View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3683_high_35 (Length: 251)
Name: NF3683_high_35
Description: NF3683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3683_high_35 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 9 - 251
Target Start/End: Complemental strand, 17196703 - 17196461
Alignment:
| Q |
9 |
agcacagagcgtgagaaatggagacaccaccctcaaccggcgccgtgaagaagaaggagacaagaggacgcaaacctaaacccaaggaagacaagagaga |
108 |
Q |
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| T |
17196703 |
agcacagagagtgagaaatggagacaccaccctcaaccggcgccgtgaagaagaaggagacaagaggacgcaaacctaaacccaaggaagacaagagaga |
17196604 |
T |
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| Q |
109 |
agaaccatcacaagtgaagacaccgagagaatcgaagaaggaaaagcaacagcaacagcttcatcagcagcagcaacaacaagcttctgttgatgagaag |
208 |
Q |
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| T |
17196603 |
agaaccatcacaagtgaagtcaccgagagaatcgaagaaggaaaagcaacagcaacagcttcatcagcagcagcaacaacaagcttctgttgatgagaag |
17196504 |
T |
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| Q |
209 |
tactctcaatggaaatctcttgttcctgttctttatgattggc |
251 |
Q |
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| T |
17196503 |
tactctcaatggaaatctcttgttcctgttctttatgattggc |
17196461 |
T |
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