View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3683_high_37 (Length: 247)
Name: NF3683_high_37
Description: NF3683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3683_high_37 |
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Alignment Details
Target: chr7 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 38982195 - 38981969
Alignment:
| Q |
1 |
ttacataattctttgaccaaaccgcagcatacnnnnnnnntataggaacaacaatcctgttttttccggccaagagagaatttaagtggctaagaggtat |
100 |
Q |
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| T |
38982195 |
ttacataattctttgaccaaaccgcagcatacaaaaaaaatacaggaacaacaatcctgttttttccggccaagagagaatttaagtggctaagaggtat |
38982096 |
T |
|
| Q |
101 |
ttcgtagtcccatcgtactaaaatttcttgcgagatatagcactacccttttactattaattaactcccaatcgaaatatcaaccataaaactcccttcc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||| |
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| T |
38982095 |
ttcgtagtcccatcgtactaaaatttcttgcgagatatagcactaccgttttacta----ttaactcccaatcaaaatatcaaccataaaactcccttcc |
38982000 |
T |
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| Q |
201 |
ttagaaactattagcaaccaatcgagctatc |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
38981999 |
ttagaaactattagcaaccaatcgagctatc |
38981969 |
T |
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