View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3683_high_27 (Length: 312)

Name: NF3683_high_27
Description: NF3683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3683_high_27
NF3683_high_27
[»] chr8 (32 HSPs)
chr8 (9-294)||(34176979-34177263)
chr8 (12-57)||(35634342-35634387)
chr8 (12-56)||(15230175-15230219)
chr8 (14-57)||(15230071-15230114)
chr8 (9-56)||(39474680-39474727)
chr8 (9-54)||(34214448-34214493)
chr8 (9-57)||(2535795-2535843)
chr8 (12-56)||(10445579-10445623)
chr8 (12-56)||(25124807-25124851)
chr8 (12-56)||(42945252-42945296)
chr8 (12-56)||(42945358-42945402)
chr8 (12-54)||(11761978-11762020)
chr8 (12-54)||(34213902-34213944)
chr8 (12-54)||(34665908-34665950)
chr8 (12-53)||(21432831-21432872)
chr8 (12-56)||(27500226-27500270)
chr8 (12-56)||(37542362-37542406)
chr8 (12-56)||(44664646-44664690)
chr8 (12-56)||(44664752-44664796)
chr8 (11-57)||(7294238-7294284)
chr8 (12-46)||(8997943-8997977)
chr8 (14-56)||(21432937-21432979)
chr8 (12-54)||(34176579-34176621)
chr8 (12-54)||(34666461-34666503)
chr8 (9-54)||(2534830-2534875)
chr8 (12-53)||(41353820-41353861)
chr8 (12-56)||(6471828-6471872)
chr8 (12-56)||(27500332-27500376)
chr8 (12-56)||(38003593-38003637)
chr8 (9-53)||(38003701-38003745)
chr8 (14-56)||(6471934-6471976)
chr8 (12-52)||(25124701-25124741)
[»] chr3 (52 HSPs)
chr3 (12-294)||(32716387-32716668)
chr3 (11-57)||(40788557-40788603)
chr3 (12-57)||(13948918-13948963)
chr3 (12-56)||(3469338-3469382)
chr3 (12-56)||(3469444-3469488)
chr3 (12-56)||(29118676-29118720)
chr3 (12-56)||(35643989-35644033)
chr3 (12-56)||(40788664-40788708)
chr3 (12-57)||(35759046-35759091)
chr3 (12-56)||(3596353-3596397)
chr3 (12-56)||(29686079-29686123)
chr3 (12-56)||(41422110-41422154)
chr3 (12-56)||(52032276-52032320)
chr3 (12-56)||(52032383-52032427)
chr3 (12-55)||(32306669-32306712)
chr3 (12-55)||(43105371-43105414)
chr3 (9-56)||(47551628-47551675)
chr3 (12-54)||(1756688-1756730)
chr3 (12-54)||(2944051-2944093)
chr3 (12-54)||(2944586-2944628)
chr3 (12-54)||(11026552-11026594)
chr3 (12-54)||(37249718-37249760)
chr3 (11-57)||(43608727-43608773)
chr3 (12-54)||(45278682-45278724)
chr3 (12-54)||(45279204-45279246)
chr3 (12-54)||(48189019-48189061)
chr3 (12-53)||(3596247-3596288)
chr3 (12-57)||(9368546-9368591)
chr3 (14-51)||(11910839-11910876)
chr3 (12-57)||(29192910-29192955)
chr3 (12-56)||(10307619-10307663)
chr3 (12-56)||(29118782-29118826)
chr3 (17-56)||(29686185-29686224)
chr3 (12-55)||(37778518-37778561)
chr3 (12-54)||(1757224-1757266)
chr3 (9-55)||(4322726-4322772)
chr3 (12-54)||(32717025-32717067)
chr3 (12-54)||(37249337-37249379)
chr3 (12-54)||(43105754-43105796)
chr3 (12-54)||(48188516-48188558)
chr3 (12-57)||(1078674-1078719)
chr3 (12-57)||(6956387-6956432)
chr3 (12-57)||(10294699-10294744)
chr3 (12-56)||(10294804-10294847)
chr3 (12-56)||(32306562-32306606)
chr3 (12-56)||(43998283-43998327)
chr3 (12-56)||(43998389-43998433)
chr3 (11-54)||(42855553-42855596)
chr3 (12-54)||(11026075-11026117)
chr3 (15-49)||(41989541-41989575)
chr3 (12-57)||(29192173-29192218)
chr3 (9-46)||(41558138-41558175)
[»] chr4 (45 HSPs)
chr4 (12-296)||(23455092-23455375)
chr4 (12-56)||(27069048-27069092)
chr4 (12-56)||(27069154-27069198)
chr4 (12-56)||(39666914-39666958)
chr4 (9-57)||(40316908-40316956)
chr4 (9-57)||(40326982-40327030)
chr4 (12-56)||(50503963-50504007)
chr4 (9-56)||(51859542-51859589)
chr4 (12-57)||(10408027-10408072)
chr4 (12-57)||(32063581-32063626)
chr4 (12-56)||(11524087-11524131)
chr4 (12-56)||(22718183-22718227)
chr4 (12-56)||(39701047-39701091)
chr4 (12-56)||(45463211-45463255)
chr4 (12-56)||(45463317-45463361)
chr4 (12-56)||(50504069-50504113)
chr4 (12-56)||(52573366-52573410)
chr4 (12-56)||(54858804-54858848)
chr4 (12-55)||(147457-147500)
chr4 (12-55)||(52815801-52815844)
chr4 (12-54)||(23455609-23455651)
chr4 (12-54)||(38982516-38982558)
chr4 (12-54)||(52816343-52816385)
chr4 (12-54)||(56556720-56556762)
chr4 (12-57)||(30641655-30641700)
chr4 (12-53)||(39667023-39667064)
chr4 (12-57)||(51859650-51859694)
chr4 (12-57)||(54858698-54858743)
chr4 (12-56)||(9731456-9731500)
chr4 (12-56)||(22986989-22987033)
chr4 (12-56)||(27891722-27891766)
chr4 (12-56)||(39701153-39701197)
chr4 (12-56)||(52573472-52573516)
chr4 (9-56)||(10408133-10408180)
chr4 (17-56)||(11524193-11524232)
chr4 (14-52)||(3032722-3032760)
chr4 (9-55)||(50751745-50751791)
chr4 (12-54)||(56557245-56557287)
chr4 (15-51)||(5818024-5818060)
chr4 (12-55)||(148002-148045)
chr4 (12-54)||(55867362-55867404)
chr4 (9-54)||(11447977-11448022)
chr4 (12-56)||(22718077-22718121)
chr4 (12-56)||(22987095-22987139)
chr4 (15-51)||(38813695-38813731)
[»] chr1 (31 HSPs)
chr1 (12-69)||(5734147-5734204)
chr1 (9-56)||(49955482-49955529)
chr1 (12-56)||(7371428-7371472)
chr1 (12-56)||(8898655-8898699)
chr1 (12-56)||(17189092-17189136)
chr1 (12-56)||(31058301-31058345)
chr1 (12-56)||(35040858-35040902)
chr1 (12-56)||(40714582-40714626)
chr1 (12-56)||(49955591-49955635)
chr1 (12-57)||(35038593-35038638)
chr1 (9-54)||(46282713-46282758)
chr1 (12-56)||(28324942-28324986)
chr1 (12-56)||(45749980-45750024)
chr1 (12-51)||(45750091-45750130)
chr1 (11-53)||(20760752-20760794)
chr1 (12-54)||(46282209-46282251)
chr1 (12-54)||(49093179-49093221)
chr1 (12-54)||(49093733-49093775)
chr1 (12-57)||(32132442-32132487)
chr1 (12-56)||(8898761-8898805)
chr1 (12-56)||(12905903-12905947)
chr1 (12-56)||(40714688-40714731)
chr1 (12-51)||(30326634-30326673)
chr1 (12-51)||(37929556-37929595)
chr1 (9-55)||(46899196-46899242)
chr1 (12-54)||(50062341-50062383)
chr1 (12-54)||(50062868-50062910)
chr1 (12-57)||(13295273-13295318)
chr1 (12-56)||(28325048-28325092)
chr1 (12-55)||(46899847-46899890)
chr1 (12-57)||(5734956-5735001)
[»] scaffold0771 (1 HSPs)
scaffold0771 (12-57)||(1058-1103)
[»] chr7 (45 HSPs)
chr7 (12-57)||(4226263-4226308)
chr7 (12-57)||(18087583-18087628)
chr7 (9-57)||(5455962-5456010)
chr7 (12-56)||(10600193-10600237)
chr7 (12-56)||(25628616-25628660)
chr7 (12-56)||(42618049-42618093)
chr7 (12-69)||(12643238-12643295)
chr7 (12-57)||(45914662-45914707)
chr7 (12-56)||(18086427-18086471)
chr7 (12-56)||(25453372-25453416)
chr7 (12-56)||(25628722-25628766)
chr7 (12-56)||(32068234-32068278)
chr7 (12-56)||(32934486-32934530)
chr7 (12-56)||(33808461-33808505)
chr7 (12-56)||(42618155-42618199)
chr7 (12-56)||(46205553-46205597)
chr7 (9-57)||(47945483-47945531)
chr7 (9-57)||(47950913-47950961)
chr7 (12-55)||(23058674-23058717)
chr7 (13-56)||(32934592-32934635)
chr7 (12-54)||(22661495-22661537)
chr7 (12-54)||(27480125-27480167)
chr7 (12-54)||(27480667-27480709)
chr7 (12-54)||(43124400-43124442)
chr7 (12-57)||(12228523-12228568)
chr7 (12-57)||(13384640-13384685)
chr7 (12-57)||(23058567-23058612)
chr7 (12-53)||(25453266-25453307)
chr7 (12-57)||(47558168-47558213)
chr7 (9-53)||(4227093-4227137)
chr7 (12-56)||(22081697-22081741)
chr7 (12-56)||(28890717-28890761)
chr7 (12-56)||(32068340-32068384)
chr7 (11-55)||(33828219-33828263)
chr7 (12-54)||(18855902-18855944)
chr7 (12-57)||(12644050-12644095)
chr7 (12-57)||(32687535-32687580)
chr7 (12-57)||(32688463-32688508)
chr7 (12-56)||(27138185-27138229)
chr7 (12-52)||(29144232-29144272)
chr7 (12-56)||(43266404-43266448)
chr7 (12-52)||(43266514-43266554)
chr7 (12-52)||(46204559-46204599)
chr7 (17-57)||(47558984-47559024)
chr7 (12-48)||(22081811-22081847)
[»] chr2 (20 HSPs)
chr2 (12-57)||(6588821-6588866)
chr2 (12-57)||(8710606-8710651)
chr2 (12-56)||(8710712-8710756)
chr2 (12-56)||(11830502-11830546)
chr2 (12-56)||(15604583-15604627)
chr2 (9-57)||(25624350-25624398)
chr2 (12-57)||(15604477-15604522)
chr2 (12-57)||(25623426-25623471)
chr2 (12-56)||(8342325-8342369)
chr2 (12-54)||(20983181-20983223)
chr2 (12-54)||(21103219-21103261)
chr2 (12-54)||(29957955-29957997)
chr2 (12-54)||(29958467-29958509)
chr2 (12-53)||(41587372-41587413)
chr2 (9-57)||(25230237-25230285)
chr2 (12-56)||(41588302-41588346)
chr2 (12-54)||(20982662-20982704)
chr2 (12-54)||(39936495-39936537)
chr2 (14-53)||(202605-202644)
chr2 (9-54)||(199143-199188)
[»] scaffold0328 (2 HSPs)
scaffold0328 (12-56)||(11278-11322)
scaffold0328 (12-56)||(11384-11428)
[»] chr6 (26 HSPs)
chr6 (12-56)||(7905487-7905531)
chr6 (12-56)||(12065358-12065402)
chr6 (12-56)||(15913792-15913836)
chr6 (12-56)||(21836168-21836212)
chr6 (9-54)||(4117467-4117512)
chr6 (12-57)||(8089581-8089626)
chr6 (12-56)||(7160942-7160986)
chr6 (12-56)||(7905381-7905425)
chr6 (12-56)||(22503018-22503062)
chr6 (12-56)||(31407016-31407060)
chr6 (12-56)||(31407122-31407166)
chr6 (12-55)||(20651148-20651191)
chr6 (12-54)||(14657129-14657171)
chr6 (12-54)||(33400104-33400146)
chr6 (12-53)||(7161051-7161092)
chr6 (12-56)||(6517640-6517684)
chr6 (12-56)||(10781402-10781446)
chr6 (12-56)||(15913686-15913730)
chr6 (12-56)||(21836274-21836318)
chr6 (12-56)||(22502912-22502956)
chr6 (12-54)||(1661350-1661392)
chr6 (12-54)||(14656618-14656660)
chr6 (9-54)||(4116934-4116979)
chr6 (12-55)||(13379729-13379772)
chr6 (19-54)||(33400874-33400909)
chr6 (12-54)||(33401045-33401088)
[»] chr5 (23 HSPs)
chr5 (12-56)||(17544186-17544230)
chr5 (12-56)||(17544292-17544336)
chr5 (12-56)||(20153056-20153100)
chr5 (12-57)||(11741762-11741807)
chr5 (12-53)||(21287904-21287945)
chr5 (12-57)||(22869743-22869788)
chr5 (12-57)||(22870379-22870424)
chr5 (9-54)||(36476900-36476945)
chr5 (12-56)||(20153162-20153206)
chr5 (12-54)||(20072259-20072301)
chr5 (12-54)||(20072789-20072831)
chr5 (9-55)||(21257408-21257454)
chr5 (12-54)||(36477296-36477338)
chr5 (12-54)||(39181195-39181237)
chr5 (12-54)||(39181716-39181758)
chr5 (12-56)||(22298680-22298724)
chr5 (12-56)||(33871477-33871521)
chr5 (12-54)||(16533545-16533587)
chr5 (12-48)||(33871590-33871626)
chr5 (12-54)||(20857070-20857113)
chr5 (12-54)||(20857466-20857509)
chr5 (12-54)||(16533031-16533073)
chr5 (12-56)||(20152919-20152962)
[»] scaffold0006 (2 HSPs)
scaffold0006 (12-57)||(221927-221972)
scaffold0006 (12-56)||(222033-222077)
[»] scaffold0128 (1 HSPs)
scaffold0128 (12-52)||(19995-20035)
[»] scaffold0599 (1 HSPs)
scaffold0599 (14-51)||(2533-2570)
[»] scaffold0042 (1 HSPs)
scaffold0042 (12-51)||(12029-12068)
[»] scaffold0388 (2 HSPs)
scaffold0388 (12-53)||(12486-12527)
scaffold0388 (12-56)||(12377-12421)
[»] scaffold0775 (2 HSPs)
scaffold0775 (12-54)||(5100-5142)
scaffold0775 (12-53)||(6227-6268)


Alignment Details
Target: chr8 (Bit Score: 266; Significance: 1e-148; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 9 - 294
Target Start/End: Complemental strand, 34177263 - 34176979
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctcaaattaatcttcttcactccttcaagcttcccttgagaaacctaattcatta 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  34177263 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctcaaattaatcttcttcactccttcaagcttctct-gagaaacctaattcatta 34177165  T
Q  109 ttttcttctctgagaaatcatcaatctccctgcttcattctttttcttcaagtttccaaacagaacacatgcagcaaagcgatagtgaaaaaagaaagtg 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34177164 ttttcttctctgagaaatcatcaatctccctgcttcattctttttcttcaagtttccaaacagaacacatgcagcaaagcgatagtgaaaaaagaaagtg 34177065  T
Q  209 aaccaataaaggagaaggaagatgaaacctcaatccagacggaatcggtagtgcacgtggtggttgctggaggaaggagctgctcg 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  34177064 aaccaataaaggagaaggaagatgaaacctcaatccagacggaatcagtagtgcacgtggtggttgctggaggaaggagttgctcg 34176979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 35634387 - 35634342
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  35634387 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 35634342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 15230219 - 15230175
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  15230219 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 15230175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 15230071 - 15230114
Alignment:
Q  14 atcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  15230071 atcaaattagcaaaatggcatgggaatggacaaaaataccctca 15230114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 39474680 - 39474727
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  39474680 acatcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 39474727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 34214493 - 34214448
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  34214493 acatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 34214448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 2535843 - 2535795
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  2535843 acatcatcaaattagtaaaatggcatgggaatggacaaaaatacactca 2535795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 10445623 - 10445579
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  10445623 tcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 10445579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 25124851 - 25124807
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  25124851 tcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 25124807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 42945252 - 42945296
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  42945252 tcatcaaattagtaaaatggcatgggaatggacaaaaataccctc 42945296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 42945402 - 42945358
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  42945402 tcatcaaattagtaaaatggcatgggaatggacaaaaataccctc 42945358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 11761978 - 11762020
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  11761978 tcatcaaattagcaaaatagcatgggaatggacaaaaataccc 11762020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 34213902 - 34213944
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  34213902 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 34213944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 34665908 - 34665950
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  34665908 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 34665950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 21432831 - 21432872
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  21432831 tcatcaaattagcaaaatggcatggaaatggacaaaaatacc 21432872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 27500226 - 27500270
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||    
T  27500226 tcatcaaattagcaaaatgacatgagaatggacaaaaataccctc 27500270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 37542362 - 37542406
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||    
T  37542362 tcatcaaattaacaaaatggcatgggaatgaacaaaaataccctc 37542406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 44664646 - 44664690
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||    
T  44664646 tcatcaaattagcaaaatggcacgggaatggacaaaaatatcctc 44664690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 44664796 - 44664752
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||    
T  44664796 tcatcagattagcaaaatggcatgggaatggacaaaaatatcctc 44664752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 7294238 - 7294284
Alignment:
Q  11 atcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||    
T  7294238 atcatcaaattagcaaaatggcataagaatggacaaaaataacctca 7294284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 8997977 - 8997943
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaa 46  Q
    |||||||||||||||||||||||||||||||||||    
T  8997977 tcatcaaattagcaaaatggcatgggaatggacaa 8997943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 21432979 - 21432937
Alignment:
Q  14 atcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||| |||||||||||| ||||||||||||    
T  21432979 atcaaattagcaaaatgacatgggaatggataaaaataccctc 21432937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 34176579 - 34176621
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||| |||||| ||||||||||||||    
T  34176579 tcatcaaattagcaaaatggcttgggaaaggacaaaaataccc 34176621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 34666503 - 34666461
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  34666503 tcatcaaattagcaaaatggcatgagaattgacaaaaataccc 34666461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 2534830 - 2534875
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||| |||| ||| |||||||||||||    
T  2534830 acatcatcaaattagcaaaatggtatggaaattgacaaaaataccc 2534875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 41353861 - 41353820
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  41353861 tcatcaaattagcaaaatgacatgagaatggacaaaaatacc 41353820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 6471828 - 6471872
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||    
T  6471828 tcatcaaattagcaaaatgacatgggaatggataaaaatatcctc 6471872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 27500376 - 27500332
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||    
T  27500376 tcatcaaattagaaaaattgcatgggaatgggcaaaaataccctc 27500332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 38003593 - 38003637
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||| || | |||||||||||||||||||    
T  38003593 tcatcaaattagcaaaatggtatagaaatggacaaaaataccctc 38003637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 38003745 - 38003701
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    |||| |||||||||||||||||||||| |||| ||||||||||||    
T  38003745 acattatcaaattagcaaaatggcatgagaatagacaaaaatacc 38003701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 6471976 - 6471934
Alignment:
Q  14 atcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||| |||||| |||||||||| |||||||||||||||    
T  6471976 atcaaattaacaaaatagcatgggaattgacaaaaataccctc 6471934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 25124701 - 25124741
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatac 52  Q
    |||||||||||||||||||  |||||||| |||||||||||    
T  25124701 tcatcaaattagcaaaatgatatgggaattgacaaaaatac 25124741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 12 - 294
Target Start/End: Original strand, 32716387 - 32716668
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctcaaattaatcttcttcactccttcaagcttcccttgagaaacctaattcattattt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  32716387 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctcaaattaatcttcttcactccttcaagcttcccttgagaaacctgattcatt-ttt 32716485  T
Q  112 tcttctctgagaaatcatcaatctccctgcttcattctttttcttcaagtttccaaacagaacacatgcagcaaagcgatagtgaaaaaagaaagtgaac 211  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32716486 tcttccctgagaaatcatcaatctccctgcttcattctttttcttcaagtttccaaacagaacacatgcaacaaagcgatagtgaaaaaagaaagtgaac 32716585  T
Q  212 caataaaggagaaggaagatgaaacctcaatccagacggaatcggtagtgcacgtggtggttgctggaggaaggagctgctcg 294  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32716586 caataaaggagaaggaagatgaaacctcaatccagacggaattggtagtgcacgtggtggttgctggaggaaggagctgctcg 32716668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 40788557 - 40788603
Alignment:
Q  11 atcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  40788557 atcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 40788603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 13948918 - 13948963
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13948918 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 13948963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 3469338 - 3469382
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3469338 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 3469382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 3469488 - 3469444
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  3469488 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 3469444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 29118676 - 29118720
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29118676 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 29118720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 35643989 - 35644033
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  35643989 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 35644033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 40788708 - 40788664
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  40788708 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 40788664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 35759091 - 35759046
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  35759091 tcatcaaattagcaaaatggcatgagaatggacaaaaataccctca 35759046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 3596397 - 3596353
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  3596397 tcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 3596353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 29686079 - 29686123
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  29686079 tcatcaaattagcaaaatggcatgggaatggagaaaaataccctc 29686123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 41422110 - 41422154
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  41422110 tcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 41422154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 52032276 - 52032320
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  52032276 tcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 52032320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 52032427 - 52032383
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  52032427 tcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 52032383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 32306712 - 32306669
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  32306712 tcatcaaattagcaaaatggcataggaatggacaaaaataccct 32306669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 43105371 - 43105414
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  43105371 tcatcaaattagcaaaatggcatgggaattgacaaaaataccct 43105414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 47551628 - 47551675
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  47551628 acatcatcaaattagcaaaatggcatggaaatggacaaaattaccctc 47551675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 1756688 - 1756730
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  1756688 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 1756730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 2944051 - 2944093
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  2944051 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 2944093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 2944628 - 2944586
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  2944628 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 2944586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 11026594 - 11026552
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  11026594 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 11026552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 37249760 - 37249718
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  37249760 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 37249718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 43608773 - 43608727
Alignment:
Q  11 atcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||    
T  43608773 atcatcaaattagcaagatggcatggaaatggacaaaaataccctca 43608727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 45278682 - 45278724
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  45278682 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 45278724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 45279246 - 45279204
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  45279246 tcatcaaattagcaaaatgacatgggaatggacaaaaataccc 45279204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 48189061 - 48189019
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  48189061 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 48189019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 3596247 - 3596288
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  3596247 tcatcaaattagcaaaatggcatgagaatggacaaaaatacc 3596288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 9368591 - 9368546
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||    
T  9368591 tcatcaaattaacaaaatggcatgagaatggacaaaaataccctca 9368546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 11910839 - 11910876
Alignment:
Q  14 atcaaattagcaaaatggcatgggaatggacaaaaata 51  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11910839 atcaaattagcaaaatggcatgggaatggacaaaaata 11910876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 29192955 - 29192910
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  29192955 tcatcaaattagcaaaatgacatgggaattgacaaaaataccctca 29192910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 10307663 - 10307619
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||    
T  10307663 tcataaaattagcaaaattgcatgggaatggacaaaaataccctc 10307619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 29118826 - 29118782
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||| |||||||||||||||||||||| |||||||||||||||    
T  29118826 tcatcacattagcaaaatggcatgggaatagacaaaaataccctc 29118782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 29686224 - 29686185
Alignment:
Q  17 aaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  29686224 aaattagcaaaatggcatggaaatggacaaaaataccctc 29686185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 37778561 - 37778518
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    |||||||||||||||||||||||| |||| ||||||||||||||    
T  37778561 tcatcaaattagcaaaatggcatgagaatagacaaaaataccct 37778518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 1757266 - 1757224
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  1757266 tcatcaaattagcaaaatggcatgagaattgacaaaaataccc 1757224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 4322726 - 4322772
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    |||||||||||||| |||||| |||||||||||||||||||| ||||    
T  4322726 acatcatcaaattaacaaaatagcatgggaatggacaaaaatgccct 4322772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 32717067 - 32717025
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||| ||| |||||||||||||||||||    
T  32717067 tcatcaaattagcaaaatgacataggaatggacaaaaataccc 32717025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 37249337 - 37249379
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  37249337 tcatcaaattagcaaaatggcatggaaattgacaaaaataccc 37249379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 43105796 - 43105754
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||| ||||| |||||||||||||    
T  43105796 tcatcaaattagcaaaatggcattggaattgacaaaaataccc 43105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 48188516 - 48188558
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  48188516 tcatcaaattagcaaaatgccatgggaattgacaaaaataccc 48188558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 1078674 - 1078719
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||| |||||| |||||||||||||||||| ||||    
T  1078674 tcatcaaattagcaagatggcacgggaatggacaaaaatactctca 1078719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 6956387 - 6956432
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||| |||||| ||||||| ||||||||||||||||||||||||||    
T  6956387 tcataaaattaacaaaatgacatgggaatggacaaaaataccctca 6956432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 10294699 - 10294744
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||||    
T  10294699 tcatcaaattagcaaaatgacatggaaatgtacaaaaataccctca 10294744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 10294847 - 10294804
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||    
T  10294847 tcatcaaattaccaaa-tggcatgggaatggacaaaaataccctc 10294804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 32306562 - 32306606
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||    
T  32306562 tcatcaaattagcaaaatgacttgggaatggacaaaaatatcctc 32306606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 43998283 - 43998327
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||| |||||||||||||||||||| |||||||| ||||    
T  43998283 tcatcaaattcgcaaaatggcatgggaatggtcaaaaatatcctc 43998327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 43998433 - 43998389
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||    
T  43998433 tcatcaaattagcaaaatgccatgagaatggacaaaaatatcctc 43998389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 54
Target Start/End: Complemental strand, 42855596 - 42855553
Alignment:
Q  11 atcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||||||||||| |||||| ||| ||||||||||    
T  42855596 atcatcaaattagcaaaatggcttgggaaaggataaaaataccc 42855553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 11026075 - 11026117
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||||||| |||||| ||| |||||||||||||    
T  11026075 tcatcaaattagcaaaatcgcatggaaattgacaaaaataccc 11026117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 41989575 - 41989541
Alignment:
Q  15 tcaaattagcaaaatggcatgggaatggacaaaaa 49  Q
    ||||||||||||||||||||| |||||||||||||    
T  41989575 tcaaattagcaaaatggcatgagaatggacaaaaa 41989541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 29192173 - 29192218
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||| |||||||||||||| |||| |||| ||||||||||||||||    
T  29192173 tcattaaattagcaaaatgacatgagaattgacaaaaataccctca 29192218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 41558175 - 41558138
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaa 46  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  41558175 acatcatcaaattatcaaaatggtatgggaatggacaa 41558138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 245; Significance: 1e-136; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 12 - 296
Target Start/End: Original strand, 23455092 - 23455375
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctcaaattaatcttcttcactccttcaagcttcccttgagaaacctaattcattattt 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  23455092 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctcaaattaatcttcttcactccttcaagcttcccttgagaaacctgattcatt-ttt 23455190  T
Q  112 tcttctctgagaaatcatcaatctccctgcttcattctttttcttcaagtttccaaacagaacacatgcagcaaagcgatagtgaaaaaagaaagtgaac 211  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  23455191 tcttcaatgagaaatcatcaatctccctgcttcattctttttcttcaagtttccaaacagaacacatgcaataaagcgatagtgaaaaaagaaaatgaac 23455290  T
Q  212 caataaaggagaaggaagatgaaacctcaatccagacggaatcggtagtgcacgtggtggttgctggaggaaggagctgctcgtg 296  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  23455291 caataaaggagaaggaagatgaaacctcaatccagacggaattggtagtgcacgtggtggttgttggaggaaggagctgctcgtg 23455375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 27069048 - 27069092
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  27069048 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 27069092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 27069198 - 27069154
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  27069198 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 27069154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 39666914 - 39666958
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  39666914 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 39666958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 40316956 - 40316908
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40316956 acatcatcaaattagcaaaatgacatgggaatggacaaaaataccctca 40316908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 40327030 - 40326982
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40327030 acatcatcaaattagcaaaatgacatgggaatggacaaaaataccctca 40326982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 50503963 - 50504007
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  50503963 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 50504007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 51859542 - 51859589
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  51859542 acatcatcaaattagcaaaatggcatgagaatggacaaaaataccctc 51859589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 10408027 - 10408072
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  10408027 tcatcaaattagcaaaatggcatggaaatggacaaaaataccctca 10408072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 32063626 - 32063581
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  32063626 tcatcaaattagcaaaatggcatgagaatggacaaaaataccctca 32063581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 11524087 - 11524131
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  11524087 tcatcaaattagcaaaatggcatgggaatagacaaaaataccctc 11524131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 22718227 - 22718183
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  22718227 tcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 22718183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 39701047 - 39701091
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  39701047 tcatcaaattagcaaaatggcatgggaatggacaaaaacaccctc 39701091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 45463211 - 45463255
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  45463211 tcatcaaattagcaaaatagcatgggaatggacaaaaataccctc 45463255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 45463361 - 45463317
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  45463361 tcatcaaattagcaaaatggcatgggaatggacaaaaacaccctc 45463317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 50504113 - 50504069
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  50504113 tcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 50504069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 52573366 - 52573410
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  52573366 tcatcaaattagcaaaatggcatgagaatggacaaaaataccctc 52573410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 54858848 - 54858804
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  54858848 tcatcaaattagcaaaatggcatgtgaatggacaaaaataccctc 54858804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 147457 - 147500
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  147457 tcatcaaattagcaaaatggcatgggaatggacaaaaatgccct 147500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 52815801 - 52815844
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  52815801 tcatcaaattagcaaaatggcatgggaattgacaaaaataccct 52815844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 23455651 - 23455609
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  23455651 tcatcaaattagcaaaatgacatgggaatggacaaaaataccc 23455609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 38982558 - 38982516
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  38982558 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 38982516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 52816385 - 52816343
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  52816385 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 52816343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 56556720 - 56556762
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  56556720 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 56556762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 30641655 - 30641700
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||    
T  30641655 tcatcaaattagcaaaatgtcatgggaatggacaaaattaccctca 30641700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 39667064 - 39667023
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  39667064 tcatcaaattagcaaaatggcatgagaatggacaaaaatacc 39667023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 51859694 - 51859650
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  51859694 tcatcaaattagcaaaatggcatgggaatggac-aaaataccctca 51859650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 54858698 - 54858743
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||    
T  54858698 tcatcaaattagcaaaatggcatgggaacagacaaaaataccctca 54858743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 9731500 - 9731456
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||    
T  9731500 tcatcaaattagcaaaatggcatgggaatgaacaaaaatatcctc 9731456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 22986989 - 22987033
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||    
T  22986989 tcatcaaattagcaaaatgacatgggaatagacaaaaataccctc 22987033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 27891722 - 27891766
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||    
T  27891722 tcatcaaattagcaaaatgacatgggaatggacaaaaatatcctc 27891766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 39701197 - 39701153
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  39701197 tcatcaaattagcaaaatagtatgggaatggacaaaaataccctc 39701153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 52573516 - 52573472
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  52573516 tcatcaaattagcaatatggcatgagaatggacaaaaataccctc 52573472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 10408180 - 10408133
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  10408180 acatcatcaaattagcaaaatgatatgagaatggacaaaaataccctc 10408133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 11524232 - 11524193
Alignment:
Q  17 aaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  11524232 aaattagcaaaatggcatgggaatggacaaaaatatcctc 11524193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 3032722 - 3032760
Alignment:
Q  14 atcaaattagcaaaatggcatgggaatggacaaaaatac 52  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  3032722 atcaaattagcaaaatggcataggaatggacaaaaatac 3032760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 50751791 - 50751745
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    |||||||||||||| |||||| |||||||||||||||||||| ||||    
T  50751791 acatcatcaaattaacaaaatagcatgggaatggacaaaaatgccct 50751745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 56557287 - 56557245
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||| ||||| |||||||||||||    
T  56557287 tcatcaaattagcaaaatggcataggaattgacaaaaataccc 56557245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 5818060 - 5818024
Alignment:
Q  15 tcaaattagcaaaatggcatgggaatggacaaaaata 51  Q
    |||||||||||||||||||||||||| ||||||||||    
T  5818060 tcaaattagcaaaatggcatgggaatagacaaaaata 5818024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 148045 - 148002
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||    
T  148045 tcatcaaattagcaaaatggcatgaaaatggacaaaaatgccct 148002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 55867404 - 55867362
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||    
T  55867404 tcatcaaattagcaaaatgacattggaattgacaaaaataccc 55867362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 11448022 - 11447977
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||| ||||||||||||  ||| |||||||||||||    
T  11448022 acatcatcaaattaacaaaatggcatgaaaattgacaaaaataccc 11447977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 22718077 - 22718121
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||| ||  |||| |||||||||||||||    
T  22718077 tcatcaaattagcaaaatggtataagaatagacaaaaataccctc 22718121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 22987139 - 22987095
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||| ||  |||| |||||||||||||||    
T  22987139 tcatcaaattagcaaaatggtataagaatagacaaaaataccctc 22987095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 38813695 - 38813731
Alignment:
Q  15 tcaaattagcaaaatggcatgggaatggacaaaaata 51  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  38813695 tcaaattagcaaaatgacatgggaattgacaaaaata 38813731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 5734147 - 5734204
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctcaaattaatcttct 69  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  5734147 tcatcaaattaacaaaatggcatgggaatggacaaaaataccctcaaattcatcttct 5734204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 49955482 - 49955529
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49955482 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 49955529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 7371428 - 7371472
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7371428 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 7371472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 8898655 - 8898699
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8898655 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 8898699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 17189092 - 17189136
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17189092 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 17189136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 31058345 - 31058301
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  31058345 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 31058301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 35040902 - 35040858
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  35040902 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 35040858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 40714582 - 40714626
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  40714582 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 40714626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 49955635 - 49955591
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  49955635 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 49955591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 35038593 - 35038638
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  35038593 tcatcaaattagcaaaatggcatgggaatggacaaaaatatcctca 35038638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 46282758 - 46282713
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  46282758 acatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 46282713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 28324942 - 28324986
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  28324942 tcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 28324986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 45749980 - 45750024
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  45749980 tcatcaaattagcaaaatggcatgagaatggacaaaaataccctc 45750024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 45750130 - 45750091
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaata 51  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  45750130 tcatcaaattagcaaaatggcatgggaatggacaaaaata 45750091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 20760794 - 20760752
Alignment:
Q  11 atcatcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  20760794 atcatcaaattagcaaaatgacatgggaatggacaaaaatacc 20760752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 46282209 - 46282251
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  46282209 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 46282251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 49093179 - 49093221
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  49093179 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 49093221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 49093775 - 49093733
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  49093775 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 49093733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 32132442 - 32132487
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||    
T  32132442 tcatcaaattagcaaaatgtcatgggaatggacaaaaataacctca 32132487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 8898805 - 8898761
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| || ||||||||||||||||||||||    
T  8898805 tcatcaaattagcaaaatgacacgggaatggacaaaaataccctc 8898761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 12905947 - 12905903
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||    
T  12905947 tcatcaaattaacaaaatggcatgagaatggacaaaaataccctc 12905903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 40714731 - 40714688
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  40714731 tcatcaaattagcaaaatggcat-ggaatggacaaaaataccctc 40714688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 30326634 - 30326673
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaata 51  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  30326634 tcatcaaattagcaaaatgacatgggaatggacaaaaata 30326673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 37929556 - 37929595
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaata 51  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  37929556 tcatcaaattagcaaaatggcatgagaatggacaaaaata 37929595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 46899196 - 46899242
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    |||||||||||| | ||||||||||||||||||||||||||| ||||    
T  46899196 acatcatcaaataaacaaaatggcatgggaatggacaaaaatgccct 46899242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 50062341 - 50062383
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||| ||||||||| |||||||||||||    
T  50062341 tcatcaaattagcaaaatgacatgggaattgacaaaaataccc 50062383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 50062910 - 50062868
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  50062910 tcatcaaattagcaaaatggcatgagaattgacaaaaataccc 50062868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 13295273 - 13295318
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  13295273 tcatcaaattagcaaaatgacatggaaatagacaaaaataccctca 13295318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 28325092 - 28325048
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||    
T  28325092 tcatcaaattagcaaaatgacataggaatggacaaaaatatcctc 28325048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 46899890 - 46899847
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||    
T  46899890 tcatcaaattagtaaaatggcatgggaatgaacaaaaatgccct 46899847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 5735001 - 5734956
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||| |||||||||||| |||| ||||||||| ||||||    
T  5735001 tcatcaaattaacaaaatggcatgagaatagacaaaaatgccctca 5734956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 1058 - 1103
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1058 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 1103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 4226263 - 4226308
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4226263 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 4226308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 18087628 - 18087583
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18087628 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 18087583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 5455962 - 5456010
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5455962 acatcatcaaattagcaaaatggcatgagaatggacaaaaataccctca 5456010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 10600237 - 10600193
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  10600237 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 10600193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 25628616 - 25628660
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  25628616 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 25628660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 42618049 - 42618093
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  42618049 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 42618093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 12643238 - 12643295
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctcaaattaatcttct 69  Q
    |||||||||||||  |||||||| |||||||||||||||||||||||||| |||||||    
T  12643238 tcatcaaattagcttaatggcataggaatggacaaaaataccctcaaattcatcttct 12643295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 45914662 - 45914707
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  45914662 tcatcaaattagcaaaatgacatgggaatggacaaaaataccctca 45914707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 18086427 - 18086471
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  18086427 tcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 18086471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 25453416 - 25453372
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  25453416 tcatcaaattagcaaaatggcatgggaatggacaaaaatatcctc 25453372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 25628766 - 25628722
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  25628766 tcatcaaattagcaaaatggcatgggaatggacaaaactaccctc 25628722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 32068234 - 32068278
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  32068234 tcatcaaattagcaaaatggcatgggaaaggacaaaaataccctc 32068278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 32934486 - 32934530
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  32934486 tcatcaaattagcaaaatggcataggaatggacaaaaataccctc 32934530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 33808461 - 33808505
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  33808461 tcatcaaattagcaaaatgggatgggaatggacaaaaataccctc 33808505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 42618199 - 42618155
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  42618199 tcatcaaattagcaaaatggcatgggaatggacaaaaatatcctc 42618155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 46205597 - 46205553
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  46205597 tcatcaaattaggaaaatggcatgggaatggacaaaaataccctc 46205553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 47945483 - 47945531
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  47945483 acatcatcaaattaacaaaatggcataggaatggacaaaaataccctca 47945531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 47950913 - 47950961
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  47950913 acatcatcaaattaacaaaatggcataggaatggacaaaaataccctca 47950961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 23058717 - 23058674
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  23058717 tcatcaaattaacaaaatggcatgggaatggacaaaaataccct 23058674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 32934635 - 32934592
Alignment:
Q  13 catcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  32934635 catcaaattagcaaaatgacatgggaatggacaaaaataccctc 32934592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 22661495 - 22661537
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  22661495 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 22661537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 27480125 - 27480167
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  27480125 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 27480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 27480709 - 27480667
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  27480709 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 27480667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 43124442 - 43124400
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  43124442 tcatcaaattagcaaaatgacatgggaatggacaaaaataccc 43124400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 12228523 - 12228568
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||    
T  12228523 tcatcaaattaacaaaatggcatgagaatggacaaaaataccctca 12228568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 13384640 - 13384685
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  13384640 tcatcaaattaacaaaatgacatgggaatggacaaaaataccctca 13384685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 23058567 - 23058612
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  23058567 tcatcaaattagcaaaatgtcatgggaatggacaaaaatacactca 23058612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 25453266 - 25453307
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  25453266 tcatcaaattagcaaaaaggcatgggaatggacaaaaatacc 25453307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 47558168 - 47558213
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||    
T  47558168 tcatcaaattagcaaaatgtcatgggaatggataaaaataccctca 47558213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 4227137 - 4227093
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||    
T  4227137 acatcataaaattagcaaaatggcatgagaatggacaaaaatacc 4227093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 22081697 - 22081741
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  22081697 tcatcaaattagcgaaatggcatgagaatggacaaaaataccctc 22081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 28890717 - 28890761
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||  |||||||||||||||||||    
T  28890717 tcatcaaattagcaaaatggcatgaaaatggacaaaaataccctc 28890761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 32068384 - 32068340
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||    
T  32068384 tcatcaaattagcaaaatggcatgggaattgacaaaaagaccctc 32068340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 33828263 - 33828219
Alignment:
Q  11 atcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    ||||||||| || ||||||||||||||||||||||||||||||||    
T  33828263 atcatcaaactaacaaaatggcatgggaatggacaaaaataccct 33828219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 18855944 - 18855902
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  18855944 tcatcaaattagcaaaatagcatgggaaaggacaaaaataccc 18855902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 12644095 - 12644050
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||||    
T  12644095 tcatcaaattagcaaaatggcatgagaatgaacaaaaatgccctca 12644050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 32687535 - 32687580
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||||||| |||||||||||||| ||||||| ||||    
T  32687535 tcatcaaattagcaaaattgcatgggaatggaccaaaatacactca 32687580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 32688508 - 32688463
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||||||| |||||| ||| ||||||||||||||||    
T  32688508 tcatcaaattagcaaaattgcatggaaatagacaaaaataccctca 32688463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 27138229 - 27138185
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||    
T  27138229 tcatcaaattaacaaaataacatgggaatggacaaaaataccctc 27138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 29144272 - 29144232
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatac 52  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  29144272 tcatcaaattagcaaaattgtatgggaatggacaaaaatac 29144232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 43266404 - 43266448
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  43266404 tcatcaaattaacaaaatggtatgggaatgaacaaaaataccctc 43266448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 43266554 - 43266514
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatac 52  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  43266554 tcatcaaattagcaaaatgacatgagaatggacaaaaatac 43266514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 46204559 - 46204599
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatac 52  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  46204559 tcatcaaattagtaaaatggcatgggaatgaacaaaaatac 46204599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 47559024 - 47558984
Alignment:
Q  17 aaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  47559024 aaattagcaaaatgacatggaaatggacaaaaataccctca 47558984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 22081847 - 22081811
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaa 48  Q
    ||||||||||||| |||||| ||||||||||||||||    
T  22081847 tcatcaaattagccaaatggtatgggaatggacaaaa 22081811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 6588821 - 6588866
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6588821 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 6588866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 8710606 - 8710651
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  8710606 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 8710651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 8710756 - 8710712
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8710756 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 8710712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 11830502 - 11830546
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11830502 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 11830546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 15604627 - 15604583
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  15604627 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 15604583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 25624398 - 25624350
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25624398 acatcatcaaattaacaaaatggcatgggaatggacaaaaataccctca 25624350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 15604477 - 15604522
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  15604477 tcatgaaattagcaaaatggcatgggaatggacaaaaataccctca 15604522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 25623426 - 25623471
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  25623426 tcatcaaattaacaaaatggcatgggaatggacaaaaataccctca 25623471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 8342325 - 8342369
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  8342325 tcatcaaattagcaaaatggcatgggaattgacaaaaataccctc 8342369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 20983223 - 20983181
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  20983223 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 20983181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 21103219 - 21103261
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  21103219 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 21103261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 29957955 - 29957997
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  29957955 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 29957997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 29958509 - 29958467
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  29958509 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 29958467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 41587372 - 41587413
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  41587372 tcatcaaattagcaaaattgcatgggaatggacaaaaatacc 41587413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 25230237 - 25230285
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  25230237 acatcatcagattggcaaaatggcatgcgaatggacaaaaataccctca 25230285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 41588346 - 41588302
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||    
T  41588346 tcatcaaattagcaaaatggcatggaaattgacaaaaataccctc 41588302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 20982662 - 20982704
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  20982662 tcatcaaattagcaaaatggtatgggaattgacaaaaataccc 20982704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 39936537 - 39936495
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||| || ||||||||||||||    
T  39936537 tcatcaaattagcaaaatggcatggaaaaggacaaaaataccc 39936495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 202644 - 202605
Alignment:
Q  14 atcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  202644 atcaaattagcaaaatggcatgagaatagacaaaaatacc 202605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 199143 - 199188
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||| |||||  ||||| ||||||||||||||||||    
T  199143 acatcatcaaattaacaaaagagcatgcgaatggacaaaaataccc 199188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 11278 - 11322
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11278 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 11322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 11428 - 11384
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11428 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 11384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 7905531 - 7905487
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7905531 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 7905487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 12065358 - 12065402
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12065358 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 12065402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 15913836 - 15913792
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  15913836 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 15913792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 21836168 - 21836212
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  21836168 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 21836212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 4117512 - 4117467
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  4117512 acatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 4117467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 8089581 - 8089626
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  8089581 tcatcaaattaacaaaatggcatgggaatggacaaaaataccctca 8089626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 7160942 - 7160986
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  7160942 tcatcaaattagcaaaatagcatgggaatggacaaaaataccctc 7160986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 7905381 - 7905425
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  7905381 tcatcaaattagcaaaatggcacgggaatggacaaaaataccctc 7905425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 22503062 - 22503018
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  22503062 tcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 22503018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 31407016 - 31407060
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  31407016 tcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 31407060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 31407166 - 31407122
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  31407166 tcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 31407122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 20651148 - 20651191
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  20651148 tcatcaaattagcaaaatggcatgggaatggacaaaaatgccct 20651191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 14657171 - 14657129
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  14657171 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 14657129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 33400104 - 33400146
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  33400104 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 33400146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 7161092 - 7161051
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  7161092 tcatcaaattagcaaaattgcatgggaatggacaaaaatacc 7161051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 6517640 - 6517684
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||    
T  6517640 tcatcaaattagcaaaatggcatgggaatgaacaaaaatagcctc 6517684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 10781446 - 10781402
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||    
T  10781446 tcatcaaattcgcaaaatggcatgggaatggacaaaaatatcctc 10781402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 15913686 - 15913730
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||    
T  15913686 tcatcaaattagcaaaatggcatggaaattgacaaaaataccctc 15913730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 21836318 - 21836274
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||    
T  21836318 tcatcaaattaacaaaatggcatgggaatggacaaaaatatcctc 21836274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 22502912 - 22502956
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||    
T  22502912 tcatcaaattagcaaaatggtatgagaatggacaaaaataccctc 22502956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 1661392 - 1661350
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  1661392 tcatcaaattatcaaaatggcatgggaattgacaaaaataccc 1661350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 14656618 - 14656660
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||| |||||||||||||||| |||||||||||||    
T  14656618 tcatcaaattagtaaaatggcatgggaattgacaaaaataccc 14656660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 4116934 - 4116979
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||||    
T  4116934 acattatcaaattagcaaaatggcgtgggaattgacaaaaataccc 4116979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 13379772 - 13379729
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||    
T  13379772 tcatcaaattagcaaaatggtttgggaatggacaaaaatgccct 13379729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 54
Target Start/End: Complemental strand, 33400909 - 33400874
Alignment:
Q  19 attagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||||||||||| |||||||||||||    
T  33400909 attagcaaaatggcatgggaattgacaaaaataccc 33400874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 33401088 - 33401045
Alignment:
Q  12 tcatcaaattagcaaaa-tggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||| |||||||||||| |||||||||||||    
T  33401088 tcatcaaattagcaaaaatggcatgggaattgacaaaaataccc 33401045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 17544186 - 17544230
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17544186 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 17544230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 17544336 - 17544292
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17544336 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 17544292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 20153056 - 20153100
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20153056 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 20153100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 11741807 - 11741762
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  11741807 tcatcaaattagcaaaatggcattggaatggacaaaaataccctca 11741762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 21287945 - 21287904
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  21287945 tcatcaaattagcaaaatggcatgggaatggacaaaaatacc 21287904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 22869743 - 22869788
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  22869743 tcatcaaattagcaaaatggcatgagaatggacaaaaataccctca 22869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 22870424 - 22870379
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  22870424 tcatcaaattagcaaaatgacatgggaatggacaaaaataccctca 22870379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 36476900 - 36476945
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  36476900 acatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 36476945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 20153206 - 20153162
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  20153206 tcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 20153162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 20072259 - 20072301
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  20072259 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 20072301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 20072831 - 20072789
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  20072831 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 20072789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 21257454 - 21257408
Alignment:
Q  9 acatcatcaaattagcaaaatggcatgggaatggacaaaaataccct 55  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||    
T  21257454 acatcatcaaattagcaaaatggcatgagaatggacaaaaatgccct 21257408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 36477338 - 36477296
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  36477338 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 36477296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 39181195 - 39181237
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  39181195 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 39181237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 39181758 - 39181716
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  39181758 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 39181716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 22298680 - 22298724
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||    
T  22298680 tcatcaaattagcaaaatgacatgggaattgacaaaaataccctc 22298724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 33871477 - 33871521
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||| |||||||||||||||| |||||||||||||||||||    
T  33871477 tcatcaaactagcaaaatggcatggaaatggacaaaaataccctc 33871521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 16533587 - 16533545
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  16533587 tcattaaattagcaaaatggcatgggaattgacaaaaataccc 16533545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 33871626 - 33871590
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaa 48  Q
    ||||||||||||||||||| |||||||||||||||||    
T  33871626 tcatcaaattagcaaaatgacatgggaatggacaaaa 33871590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 20857070 - 20857113
Alignment:
Q  12 tcatcaaattagcaaaa-tggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||| |||||||||||| |||||||||||||    
T  20857070 tcatcaaattagcaaaaatggcatgggaattgacaaaaataccc 20857113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 20857509 - 20857466
Alignment:
Q  12 tcatcaaattagcaaaa-tggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||| |||||||||||| |||||||||||||    
T  20857509 tcatcaaattagcaaaaatggcatgggaattgacaaaaataccc 20857466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 16533031 - 16533073
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    |||| ||||||||||||||||||||||||  ||||||||||||    
T  16533031 tcattaaattagcaaaatggcatgggaattcacaaaaataccc 16533073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 20152919 - 20152962
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||    
T  20152919 tcatcaaattagcaaa-tggtatgggaatgaacaaaaataccctc 20152962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 221927 - 221972
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 57  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  221927 tcatcaaattagcaaaatggcatgggaatgaacaaaaataccctca 221972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 222077 - 222033
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  222077 tcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 222033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 19995 - 20035
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatac 52  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19995 tcatcaaattagcaaaatggcatgggaatggacaaaaatac 20035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 2533 - 2570
Alignment:
Q  14 atcaaattagcaaaatggcatgggaatggacaaaaata 51  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2533 atcaaattagcaaaatggcatgggaatggacaaaaata 2570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 12068 - 12029
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaata 51  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  12068 tcatcaaattagcaaaatggcatgagaatggacaaaaata 12029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 12527 - 12486
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  12527 tcatcaaattagcaaaatgacatgggaatagacaaaaatacc 12486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 12377 - 12421
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 56  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||    
T  12377 tcatcaaattagcaaaatgacatggaaatggacaaaaatatcctc 12421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 5100 - 5142
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaataccc 54  Q
    ||||||||||||||||||| ||||| || ||||||||||||||    
T  5100 tcatcaaattagcaaaatgacatggaaaaggacaaaaataccc 5142  T

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Target: scaffold0775; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 6268 - 6227
Alignment:
Q  12 tcatcaaattagcaaaatggcatgggaatggacaaaaatacc 53  Q
    |||||||||||||||| |||||| |||| |||||||||||||    
T  6268 tcatcaaattagcaaagtggcataggaaaggacaaaaatacc 6227  T

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