  ||||||||||    
T  23077518 tgttgttgtgatctgcctatgttgctgttgttatttaaccaagttgcatgagtctatataagatgat 23077584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 11298568 - 11298621
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||||||  |||||||||||||||||||||  ||||||||||||||    
T  11298568 tgttgttgtgatctgcctatgctgctattgttatttaactaagttgcatgagtc 11298621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 12511137 - 12511084
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||| |||||  |||||||||||||||||||||  ||||||||||||||    
T  12511137 tgttgatgtaatctgcctatgctgctattgttatttaactaagttgcatgagtc 12511084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 15051584 - 15051531
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| ||||| |||  ||||||||||||||||||||| |||||||||||||||    
T  15051584 tgttgttgtgaactgcctatgctgctattgttatttaaccaagttgcatgagtc 15051531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 15060360 - 15060307
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| ||||| |||  ||||||||||||||||||||| |||||||||||||||    
T  15060360 tgttgttgtgaactgcctatgctgctattgttatttaaccaagttgcatgagtc 15060307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 16909818 - 16909765
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| ||||| ||| ||||||| |||||||||||||| |||||||||||||||    
T  16909818 tgttgttgtgaactgcttatgctactattgttatttaaccaagttgcatgagtc 16909765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 46822345 - 46822292
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||| |||||  |||||||||||||||||||||  ||||||||||||||    
T  46822345 tgttgatgtaatctgcctatgctgctattgttatttaactaagttgcatgagtc 46822292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 11557425 - 11557477
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||| ||||||||||||||||||||  ||||||||||  |||||||||||||    
T  11557425 tgttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagt 11557477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 14499559 - 14499491
Alignment:
Q  27 aactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaa 95  Q
    ||||||||||| ||||||||||||| |||||| |||||||  |  |||||||||||  |||||||||||    
T  14499559 aactttaggtagtaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaa 14499491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 253
Target Start/End: Original strand, 16750604 - 16750689
Alignment:
Q  166 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||  |||| |||  |||||||||||| ||||||||||||  |||||||| || | |||||||| ||||||    
T  16750604 aaatgaattgttattaagct--tgatatgaattgattatgctgcaattgttatttaactaagttgcaagaatatgaataagttgatga 16750689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 17242071 - 17241990
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 242  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | ||||||||||||||||    
T  17242071 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaa 17241990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 23408506 - 23408438
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||| ||| |||||  |||| ||||||||||| |||| ||||||||||||||| | ||||||||||    
T  23408506 gctgttgttgtaatctgtctatgttgctattgttaattaaccaagttgcatgagtcagtataagatgat 23408438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 11595017 - 11595064
Alignment:
Q  31 ttaggtactaatgagacctatttaagatattaactgagaactgtgaag 78  Q
    ||||||| |||||| ||||||||||||| |||||||||| ||||||||    
T  11595017 ttaggtagtaatgaaacctatttaagatgttaactgagacctgtgaag 11595064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 11595186 - 11595233
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  11595186 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 11595233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 11851657 - 11851603
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| |||||||| |||||||| |||| |||||||||  |||||||||||||||    
T  11851657 tgttgttgtgatctaattatgctactatcgttatttaactaagttgcatgagtct 11851603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 12496512 - 12496446
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    |||||||||  ||| | ||||||| ||||| |||||||||||||| |||||||| | ||||||||||    
T  12496512 tgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagct 12496446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 11298390 - 11298443
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactga 67  Q
    |||||||||  ||| | ||||||| ||||| |||||||||||||||||||||||    
T  11298390 tgattagggttggacccttaggtagtaatgtgacctatttaagatattaactga 11298443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 16369476 - 16369423
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| ||||| |||  |||||||||||||||| |||| |||||||||||||||    
T  16369476 tgttgttgtgaactgcctatgctgctattgttacttaaccaagttgcatgagtc 16369423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Original strand, 14878574 - 14878610
Alignment:
Q  202 tatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||||||||||||||||||||  ||||||||||||||    
T  14878574 tatgctgctattgttatttaactaagttgcatgagtc 14878610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 15941912 - 15941985
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatg 234  Q
    ||||||||||||| ||| ||||||  |  ||||||||| |||||||||||| | ||||||||||  ||||||||||    
T  15941912 ttgttgaaaatgatttgttattaaatt--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatg 15941985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 152 - 248
Target Start/End: Original strand, 66415 - 66511
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  66415 caagaagttgttgaagatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 66511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 66277 - 66359
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  66277 tgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 66359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 152 - 248
Target Start/End: Complemental strand, 53671 - 53575
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  53671 caagaagttgttgaagatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 53575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 53809 - 53727
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53809 tgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 53727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 65838 - 65891
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||||| ||| |||||  ||||||||||||||||||||| ||||||||||||||    
T  65838 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagt 65891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 152 - 248
Target Start/End: Complemental strand, 17804303 - 17804207
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  17804303 caagaagttgttgaagatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 17804207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 17804441 - 17804359
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17804441 tgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 17804359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 22430030 - 22430131
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||||||||||| ||||||    
T  22430030 caagaaattgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctatagttaattaactaagttgcatgagtctgaatatgatgat 22430129  T
Q  252 ga 253  Q
    ||    
T  22430130 ga 22430131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 152 - 248
Target Start/End: Original strand, 25767168 - 25767264
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  25767168 caagaagttgttgaagatgaattgatattaagctgttggtgtgatctgattatgctgctattgttacttaactaagttgcatgagtctgaataagat 25767264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 25767030 - 25767112
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25767030 tgattaggaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaaactattatgaaatgctaag 25767112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 22863048 - 22862967
Alignment:
Q  156 aagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  22863048 aagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 22862967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 1644808 - 1644726
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||  |||||||||||||    
T  1644808 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgccattgttattaaactaagttgcatgagt 1644726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 8243964 - 8243882
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  8243964 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 8243882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 11566965 - 11566883
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  11566965 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 11566883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 14472373 - 14472292
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||  |||||||||||||    
T  14472373 gaagttgttgaaaatgaattgatattaagctgttgatatgatctaattatgctgctattgtta-ttaactaagttgcatgagt 14472292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 19870693 - 19870611
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  19870693 gaagttgttgaaaatgaattgataataagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 19870611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 23395171 - 23395089
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  23395171 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 23395089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 27415804 - 27415886
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||||  |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  27415804 tgattaggagaggaaccttaggtactaatgagacctatttaagatgttaactgagaactgtgaagctattgtgaaatgttaag 27415886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 18955764 - 18955848
Alignment:
Q  153 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| ||  |||||||||||||    
T  18955764 aagaagttattgaaaatgaattgatattaagttgttgatatgatccgattatgctgctattgttattaaactaagttgcatgagt 18955848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 12706926 - 12706851
Alignment:
Q  21 ggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||| ||||    
T  12706926 ggaagaaactttaggtactaatgagacctattaaagatattgactgagaactgtgaagcttttatgaaatgttaag 12706851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 18917269 - 18917351
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||  ||||||||| |||| | |||||||||||||||||||||||  |||||||||||||    
T  18917269 gaagttgttgaaaatgaattgatattgggctgttgatatgatataattatgctgctattgttatttaactaagttgcatgagt 18917351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 23990023 - 23989941
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  23990023 gaagttgttgaaaatgaattggtaataagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 23989941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 12706794 - 12706705
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||| ||| ||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||    
T  12706794 caagaaattgctgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaat 12706705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 23414749 - 23414651
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  23414749 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 23414653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 27556507 - 27556409
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  27556507 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 27556411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 27325650 - 27325714
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    ||||||||||||| |||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  27325650 ctgttgatgtgatatgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 27325714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 16741447 - 16741368
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| || ||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||| |||||||||| ||||    
T  16741447 ttaggaaatgaactttaggtactagtgagacctattaaagatattgactgagaattgtgaagcttttatgaaatgttaag 16741368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 5616816 - 5616915
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||||||| ||| ||||| ||| |||||| ||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  5616816 caagaagttgctgagaatgatttgttattaaact--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 5616913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 22429892 - 22429974
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| | ||||||||||||  |  ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  22429892 tgattaggaatggaactttaggttatggtgagacctatttaagatgttagctgagaactgtgaagttattatgaaatgctaag 22429974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 237
Target Start/End: Original strand, 12618850 - 12618929
Alignment:
Q  157 agttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||| ||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  12618850 agttgttgaaa-tgaattggtatcaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 12618929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 18955636 - 18955707
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||||||||||||||||||||||| |||||| |||||||  || |||||||||||  ||||||||||||    
T  18955636 ggaactttaggtactaatgagacctatataagatgttaactgttaattgtgaagctatattgaaatgctaag 18955707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 14472513 - 14472432
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  14472513 gattaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 14472432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 16523425 - 16523478
Alignment:
Q  186 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  16523425 gttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 16523478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 18180570 - 18180517
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  18180570 tgttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtc 18180517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 18907189 - 18907133
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||||| ||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  18907189 gctgttgttgtgatctgattatgctgctattgttatttaactaagctgcatgagtct 18907133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 1587596 - 1587659
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    ||||| |||||||||||||| ||||||||||||| | | |||||| ||||||||||||||||||    
T  1587596 ttaggaaaggaactttaggtgctaatgagacctaataatgatattgactgagaactgtgaagct 1587659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 19873197 - 19873130
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||| |||||  ||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  19873197 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtcggtataagatgat 19873130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 1644359 - 1644293
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  1644359 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 1644293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 21702359 - 21702293
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| ||||| |||||| ||||||||||||| ||||||||||| | |||||||| ||||||    
T  21702359 ttgatgtgatttgattttgctgcaattgttatttaattaagttgcatgattatgaataagttgatga 21702293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 31478265 - 31478331
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  31478265 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 31478331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 19863037 - 19862988
Alignment:
Q  202 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  19863037 tatgctgctattgttatttaaccaagttgcatgagtcggtataagatgat 19862988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 22592669 - 22592730
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 78  Q
    ||||| ||| ||||||||||||||||| |||||||| |||||| |||||| |||||||||||    
T  22592669 ttaggaaagaaactttaggtactaatgtgacctattaaagataataactgtgaactgtgaag 22592730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 22863189 - 22863108
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| |||||||  |  ||||||||| |  ||||||||||||    
T  22863189 gattaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctgtattgaaatgctaag 22863108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 12496549 - 12496486
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    ||||| ||||||||||||||| | |||||||||||| |||||| | |||| |||||||||||||    
T  12496549 ttaggaaaggaactttaggtagttatgagacctattaaagataatgactgtgaactgtgaagct 12496486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 15041589 - 15041656
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatga 250  Q
    ||||||| |||||||||  |||||| ||||||||||||||  |||||||||||||||  |||||||||    
T  15041589 gctgttgttgtgatctgcctatgctactattgttatttaactaagttgcatgagtctttataagatga 15041656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 19790826 - 19790873
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||||    
T  19790826 tgtgatctgattatgctgctgttgttatttaactaagttgcatgagtc 19790873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 19848034 - 19848089
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||| |||||  |||||||||||||||||||||  ||||||||||||||    
T  19848034 gctgttgatgtaatctgcctatgctgctattgttatttaactaagttgcatgagtc 19848089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 20803418 - 20803489
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| || ||||||||||| ||||||||||||| | | |||||| ||| |||||||||||||| |||||||    
T  20803418 ttaggaaaagaactttaggtgctaatgagacctaataatgatattgacttagaactgtgaagcttttatgaa 20803489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 2685184 - 2685246
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 79  Q
    ||||| |||||||| ||||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  2685184 ttaggaaaggaactctaggtgctagtgagacctattagagatattgactgagaactgtgaagc 2685246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 15894479 - 15894545
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||||||||| ||||||||||||||||||||||  | | |||||||||||  ||||||||||    
T  15894479 tgttgttgtgatctgcttatgctgctattgttatttaactatgatgcatgagtctatataagatgat 15894545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 16523264 - 16523330
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    |||||||||  ||| | ||||||| ||||| |||||||||||||| |||||||||| ||||||||||    
T  16523264 tgattagggttggatccttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagct 16523330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 20908022 - 20908076
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||||||||  ||||||||||  |||||||||||||||    
T  20908022 tgttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagtct 20908076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 27553612 - 27553666
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| |||||||||||||||||||| ||||| |||||  |||||||||||||||    
T  27553612 tgttgttgtgatctgattatgctgctgttgttctttaactaagttgcatgagtct 27553666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 1587766 - 1587831
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||    
T  1587766 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgaatatgaataagttgatga 1587831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 22408345 - 22408398
Alignment:
Q  186 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||| |||||||||||||| ||||| ||||||||||| ||||||||| ||||||    
T  22408345 gttgttgtgatctgattatactgcttttgttatttaaccaagttgcacgagtct 22408398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 22432308 - 22432259
Alignment:
Q  202 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||||||||||||| |||| ||||||||||||||| | ||||||||||    
T  22432308 tatgctgctattgttaattaaccaagttgcatgagtcggtataagatgat 22432259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 22438858 - 22438809
Alignment:
Q  202 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||||||||||||| |||| ||||||||||||||| | ||||||||||    
T  22438858 tatgctgctattgttaattaaccaagttgcatgagtcggtataagatgat 22438809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 2685326 - 2685407
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 242  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | ||||||||||||||||    
T  2685326 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaa 2685407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 19662868 - 19662787
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 242  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | ||||||||||||||||    
T  19662868 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaa 19662787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 9482158 - 9482229
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||||||||||||||||| || ||||| |||||| | ||||  |||||||||| | |||||||    
T  9482158 ttaggaaaggaactttaggtactaatgtgaactattaaagataatgactgtaaactgtgaagtttttatgaa 9482229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 19790657 - 19790704
Alignment:
Q  31 ttaggtactaatgagacctatttaagatattaactgagaactgtgaag 78  Q
    ||||||| |||||| ||||||||||||| |||||||||| ||||||||    
T  19790657 ttaggtagtaatgaaacctatttaagatgttaactgagacctgtgaag 19790704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 23992509 - 23992454
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||| |||||  ||||||||||||||||||||   ||||||||||||||    
T  23992509 gctgttgatgtaatctgcctatgctgctattgttatttagctaagttgcatgagtc 23992454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 25642227 - 25642294
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||| |||||  ||||||||||||||||||||| | |||||||||||||   ||||||||||    
T  25642227 ctgttgttgtaatctgtctatgctgctattgttatttaacctagttgcatgagtcgatataagatgat 25642294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 27416232 - 27416287
Alignment:
Q  198 tgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||||| ||||||||||||  ||||||||||||| |||||| | ||||||    
T  27416232 tgattatgctgcaattgttatttaactaagttgcatgagtatgaatatgttgatga 27416287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 253
Target Start/End: Complemental strand, 12496376 - 12496314
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||||||||||||| | ||||||||||  ||||||||||  | |||||||| ||||||    
T  12496376 tgtgatctgattatgctgcaaatgttatttaactaagttgcatgtctatgaataagctgatga 12496314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 18907366 - 18907292
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||||||| ||| | ||||||| ||||| |||||||||||||| |||||||  |  ||||||||| |||||||    
T  18907366 tgattagggatggacccttaggtagtaatgtgacctatttaagatgttaactgcaatatgtgaagctgttatgaa 18907292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 19663009 - 19662948
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 79  Q
    ||||| ||||||||| |||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  19663009 ttaggaaaggaactt-aggtgctagtgagacctattggagatattgactgagaactgtgaagc 19662948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 25135706 - 25135772
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||| ||||||| | |||||||||||  |||||||||| | |||||||| ||||||    
T  25135706 ttgatgtgatttgataatgctgcaaatgttatttaattgagttgcatgattatgaataagttgatga 25135772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 20803589 - 20803654
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||||||| ||  ||| ||||||| | |||||||| ||||||    
T  20803589 tgatgtgatttgattatgctgcaattgttattaaactaagctgcatgaatatgaataagttgatga 20803654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 21766771 - 21766718
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||||||  |||| ||||||||||||||||  ||||||||||||||    
T  21766771 tgttgttgtgatctgcctatgttgctattgttatttaactaagttgcatgagtc 21766718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 22334955 - 22335004
Alignment:
Q  202 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||||||||||||||||| | |||||||||||||   ||||||||||    
T  22334955 tatgctgctattgttatttaacctagttgcatgagtcgatataagatgat 22335004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 23657468 - 23657513
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgag 236  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||    
T  23657468 tgtgatctgattatgctgctgctgttatttaactaagttgcatgag 23657513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 253
Target Start/End: Complemental strand, 16624222 - 16624137
Alignment:
Q  166 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| ||||||| |  |||| |||  |||||||||||| ||||||||||||  |||||||| || | |||||||| ||||||    
T  16624222 aaatgaattgttattaagtt--tgatatgaattgattatgctgcaattgttatttaactaagttgcaagaatatgaataagttgatga 16624137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 20907854 - 20907894
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaact 65  Q
    ||||||||||||| |||||| ||||||||||||| ||||||    
T  20907854 ggaactttaggtagtaatgaaacctatttaagatgttaact 20907894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 27567656 - 27567704
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||||||||||||||||||  ||||||||||  |||||| ||||||||    
T  27567656 tgtgatctgattatgctgctgctgttatttaactaagttgtatgagtct 27567704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 152 - 248
Target Start/End: Complemental strand, 24735509 - 24735413
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  24735509 caagaagttgttgaagatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 24735413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 19688618 - 19688700
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19688618 tgattaggaaatgaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 19688700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 24735647 - 24735565
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24735647 tgattaagaaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 24735565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 10101648 - 10101730
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  10101648 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 10101730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 24649460 - 24649378
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  24649460 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 24649378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 12901515 - 12901597
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||  |||||||||||||    
T  12901515 gaagttgttgaaaatgaattgatattaagctgttgatatgatccgattatgctgttattgttatttaactaagttgcatgagt 12901597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 27379436 - 27379518
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  |||||||||||||    
T  27379436 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttgcatgagt 27379518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 27383482 - 27383564
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  |||||||||||||    
T  27383482 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttgcatgagt 27383564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 27601899 - 27601817
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  27601899 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 27601817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 24628482 - 24628564
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| |||||||||||| || | ||||||||||||||||||||||||||||  ||||| |||||||    
T  24628482 gaagttgttgaaaatgaattggtattaagctgttaatataatctgattatgctgctattgttatttaactaagttacatgagt 24628564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 252
Target Start/End: Complemental strand, 37524751 - 37524684
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 252  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||  | |||||||||    
T  37524751 tgttgatgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtctatacaagatgatg 37524684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 31344981 - 31344883
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||| ||||||||  ||||||||||||| |||||||| ||||    
T  31344981 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattattatttaactaagttgcatgagtatgaataagttgat 31344885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 24716569 - 24716622
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  24716569 tgttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtc 24716622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 10101509 - 10101589
Alignment:
Q  16 attagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||| | ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  10101509 attaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 10101589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 21318683 - 21318731
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  21318683 tgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtct 21318731  T

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Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 21327614 - 21327662
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  21327614 tgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtct 21327662  T

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Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 19928367 - 19928438
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  19928367 ttaggaaaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 19928438  T

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Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 27263514 - 27263451
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    ||||| |||||||||||||| ||||||||||||| | | |||||| ||||||||||||||||||    
T  27263514 ttaggaaaggaactttaggtgctaatgagacctaataatgatattgactgagaactgtgaagct 27263451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 18855326 - 18855396
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 87  Q
    ||||| |||||||||||||| ||| |||||||||||  ||||| | |||||||||||||||||| ||||||    
T  18855326 ttaggaaaggaactttaggtgctagtgagacctattagagataatgactgagaactgtgaagcttttatga 18855396  T

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Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 22811952 - 22812006
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| |||||| |||||||||||||||||||||||||  |||||||||||||||    
T  22811952 tgttgttgtgatttgattatgctgctattgttatttaactaagttgcatgagtct 22812006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 23187316 - 23187246
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 87  Q
    ||||| ||||||  |||||||||||||||||||||| |||||| | |||| ||||||||||||| ||||||    
T  23187316 ttaggaaaggaatcttaggtactaatgagacctattaaagataatgactgtgaactgtgaagcttttatga 23187246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 23598579 - 23598509
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 87  Q
    ||||| ||||||  |||||||||||||||||||||| |||||| | |||| ||||||||||||| ||||||    
T  23598579 ttaggaaaggaatcttaggtactaatgagacctattaaagataatgactgtgaactgtgaagcttttatga 23598509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 41667021 - 41666955
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  41667021 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatga 41666955  T

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Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 25961575 - 25961628
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||||||||||||||||| |||||||||||  ||||||||||||||    
T  25961575 tgttgttgtgatctgattatgctgctgttgttatttaactaagttgcatgagtc 25961628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 24673639 - 24673579
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||||| || ||||||||||||||||||| || |||||||||||||| | ||||||||    
T  24673639 tgtgatctgcttgtgctgctattgttatttaaccatgttgcatgagtctgtacaagatgat 24673579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 24869950 - 24869902
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||||    
T  24869950 tgtgatctgattatgctgctgttgttatttaactaagttgcatgagtct 24869902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 61056 - 60993
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    ||||| |||||||||||||| ||||||||||||| | | |||||| || |||||||||||||||    
T  61056 ttaggaaaggaactttaggtgctaatgagacctaataatgatattgaccgagaactgtgaagct 60993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 40428708 - 40428645
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||||  |||| ||||| |||||||||||||| |||||||||| |||||||||| |||||||    
T  40428708 ggaacttagggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaa 40428645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 24174876 - 24174822
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||||||||  ||||||||||  |||||||||||||||    
T  24174876 tgttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagtct 24174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 24716392 - 24716454
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtga 76  Q
    |||||||| | ||||||||||||| || ||||||||||||||||| |||||||| | ||||||    
T  24716392 tgattaggaatggaactttaggtagtagtgagacctatttaagatgttaactgaaacctgtga 24716454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 22799167 - 22799220
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||||||  |||||||||||||||||||||  ||||||||||||||    
T  22799167 tgttgttgtgatctgcctatgctgctattgttatttaactaagttgcatgagtc 22799220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 23187146 - 23187081
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||| |||| |||||||||||| ||||||||| || |||||| ||||||| |||||||| ||||||    
T  23187146 tgatatgatttgattatgctgcaattgttattaaaccaagttccatgagtatgaataagttgatga 23187081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 23598409 - 23598344
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||| |||| |||||||||||| ||||||||| || |||||| ||||||| |||||||| ||||||    
T  23598409 tgatatgatttgattatgctgcaattgttattaaaccaagttccatgagtatgaataagttgatga 23598344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 27263343 - 27263278
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||    
T  27263343 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgaatatgaataagttgatga 27263278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 22461196 - 22461277
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 242  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | ||||||||||||||||    
T  22461196 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaa 22461277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 24680258 - 24680198
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||||| || ||||||||||||||||||| || ||||| |||||||| | ||||||||    
T  24680258 tgtgatctgcttgtgctgctattgttatttaaccatgttgcttgagtctgtacaagatgat 24680198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 25963749 - 25963809
Alignment:
Q  178 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||| ||||||| |||||||||  |||||||||||||||||| ||  ||||||||||||||    
T  25963749 attatgctgttgttgtgatctgcctatgctgctattgttattgaactaagttgcatgagtc 25963809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 22741004 - 22741071
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||| |||||  ||||||||||||||||||||| | |||||||||||||   ||||||||||    
T  22741004 ctgttgttgtaatctgtctatgctgctattgttatttaacctagttgcatgagtcgatataagatgat 22741071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 22758759 - 22758826
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||| |||||  ||||||||||||||||||||| | |||||||||||||   ||||||||||    
T  22758759 ctgttgttgtaatctgtctatgctgctattgttatttaaactagttgcatgagtcgatataagatgat 22758826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 25616267 - 25616212
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||| |||||  |||||||||||||| ||||||  ||||||||||||||    
T  25616267 gctgttgatgtaatctgcctatgctgctattgtaatttaactaagttgcatgagtc 25616212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 22461055 - 22461116
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 79  Q
    ||||| ||||||||| |||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  22461055 ttaggaaaggaactt-aggtgctagtgagacctattggagatattgactgagaactgtgaagc 22461116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 23038108 - 23038054
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||||| ||| |||||  ||||||||||||||||||||| |||| ||||||||||    
T  23038108 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagctgcatgagtc 23038054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 24655379 - 24655433
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||| ||||  ||||||||||  |||||||||||||||    
T  24655379 tgttgttgtgatctgattatgttgctgctgttatttaactaagttgcatgagtct 24655433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 40622251 - 40622317
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||| |||||  |||||||||||||||||| || |||||||||||||||   ||||||||||    
T  40622251 tgttgttgtaatctgcctatgctgctattgttattcaaccaagttgcatgagtcgatataagatgat 40622317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 21918194 - 21918243
Alignment:
Q  31 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    ||||||| ||||| |||||||||||||| |||||||| | ||||||||||    
T  21918194 ttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagct 21918243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 18855468 - 18855541
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatg 234  Q
    ||||||| ||||| ||| |||||||||  ||||||||| |||||||||||| | |||| |||||  ||||||||||    
T  18855468 ttgttgagaatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttgtttaactaagttgcatg 18855541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 21916145 - 21916193
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||||||||||||| || | |||||||||||  |||||||||||||||    
T  21916145 tgtgatctgattatgttgtttttgttatttaactaagttgcatgagtct 21916193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 22634422 - 22634523
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||||| ||||    
T  22634422 caagaaattgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgcgtctgaataagttgat 22634521  T
Q  252 ga 253  Q
    ||    
T  22634522 ga 22634523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 155 - 248
Target Start/End: Original strand, 36133965 - 36134058
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  36133965 gaagttgttgaagatgaatggatattaagctgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 36134058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 9556633 - 9556551
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  9556633 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 9556551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 17810375 - 17810293
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  17810375 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 17810293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 36133824 - 36133906
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36133824 tgattaggaaagaaactttaggtattaatgagacctatttaagatattaactgggaactgtgaagctattatgaaatgctaag 36133906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 4561337 - 4561419
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  4561337 gaagttgttgaaaataaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 4561419  T

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Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 14757425 - 14757507
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  14757425 gaagttgttgaaaatgaattgatattaagttgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 14757507  T

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Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 1951626 - 1951699
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaat 90  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  1951626 ttaggaaaggaactttaggtactaatgagacctaataaagatattaactgagaactgtgaagcttttatgaaat 1951699  T

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Target: chr4; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 1951762 - 1951851
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||| ||||||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||    
T  1951762 caagaaattgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaat 1951851  T

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Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 27534131 - 27534047
Alignment:
Q  153 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||||||| |||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||| ||  |||||||||||||    
T  27534131 aagaagttattgaaaatgaattgatattaagctgttgatatgatccgattatgctgttattgttattaaactaagttgcatgagt 27534047  T

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Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 43256023 - 43256105
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||||  |||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| ||||    
T  43256023 tgattaggagaggaaccttaggtactaatgagacctatttaagatgttaactgggaactgtgaagctattgtgaaatgttaag 43256105  T

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Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 18222386 - 18222468
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    ||||||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||    
T  18222386 ttgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaat 18222468  T

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Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 5756941 - 5757023
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||| ||||||| | |||||||||||||| |||||||||||||  ||||| |||||||    
T  5756941 gaagttgttgaaaatgaattggtattaagttgttgatataatctgattatgctgttattgttatttaactaagttacatgagt 5757023  T

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Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 17152352 - 17152431
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||||||||||||||||  |||||||||||||| |||||||| |||||||||||||||| | |||||| ||| ||||    
T  17152352 ttagggaaggaactttaggtgttaatgagacctattaaagatattgactgagaactgtgaagattttatgatatgttaag 17152431  T

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Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 18222243 - 18222322
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| |||||||||||||| ||||||||||||||| |||||| | |||||||||||||||||| |||||| ||| ||||    
T  18222243 ttaggaaaggaactttaggtgctaatgagacctattaaagataatgactgagaactgtgaagcttttatgatatgttaag 18222322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 43256414 - 43256512
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||| | ||||||||||||  ||||||||||||| |||||||| ||||    
T  43256414 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctacaattgttatttaactaagttgcatgagtatgaataagttgat 43256510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 33742478 - 33742399
Alignment:
Q  157 agttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||| ||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  33742478 agttgttgaaa-tgaattggtatcaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 33742399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 18228718 - 18228781
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    ||||| |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||||    
T  18228718 ttaggaaaggaactttaggtgctaatgagacctattaaagataatgactgagaactgtgaagct 18228781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 9530674 - 9530604
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 87  Q
    ||||| ||||||| |||||||||||||||||||||| |||||| | || ||||||||||||||| ||||||    
T  9530674 ttaggaaaggaaccttaggtactaatgagacctattaaagataatgaccgagaactgtgaagcttttatga 9530604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 17152501 - 17152576
Alignment:
Q  166 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||||||| |||||||||  ||||||||| |||||||||||| | ||||||||||  |||||||||||||||||||    
T  17152501 aaatgaattgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgagtctgaat 17152576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 3412869 - 3412804
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||||||||||||| ||  ||||||||||||| |||||||| ||||||    
T  3412869 tgatgtgatttgattatgctgctattgttattaaactaagttgcatgagtatgaataagttgatga 3412804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 14757285 - 14757366
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  14757285 gattaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 14757366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 18228861 - 18228943
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||| |||||||||| ||| |||||  ||||||||| |||||||||||| ||| ||||||||  |||||||||||||||||||    
T  18228861 ttgttggaaatgaattgttatgaagct--tgatgtgatttgattatgctgcaatttttatttaactaagttgcatgagtctgaat 18228943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 18236962 - 18236897
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||||    
T  18236962 tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgatga 18236897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 20157501 - 20157554
Alignment:
Q  186 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||||||||||||||||||||||||||||||||||||  || ||||||||||||    
T  20157501 gttgatgtgatctgattatgctgctattgttatttaactaatttgcatgagtct 20157554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 16488124 - 16488172
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  16488124 tgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 16488172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 16243265 - 16243336
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  16243265 ttaggaaaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 16243336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 19757466 - 19757537
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  19757466 ttaggaaaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 19757537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 19782340 - 19782269
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  19782340 ttaggaaaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 19782269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 26243530 - 26243601
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| |||||||||||||| ||| |||||||||||  ||||||| |||||||||||||||||  |||||||    
T  26243530 ttaggaaaggaactttaggtgctagtgagacctattagagatattgactgagaactgtgaagcctttatgaa 26243601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 28569477 - 28569544
Alignment:
Q  186 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  28569477 gttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatga 28569544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 14708668 - 14708734
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  14708668 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatga 14708734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 23139511 - 23139449
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 79  Q
    ||||| |||||||||||||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  23139511 ttaggaaaggaactttaggtgctagtgagacctattagagatattgactgagaactgtgaagc 23139449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 26243666 - 26243765
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||||||| ||||| ||| |||||||||  ||||||||| |||||||||||| | ||||||||||  ||||||||||  | |||||||| ||||    
T  26243666 caagaaattgttgagaatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtttatgaataagctgat 26243763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 27534258 - 27534188
Alignment:
Q  26 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||||||||||||||||||||| | |||| |||||||  || |||||||||||  ||||||||||||    
T  27534258 gaactttaggtactaatgagacctatctgagatgttaactgttaattgtgaagctatattgaaatgctaag 27534188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 17810515 - 17810434
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||| ||||    
T  17810515 gattaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgttaag 17810434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 3413030 - 3412975
Alignment:
Q  24 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    |||||| |||||||||||||||||||||| |||||||| | ||||||||||||||||    
T  3413030 aggaaccttaggtactaatgagacctattaaagatattga-tgagaactgtgaagct 3412975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 13813069 - 13813113
Alignment:
Q  195 atctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||||||||||||||||||||||||||  |||||||||||||||    
T  13813069 atctgattatgctgctattgttatttaactaagttgcatgagtct 13813113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 16348697 - 16348757
Alignment:
Q  178 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||| ||||||| |||||||||  |||||||||||||||||||||  ||||||||||||||    
T  16348697 attatgctgttgttgtgatctgcctatgctgctattgttatttaactaagttgcatgagtc 16348757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 16356985 - 16357045
Alignment:
Q  178 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||| ||||||| |||||||||  |||||||||||||||||||||  ||||||||||||||    
T  16356985 attatgctgttgttgtgatctgcctatgctgctattgttatttaactaagttgcatgagtc 16357045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 23139369 - 23139277
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||| ||||| ||| |||||||||  ||||||||| |||||||||||| | ||||||||||  ||||||||||  | |||||||| ||||||    
T  23139369 ttgttgagaatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtttatgaataagctgatga 23139277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 12570090 - 12570024
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||||||||| ||||||||||||||||||||||  | | |||||||||||  ||||||||||    
T  12570090 tgttgttgtgatctgcttatgctgctattgttatttaactatgatgcatgagtctatataagatgat 12570024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 15224866 - 15224800
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||| || | |||||||| ||||||    
T  15224866 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcaagaatatgaataagttgatga 15224800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 16243401 - 16243500
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||||||| ||||| ||| |||||| |   ||||||||| |||||||||||| | ||||||||||  |||||||||| || |||||||| ||||    
T  16243401 caagaaattgttgagaatgatttgttattaaacc--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtgtatgaataagctgat 16243498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 2014849 - 2014784
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| | ||||||||||  |||||||||| || |||||||| ||||||    
T  2014849 tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtgtatgaataagctgatga 2014784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 2015019 - 2014948
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| || |||||||||||||||| | |||||||| |||||| | |||| ||||||||||| | |||||||    
T  2015019 ttaggaaatgaactttaggtactaaggtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 2014948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 25555550 - 25555503
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  25555550 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 25555503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 15353348 - 15353402
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||| ||||  ||||||||||  |||||||||||||||    
T  15353348 tgttgctgtgatctgattatgttgctgctgttatttaactaagttgcatgagtct 15353402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 16348526 - 16348592
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    |||||||||  ||| | ||||||| ||||| |||||||||||||| |||||||| | ||||||||||    
T  16348526 tgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagct 16348592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 16356814 - 16356880
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    |||||||||  ||| | ||||||| ||||| |||||||||||||| |||||||| | ||||||||||    
T  16356814 tgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagct 16356880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 16487939 - 16488013
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| |||| ||| | ||||||| ||||| | |||||||||||| |||| ||||| ||||||||||| ||||||    
T  16487939 tgatttgggatggacccttaggtagtaatgtgtcctatttaagatgttaattgagatctgtgaagctactatgaa 16488013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 18602624 - 18602674
Alignment:
Q  31 ttaggtactaatgagacctatttaaga-tattaactgagaactgtgaagct 80  Q
    |||||||||||| ||||||||| |||| |||| ||||||||||||||||||    
T  18602624 ttaggtactaataagacctattaaagaatattgactgagaactgtgaagct 18602674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 18609218 - 18609268
Alignment:
Q  31 ttaggtactaatgagacctatttaaga-tattaactgagaactgtgaagct 80  Q
    |||||||||||| ||||||||| |||| |||| ||||||||||||||||||    
T  18609218 ttaggtactaataagacctattaaagaatattgactgagaactgtgaagct 18609268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 42997484 - 42997550
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| | ||||||||||   |||||||||| | |||||||| ||||||    
T  42997484 ttgatgtgatttgattatgctgcaaatgttatttaactgagttgcatgattatgaataagttgatga 42997550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 45938246 - 45938185
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaa 222  Q
    ||||||| ||||| ||| |||||||||  ||||||||| |||||||||||| | ||||||||||    
T  45938246 ttgttgagaatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaa 45938185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 74; Significance: 5e-34; HSPs: 5)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 13010 - 12909
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||||||||| ||||    
T  13010 caagaaattgttgaagatgaattgatattaagctgttgatgtgatctgattatgctcctattgttaattaactaagttgcatgagtctgaataagttgat 12911  T
Q  252 ga 253  Q
    ||    
T  12910 ga 12909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 19294 - 19193
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||||||||| ||||    
T  19294 caagaaattgttgaagatgaattgatattaagctgttgatgtgatctgattatgctcctattgttaattaactaagttgcatgagtctgaataagttgat 19195  T
Q  252 ga 253  Q
    ||    
T  19194 ga 19193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 13148 - 13066
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13148 tgattaggaaatgaactttaggtactaatgagacctatttaagatattaactgagaactgtggagctattatgaaatgctaag 13066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 19432 - 19350
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| || ||||||| |||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19432 tgattaggaaatgaactttcggtactaatgagatatatttaagatattaactgagaactgtggagctattatgaaatgctaag 19350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 62331 - 62266
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  62331 tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatga 62266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 74; Significance: 5e-34; HSPs: 6)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 65528 - 65613
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  65528 caagaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 65613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 61615 - 61697
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  61615 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 61697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 80366 - 80300
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  80366 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 80300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 80955 - 80874
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| |||||||  |  ||||||||| |  ||||||||||||    
T  80955 gattaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctgtattgaaatgctaag 80874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 12839 - 12773
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||  ||||||| |||||||||| ||  |||||||||||||||  ||||||||||    
T  12839 tgttgttgtgatctgcctatgctgttattgttattgaactaagttgcatgagtctatataagatgat 12773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 80805 - 80736
Alignment:
Q  166 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||||||||| |||||||||  |||| |||  |||||||||||| ||||||||| ||  |||||||||||||    
T  80805 aaatgaattgttattaagct--tgatatgaattgattatgctgcaattgttattaaactaagttgcatgagt 80736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 23535588 - 23535688
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  23535588 caagaaattgttgaaa-tgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagtctgaataagttgat 23535686  T
Q  252 ga 253  Q
    ||    
T  23535687 ga 23535688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 152 - 248
Target Start/End: Complemental strand, 17410546 - 17410450
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  17410546 caagaagttgtcgaagatgaattgatattaagttgttgatgtgatctgattatgctgctattgttaattaactaagttgcatgagtctgaataagat 17410450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 15236783 - 15236865
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  15236783 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 15236865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 19472723 - 19472805
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  19472723 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 19472805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 20295950 - 20295868
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  20295950 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 20295868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 23535451 - 23535533
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||    
T  23535451 tgattaggaaaggaaccttaggtactaatgagacctgtttaagatattaaatgagaactgtgaagcttctatgaaatgctaag 23535533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 18356571 - 18356489
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||||  |||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  18356571 tgattaggagaggaaccttagatactaatgagacctatttaagatgttaactgagaactgtgaagctattgtgaaatgttaag 18356489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 243
Target Start/End: Complemental strand, 42805518 - 42805436
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    ||||||||||||||||| |||||||||  ||||||||| |||||||||||| | |||||||||| ||||||||||||||||||||    
T  42805518 ttgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaaccaagttgcatgagtctgaat 42805436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 18774445 - 18774374
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||||||    
T  18774445 ttaggaaaggaactttaggtgctaatgagacctattaaagatattacctgagaactgtgaagcttttatgaa 18774374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 20910662 - 20910744
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||||  ||||||  ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  20910662 tgattaggagaggaaccctaggtactaatgagacctatttaagatgttatctgaggactgtgaagctattgtgaaatgctaag 20910744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 20911172 - 20911270
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  20911172 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 20911268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 20232790 - 20232729
Alignment:
Q  18 tagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 79  Q
    |||| ||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  20232790 taggaaagaaactttaggtactaataagacctatttaagatattgactgagaactgtgaagc 20232729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 17718311 - 17718375
Alignment:
Q  24 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||| | |||||||    
T  17718311 aggaactttaggtactaatgagacctattaaagatattgactgtgaactgtgaagtttttatgaa 17718375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 18774308 - 18774219
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||| ||||||||||||| ||| |||||||||  ||||||||| |||||||||||| ||||||||| ||  | |||||||||||||||||    
T  18774308 caagaaattgttgaaaatgatttgttattaagct--tgatgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaat 18774219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 18784150 - 18784062
Alignment:
Q  153 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    ||||| ||||||||||||| ||| |||||||||  ||||||||| |||||||||||| ||||||||| ||  | |||||||||||||||||    
T  18784150 aagaaattgttgaaaatgatttgttattaagct--tgatgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaat 18784062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 18784288 - 18784217
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| |||||||||||||| ||||||||||| ||| |||||||| |||||||||||||| ||| |||||||    
T  18784288 ttaggaaaggaactttaggtgctaatgagaccaattaaagatattgactgagaactgtgaggcttttatgaa 18784217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 42805661 - 42805582
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| |||||||||||||| | | ||||||||||| |||||||| |||||||||||||||||| |||||| ||| ||||    
T  42805661 ttaggaaaggaactttaggtgccattgagacctattaaagatattgactgagaactgtgaagcttttatgatatgttaag 42805582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 18356061 - 18355963
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||| ||  ||||||||| |||||||| ||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  18356061 caagatgttgttgaaa-tgaattgttattaaact--tgatgtgatttgattatgttgcaattgttatttaactaagttgcatgagtatgaataagttgat 18355965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 21366705 - 21366759
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  21366705 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 21366759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 26742611 - 26742681
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 87  Q
    ||||| |||||||||||||| | | ||||||||||| |||||||| |||||||||||||||||| ||||||    
T  26742611 ttaggaaaggaactttaggtgccattgagacctattaaagatattgactgagaactgtgaagcttttatga 26742681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 1859017 - 1859070
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  1859017 tgttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtc 1859070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 17410691 - 17410646
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagata 59  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  17410691 tgattaggaaaggaactttaggtactaatgagacctatttaagata 17410646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 23451424 - 23451371
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  23451424 tgttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtc 23451371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 40723607 - 40723672
Alignment:
Q  172 attgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||||||| ||  |||||||||||||    
T  40723607 attgatattaagttgttgatatgatccgattatgctgctattgttattaaactaagttgcatgagt 40723672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 24767588 - 24767652
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| | |||  ||||||||||    
T  24767588 ttgatgtgatctgattatgctgctattgttatttaactaagttgcataaatctatataagatgat 24767652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 33409469 - 33409398
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  33409469 ttaggaaaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 33409398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 21885223 - 21885289
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  21885223 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatga 21885289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 23458668 - 23458615
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| ||||||||||||||||| || ||||||||||| |||||||||||||||    
T  23458668 tgttgttgtgatctgattatgcttcttttgttatttaaccaagttgcatgagtc 23458615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 23462929 - 23462876
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| ||||||||||||||||| || ||||||||||| |||||||||||||||    
T  23462929 tgttgttgtgatctgattatgcttcttttgttatttaaccaagttgcatgagtc 23462876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 20232649 - 20232568
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 242  Q
    ||||||| ||||||||| |||||||||  ||||||||| |||||||||||| ||||||||| ||  | ||||||| ||||||||    
T  20232649 ttgttgagaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttattaaactatgttgcataagtctgaa 20232568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 242
Target Start/End: Original strand, 21340782 - 21340855
Alignment:
Q  167 aatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 242  Q
    ||||| ||| |||||||||  ||||||||| |||||||||||| | ||||||||||  ||||||||||||||||||    
T  21340782 aatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgagtctgaa 21340855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 26680652 - 26680604
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||||    
T  26680652 tgtgatctgattatgctgctgttgttatttaactaagttgcatgagtct 26680604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 26742754 - 26742835
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 242  Q
    ||||||| ||||| ||| ||||||||   ||||||||| |||||||||||| | ||||||||||  ||||||||||||||||||    
T  26742754 ttgttgagaatgagttgttattaagcc--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgagtctgaa 26742835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 26952259 - 26952211
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||||    
T  26952259 tgtgatctgattatgctgctgttgttatttaactaagttgcatgagtct 26952211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 10753015 - 10752949
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| | |||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  10753015 ttgatgtgatttaattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 10752949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 21366527 - 21366593
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    |||||||||  ||| | ||||||| ||||| |||||||||||||| |||||||||| ||||||||||    
T  21366527 tgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagct 21366593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 23451601 - 23451539
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtga 76  Q
    |||||||| | ||||||||||||| || ||||||||||||||||| |||||||| | ||||||    
T  23451601 tgattaggaatggaactttaggtagtagtgagacctatttaagatgttaactgaaatctgtga 23451539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 23458845 - 23458783
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtga 76  Q
    |||||||| | ||||||||||||| || ||||||||||||||||| |||||||| | ||||||    
T  23458845 tgattaggaatggaactttaggtagtagtgagacctatttaagatgttaactgaaatctgtga 23458783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 76
Target Start/End: Complemental strand, 23463106 - 23463044
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtga 76  Q
    |||||||| | ||||||||||||| || ||||||||||||||||| |||||||| | ||||||    
T  23463106 tgattaggaatggaactttaggtagtagtgagacctatttaagatgttaactgaaatctgtga 23463044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 26665996 - 26666058
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 79  Q
    ||||| |||||||| ||||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  26665996 ttaggaaaggaactctaggtgctagtgagacctattagagatattgactgagaactgtgaagc 26666058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 26937593 - 26937655
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 79  Q
    ||||| |||||||| ||||| ||| |||||||||||  ||||||| |||||||||||||||||    
T  26937593 ttaggaaaggaactctaggtgctagtgagacctattagagatattgactgagaactgtgaagc 26937655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 123346 - 123399
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  123346 tgttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 123399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 4036290 - 4036225
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||    
T  4036290 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgaatatgaataagttgatga 4036225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 15236643 - 15236724
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||| || |||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  15236643 gattaggaatggaacctttggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 15236724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 23201436 - 23201383
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| ||| |||||  ||||||||||||||||||||| |||||||||||||||    
T  23201436 tgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtc 23201383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 25229271 - 25229332
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 78  Q
    ||||| |||||||||||||| ||||||||||||| | | |||||| ||||||||||| ||||    
T  25229271 ttaggaaaggaactttaggtgctaatgagacctaataatgatattgactgagaactgagaag 25229332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 25229441 - 25229506
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||    
T  25229441 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgaatatgaataagttgatga 25229506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 25293427 - 25293488
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 78  Q
    ||||| |||||||||||||| ||||||||||||| | | |||||| ||||||||||| ||||    
T  25293427 ttaggaaaggaactttaggtgctaatgagacctaataatgatattgactgagaactgagaag 25293488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 25293597 - 25293662
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||| | |||||||| ||||||    
T  25293597 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgaatatgaataagttgatga 25293662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 26666138 - 26666219
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 242  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | ||||||||||||||||    
T  26666138 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaa 26666219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 26937735 - 26937816
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 242  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||||||| ||||||||| ||  | ||||||||||||||||    
T  26937735 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgctgcaattgttattaaactatgttgcatgagtctgaa 26937816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 31342217 - 31342169
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||||||||||||||||||  ||||||||||  |||||||||||||||    
T  31342217 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtct 31342169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 4036461 - 4036398
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    ||||| |||||||||||||| ||||||||||||| | | |||||| ||  ||||||||||||||    
T  4036461 ttaggaaaggaactttaggtgctaatgagacctaataatgatattgaccaagaactgtgaagct 4036398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 12028443 - 12028490
Alignment:
Q  31 ttaggtactaatgagacctatttaagatattaactgagaactgtgaag 78  Q
    ||||||| |||||| ||||||||||||| |||||||||| ||||||||    
T  12028443 ttaggtagtaatgaaacctatttaagatgttaactgagacctgtgaag 12028490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 12028612 - 12028659
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  12028612 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 12028659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 16674393 - 16674322
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| || |||||||||||||||||| |||||||| |||||| | |||| ||||||| ||| | |||||||    
T  16674393 ttaggaaacgaactttaggtactaatgtgacctattaaagataatgactgtgaactgtaaagtttttatgaa 16674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 17517240 - 17517295
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||| |||||  |||||||||||||||||| ||  ||||||||||||||    
T  17517240 gctgttgatgtaatctgcctatgctgctattgttattaaactaagttgcatgagtc 17517295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 17919198 - 17919245
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  17919198 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 17919245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 20805622 - 20805575
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||||||||  |||||||||||||||||||||  ||||||||||||||    
T  20805622 tgtgatctgcctatgctgctattgttatttaactaagttgcatgagtc 20805575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 23501415 - 23501462
Alignment:
Q  204 tgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||||||||||||||| |||||||||||||||   ||||||||||    
T  23501415 tgctgctattgttatttaaccaagttgcatgagtcgatataagatgat 23501462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 24532913 - 24532992
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| |||||||| ||||| ||  |||||||||||  ||||||| |||||||||||||||||  |||||| || |||||    
T  24532913 ttaggaaaggaactctaggtgcttgtgagacctattagagatattgactgagaactgtgaagcctttatgatatactaag 24532992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 21340632 - 21340694
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagc 79  Q
    ||||| |||||||||||||| ||| |||||||||||  ||||| | |||| ||||||||||||    
T  21340632 ttaggaaaggaactttaggtgctagtgagacctattagagataatgactgggaactgtgaagc 21340694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 24221953 - 24221899
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||||||||  ||||||||||  | |||||||||||||    
T  24221953 tgttgttgtgatctgattatgctgctgctgttatttaactaggttgcatgagtct 24221899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 26172536 - 26172470
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  |||||| |||| | ||| |||| ||||||    
T  26172536 ttgatgtgatttgattatgctgcaattgttatttaactaagttgaatgattatgattaagttgatga 26172470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 26704152 - 26704098
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||||| ||| |||||  ||||||||||||||||||||| |||| ||||||||||    
T  26704152 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagctgcatgagtc 26704098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 26973885 - 26973831
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||||| ||| |||||  ||||||||||||||||||||| |||| ||||||||||    
T  26973885 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagctgcatgagtc 26973831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Complemental strand, 20767050 - 20766997
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||| ||  |||||||||||||||||||||  ||||||||||||||    
T  20767050 tgttgttgtgatttgcctatgctgctattgttatttaactaagttgcatgagtc 20766997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 24533055 - 24533136
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaa 242  Q
    ||||||| ||||| ||| |||||||||  ||| ||||| |||||||| ||| ||||||||| ||  | ||||||||||||||||    
T  24533055 ttgttgagaatgatttgttattaagct--tgacgtgatttgattatgttgcaattgttattaaactatgttgcatgagtctgaa 24533136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 3878 - 3960
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||    
T  3878 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttgcatgagt 3960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 3738 - 3819
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||||||||||||||||||||||||| | |||| |||||||  |  |||||||||||  ||||||||||||    
T  3738 gattaggaatggaactttaggtactaatgagacctatctgagatgttaactgttatttgtgaagctatattgaaatgctaag 3819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 18632 - 18733
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| || |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||   |||||||||||||||||||||| ||||    
T  18632 caagaaattattgaaaatgaattgttattaagctgttgatatgatctgattatgctgctattgttatttacctaagttgcatgagtctgaataagttgat 18731  T
Q  252 ga 253  Q
    ||    
T  18732 ga 18733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 96
Target Start/End: Original strand, 18505 - 18576
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||||||||||  ||||||||||| |||||||| | |||||||||||||||| |||||||||||||||    
T  18505 ggaactttaggtactgctgagacctattaaagatattgaatgagaactgtgaagcttttatgaaatgctaag 18576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 12525 - 12443
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| |||||||    
T  12525 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgctattgttatttaactaagttacatgagt 12443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 12665 - 12584
Alignment:
Q  15 gattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| |||||||  |  |||||||||||  ||||||||||||    
T  12665 gattaggaatggaactttaggtactaatgagacctatctaagatgttaactgttatttgtgaagctatattgaaatgctaag 12584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 67; Significance: 7e-30; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 173534 - 173452
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  173534 tgattaggaaaggaactttaggtactaaagagacctattaaagatattaactgagaactttgaagctattatgaaatgctaag 173452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 173395 - 173297
Alignment:
Q  153 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 252  Q
    ||||| ||||||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||||| |||||    
T  173395 aagaaattgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaataagttgatg 173298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 422572 - 422626
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| |||||||| |||||||||||  ||||||||||  |||||||||||||||    
T  422572 tgttgttgtgatctaattatgctgctgctgttatttaactaagttgcatgagtct 422626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 422404 - 422444
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaact 65  Q
    ||||||||||||| |||||| ||||||||||||| ||||||    
T  422404 ggaactttaggtagtaatgaaacctatttaagatgttaact 422444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 7e-30; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 43251916 - 43251834
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||    
T  43251916 gaagttgttgaaaatgaattgatattaagctgttgatatgatctgattatgctgttattgttatttaactaagttgcatgagt 43251834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 19278286 - 19278368
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  19278286 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 19278368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 21972588 - 21972670
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  21972588 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 21972670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 21976673 - 21976755
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  21976673 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 21976755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 16231476 - 16231565
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||| ||||||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||    
T  16231476 caagaatttgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaat 16231565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 16231340 - 16231419
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||| ||||    
T  16231340 ttaggaaagggactttaggtactaatgagacctattaaagatattgactgagaactgtgaagcttttatgaaatgttaag 16231419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 22028798 - 22028719
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| ||||||||||| |||||||||||||||||| |||||||| ||| |||||||||||||| |||||||||| ||||    
T  22028798 ttaggaaaggaactttaagtactaatgagacctattgaagatattgactaagaactgtgaagcttttatgaaatgttaag 22028719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 23834414 - 23834343
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||    
T  23834414 ttaggaaaggaactttaggtactaatgagacctattaaagatattgactgagaactgtgaatcttttatgaa 23834343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 21387177 - 21387079
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||    
T  21387177 caagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgat 21387081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 15603055 - 15603124
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 252  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||  | |||||||||    
T  15603055 gctgttgatgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtctatacaagatgatg 15603124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 18619719 - 18619640
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| ||||||| |||||| ||||||||||||||| |||||||| |||||||||||||||||| |||||| ||| ||||    
T  18619719 ttaggaaaggaaccttaggtgctaatgagacctattaaagatattgactgagaactgtgaagcttttatgagatgttaag 18619640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 22045125 - 22045046
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| || ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| |||||| ||| ||||    
T  22045125 ttaggaaatgaactttagatactaatgagacctattaaagatattgactgagaactgtgaagcttttatgagatgttaag 22045046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 15611507 - 15611576
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 252  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||  | |||||||||    
T  15611507 gctgttgatgtgatctgattatgctggttttgttatttaaccaagttgcatgagtctatacaagatgatg 15611576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 21383756 - 21383659
Alignment:
Q  153 aagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 252  Q
    |||| |||||||||| ||||||| |||||||||  ||||||||| |||||||| ||| ||||||||||||  ||||||||||||| |||||||| |||||    
T  21383756 aagatgttgttgaaa-tgaattgttattaagct--tgatgtgatttgattatgttgcaattgttatttaactaagttgcatgagtatgaataagttgatg 21383660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 22044989 - 22044900
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||| ||||||||||||||||| |||||||||  ||||||||| ||||| |||||| ||||||||  ||  |||||||||||||||||||    
T  22044989 caagaaattgttgaaaatgaattgttattaagct--tgatgtgatttgattgtgctgcaattgttatcaaactaagttgcatgagtctgaat 22044900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 30308619 - 30308682
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||| |||||||||| |||||||    
T  30308619 ttaggaaaggaactttaggtgctaatgagacctattaaagatattgactgagaactctgaagct 30308682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 22010716 - 22010782
Alignment:
Q  186 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 252  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||  | |||||||||    
T  22010716 gttgttgtgatctgattatgctgcttttgttatttaaccaagttgcatgagtctatacaagatgatg 22010782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 30643332 - 30643386
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  30643332 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 30643386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 253
Target Start/End: Original strand, 14398123 - 14398208
Alignment:
Q  166 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| ||||||||| |  ||| ||| |||||||||||| ||||||||||||  ||||||||||||| |||||||| ||||||    
T  14398123 aaatgaattgttattaagcttt--atgcgatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataagttgatga 14398208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 23846880 - 23846951
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  23846880 ttaggaaaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 23846951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 22111954 - 22111904
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatg 205  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  22111954 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatg 22111904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 16861365 - 16861418
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||||||||||||||||| ||||||||||| | |||||||||||||    
T  16861365 tgttgttgtgatctgattatgctgcttttgttatttaaccgagttgcatgagtc 16861418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 17055412 - 17055479
Alignment:
Q  186 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||| || |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  17055412 gttgatgttatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatga 17055479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 18678141 - 18678196
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||| |||||  |||||||||||||||||||||  ||||||||||||||    
T  18678141 gctgttgatgtaatctgcctatgctgctattgttatttaactaagttgcatgagtc 18678196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 32121814 - 32121759
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||| |||||  |||||||||||||||||||||  ||||||||||||||    
T  32121814 gctgttgatgtaatctgcctatgctgctattgttatttaactaagttgcatgagtc 32121759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 252
Target Start/End: Original strand, 16410287 - 16410361
Alignment:
Q  178 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 252  Q
    |||| ||||||| |||||||||  ||||||||||||||||||| |  ||||||||||||||   |||||||||||    
T  16410287 attatgctgttgttgtgatctgcctatgctgctattgttatttcactaagttgcatgagtcattataagatgatg 16410361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 17353984 - 17354050
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||| |||||  ||||||||||||||||||||| |||||||||||||||   ||||||||||    
T  17353984 tgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtcgatataagatgat 17354050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 20465900 - 20465982
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||||| ||| | ||||||| ||||| ||||||| |||||  |||||||  | |||||||||| |||||||||||||||    
T  20465900 tgattagggacggacccttaggtagtaatgtgacctatataagaggttaactgcaatctgtgaagctgttatgaaatgctaag 20465982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 24755790 - 24755724
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||||||||| ||||||||||||||||||||||  | | |||||||||||  ||||||||||    
T  24755790 tgttgttgtgatctgcttatgctgctattgttatttaactatgatgcatgagtctatataagatgat 24755724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 32598750 - 32598684
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| ||||| |||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  32598750 ttgatgtgatttgattgtgctgcaattgttatttaactaagttgcatgattatgaataagttgatga 32598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 32605282 - 32605216
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| ||||| |||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  32605282 ttgatgtgatttgattgtgctgcaattgttatttaactaagttgcatgattatgaataagttgatga 32605216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 19259632 - 19259685
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| ||||| ||| ||||||| |||||||||||||| |||||||||||||||    
T  19259632 tgttgttgtgaactgcttatgctactattgttatttaaccaagttgcatgagtc 19259685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 39094965 - 39095018
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||||||| ||||||||| |||||||||||  ||||||||||||||    
T  39094965 tgttgttgtgatctgaatatgctgcttttgttatttaactaagttgcatgagtc 39095018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 23834277 - 23834188
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||| ||||||| ||||| ||| |||||||||  ||||||||| ||| |||| ||| ||||||||| ||  | |||||||||||||||||    
T  23834277 caagaaattgttgagaatgatttgttattaagct--tgatgtgatttgactatgatgcaattgttattaaactatgttgcatgagtctgaat 23834188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Original strand, 20856472 - 20856518
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||||    
T  20856472 tgtgatctgattatgctgct-ttgttatttaactaagttgcatgagtc 20856518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 16184796 - 16184730
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||| || |||||||||||||||| ||||| ||| |||||||| |||  ||||||||||    
T  16184796 tgttgttgtgatatgcttatgctgctattgttgtttaaccaacttgcatgattctatataagatgat 16184730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 19259443 - 19259517
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||||||| ||| | ||||||| ||||| |||||||  ||||| |||||||  | ||||||||||||||||||    
T  19259443 tgattagggatggacccttaggtagtaatgtgacctatacaagatgttaactgcaatctgtgaagctattatgaa 19259517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 20466079 - 20466133
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| |||||||||  ||| |||||||||||||||||  |||||||||||||||    
T  20466079 tgttgttgtgatctgcctatactgctattgttatttaactaagttgcatgagtct 20466133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 15538683 - 15538618
Alignment:
Q  23 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||||||||||| |||||||||||||||  ||||| | |||| |||| |||||| | |||||||    
T  15538683 aaggaactttaggtgctaatgagacctattagagataatgactgtgaacagtgaagattttatgaa 15538618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 16410116 - 16410169
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactga 67  Q
    |||||||||  ||| | ||||||| ||||| |||||||||||||||||||||||    
T  16410116 tgattagggttggacccttaggtagtaatgtgacctatttaagatattaactga 16410169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 377347 - 377295
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||| ||||||||| || |||||||||||||||||||  | |||||||||||    
T  377347 tgttgttgtgatctgcttgtgctgctattgttatttaactatgttgcatgagt 377295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 17828590 - 17828663
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatg 234  Q
    ||||||| ||||| ||| |||||||||  ||||||||| |||||||||||| | ||||| ||||  ||||||||||    
T  17828590 ttgttgagaatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttaattaactaagttgcatg 17828663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 17926739 - 17926799
Alignment:
Q  178 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||| ||||||| | |||||||  |||||| ||||||||||||||  ||||||||||||||    
T  17926739 attatgctgttgttttgatctgcctatgctactattgttatttaactaagttgcatgagtc 17926799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 39094814 - 39094858
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaactgaga 69  Q
    ||||||| ||||| ||||| |||||||||||||| ||||||||||    
T  39094814 ggaacttaaggtagtaatgtgacctatttaagatgttaactgaga 39094858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 2673 - 2773
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||  |||||||||||||||||||||| ||||    
T  2673 caagaaattgttgaaa-tgaattgttattaagctgttgatgtgatctgattatgctgcaattgttaattaactaagttgcatgagtctgaataagttgat 2771  T
Q  252 ga 253  Q
    ||    
T  2772 ga 2773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 2535 - 2617
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  2535 tgattaggaaatgaactttaggtactaatgagacctatttaagatattaactgagaattgtgaagcttttatgaactgctaag 2617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 9527 - 9603
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaat 90  Q
    |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9527 tgattaggaaaggaaccttaggtactaatgagacctatttaagatattaactgagaactgtgaagcttttatgaaat 9603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 253
Target Start/End: Original strand, 9681 - 9766
Alignment:
Q  166 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||  |||||||||||||||| ||||| ||||||| ||||  | ||||||||||||| |||||| ||||||    
T  9681 aaatgaattgttattaagct--tgatgtgatctgattacgctgcaattgttaattaactatgttgcatgagtctaaataagttgatga 9766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 5104 - 5186
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||  |||||||||||||    
T  5104 gaagttgttgaaaatgaattgatattaagttgttgatatgagctgattatgctgctattgttatttaactaagttgcatgagt 5186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 13349 - 13431
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| || ||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  13349 tgattaggaaatgaattttaggtactaatgagacctatttaagatattaactgataactgtgtagctattatgaaatgctaag 13431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 13487 - 13557
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaa 222  Q
    ||||||||||||||| ||  |||||||||||| |||||||||||||||||||| ||| |||||||| ||||    
T  13487 caagaagttgttgaagatcgattgatattaagttgttgatgtgatctgattattctgttattgttaattaa 13557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 228374 - 228473
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| | ||||||||||||||| |||||||||  |||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||| ||||    
T  228374 caagaaatagttgaaaatgaattgttattaagct--tgatgtgatctgattatgctgcaattgttatttaactaagttgcatgagtctgaataagttgat 228471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 228238 - 228317
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  228238 ttaggaaaggaaccttaggtactaatgagacctacttaagatattaactgagaactgtgaagtttttatgaaatgctaag 228317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 10458 - 10528
Alignment:
Q  26 gaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10458 gaactttaagtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatactaag 10528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 69871 - 69804
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||| |||||  ||||||||||||||||||||| ||||||||||||||| | ||||||||||    
T  69871 ctgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtcggtataagatgat 69804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 58722 - 58804
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||    
T  58722 gaagttgttgaaaatgaattggtattaagctgttgatataatctgattatgctgctattgttatttaactaagttacatgagt 58804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 59; Significance: 4e-25; HSPs: 5)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 71557 - 71475
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||||  |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  71557 tgattaggagaggaaccttaggtactaatgagacctatttaagatgttaactgagaactgtgaagctattgtgaaatgttaag 71475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 414091 - 414145
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| |||||||||||||||||||| |||||||||||  |||||||||| ||||    
T  414091 tgttgttgtgatctgattatgctgctgttgttatttaactaagttgcatgcgtct 414145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 139951 - 139890
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 78  Q
    ||||| |||||||||||||| ||| |||||||||||  ||||| | ||||||||||||||||    
T  139951 ttaggaaaggaactttaggtgctagtgagacctattagagataatgactgagaactgtgaag 139890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 71129 - 71074
Alignment:
Q  198 tgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||||| ||||||||||||  ||||||||||||| |||||| | ||||||    
T  71129 tgattatgctgcaattgttatttaactaagttgcatgagtatgaatatgttgatga 71074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 139809 - 139736
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatg 234  Q
    ||||||| ||||| ||| | |||||||  ||||||||| |||||||||||| | ||||||||||  ||||||||||    
T  139809 ttgttgagaatgatttgttgttaagct--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatg 139736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 19882 - 19954
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaa 89  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||    
T  19882 ttaggaaaggaactttaggtactaatgagacctattaaagatattaattgagaactgtgaagcttttatgaaa 19954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 20018 - 20117
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||||||||||||||||| |||||||||  |||||||||||||||||| ||| ||||||||| ||  ||||||||||| |||||||||| ||||    
T  20018 caagaaattgttgaaaatgaattgttattaagct--tgatgtgatctgattatgttgcaattgttattaaactaagttgcatgaatctgaataagttgat 20115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 3395 - 3474
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| |||||||||| ||||    
T  3395 ttaggaaaggaactttaggtactaatgagacccattaaagatattgactgagaactgtgaagcttttatgaaatgttaag 3474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 3531 - 3620
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||| ||||||||||||||||| |||||||||  ||||||||| ||||||| |||| ||||||||||||  |||||||||||||||||||    
T  3531 caagaaattgttgaaaatgaattgttattaagct--tgatgtgatttgattatactgcaattgttatttaactaagttgcatgagtctgaat 3620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 24833 - 24912
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||| |||||| ||||    
T  24833 ttaggaaaggaactttaggtactaatgagacctattaaagatattgactgagaactgtgaagcttttaggaaatgttaag 24912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 24980 - 25059
Alignment:
Q  162 ttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||||||  ||| |||||||||  ||||||||| |||||||||||| ||||||||| ||   ||||||||||||||||||    
T  24980 ttgaaaatgtgttgttattaagct--tgatgtgatttgattatgctgcaattgttattaaactgagttgcatgagtctgaat 25059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 237
Target Start/End: Original strand, 35946 - 36027
Alignment:
Q  155 gaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    ||||||||||||| | ||||||||||||||||||||| |||||| |||||||||||||||||||||||  |||||||||||||    
T  35946 gaagttgttgaaatt-aattgatattaagctgttgatatgatctaattatgctgctattgttatttaactaagttgcatgagt 36027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 7185 - 7114
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| || ||||||||||| |||||| |||||||| |||||||| |||||||||| ||||||| |||||||    
T  7185 ttaggaaaagaactttaggtgctaatgtgacctattaaagatattgactgagaactctgaagcttttatgaa 7114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 7016 - 6950
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||| ||  | ||||||||||  |||||||| ||||||    
T  7016 ttgatgtgatttgattatgctgcaattgttattaaactatgttgcatgagcatgaataagttgatga 6950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 18368 - 18450
Alignment:
Q  159 ttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    ||||||||||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||    
T  18368 ttgttgaaaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgagtctgaat 18450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 18225 - 18304
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||| |||||||||||||| ||||||||||||||| |||||| | |||||||||||||||||| |||||| ||| ||||    
T  18225 ttaggaaaggaactttaggtgctaatgagacctattaaagataatgactgagaactgtgaagcttttatgatatgttaag 18304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 235 - 169
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||    
T  235 tgttgatgtgatctgattatgctgctattgttatttaactaagttgcatgagtctatataagatgat 169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 163 - 91
Alignment:
Q  24 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||||||||||||||||||| |||| || ||||| |||||||||||||||||| |||||||||| ||||    
T  163 aggaactttaggtactaatgagacttattaaaaatattgactgagaactgtgaagcttttatgaaatgttaag 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 5702 - 5608
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaag-------ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| |||||||||||||||||||||||| |       |||||| ||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  5702 caagatgttgttgaaaatgaattgatattatgaactatgctgttgttgtgatctgattatgctgctactgttatttaactaagttgcatgagtct 5608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 6897 - 6803
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaag-------ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| |||||||||||||||||||||||| |       |||||| ||||||||||||||||||||| ||||||||||  |||||||||||||||    
T  6897 caagatgttgttgaaaatgaattgatattatgaactatgctgttgttgtgatctgattatgctgctactgttatttaactaagttgcatgagtct 6803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 253
Target Start/End: Original strand, 20479 - 20564
Alignment:
Q  166 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||  ||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  20479 aaatgaattgttattaagct--tgatgtgatttgattatgctgcaattgttatttaactaagttgcatgaatatgaataagttgatga 20564  T

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Target: scaffold0216 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 17150 - 17206
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  17150 gctgttgatgtgatctgattatgctgctattgttatttaactaagttccatgagtct 17206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1052 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1052
Description:

Target: scaffold1052; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 2981 - 2918
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagat 248  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| |||||  |||||||    
T  2981 tgttgatgtgatctgattatgctgctattgttatttaactaagttgcataagtctatataagat 2918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 6784 - 6693
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataag 246  Q
    ||||| |||||||||| ||||||| |||||||||  ||||| ||| |||||||||||| ||||||||||||  ||||||||||||| ||||||||    
T  6784 caagatgttgttgaaa-tgaattgttattaagct--tgatgagatttgattatgctgcaattgttatttaactaagttgcatgagtatgaataag 6693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 23457 - 23386
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||| |||| ||||||||||||||||| |||||||| |||||||||| ||||||| |||||||    
T  23457 ttaggaaaggaaccttagttactaatgagacctattcaagatattgactgagaactatgaagcttttatgaa 23386  T

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Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 23321 - 23232
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaat 243  Q
    |||||| ||||||| ||||| ||| |||||||||  ||||||||| |||||| ||||| ||| ||||| ||  | ||| |||||||||||||    
T  23321 caagaaattgttgagaatgatttgttattaagct--tgatgtgatttgattaagctgcaattattattaaactatgtttcatgagtctgaat 23232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 6349 - 6403
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  6349 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 6403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 4685 - 4603
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||| | ||||||||||||| || |||||||||| |||||  |||||||  ||||||||| ||||||||||||||||||    
T  4685 tgattaggaatggaactttaggtagtagtgagacctatataagaagttaactgtaaactgtgaaactattatgaaatgctaag 4603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 4513 - 4452
Alignment:
Q  178 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  4513 attatgctgttgttgtgatctgattatgctgccattgttatttaactaagttgcatgagtct 4452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 541 - 471
Alignment:
Q  166 aaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaa-tcaagttgcatgagt 237  Q
    |||||||||| |||||||||  |||| |||  ||||||||||||||||||||||||| | |||||||||||||    
T  541 aaatgaattgttattaagct--tgatatgaattgattatgctgctattgttatttaactaaagttgcatgagt 471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 365 - 299
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||||||||||||| |||||||||||  |||||||||||||||  ||||||||||    
T  365 tgttgttgtgatctgattatgctgcttttgttatttaactaagttgcatgagtctatataagatgat 299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 534 - 460
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||||| | || |||||||||| ||||| |||||||||||||| |||||||||| |||||||||| |||||||    
T  534 tgattaggaatgggactttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaa 460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 5862 - 5928
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    |||||||| |||||||||||||||||||||||||||| | | |||||| |||||||| |||||||||    
T  5862 tgattaggaaaggaactttaggtactaatgagacctaataatgatattgactgagaattgtgaagct 5928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 6035 - 6100
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||||||| ||  ||||||||||||| |||||||| ||||||    
T  6035 tgatgtgatttgattatgctgcaattgttattaaactaagttgcatgagtatgaataagttgatga 6100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 42703 - 42649
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  42703 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 42649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 42860 - 42803
Alignment:
Q  31 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||||| ||||| |||||||||||||| |||||||||| |||||||||| |||||||    
T  42860 ttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaa 42803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 30988 - 30890
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||| ||||||| |||||||||  ||||| ||| |||||||||||  ||||||||||||  ||||||||||||| |||||||| ||||    
T  30988 caagatgttgttgaaa-tgaattgttattaagct--tgatgagatttgattatgctgtaattgttatttaactaagttgcatgagtatgaataagttgat 30892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 73807 - 73861
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  73807 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 73861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 439 - 374
Alignment:
Q  188 tgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||||||| | |||||||| ||||||    
T  439 tgatgtgatttgattatgctgcaattgttatttaattaagttgcatgattatgaataagttgatga 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 587 - 531
Alignment:
Q  24 aggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    |||||| |||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  587 aggaaccttaggtactaatgaaacctattaaagatattgactgagaactgtgaagct 531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 2125 - 2178
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  2125 tgttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtc 2178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 1962 - 2020
Alignment:
Q  31 ttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaa 89  Q
    ||||||| ||||| ||||||||||||||||||||||| |  ||||||||| ||||||||    
T  1962 ttaggtagtaatgtgacctatttaagatattaactgaaatatgtgaagctgttatgaaa 2020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 1569 - 1516
Alignment:
Q  186 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||| ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  1569 gttgttgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 1516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 1748 - 1682
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    |||||||||  ||| | ||||||| ||||| |||||||||||||| |||||||||| ||||||||||    
T  1748 tgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgagatctgtgaagct 1682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 463 - 415
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  463 tgtgatctgattatgctgctattgttatttaactaagttgcatgagtct 415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 648 - 574
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| |||| ||| | ||||||| ||||| |||||||||||||| |||| ||||| ||||||||||| ||||||    
T  648 tgatttgggatggacccttaggtagtaatgcgacctatttaagatgttaattgagatctgtgaagctactatgaa 574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 10085 - 10149
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||| | |||  ||||||||||    
T  10085 ttgatgtgatctgattatgctgctattgttatttaactaagttgcataaatctatataagatgat 10149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 1362 - 1425
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||||||| || ||||| |||||||||||||| |||||||||| |||||||||| |||||||    
T  1362 ggaactttagttagtaatgtgacctatttaagatgttaactgagatctgtgaagctgttatgaa 1425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 1530 - 1584
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| |||||||||||||||||||| | |||||||||  |||||||||||||||    
T  1530 tgttgttgtgatctgattatgctgctttggttatttaactaagttgcatgagtct 1584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Original strand, 6122 - 6193
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| || ||||||||||| |||||| |||||||| |||||||| |||||||||| ||||||| |||||||    
T  6122 ttaggaaaagaactttaggtgctaatgtgacctattaaagatattgactgagaactctgaagcttttatgaa 6193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 6291 - 6357
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||| ||  | ||||||||||  |||||||| ||||||    
T  6291 ttgatgtgatttgattatgctgcaattgttattaaactatgttgcatgagcatgaataagttgatga 6357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 9591 - 9536
Alignment:
Q  183 gctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||||||||||||||| || |||||||||||||  ||||||||||||||    
T  9591 gctgttgatgtgatctgattatgttgttattgttatttaactaagttgcatgagtc 9536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 1913 - 1853
Alignment:
Q  178 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||| ||||||| |||||||||  |||||||| ||||||||||||  ||||||||||||||    
T  1913 attatgctgttgttgtgatctgcctatgctgccattgttatttaactaagttgcatgagtc 1853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 10144 - 10073
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| | |||| ||||||||||| | |||||||    
T  10144 ttaggaaaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaagtttttatgaa 10073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 10008 - 9909
Alignment:
Q  152 caagaagttgttgaaaatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||||||| ||||| ||| |||||| |   ||||||||| |||||||||||| | ||||||||||  |||||||||| || |||||||| ||||    
T  10008 caagaaattgttgagaatgatttgttattaaacc--tgatgtgatttgattatgctgcaaatgttatttaactaagttgcatgtgtatgaataagctgat 9911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 6171 - 6105
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||  ||||||||||||||||||||| |||||||||||||||   ||||||||||    
T  6171 tgttgttgtgatctgcctatgctgctattgttatttaaccaagttgcatgagtcaatataagatgat 6105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 9406 - 9340
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  9406 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatga 9340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 4086 - 4160
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||||| | ||||||||||||| ||||| |||||||||||||| ||||||||||  |||||| || |||||||    
T  4086 tgattaggaatggaactttaggtagtaatgtgacctatttaagatgttaactgagatatgtgaatctgttatgaa 4160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 15280 - 15361
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    ||||||||  |||||| || |||||||||||||| |||| || || |||||||||||||||||||||||| ||||||| ||||    
T  15280 tgattaggagaggaacctttggtactaatgagacatattaaa-atgttaactgagaactgtgaagctattgtgaaatgataag 15361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 77205 - 77271
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  77205 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcatgattatgaataagttgatga 77271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 9661 - 9600
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaag 78  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| | |||| |||||||||||    
T  9661 ttaggaaaggaactttaggtactaatgtgacctattaaagataatgactgtgaactgtgaag 9600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 184 - 253
Target Start/End: Original strand, 207880 - 207949
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||| |||| |||||||||||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  207880 ctgttgatatgatatgattatgctgcaattgttatttaactaagttgcatgaatatgaataagttgatga 207949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 30783 - 30836
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||    
T  30783 tgttgttgtgatccgattatgctgcttttgttatttaaccaagttgcatgagtc 30836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 1948 - 1882
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||| ||||||  ||||||||||| | |||||||| ||||||    
T  1948 ttgatgtgatttgattatgctgcaattgtgatttaactaagttgcatgattatgaataagttgatga 1882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 30606 - 30659
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactga 67  Q
    |||||||| | ||||||||||||| |  ||||||||||||||||| ||||||||    
T  30606 tgattaggaatggaactttaggtagttgtgagacctatttaagatgttaactga 30659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 36540 - 36476
Alignment:
Q  23 aaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 87  Q
    |||||||||||||| ||| |||||||||||  ||||| | |||||||||||||||||| ||||||    
T  36540 aaggaactttaggtgctagtgagacctattagagataatgactgagaactgtgaagcttttatga 36476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 36396 - 36331
Alignment:
Q  167 aatgaattgatattaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatg 234  Q
    ||||| ||| |||||||||  ||||||||| |||||||||||| | ||||||||||| ||||||||||    
T  36396 aatgatttgttattaagct--tgatgtgatttgattatgctgcaaatgttatttaattaagttgcatg 36331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 44164 - 44104
Alignment:
Q  178 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||| ||||||| |||||||||  |||||||||||||||||||||  ||||||||||||||    
T  44164 attatgctgttgttgtgatctgcctatgctgctattgttatttaactaagttgcatgagtc 44104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Complemental strand, 44335 - 44269
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    |||||||||  ||| | ||||||| ||||| |||||||||||||| |||||||| | ||||||||||    
T  44335 tgattagggttggacccttaggtagtaatgtgacctatttaagatgttaactgaaatctgtgaagct 44269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 18595 - 18524
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| | |||| ||||| ||||| | |||||||    
T  18595 ttaggaaaggaactttaggtactaatgtgacctattaaagataatgactgtgaactatgaagtttttatgaa 18524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 20057 - 19990
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||||| ||| |||||  |||||| ||||||||||||||||||| |||||||||| | ||||||||||    
T  20057 ctgttgttgtaatctgcctatgctactattgttatttaatcaagctgcatgagtcggtataagatgat 19990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 18695 - 18750
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||||| |||||||||  |||||||||||||||||||||  |||||||||||||||    
T  18695 ctgttgttgtgatctgcctatgctgctattgttatttaactaagttgcatgagtct 18750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 18517 - 18594
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatg 91  Q
    ||||| |||| ||| | ||||||| ||||||||||||| |||||  |||||||  | |||||||||| ||||||||||    
T  18517 tgatttgggatggacccttaggtagtaatgagacctatataagaagttaactgcaatctgtgaagctgttatgaaatg 18594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 64094 - 64023
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    ||||| ||||||||||||||||||||| |||||||| |||||| | |||  ||||||||||| | |||||||    
T  64094 ttaggaaaggaactttaggtactaatgtgacctattaaagataatgactatgaactgtgaagtttttatgaa 64023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 34960 - 35014
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||| ||||||||||||||||||||||  | | |||||||||||    
T  34960 tgttgttgtgatctgcttatgctgctattgttatttaactatgatgcatgagtct 35014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 7547 - 7493
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||||||||  ||||||||||  |||||||||||||||    
T  7547 tgttgctgtgatctgattatgctgctgctgttatttaactaagttgcatgagtct 7493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 15409 - 15343
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||||||| ||||||||||||  ||||||||| | | |||||||| ||||||    
T  15409 ttgatgtgatttgattatgctgcaattgttatttaactaagttgcataattatgaataagttgatga 15343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 15157 - 15111
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagt 237  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||    
T  15157 tgtgatctgattatgctgttattgttatttaactaagttgcatgagt 15111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 21844 - 21910
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||| |||||  ||||||||||||||||||||| |||||||||||||||   ||||||||||    
T  21844 tgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtcgatataagatgat 21910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 29736 - 29802
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||| |||||  ||||||||||||||||||||| |||||||||||||||   ||||||||||    
T  29736 tgttgttgtaatctgcctatgctgctattgttatttaaccaagttgcatgagtcgatataagatgat 29802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 21670 - 21740
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 87  Q
    ||||||| ||| | ||||||| ||||||||||||| |||||| |||||||  | |||||||||| ||||||    
T  21670 ttagggatggacccttaggtagtaatgagacctatataagatgttaactgcaatctgtgaagctgttatga 21740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 29562 - 29632
Alignment:
Q  17 ttagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 87  Q
    ||||||| ||| | ||||||| ||||||||||||| |||||| |||||||  | |||||||||| ||||||    
T  29562 ttagggatggacccttaggtagtaatgagacctatataagatgttaactgcaatctgtgaagctgttatga 29632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 8571 - 8505
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||| ||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  8571 ttgatgtgatttgattatgttgcaattgttatttaactaagttgcatgattatgaataagttgatga 8505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 15715 - 15649
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| |||||||| ||| ||||||||||||  ||||||||||| | |||||||| ||||||    
T  15715 ttgatgtgatttgattatgttgcaattgttatttaactaagttgcatgattatgaataagttgatga 15649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 251
Target Start/End: Original strand, 4841 - 4911
Alignment:
Q  181 aagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||||| |||||||||  |||||||||||| ||||||||  ||||||||||||||   ||||||||||    
T  4841 aagctgttgttgtgatctgcctatgctgctattattatttaactaagttgcatgagtcaatataagatgat 4911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 14740 - 14674
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||  ||||||||||||||||||||| ||||||| |||||||   ||||||||||    
T  14740 tgttgttgtgatctgcctatgctgctattgttatttaaccaagttgtatgagtcaatataagatgat 14674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 23755 - 23689
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||  ||||||||||||||||||||| ||||||| |||||||   ||||||||||    
T  23755 tgttgttgtgatctgcctatgctgctattgttatttaaccaagttgtatgagtcaatataagatgat 23689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 39179 - 39113
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||  ||||||||||||||||||||| ||||||| |||||||   ||||||||||    
T  39179 tgttgttgtgatctgcctatgctgctattgttatttaaccaagttgtatgagtcaatataagatgat 39113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 14127 - 14193
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||||||||| ||||||||||||||||||||||  | | |||||||||||  ||||||||||    
T  14127 tgttgttgtgatctgcttatgctgctattgttatttaactatgatgcatgagtctatataagatgat 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 253
Target Start/End: Original strand, 80810 - 80876
Alignment:
Q  187 ttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatga 253  Q
    |||||||||| | |||||||||| ||||||||||||  |||||||| |||| |||||||| ||||||    
T  80810 ttgatgtgatttaattatgctgcaattgttatttaactaagttgcaagagtatgaataagttgatga 80876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 21430 - 21496
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagct 80  Q
    |||||||||| ||| | ||||||| ||||| |||||||||||||| |||||||| |  |||||||||    
T  21430 tgattagggatggacccttaggtagtaatgtgacctatttaagatgttaactgaaatttgtgaagct 21496  T

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Target: scaffold0023 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 38520 - 38586
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| |||||||||  |||||||||||||||||||||  ||||||||||||||   ||||||||||    
T  38520 tgttgttgtgatctgtctatgctgctattgttatttaactaagttgcatgagtcaatataagatgat 38586  T

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Target: scaffold0297 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 15737 - 15786
Alignment:
Q  202 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||||||||||||||||||| |||||||||||||||   ||||||||||    
T  15737 tatgctgctattgttatttaaccaagttgcatgagtcgatataagatgat 15786  T

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Target: scaffold0297; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 10580 - 10629
Alignment:
Q  202 tatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    |||| |||||||||||||||| |||||||||||||||   ||||||||||    
T  10580 tatgttgctattgttatttaaccaagttgcatgagtcgatataagatgat 10629  T

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Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 35552 - 35605
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  35552 tgttgttgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 35605  T

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Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 19773 - 19826
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||||||| ||||||||| |||||||||||  ||||||||||||||    
T  19773 tgttgttgtgatctgaatatgctgcttttgttatttaactaagttgcatgagtc 19826  T

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Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 15251 - 15304
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||||||| |||| |||| |||||||||||  ||||||||||||||    
T  15251 tgttgttgtgatctgaatatgatgcttttgttatttaactaagttgcatgagtc 15304  T

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Target: scaffold0367 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 980 - 920
Alignment:
Q  178 attaagctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||| ||||||| |||||||||  |||||||||||||||||| ||  ||||||||||||||    
T  980 attatgctgttgttgtgatctgcctatgctgctattgttattgaactaagttgcatgagtc 920  T

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Target: scaffold0637 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 8630 - 8583
Alignment:
Q  191 tgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||||||||||||  ||||||||||  ||||||||||||||    
T  8630 tgtgatctgattatgctgctgctgttatttaactaagttgcatgagtc 8583  T

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Target: scaffold0637; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 8799 - 8752
Alignment:
Q  31 ttaggtactaatgagacctatttaagatattaactgagaactgtgaag 78  Q
    ||||||| |||||| ||||||||||||| |||||||||| ||||||||    
T  8799 ttaggtagtaatgaaacctatttaagatgttaactgagacctgtgaag 8752  T

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Target: scaffold0015 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 192189 - 192252
Alignment:
Q  25 ggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaa 88  Q
    |||||||  |||| ||||| |||||||||||||| |||||||||| |||||||| | |||||||    
T  192189 ggaacttagggtagtaatgtgacctatttaagatgttaactgagatctgtgaagttgttatgaa 192252  T

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Target: scaffold0439 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 2477 - 2531
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||||||||  ||||||||||  || ||||||||||||    
T  2477 tgttgttgtgatctgattatgctgctgctgttatttaactaaattgcatgagtct 2531  T

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Target: scaffold0439; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 10337 - 10391
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    ||||| ||||||||||||||||||||  ||||||||||  || ||||||||||||    
T  10337 tgttgttgtgatctgattatgctgctgctgttatttaactaaattgcatgagtct 10391  T

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Target: scaffold0215 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Complemental strand, 26904 - 26838
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||| |||||  ||||||||||||||||||||| |||| ||||||||||   ||||||||||    
T  26904 tgttgttgtaatctgcctatgctgctattgttatttaaccaagatgcatgagtcgatataagatgat 26838  T

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Target: scaffold0102 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 48500 - 48550
Alignment:
Q  184 ctgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatg 234  Q
    |||||| |||||||||  ||||||||||||||||||||| | |||||||||    
T  48500 ctgttgttgtgatctgtctatgctgctattgttatttaacctagttgcatg 48550  T

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Target: scaffold0101 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 251
Target Start/End: Original strand, 9004 - 9070
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgat 251  Q
    ||||| ||| |||||  |||||||||||| |||||||| |||||||||||||||   ||||||||||    
T  9004 tgttgttgtaatctgcctatgctgctattattatttaaccaagttgcatgagtcgatataagatgat 9070  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 46588 - 46670
Alignment:
Q  14 tgattagggaaggaactttaggtactaatgagacctatttaagatattaactgagaactgtgaagctattatgaaatgctaag 96  Q
    |||||||||| |||   ||||||| ||||| ||||||| |||||  |||||||  | |||||||||| |||||||||||||||    
T  46588 tgattagggatggactcttaggtagtaatgtgacctatataagaagttaactgcaatctgtgaagctgttatgaaatgctaag 46670  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 16696 - 16762
Alignment:
Q  186 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtctgaataagatgatg 252  Q
    |||||| |||| |||||||||||| ||||||||||||  |||| |||||| | |||||||| |||||    
T  16696 gttgatatgatttgattatgctgcaattgttatttaactaagtcgcatgattatgaataagttgatg 16762  T

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Target: scaffold0574 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 7878 - 7911
Alignment:
Q  205 gctgctattgttatttaatcaagttgcatgagtc 238  Q
    |||||||||||||||||| |||||||||||||||    
T  7878 gctgctattgttatttaaccaagttgcatgagtc 7911  T

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Target: scaffold0342 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 7311 - 7364
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| ||||||||||||||| ||||  ||||||||||  ||||||||||||||    
T  7311 tgttgttgtgatctgattatgttgctgctgttatttaactaagttgcatgagtc 7364  T

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Target: scaffold0158 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 2907 - 2854
Alignment:
Q  186 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||| ||||||||| || |||||||||||||||||||  | |||||||||||||    
T  2907 gttgttgtgatctgcttgtgctgctattgttatttaactatgttgcatgagtct 2854  T

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Target: scaffold0158; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 6573 - 6520
Alignment:
Q  186 gttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtct 239  Q
    |||| ||||||||| || |||||||||||||||||||  | |||||||||||||    
T  6573 gttgttgtgatctgcttgtgctgctattgttatttaactatgttgcatgagtct 6520  T

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Target: scaffold0096 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 16389 - 16442
Alignment:
Q  185 tgttgatgtgatctgattatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||| |||||| ||  |||||||||||||||||||||  ||||||||||||||    
T  16389 tgttgttgtgatatgcctatgctgctattgttatttaactaagttgcatgagtc 16442  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 175005 - 174952
Alignment:
Q  34 ggtactaatgagacctatttaagatattaactgagaactgtgaagctattatga 87  Q
    |||| ||||||||||||| |||||  |||||||| | |||||||||||||||||    
T  175005 ggtagtaatgagacctatataagaagttaactgaaatctgtgaagctattatga 174952  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 178957 - 178921
Alignment:
Q  202 tatgctgctattgttatttaatcaagttgcatgagtc 238  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  178957 tatgctgctattgttatttaaccaagctgcatgagtc 178921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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