View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3683_low_45 (Length: 217)
Name: NF3683_low_45
Description: NF3683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3683_low_45 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 38345359 - 38345558
Alignment:
| Q |
1 |
aagaataagaggtttaaaattaagtagtaatgaatgaatatgcgtcgaaaatctaaacatggccccctttcttttctaccctttattagcactatttttt |
100 |
Q |
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| T |
38345359 |
aagaataagaggtttaaaattaagtagtaatgaatgaatatgcgtcgaaaatctaaacatggccccctttcttttcttccctttattagcactatttttt |
38345458 |
T |
|
| Q |
101 |
gttcttgttccagaacccaataattgtagcctcggtgactttctgtccctcttagtaccctcttgaattgttcaactcacaaccctatatctgtttgtct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38345459 |
gttcttgttccagaacccaataattgtagcctcggtgactttctgtccctcttagtaccctcttgaattgttcaactcacaaccctatatctgtttgtct |
38345558 |
T |
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