View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3683_low_43 (Length: 234)
Name: NF3683_low_43
Description: NF3683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3683_low_43 |
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Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 220
Target Start/End: Original strand, 16836508 - 16836710
Alignment:
| Q |
18 |
acttgcatgttgactcaaaatcctcaattgtctttgaggaattaatgcaactattaaactttccatacagtgaaggatatgcatggtaaatatgagccag |
117 |
Q |
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| T |
16836508 |
acttgcatgttgactcaaaatcctcaactgtctttgaggaattaatgcaactattaaactttccatacaatgaaggatatgcatggtaaatatgagccaa |
16836607 |
T |
|
| Q |
118 |
tctttcttgactttctcgcaaaatgtgccatttacagatacagtggcgagtttctggaaacacttgcgcaacagcagcctttatgactccatcttggtct |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16836608 |
tctttcttgactttctcgcaaaatgtgccatttacagatacagtggcgagtttctggaaacacttgcgcaacagcagcctttatgactccatcttggtct |
16836707 |
T |
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| Q |
218 |
gtg |
220 |
Q |
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||| |
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| T |
16836708 |
gtg |
16836710 |
T |
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