View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3686_low_22 (Length: 316)
Name: NF3686_low_22
Description: NF3686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3686_low_22 |
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Alignment Details
Target: chr2 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 8 - 299
Target Start/End: Complemental strand, 44817323 - 44817032
Alignment:
| Q |
8 |
cgaagaatatggcaccttaacctataaaatgacaataaatgaaaggcatataacatctactcttgttgaacaattattttacagcaatgaaaataatcac |
107 |
Q |
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| T |
44817323 |
cgaagaaaatggcaccttaacctataaaatgacaataaatgaaaggcatataacatctactcttgttgaacaattattttacagcaatgaaaataatcac |
44817224 |
T |
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| Q |
108 |
caacaaaaaatctcaggtatgatgtatcaactcaatgacaataatattcttttacaaagaatcagatcttattgggaatatagcaattgagtacataagg |
207 |
Q |
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| T |
44817223 |
caacaaaaaatctcaggtatgatgtatcaacccaatgacaataatattcttttacaaagaatcagatcttattgggaatatagcaattgagtacataagg |
44817124 |
T |
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| Q |
208 |
aaaaggacatggattaaaaaataaaatctatcgttatgactcccttatttagtttcaaaactgatactttacactttaaaagagtcatgctt |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44817123 |
aaaaggacatggattaaaaaataaaatctatcgttatgactcccttatttagtttcaaaactgatactttacactttaaaagagtcatgctt |
44817032 |
T |
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