View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3686_high_31 (Length: 238)
Name: NF3686_high_31
Description: NF3686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3686_high_31 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 43 - 238
Target Start/End: Original strand, 51111806 - 51112002
Alignment:
| Q |
43 |
ctgataataagtgcaatgtttggagtgttcttattaagtgttgaataatgtttgaaattttgtattttctattatggataccatgaaaagcttgaataga |
142 |
Q |
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| T |
51111806 |
ctgataatgagtgcaatgtttggagtgttcttattaagtgttgaataatgtttgaaattttgtattttctattatggataccatgaaaagcttgaataga |
51111905 |
T |
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| Q |
143 |
aatgtagctgagagtgtgaaattatatttattggtactgtgtcaattcttaacgttgctttattgggtgcagttgta-ttttttccaataactactt |
238 |
Q |
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| T |
51111906 |
aatgtagctgagagtgtgaaattatatttattggtactgtgtcaattcttaacgttgctttattgggtgcagttgtatttttttccaataactactt |
51112002 |
T |
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