View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3687_high_1 (Length: 669)

Name: NF3687_high_1
Description: NF3687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3687_high_1
NF3687_high_1
[»] chr3 (57 HSPs)
chr3 (19-658)||(53754054-53754694)
chr3 (442-644)||(48409485-48409687)
chr3 (538-658)||(29858854-29858975)
chr3 (540-658)||(51164950-51165069)
chr3 (538-658)||(41287259-41287379)
chr3 (540-658)||(1334771-1334889)
chr3 (538-656)||(21585402-21585520)
chr3 (540-658)||(54021448-54021566)
chr3 (490-658)||(53050975-53051143)
chr3 (540-658)||(38600796-38600914)
chr3 (500-628)||(32977810-32977938)
chr3 (499-627)||(39329771-39329899)
chr3 (500-610)||(46194244-46194354)
chr3 (443-628)||(50736003-50736183)
chr3 (443-628)||(50776672-50776852)
chr3 (538-622)||(1923087-1923171)
chr3 (513-614)||(47496141-47496242)
chr3 (540-627)||(9218144-9218231)
chr3 (541-627)||(11529132-11529218)
chr3 (538-607)||(27668368-27668437)
chr3 (499-627)||(21296524-21296652)
chr3 (540-627)||(32023122-32023209)
chr3 (500-628)||(30261521-30261650)
chr3 (597-658)||(36315723-36315784)
chr3 (538-650)||(3862171-3862282)
chr3 (499-627)||(42547127-42547255)
chr3 (538-656)||(44219027-44219143)
chr3 (540-606)||(54845558-54845624)
chr3 (538-603)||(45746363-45746428)
chr3 (582-638)||(39144686-39144742)
chr3 (540-627)||(33994656-33994743)
chr3 (538-601)||(45241008-45241071)
chr3 (538-625)||(52325174-52325261)
chr3 (575-650)||(54458307-54458382)
chr3 (540-606)||(53876478-53876544)
chr3 (541-658)||(8498254-8498371)
chr3 (540-625)||(32827327-32827412)
chr3 (538-627)||(34081076-34081165)
chr3 (540-627)||(5245411-5245498)
chr3 (569-608)||(49122174-49122213)
chr3 (540-627)||(54122245-54122332)
chr3 (538-658)||(8706145-8706263)
chr3 (538-658)||(9058032-9058150)
chr3 (540-606)||(15280604-15280670)
chr3 (541-603)||(17777039-17777101)
chr3 (541-603)||(19078340-19078402)
chr3 (576-618)||(35300672-35300714)
chr3 (540-606)||(43639558-43639624)
chr3 (538-604)||(50150411-50150477)
chr3 (435-468)||(9218039-9218072)
chr3 (575-628)||(53583580-53583633)
chr3 (575-627)||(14756135-14756187)
chr3 (543-607)||(29807126-29807190)
chr3 (575-655)||(31650945-31651024)
chr3 (540-600)||(36097703-36097763)
chr3 (575-627)||(44234124-44234176)
chr3 (436-476)||(47496072-47496112)
[»] chr1 (100 HSPs)
chr1 (129-405)||(8571696-8571972)
chr1 (500-658)||(52382377-52382536)
chr1 (501-658)||(36232780-36232937)
chr1 (538-658)||(27209958-27210078)
chr1 (452-658)||(5115816-5116023)
chr1 (500-650)||(14352525-14352675)
chr1 (556-656)||(37280990-37281090)
chr1 (490-628)||(12267652-12267790)
chr1 (499-658)||(11425860-11426019)
chr1 (499-658)||(16040035-16040194)
chr1 (436-615)||(50333830-50334009)
chr1 (541-650)||(705348-705457)
chr1 (435-616)||(2886065-2886246)
chr1 (501-658)||(31798378-31798535)
chr1 (559-656)||(37495847-37495944)
chr1 (497-658)||(47293590-47293750)
chr1 (508-658)||(37925237-37925387)
chr1 (538-658)||(4466145-4466265)
chr1 (500-658)||(26583687-26583845)
chr1 (538-658)||(28706614-28706735)
chr1 (538-658)||(27932824-27932944)
chr1 (538-658)||(29756133-29756253)
chr1 (500-655)||(29225402-29225556)
chr1 (445-658)||(37541104-37541321)
chr1 (543-644)||(21304811-21304912)
chr1 (442-643)||(29225654-29225854)
chr1 (497-658)||(40061765-40061926)
chr1 (540-658)||(2219439-2219557)
chr1 (500-598)||(20988533-20988631)
chr1 (556-658)||(26924111-26924213)
chr1 (501-650)||(17342788-17342937)
chr1 (501-658)||(24131391-24131548)
chr1 (538-658)||(46363401-46363522)
chr1 (500-597)||(5359319-5359415)
chr1 (542-658)||(33149274-33149390)
chr1 (551-658)||(40754403-40754511)
chr1 (538-650)||(46273157-46273269)
chr1 (582-658)||(50926788-50926864)
chr1 (540-658)||(51749174-51749292)
chr1 (543-616)||(50086011-50086084)
chr1 (538-618)||(10587612-10587692)
chr1 (538-650)||(45305850-45305961)
chr1 (550-658)||(51049517-51049624)
chr1 (499-606)||(43895805-43895912)
chr1 (499-606)||(48242633-48242740)
chr1 (538-608)||(44580513-44580583)
chr1 (500-597)||(16451590-16451687)
chr1 (500-597)||(16460743-16460840)
chr1 (500-644)||(2571323-2571465)
chr1 (538-654)||(13500724-13500840)
chr1 (538-638)||(18186217-18186317)
chr1 (546-617)||(167489-167560)
chr1 (541-628)||(3718870-3718957)
chr1 (540-627)||(7785296-7785383)
chr1 (540-627)||(25983650-25983737)
chr1 (500-658)||(27831804-27831963)
chr1 (583-642)||(31634300-31634359)
chr1 (540-627)||(50267460-50267547)
chr1 (538-605)||(52146699-52146766)
chr1 (538-627)||(25842596-25842685)
chr1 (538-644)||(30903233-30903338)
chr1 (538-607)||(19349036-19349105)
chr1 (540-657)||(32587764-32587881)
chr1 (540-657)||(46496017-46496134)
chr1 (538-594)||(4659428-4659484)
chr1 (580-656)||(16956582-16956658)
chr1 (542-606)||(21304385-21304449)
chr1 (576-624)||(27142948-27142996)
chr1 (539-607)||(34877132-34877200)
chr1 (540-624)||(45889273-45889357)
chr1 (540-627)||(5442339-5442426)
chr1 (538-608)||(7075441-7075514)
chr1 (540-627)||(8327716-8327803)
chr1 (595-658)||(36326196-36326259)
chr1 (538-635)||(26040638-26040738)
chr1 (538-616)||(48391744-48391822)
chr1 (540-606)||(49494206-49494272)
chr1 (540-658)||(52432311-52432429)
chr1 (538-607)||(2246319-2246388)
chr1 (542-627)||(12691906-12691990)
chr1 (602-643)||(20986588-20986629)
chr1 (541-606)||(46536340-46536405)
chr1 (556-624)||(5503435-5503503)
chr1 (570-658)||(25819338-25819425)
chr1 (540-656)||(42926133-42926249)
chr1 (548-607)||(141743-141802)
chr1 (582-649)||(9590553-9590620)
chr1 (540-627)||(28277060-28277147)
chr1 (540-627)||(28839338-28839425)
chr1 (538-625)||(40988272-40988359)
chr1 (575-658)||(52830405-52830488)
chr1 (541-607)||(34813917-34813983)
chr1 (540-606)||(38664400-38664466)
chr1 (538-584)||(40019756-40019802)
chr1 (540-606)||(46880415-46880480)
chr1 (606-644)||(47792224-47792262)
chr1 (612-658)||(50086107-50086153)
chr1 (579-627)||(25869721-25869769)
chr1 (538-658)||(39420581-39420703)
chr1 (606-650)||(26040734-26040778)
[»] chr8 (75 HSPs)
chr8 (443-650)||(40077748-40077955)
chr8 (500-656)||(29638260-29638416)
chr8 (435-658)||(14689854-14690077)
chr8 (500-658)||(28791267-28791425)
chr8 (500-642)||(32678994-32679136)
chr8 (541-658)||(11637140-11637256)
chr8 (490-644)||(14117411-14117565)
chr8 (549-658)||(39998171-39998280)
chr8 (499-644)||(41726479-41726624)
chr8 (499-658)||(886438-886597)
chr8 (539-650)||(41759628-41759739)
chr8 (500-658)||(2195427-2195584)
chr8 (538-639)||(8418311-8418412)
chr8 (538-655)||(1494241-1494356)
chr8 (538-624)||(2875110-2875196)
chr8 (500-649)||(25174584-25174733)
chr8 (500-658)||(45420929-45421088)
chr8 (538-616)||(2797037-2797115)
chr8 (538-616)||(14748738-14748816)
chr8 (540-624)||(2119715-2119799)
chr8 (542-626)||(18725910-18725994)
chr8 (540-658)||(5392048-5392166)
chr8 (538-644)||(8618125-8618231)
chr8 (569-658)||(5878217-5878305)
chr8 (549-626)||(18733393-18733470)
chr8 (538-634)||(43844897-43844992)
chr8 (539-650)||(15559128-15559239)
chr8 (540-627)||(44790443-44790530)
chr8 (538-628)||(7258387-7258477)
chr8 (540-650)||(32241422-32241532)
chr8 (540-658)||(38201382-38201499)
chr8 (500-650)||(45197570-45197720)
chr8 (582-635)||(25266814-25266867)
chr8 (541-606)||(31410650-31410715)
chr8 (452-528)||(25267177-25267253)
chr8 (499-606)||(4274341-4274448)
chr8 (569-624)||(23764994-23765049)
chr8 (540-627)||(32967298-32967385)
chr8 (544-627)||(42558602-42558685)
chr8 (540-627)||(44615386-44615473)
chr8 (556-650)||(325114-325208)
chr8 (538-644)||(10728927-10729032)
chr8 (458-600)||(32231768-32231910)
chr8 (548-658)||(33743783-33743893)
chr8 (538-624)||(42412407-42412493)
chr8 (538-607)||(1230403-1230472)
chr8 (538-607)||(33826228-33826297)
chr8 (538-627)||(44225942-44226031)
chr8 (540-627)||(5962494-5962581)
chr8 (500-615)||(37459309-37459424)
chr8 (574-624)||(9734191-9734241)
chr8 (540-602)||(12653686-12653748)
chr8 (538-610)||(17005945-17006014)
chr8 (538-610)||(17571234-17571303)
chr8 (538-628)||(27868345-27868435)
chr8 (540-606)||(28802766-28802832)
chr8 (540-602)||(33925130-33925192)
chr8 (540-606)||(45425484-45425550)
chr8 (549-658)||(5423154-5423263)
chr8 (559-624)||(8394279-8394344)
chr8 (569-650)||(27571580-27571661)
chr8 (499-608)||(34287119-34287228)
chr8 (538-616)||(44975779-44975859)
chr8 (553-625)||(3384546-3384618)
chr8 (590-658)||(26570142-26570210)
chr8 (539-624)||(26677067-26677156)
chr8 (540-656)||(31132729-31132845)
chr8 (577-628)||(32472130-32472181)
chr8 (499-658)||(33190899-33191058)
chr8 (540-627)||(37219785-37219872)
chr8 (540-606)||(39171542-39171608)
chr8 (538-607)||(29567202-29567271)
chr8 (548-608)||(17790110-17790170)
chr8 (540-604)||(29615797-29615861)
chr8 (538-606)||(39416308-39416375)
[»] chr6 (30 HSPs)
chr6 (436-658)||(33921459-33921681)
chr6 (436-658)||(3166098-3166319)
chr6 (538-644)||(33017948-33018054)
chr6 (508-650)||(3874048-3874189)
chr6 (463-627)||(8232332-8232495)
chr6 (538-658)||(9354430-9354553)
chr6 (538-657)||(15371855-15371973)
chr6 (538-624)||(4552906-4552992)
chr6 (540-627)||(31265778-31265865)
chr6 (538-624)||(15321249-15321335)
chr6 (501-650)||(34803703-34803854)
chr6 (568-658)||(34915803-34915893)
chr6 (540-657)||(7301071-7301188)
chr6 (597-650)||(20027638-20027691)
chr6 (538-614)||(15351417-15351493)
chr6 (538-650)||(20383843-20383953)
chr6 (501-616)||(2310320-2310435)
chr6 (540-627)||(3604621-3604708)
chr6 (540-627)||(9755168-9755255)
chr6 (500-600)||(34441851-34441950)
chr6 (541-650)||(14312646-14312755)
chr6 (569-658)||(15355603-15355691)
chr6 (538-627)||(28538993-28539082)
chr6 (538-614)||(15325144-15325220)
chr6 (544-607)||(7739559-7739622)
chr6 (540-602)||(30063995-30064057)
chr6 (541-650)||(14306239-14306348)
chr6 (540-627)||(4238421-4238507)
chr6 (538-600)||(8569787-8569849)
chr6 (591-644)||(34442134-34442187)
[»] chr2 (76 HSPs)
chr2 (453-650)||(18460400-18460597)
chr2 (490-658)||(1908484-1908652)
chr2 (500-644)||(7931500-7931644)
chr2 (500-649)||(9472381-9472530)
chr2 (500-644)||(24356070-24356214)
chr2 (499-658)||(7213433-7213592)
chr2 (442-650)||(28843958-28844171)
chr2 (540-658)||(9724879-9724995)
chr2 (501-656)||(37529063-37529218)
chr2 (436-658)||(6972529-6972756)
chr2 (538-624)||(2048289-2048375)
chr2 (538-658)||(4283009-4283129)
chr2 (490-650)||(43182223-43182381)
chr2 (434-658)||(31348404-31348628)
chr2 (437-658)||(13221965-13222185)
chr2 (538-619)||(39166725-39166806)
chr2 (538-643)||(928543-928646)
chr2 (538-628)||(14384298-14384388)
chr2 (538-628)||(19515878-19515968)
chr2 (538-650)||(24451781-24451891)
chr2 (538-658)||(8550632-8550752)
chr2 (538-658)||(31592547-31592666)
chr2 (538-658)||(3199895-3200012)
chr2 (538-616)||(43427118-43427196)
chr2 (565-650)||(314451-314536)
chr2 (540-597)||(33880157-33880214)
chr2 (538-627)||(39095628-39095717)
chr2 (538-658)||(44424253-44424373)
chr2 (538-650)||(4794570-4794682)
chr2 (538-658)||(18181203-18181323)
chr2 (586-658)||(38280186-38280258)
chr2 (500-607)||(10069626-10069733)
chr2 (508-658)||(25604328-25604476)
chr2 (540-627)||(28108396-28108483)
chr2 (442-594)||(38282477-38282631)
chr2 (499-650)||(41436037-41436188)
chr2 (550-616)||(2427369-2427435)
chr2 (538-600)||(3487391-3487453)
chr2 (538-656)||(6213842-6213960)
chr2 (538-624)||(6723884-6723969)
chr2 (593-650)||(14890369-14890426)
chr2 (538-658)||(734002-734121)
chr2 (538-606)||(11726764-11726832)
chr2 (540-644)||(23684958-23685062)
chr2 (538-605)||(6685706-6685773)
chr2 (540-627)||(28301433-28301520)
chr2 (575-658)||(36748182-36748265)
chr2 (540-627)||(37247905-37247992)
chr2 (540-627)||(44534504-44534591)
chr2 (540-625)||(13375212-13375298)
chr2 (538-624)||(26273756-26273842)
chr2 (569-658)||(40710605-40710693)
chr2 (538-607)||(44024715-44024784)
chr2 (547-607)||(29937955-29938015)
chr2 (539-650)||(38872920-38873029)
chr2 (575-650)||(39807242-39807322)
chr2 (540-604)||(43077770-43077834)
chr2 (543-658)||(3100402-3100517)
chr2 (540-627)||(10818620-10818707)
chr2 (499-602)||(15859388-15859491)
chr2 (540-627)||(24775829-24775916)
chr2 (540-627)||(28526963-28527050)
chr2 (499-606)||(31546060-31546167)
chr2 (540-606)||(5212000-5212066)
chr2 (540-658)||(8031740-8031858)
chr2 (538-604)||(16864978-16865044)
chr2 (540-606)||(30757610-30757676)
chr2 (538-588)||(44736716-44736766)
chr2 (538-607)||(2756671-2756740)
chr2 (538-607)||(7420918-7420987)
chr2 (577-658)||(33755293-33755374)
chr2 (542-606)||(435120-435184)
chr2 (538-594)||(6075495-6075551)
chr2 (586-650)||(12949963-12950026)
chr2 (538-605)||(33602269-33602339)
chr2 (575-607)||(43056409-43056441)
[»] chr7 (63 HSPs)
chr7 (490-658)||(2849204-2849372)
chr7 (436-644)||(18731337-18731542)
chr7 (500-654)||(27337867-27338020)
chr7 (538-658)||(32775980-32776100)
chr7 (435-611)||(5068335-5068511)
chr7 (500-658)||(30659470-30659628)
chr7 (500-658)||(37264272-37264430)
chr7 (443-650)||(36070003-36070214)
chr7 (538-650)||(10355733-10355845)
chr7 (538-658)||(24288420-24288540)
chr7 (538-658)||(34064212-34064331)
chr7 (500-644)||(39343675-39343819)
chr7 (509-644)||(43007862-43007997)
chr7 (538-658)||(38589731-38589851)
chr7 (433-627)||(37496418-37496612)
chr7 (443-656)||(3667870-3668082)
chr7 (553-658)||(45218148-45218253)
chr7 (578-658)||(23111079-23111159)
chr7 (497-607)||(28333127-28333237)
chr7 (501-658)||(30462620-30462777)
chr7 (538-658)||(32972008-32972128)
chr7 (538-658)||(6591527-6591651)
chr7 (540-658)||(37490608-37490726)
chr7 (538-616)||(9602858-9602936)
chr7 (538-616)||(9830429-9830507)
chr7 (538-624)||(14648943-14649029)
chr7 (501-650)||(29997027-29997176)
chr7 (549-658)||(21412025-21412134)
chr7 (538-628)||(25778741-25778831)
chr7 (540-658)||(38181864-38181982)
chr7 (497-658)||(8149915-8150075)
chr7 (569-633)||(6838090-6838154)
chr7 (499-627)||(31581464-31581592)
chr7 (538-658)||(47238214-47238334)
chr7 (540-627)||(40590846-40590933)
chr7 (540-606)||(29257546-29257612)
chr7 (540-624)||(23186167-23186251)
chr7 (544-627)||(1643359-1643442)
chr7 (540-627)||(30463015-30463102)
chr7 (541-627)||(7425899-7425985)
chr7 (501-627)||(17265987-17266113)
chr7 (541-607)||(25940790-25940856)
chr7 (540-606)||(34963853-34963919)
chr7 (540-658)||(44604468-44604585)
chr7 (547-607)||(11726787-11726847)
chr7 (575-627)||(21387501-21387553)
chr7 (538-658)||(21446433-21446553)
chr7 (499-603)||(40023772-40023875)
chr7 (540-658)||(2842042-2842160)
chr7 (540-606)||(23703915-23703981)
chr7 (538-616)||(30459059-30459137)
chr7 (540-606)||(46288473-46288539)
chr7 (569-658)||(9658866-9658954)
chr7 (548-609)||(19505809-19505870)
chr7 (538-607)||(39171135-39171204)
chr7 (538-607)||(39498671-39498740)
chr7 (538-594)||(1101997-1102053)
chr7 (540-627)||(11616560-11616648)
chr7 (540-604)||(29434624-29434688)
chr7 (543-607)||(34001900-34001964)
chr7 (540-604)||(36117660-36117724)
chr7 (550-606)||(46095462-46095518)
chr7 (575-627)||(49100523-49100575)
[»] scaffold0685 (1 HSPs)
scaffold0685 (500-658)||(6390-6549)
[»] scaffold0003 (1 HSPs)
scaffold0003 (538-658)||(352451-352571)
[»] chr4 (77 HSPs)
chr4 (540-650)||(35998115-35998225)
chr4 (540-643)||(39052906-39053009)
chr4 (164-390)||(28940695-28940921)
chr4 (490-644)||(44633105-44633259)
chr4 (538-641)||(55360355-55360458)
chr4 (436-650)||(42051654-42051870)
chr4 (490-654)||(28279786-28279950)
chr4 (538-644)||(32949853-32949959)
chr4 (500-611)||(29550764-29550875)
chr4 (499-658)||(38319869-38320028)
chr4 (538-644)||(10099729-10099835)
chr4 (540-657)||(34790942-34791060)
chr4 (545-658)||(48400621-48400734)
chr4 (538-633)||(22872403-22872498)
chr4 (538-643)||(3505719-3505823)
chr4 (569-658)||(35029063-35029152)
chr4 (511-658)||(25149421-25149569)
chr4 (538-658)||(28330791-28330911)
chr4 (442-616)||(36047132-36047308)
chr4 (538-654)||(37786958-37787074)
chr4 (538-658)||(38160142-38160262)
chr4 (509-616)||(42132781-42132888)
chr4 (538-625)||(47277705-47277792)
chr4 (540-625)||(48740519-48740604)
chr4 (538-658)||(51076401-51076524)
chr4 (538-658)||(20964278-20964398)
chr4 (538-650)||(22020509-22020620)
chr4 (500-616)||(37315954-37316070)
chr4 (539-650)||(27977145-27977256)
chr4 (540-658)||(42544208-42544326)
chr4 (501-658)||(4354408-4354565)
chr4 (540-627)||(3686010-3686097)
chr4 (575-658)||(49401690-49401773)
chr4 (538-624)||(49218807-49218892)
chr4 (569-650)||(53848674-53848755)
chr4 (442-615)||(54217243-54217416)
chr4 (436-656)||(4360400-4360619)
chr4 (540-616)||(8759778-8759854)
chr4 (569-645)||(30680441-30680517)
chr4 (538-658)||(49448838-49448958)
chr4 (540-627)||(18849780-18849867)
chr4 (540-627)||(49306586-49306673)
chr4 (538-624)||(11583895-11583981)
chr4 (540-606)||(29644354-29644420)
chr4 (569-655)||(33093453-33093538)
chr4 (540-606)||(37309697-37309763)
chr4 (540-606)||(41710186-41710252)
chr4 (575-644)||(55293509-55293579)
chr4 (538-607)||(5499470-5499539)
chr4 (538-607)||(25250634-25250703)
chr4 (207-295)||(17346341-17346429)
chr4 (501-625)||(41436441-41436565)
chr4 (538-654)||(46958719-46958834)
chr4 (538-606)||(47846896-47846964)
chr4 (538-606)||(51572270-51572338)
chr4 (575-650)||(25902460-25902535)
chr4 (540-627)||(39979779-39979866)
chr4 (540-627)||(41203736-41203823)
chr4 (577-643)||(13719811-13719877)
chr4 (540-606)||(26799258-26799324)
chr4 (540-606)||(38976990-38977056)
chr4 (538-607)||(9052091-9052160)
chr4 (538-643)||(29990478-29990582)
chr4 (540-604)||(1825292-1825356)
chr4 (538-606)||(17237040-17237108)
chr4 (590-650)||(17317668-17317728)
chr4 (538-658)||(40020938-40021058)
chr4 (540-627)||(28974305-28974392)
chr4 (224-299)||(42015289-42015364)
chr4 (540-606)||(1796284-1796350)
chr4 (583-649)||(5291706-5291772)
chr4 (540-606)||(39258314-39258380)
chr4 (540-606)||(54729526-54729591)
chr4 (569-658)||(13529890-13529978)
chr4 (550-607)||(25125117-25125174)
chr4 (538-658)||(29136779-29136899)
chr4 (540-588)||(29815157-29815205)
[»] chr5 (71 HSPs)
chr5 (538-658)||(5357808-5357928)
chr5 (442-658)||(39060945-39061161)
chr5 (434-650)||(36006891-36007104)
chr5 (501-658)||(10044629-10044785)
chr5 (538-658)||(25111139-25111259)
chr5 (538-658)||(25170230-25170350)
chr5 (538-658)||(15898188-15898308)
chr5 (539-658)||(13087733-13087851)
chr5 (499-658)||(31090262-31090421)
chr5 (538-658)||(25108570-25108690)
chr5 (538-658)||(25167662-25167782)
chr5 (573-656)||(5147489-5147572)
chr5 (539-658)||(13016355-13016473)
chr5 (538-608)||(19889574-19889644)
chr5 (501-623)||(42818864-42818985)
chr5 (542-624)||(38978905-38978987)
chr5 (575-628)||(4044498-4044551)
chr5 (538-607)||(31956727-31956796)
chr5 (579-644)||(35968758-35968823)
chr5 (575-655)||(16926085-16926165)
chr5 (433-608)||(43525372-43525545)
chr5 (499-644)||(6629398-6629543)
chr5 (540-650)||(33988199-33988309)
chr5 (540-658)||(35646080-35646198)
chr5 (538-607)||(16883973-16884042)
chr5 (547-627)||(791982-792062)
chr5 (540-616)||(20189891-20189967)
chr5 (538-606)||(39183670-39183738)
chr5 (540-627)||(8369718-8369805)
chr5 (579-658)||(39060413-39060492)
chr5 (540-658)||(6610836-6610954)
chr5 (538-658)||(17741160-17741284)
chr5 (538-604)||(34534919-34534985)
chr5 (538-628)||(35988631-35988721)
chr5 (538-650)||(15254762-15254874)
chr5 (538-606)||(17699330-17699398)
chr5 (539-607)||(32659814-32659882)
chr5 (538-650)||(36469093-36469205)
chr5 (500-607)||(72147-72254)
chr5 (538-624)||(7871311-7871396)
chr5 (540-658)||(11099468-11099586)
chr5 (540-606)||(17242997-17243063)
chr5 (538-607)||(5072947-5073016)
chr5 (550-607)||(7311222-7311279)
chr5 (575-644)||(16954899-16954967)
chr5 (538-607)||(39212593-39212662)
chr5 (540-624)||(858334-858418)
chr5 (548-608)||(15564929-15564989)
chr5 (584-644)||(30437744-30437804)
chr5 (540-627)||(3725185-3725272)
chr5 (540-627)||(7613706-7613793)
chr5 (497-607)||(14184091-14184201)
chr5 (497-616)||(39035888-39036007)
chr5 (549-607)||(25344780-25344838)
chr5 (540-606)||(35334569-35334635)
chr5 (540-658)||(42575629-42575747)
chr5 (538-607)||(6173022-6173091)
chr5 (499-627)||(8692840-8692968)
chr5 (538-606)||(16283630-16283698)
chr5 (540-627)||(41184116-41184203)
chr5 (584-658)||(4194975-4195049)
chr5 (541-627)||(6735379-6735465)
chr5 (540-606)||(13135752-13135818)
chr5 (497-587)||(13422414-13422503)
chr5 (552-601)||(146748-146797)
chr5 (546-627)||(6239118-6239199)
chr5 (559-644)||(31196337-31196422)
chr5 (542-607)||(42158688-42158753)
chr5 (583-658)||(20364580-20364656)
chr5 (575-607)||(22398313-22398345)
chr5 (575-627)||(25814398-25814450)
[»] scaffold0262 (1 HSPs)
scaffold0262 (539-649)||(12435-12545)
[»] scaffold0086 (1 HSPs)
scaffold0086 (540-658)||(5817-5935)
[»] scaffold0221 (2 HSPs)
scaffold0221 (538-658)||(10781-10901)
scaffold0221 (540-625)||(8886-8971)
[»] scaffold0155 (1 HSPs)
scaffold0155 (501-624)||(7978-8101)
[»] scaffold0020 (1 HSPs)
scaffold0020 (538-607)||(171223-171292)
[»] scaffold0009 (1 HSPs)
scaffold0009 (557-658)||(220009-220110)
[»] scaffold0006 (1 HSPs)
scaffold0006 (540-627)||(229822-229909)
[»] scaffold0001 (1 HSPs)
scaffold0001 (540-627)||(394777-394864)
[»] scaffold0576 (1 HSPs)
scaffold0576 (569-658)||(593-681)
[»] scaffold0007 (1 HSPs)
scaffold0007 (540-620)||(230255-230335)
[»] scaffold0034 (1 HSPs)
scaffold0034 (540-602)||(98824-98886)
[»] scaffold0058 (1 HSPs)
scaffold0058 (540-604)||(14455-14519)
[»] scaffold0028 (1 HSPs)
scaffold0028 (540-627)||(26612-26699)


Alignment Details
Target: chr3 (Bit Score: 561; Significance: 0; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 561; E-Value: 0
Query Start/End: Original strand, 19 - 658
Target Start/End: Complemental strand, 53754694 - 53754054
Alignment:
Q  19 cacatttagtggtagatttttaaatactattacatgaattgagtggtagactgtagatatggcaatgtgacaatccatataaggaatgtggatttaattg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  53754694 cacatttagtggtagatttttaaatactattacatgaattgagtggtagactgtagatatggcaatgtgacaatccatttaaggaatgtggatttaattg 53754595  T
Q  119 aatgaaattgcaggaatgggatccagcagagaaggaactcattcgaagatggtgtttcgggaacaacatgccccatcccaccagggaggaacttcacata 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53754594 aatgaaattgcaggaatgggatccagcagagaaggaactcattcgaagatggtgtttcgggaacaacatgccccatcccaccagggaggaacttcacata 53754495  T
Q  219 tattcttcaagtgaaggatcaaattggaagcttttactactttccatctctagcatttcaaaaagcagctggtggttttggaggcattaggatactcagt 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53754494 tattcttcaagtgaaggatcaaattggaagcttttactactttccatctctagcatttcaaaaagcagctggtggttttggaggcattaggatactcagt 53754395  T
Q  319 agacctagaattccagtccctttccctgaaccagctggagattacactgtccttattggtgattggtacaagtccaaccatacggtatgatacaattaat 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53754394 agacctagaattccagtccctttccctgaaccagctggagattacactgtccttattggtgattggtacaagtccaaccatacggtatgatacaattaat 53754295  T
Q  419 taacttgccttcttttatactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaataca 518  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||||    
T  53754294 taacttgccttcttttatactcgctccgtcccataataactgagtcatttataaaaaattattgtcacagtaatcttgactcatttcagttttcaataca 53754195  T
Q  519 acattaatta-cnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgt 617  Q
    ||||||||||          |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  53754194 acattaattatttttttttcaattataactctaattaatactacttttactattcttaattcaatatattctactttacatttatgataaagaagaatgc 53754095  T
Q  618 accaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  53754094 accaatacttaccaaagacactcaaaatcatttttctctct 53754054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 442 - 644
Target Start/End: Original strand, 48409485 - 48409687
Alignment:
Q  442 ctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaatt 541  Q
    ||||||||||||||||||||| ||||| ||||||| || ||||   | |||||| |  ||||||||||||||||||||||||||||||        ||||    
T  48409485 ctccgtcccgtaataactgagccatttgtaaaaaaatattgtcctaggaatcttgacccatttcagttttcaatacaacattaattacttttttccaatt 48409584  T
Q  542 ataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactca 641  Q
    |||||||||||||||| |||||| || ||||  ||||||| |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  48409585 ataactctaattaatactactttcaccactcccaattcaacatattctactttacatttatgataaagaagaatccaccaatacttgacaaagacactca 48409684  T
Q  642 aaa 644  Q
    |||    
T  48409685 aaa 48409687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 29858975 - 29858854
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||| ||||||||||| |||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  29858975 aattataattctaattaatactactttcaccactcataattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgacaaaaaca 29858876  T
Q  638 ctcaaaatcatt-tctctctct 658  Q
    ||||||| |||| |||||||||    
T  29858875 ctcaaaaccattctctctctct 29858854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 540 - 658
Target Start/End: Original strand, 51164950 - 51165069
Alignment:
Q  540 ttataactctaattaa-tattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacac 638  Q
    |||||||||||||||| || |||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  51164950 ttataactctaattaagtactactttcactactccaaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaagacac 51165049  T
Q  639 tcaaaatcatttctctctct 658  Q
    ||||||| |||| |||||||    
T  51165050 tcaaaattatttttctctct 51165069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 41287259 - 41287379
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||||||||||||||||| ||| || ||||| ||||||||||||||||||||||||||||||||||||| |||| | ||||||||| |||||| |    
T  41287259 aattataactctaattaatattaatttcacaactctcaattcaatatattctactttacatttatgataaagaataatgcatcaatacttgacaaagata 41287358  T
Q  638 ctcaaaatcatttctctctct 658  Q
     |||||| ||||| |||||||    
T  41287359 gtcaaaaccatttttctctct 41287379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 540 - 658
Target Start/End: Complemental strand, 1334889 - 1334771
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| |||||| || ||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| || |    
T  1334889 ttataactctaattaatactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaggcatt 1334790  T
Q  640 caaaatcatttctctctct 658  Q
    |||||| |||| |||||||    
T  1334789 caaaattatttttctctct 1334771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 538 - 656
Target Start/End: Complemental strand, 21585520 - 21585402
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||||||||||||||||||||| || |||   ||| |||||||||||| ||||||||||||||||||||||||| ||||||| ||  ||||||||    
T  21585520 aattataactctaattaatattactttcaccacttccaatacaatatattctattttacatttatgataaagaagaatgaaccaataattaacaaagaca 21585421  T
Q  638 ctcaaaatcatttctctct 656  Q
    ||||||||||||| |||||    
T  21585420 ctcaaaatcatttttctct 21585402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 540 - 658
Target Start/End: Complemental strand, 54021566 - 54021448
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||| ||||||||||| |||||| || ||||  |||||||||||||||||||||||||||| ||||||||||||| | ||||| |||  |||||||||    
T  54021566 ttataattctaattaatactactttcaccactccgaattcaatatattctactttacatttataataaagaagaatgcaacaatatttgataaagacact 54021467  T
Q  640 caaaatcatttctctctct 658  Q
    ||||||||||| |||||||    
T  54021466 caaaatcatttttctctct 54021448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 490 - 658
Target Start/End: Original strand, 53050975 - 53051143
Alignment:
Q  490 aatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattct 589  Q
    |||||| || ||||||| |||||||| ||| |||||||||        |||||||||||||||||||| |||||| || ||||  ||||||||||||| |    
T  53050975 aatcttgatccatttcacttttcaatgcaatattaattacttttctccaattataactctaattaatactactttcacaactcccaattcaatatattat 53051074  T
Q  590 actttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||||||||||| ||||||| || ||||||||  |||| |||||||||  |||| |||||||    
T  53051075 actttacatttatgataaacaagaatgcacaaatacttgaaaaaggcactcaaaactatttttctctct 53051143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 540 - 658
Target Start/End: Complemental strand, 38600914 - 38600796
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| |||||| |  ||||  | ||||||||||| ||||||||||||||| |||||||||||| |||||||||||  ||||  |||    
T  38600914 ttataactctaattaatactactttcatcactcccagttcaatatattatactttacatttatggtaaagaagaatgcaccaatacttgataaagggact 38600815  T
Q  640 caaaatcatttctctctct 658  Q
    ||||||||||| |||||||    
T  38600814 caaaatcatttttctctct 38600796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 500 - 628
Target Start/End: Complemental strand, 32977938 - 32977810
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||||||| ||||||||||||         |||||||||||||||||||| |||||| || ||||| ||||||||||||||||  |||||||    
T  32977938 catttcacttttcaatgcaacattaattatttttctccaattataactctaattaatactactttcacaactctcaattcaatatattctaaattacatt 32977839  T
Q  600 tatgataaagaagaatgtaccaatacttg 628  Q
    |||||||||||| |||| | |||||||||    
T  32977838 tatgataaagaaaaatgcatcaatacttg 32977810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 499 - 627
Target Start/End: Complemental strand, 39329899 - 39329771
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||||| |||||||        |||||||| ||||||||||| |||||| |  ||||| |||||||||||||||||||| |||    
T  39329899 tcatttcacttttcaatacaacaataattacttttttccaattataattctaattaatactactttcatcactctcaattcaatatattctactttgcat 39329800  T
Q  599 ttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||  ||||||| ||||||||||    
T  39329799 ttatgataagaaagaatgcaccaatactt 39329771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 500 - 610
Target Start/End: Complemental strand, 46194354 - 46194244
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||||||||||| |||||||||        ||||||||| |||||||||| |||||| || ||||| |||||||||||||||||||| ||||    
T  46194354 catttcacttttcaatacaatattaattacttttttccaattataacactaattaatactactttcaccactctcaattcaatatattctactttgcatt 46194255  T
Q  600 tatgataaaga 610  Q
    |||||||||||    
T  46194254 tatgataaaga 46194244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 443 - 628
Target Start/End: Original strand, 50736003 - 50736183
Alignment:
Q  443 tccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaatta 542  Q
    ||||||||||||||| ||||| |||| ||||||| || | || |   |||||| | |||||||||||||||||| ||||||||||||        || ||    
T  50736003 tccgtcccgtaataattgagttatttgtaaaaaaatattatcgcataaatcttgactcatttcagttttcaatagaacattaattacttttttccaacta 50736102  T
Q  543 taactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttg 628  Q
    ||||||||||||||| |||||| ||||||   ||||||||||||||||||| | ||     ||||||||||||| |||||||||||    
T  50736103 taactctaattaatactactttcactacttccaattcaatatattctacttgatat-----ataaagaagaatgcaccaatacttg 50736183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 443 - 628
Target Start/End: Complemental strand, 50776852 - 50776672
Alignment:
Q  443 tccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaatta 542  Q
    ||||||||||||||| ||||| |||| ||||||| || | || |   |||||| | |||||||||||||||||| ||||||||||||        || ||    
T  50776852 tccgtcccgtaataattgagttatttgtaaaaaaatattatcgcataaatcttgactcatttcagttttcaatagaacattaattacttttttccaacta 50776753  T
Q  543 taactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttg 628  Q
    ||||||||||||||| |||||| ||||||   ||||||||||||||||||| | ||     ||||||||||||| |||||||||||    
T  50776752 taactctaattaatactactttcactacttccaattcaatatattctacttgatat-----ataaagaagaatgcaccaatacttg 50776672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 538 - 622
Target Start/End: Original strand, 1923087 - 1923171
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaa 622  Q
    ||||||||| |||||||||| |||||| || ||||  |||||||||||||||||||| ||||||||||||||||||||| |||||    
T  1923087 aattataacactaattaatactactttcaccactcccaattcaatatattctactttgcatttatgataaagaagaatgcaccaa 1923171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 513 - 614
Target Start/End: Original strand, 47496141 - 47496242
Alignment:
Q  513 aatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaag 612  Q
    |||||||||||||||||        |||||||||||||||||||| |||||| |  |||||||||||||||||||  ||||||||||||||||||| |||    
T  47496141 aatacaacattaattacttttttcaaattataactctaattaatactactttcatcactcttaattcaatatattagactttacatttatgataaaaaag 47496240  T
Q  613 aa 614  Q
    ||    
T  47496241 aa 47496242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 9218144 - 9218231
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| |||||| |  ||||| |||||| ||||||||||||| ||||||||||||  ||||||| ||||||||||    
T  9218144 ttataactctaattaatactactttcatcactctcaattcattatattctactttgcatttatgataagaaagaatgcaccaatactt 9218231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 541 - 627
Target Start/End: Complemental strand, 11529218 - 11529132
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||||||||  |||| ||||| ||||||||| ||||| |||||||||||  | |||||||| ||||||||    
T  11529218 tataactctaattaatattacttttatcactcataatttaatatattccactttgcatttatgatattggagaatgtatcaatactt 11529132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 538 - 607
Target Start/End: Complemental strand, 27668437 - 27668368
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||  ||||| ||||||||||||    
T  27668437 aattataactctaattaatactacttttatcactcttaattcaatatatttcactttgcatttatgataa 27668368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 499 - 627
Target Start/End: Complemental strand, 21296652 - 21296524
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||          |||||||||||||||||| |||||| || |||   |||||||||||||||||||| |||    
T  21296652 tcatttcacttttcaatacaatattaattacttttttccttttataactctaattaatactactttcacaacttccaattcaatatattctactttgcat 21296553  T
Q  599 ttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||  ||| |||| ||||||||||    
T  21296552 ttatgatagtgaaaaatgcaccaatactt 21296524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 32023209 - 32023122
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||||||| |  ||||| |||||||||||||| ||||| ||||||| |||  | |||||| ||||||||||    
T  32023209 ttataactctaattaatattactttcatcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaatactt 32023122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 500 - 628
Target Start/End: Complemental strand, 30261650 - 30261521
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactact-cttaattcaatatattctactttacat 598  Q
    ||||||| |||||||||||| | |||||||        |||||||||||||||||||| |||||| |  ||| |  |||||||||||||| |||||||||    
T  30261650 catttcacttttcaatacaataataattactttttcctaattataactctaattaatactactttcatcactcccaaattcaatatattccactttacat 30261551  T
Q  599 ttatgataaagaagaatgtaccaatacttg 628  Q
    |||||||||  | ||||| |||||||||||    
T  30261550 ttatgataagaaggaatgcaccaatacttg 30261521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 658
Target Start/End: Complemental strand, 36315784 - 36315723
Alignment:
Q  597 atttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||||||||||||||||||||||  ||||||||||| ||||| ||| |||||||    
T  36315784 atttatgataaagaagaatgtaccaatacttaacaaagacactcgaaatcgtttttctctct 36315723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 650
Target Start/End: Complemental strand, 3862282 - 3862171
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||||||||||||||||||||| |  ||||| |||||| |||||| || ||| |||||||||||| |  ||||| | |||| |||| | ||||||    
T  3862282 aattataactctaattaatattactttcatcactctcaattcagtatattttaatttgcatttatgataatgtggaatgcatcaatccttgac-aagaca 3862184  T
Q  638 ctcaaaatcattt 650  Q
    |||||||| ||||    
T  3862183 ctcaaaataattt 3862171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 627
Target Start/End: Complemental strand, 42547255 - 42547127
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||||| ||||||         ||||||| |||||||||||| |||||| |  ||||  |||||||||||||||  ||| |||    
T  42547255 tcatttcacttttcaatacaacaataattattttattcaaattatagctctaattaatactactttcatcactcccaattcaatatattctcttttgcat 42547156  T
Q  599 ttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||  ||||||| ||||||||||    
T  42547155 ttatgataagaaagaatgcaccaatactt 42547127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 538 - 656
Target Start/End: Complemental strand, 44219143 - 44219027
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||| || ||| | ||||   ||||||||||||||||||||  ||||||||||| |  ||||| ||||| |||| |  ||||||    
T  44219143 aattataactctaattaatactattttcattacttccaattcaatatattctactttgtatttatgataatggggaatgcaccaacacttac--aagaca 44219046  T
Q  638 ctcaaaatcatttctctct 656  Q
    ||||||| ||||| |||||    
T  44219045 ctcaaaaccatttttctct 44219027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 54845624 - 54845558
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||| |||||| | ||||  ||||||||||||||| ||||| |||||||||||    
T  54845624 ttataactctaattaatactactttcattacttctaattcaatatattccactttgcatttatgata 54845558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 603
Target Start/End: Original strand, 45746363 - 45746428
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatg 603  Q
    |||||||||||||||||||| |||||| |  |||||||| || |||||||||||||| ||||||||    
T  45746363 aattataactctaattaatactactttcatcactcttaactccatatattctactttgcatttatg 45746428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 582 - 638
Target Start/End: Original strand, 39144686 - 39144742
Alignment:
Q  582 tatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacac 638  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||  |||||||||    
T  39144686 tatattctactttacatctatgataaaggagaatgcaccaatacttaacaaagacac 39144742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 33994656 - 33994743
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||  ||||| |  | ||| | |||||||||||| |||||||||||||||||  | |||||| ||||||||||    
T  33994656 ttataactctaattaataccactttcatcattctcagttcaatatattccactttacatttatgatagtggagaatgcaccaatactt 33994743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 538 - 601
Target Start/End: Original strand, 45241008 - 45241071
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacattta 601  Q
    |||||||||| ||||||||| ||||||||  ||||||| |||||| ||||||||||| ||||||    
T  45241008 aattataactataattaatactacttttatcactcttagttcaatgtattctactttgcattta 45241071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 538 - 625
Target Start/End: Original strand, 52325174 - 52325261
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatac 625  Q
    |||||||||||||||||||| ||||||    | ||| |||||||||||||| ||||| |||||||||||  | |||||| ||||||||    
T  52325174 aattataactctaattaatactactttcgtcattctcaattcaatatattccactttgcatttatgatagcgtagaatgcaccaatac 52325261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 575 - 650
Target Start/End: Complemental strand, 54458382 - 54458307
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    |||||||||||||| |||||||||||||||||| | |||||| ||| ||||||  ||||  |||| ||||||||||    
T  54458382 aattcaatatattccactttacatttatgataatggagaatgcacccatacttaacaaaatcacttaaaatcattt 54458307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 53876544 - 53876478
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||| |||||||||| ||||||| |  ||||| |||||||||||||  |||||||||||||||||    
T  53876544 ttataattctaattaattttactttcatcactctcaattcaatatatttcactttacatttatgata 53876478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 658
Target Start/End: Original strand, 8498254 - 8498371
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactc 640  Q
    ||||||| ||| ||||  ||||||||| ||||| ||||||||||||| |||| | |||||| | ||| || ||||| ||||||||||  | || ||||||    
T  8498254 tataactataagtaattctacttttaccactctcaattcaatatattttactctgcatttaaggtaaggaggaatgcaccaatacttaaccaaaacactc 8498353  T
Q  641 aaaatcatttctctctct 658  Q
    ||||| || | |||||||    
T  8498354 aaaattatatttctctct 8498371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 625
Target Start/End: Complemental strand, 32827412 - 32827327
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatac 625  Q
    |||||||||||||||||| |||||| |  | |  ||||||||||||||  |||||||||||||||||  | |||||| ||||||||    
T  32827412 ttataactctaattaatactactttcatcatttctaattcaatatatttcactttacatttatgatagtggagaatgcaccaatac 32827327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 538 - 627
Target Start/End: Complemental strand, 34081165 - 34081076
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||| | ||||||||| ||||||||  | ||| |||| |||||||| ||||||||||||||| |||  | |||||||| |||||||    
T  34081165 aattataaatttaattaatactacttttatcattctcaatttaatatattatactttacatttatggtaagaaggaatgtactaatactt 34081076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 5245411 - 5245498
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||  ||||| |  ||||| |||||||||||||| |||||  ||||||||||  | |||||  ||||||||||    
T  5245411 ttataactctaattaataccactttcatcactctcaattcaatatattccactttgtatttatgatattggagaatacaccaatactt 5245498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 608
Target Start/End: Complemental strand, 49122213 - 49122174
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaa 608  Q
    |||| ||||||||||||||||||||| |||||||||||||    
T  49122213 actcataattcaatatattctactttgcatttatgataaa 49122174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 54122332 - 54122245
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||| |||| |||||| || |||   |||||||||||||  ||||| |||||||||||  | |||||| ||||||||||    
T  54122332 ttataactctaatcaatactactttcacaacttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatactt 54122245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 8706145 - 8706263
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattca--atatattctactttacatttatgataaagaagaatgtaccaatacttgccaaaga 635  Q
    |||||||||||||||||||| |||||| |  ||||||| ||||  |||||||| ||||| ||||||||     |||||||| | ||||||||  |||       
T  8706145 aattataactctaattaatactactttcatcactcttagttcaatatatattccactttgcatttatg----tgaagaatgcatcaatacttaacaagag 8706240  T
Q  636 cactcaaaatcatttctctctct 658  Q
    |||| ||||||||||||||||||    
T  8706241 cacttaaaatcatttctctctct 8706263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 9058032 - 9058150
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattca--atatattctactttacatttatgataaagaagaatgtaccaatacttgccaaaga 635  Q
    |||||||||||||||||||| |||||| |  ||||||| ||||  |||||||| ||||| ||||||||     |||||||| | ||||||||  |||       
T  9058032 aattataactctaattaatactactttcatcactcttagttcaatatatattccactttgcatttatg----tgaagaatgcatcaatacttaacaagag 9058127  T
Q  636 cactcaaaatcatttctctctct 658  Q
    |||| ||||||||||||||||||    
T  9058128 cacttaaaatcatttctctctct 9058150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 15280604 - 15280670
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    ||||||| |||||||||| |||||| |  ||||  |||||||||||||| ||||| |||||||||||    
T  15280604 ttataaccctaattaatactactttcatcactcccaattcaatatattccactttccatttatgata 15280670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 603
Target Start/End: Complemental strand, 17777101 - 17777039
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatg 603  Q
    |||||||||||||||||||| ||| |  |||||  ||||||||||||| ||||| ||||||||    
T  17777101 tataactctaattaatattattttcatcactctcgattcaatatattccactttgcatttatg 17777039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 603
Target Start/End: Complemental strand, 19078402 - 19078340
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatg 603  Q
    |||||||||||||||||||| ||| |  |||||  ||||||||||||| ||||| ||||||||    
T  19078402 tataactctaattaatattattttcatcactctcgattcaatatattccactttgcatttatg 19078340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 576 - 618
Target Start/End: Original strand, 35300672 - 35300714
Alignment:
Q  576 attcaatatattctactttacatttatgataaagaagaatgta 618  Q
    |||||||||||| ||||||||||||||||||| || |||||||    
T  35300672 attcaatatattttactttacatttatgataacgatgaatgta 35300714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 43639624 - 43639558
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||| |||||| || |||   |||||||||||||  ||||| |||||||||||    
T  43639624 ttataactctaattaatactactttcacaacttccaattcaatatatttcactttgcatttatgata 43639558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 604
Target Start/End: Complemental strand, 50150477 - 50150411
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatga 604  Q
    |||||||| |||||||||||||| ||| || ||||  |||| |||||||| || |||||||||||||    
T  50150477 aattataattctaattaatattattttcaccactcccaatttaatatattttaatttacatttatga 50150411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 468
Target Start/End: Original strand, 9218039 - 9218072
Alignment:
Q  435 atactcgctccgtcccgtaataactgagtcattt 468  Q
    |||||| |||||||||||||||||||||||||||    
T  9218039 atactccctccgtcccgtaataactgagtcattt 9218072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 575 - 628
Target Start/End: Complemental strand, 53583633 - 53583580
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatacttg 628  Q
    ||||| |||||||||||||| ||||||| |||| |||||||| | |||||||||    
T  53583633 aattccatatattctactttgcatttataataatgaagaatgcatcaatacttg 53583580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 575 - 627
Target Start/End: Complemental strand, 14756187 - 14756135
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||| ||||||||||||||| |||||||||||  | ||||||||||| |||||    
T  14756187 aatttaatatattctactttgcatttatgatagtggagaatgtaccagtactt 14756135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 607
Target Start/End: Complemental strand, 29807190 - 29807126
Alignment:
Q  543 taactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||| | ||||||||| |||||  ||| | ||||||||||||| || ||||||||||||||||    
T  29807190 taactcgagttaatattatttttatcactttcaattcaatatattttattttacatttatgataa 29807126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 575 - 655
Target Start/End: Original strand, 31650945 - 31651024
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctc 655  Q
    |||| ||||||||||| |||  ||||||||||| ||| |||| || |||||||| | |||||||| |||||||||| ||||    
T  31650945 aatttaatatattctaatttgtatttatgataatgaaaaatgcacaaatacttgac-aagacacttaaaatcatttttctc 31651024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 540 - 600
Target Start/End: Complemental strand, 36097763 - 36097703
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    ||||||| || |||||||||||||| |  ||||| |||||||||||||| ||||| |||||    
T  36097763 ttataacgctgattaatattactttcatcactctcaattcaatatattccactttgcattt 36097703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 575 - 627
Target Start/End: Original strand, 44234124 - 44234176
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||  ||||| |||||| ||||| |||||| ||||||||||||    
T  44234124 aattcaatatatttcactttgcatttacgataatgaagaacgtaccaatactt 44234176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 436 - 476
Target Start/End: Original strand, 47496072 - 47496112
Alignment:
Q  436 tactcgctccgtcccgtaataactgagtcatttataaaaaa 476  Q
    ||||| |||||||| |||||||||||||||||| |||||||    
T  47496072 tactccctccgtcctgtaataactgagtcatttgtaaaaaa 47496112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 4e-52; HSPs: 100)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 129 - 405
Target Start/End: Complemental strand, 8571972 - 8571696
Alignment:
Q  129 caggaatgggatccagcagagaaggaactcattcgaagatggtgtttcgggaacaacatgccccatcccaccagggaggaacttcacatatattcttcaa 228  Q
    |||||||||  ||||||||||||||||||||| ||||||||| || |  ||||||||||| ||||| ||||| || | |||||||||||| || ||||||    
T  8571972 caggaatggagtccagcagagaaggaactcatacgaagatggagtgtttggaacaacatgtcccattccacctggaaagaacttcacatacatacttcaa 8571873  T
Q  229 gtgaaggatcaaattggaagcttttactactttccatctctagcatttcaaaaagcagctggtggttttggaggcattaggatactcagtagacctagaa 328  Q
    || || ||||||||||| || || || || || |||||||| ||||| || ||||| ||||||||||||||||| ||||| || || ||||| || ||||    
T  8571872 gtaaaagatcaaattggtagtttctattatttcccatctcttgcattccacaaagctgctggtggttttggaggaattagaattctaagtaggccaagaa 8571773  T
Q  329 ttccagtccctttccctgaaccagctggagattacactgtccttattggtgattggtacaagtccaaccatacggta 405  Q
    |||| || || |||  ||| || ||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||    
T  8571772 ttcccgttcccttcgatgatcccgctggtgattacactgtcctcattggagattggtacaagtccaaccacacggta 8571696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 500 - 658
Target Start/End: Complemental strand, 52382536 - 52382377
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnn-aattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    ||||||| ||||||||||||||||||||||         ||||||||||||||||||||||||||| || ||||| ||||||||||||| ||||||||||    
T  52382536 catttcaattttcaatacaacattaattacttttttttcaattataactctaattaatattactttcaccactctcaattcaatatattttactttacat 52382437  T
Q  599 ttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||||||||| | ||||||||| | ||||||||||||||||| |||||||||    
T  52382436 ttatgataaagaagaatgcatcaatacttgactaagacactcaaaatcatctctctctct 52382377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 501 - 658
Target Start/End: Complemental strand, 36232937 - 36232780
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||||||||||||| ||||||||||||        |||||||||||||||||||| |||||| || | |   ||||||||||||||||||||| ||||    
T  36232937 atttcagttttcaataaaacattaattacttttttccaattataactctaattaatactactttcaccatttccaattcaatatattctactttatattt 36232838  T
Q  601 atgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  36232837 atgataaagaagaatgcaccaatacttgtcaaagacactcaaaatcatttttctctct 36232780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 27210078 - 27209958
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||| |  ||| || ||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||    
T  27210078 aattataactctaattaatactcttttcaccactctcaattcaatatattctcctttacatttatgataaagaagaatgcaccaatacttgtcaaagaca 27209979  T
Q  638 ctcaaaatcatttctctctct 658  Q
    ||||||||||||| |||||||    
T  27209978 ctcaaaatcatttttctctct 27209958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 452 - 658
Target Start/End: Complemental strand, 5116023 - 5115816
Alignment:
Q  452 taataactgagtcatttataaaaaat-tactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaattataactcta 550  Q
    |||||||||| |||||| |||||||  || |||| |  |||| || |||||||||| ||||||||| ||||| ||||||        ||||||| |||||    
T  5116023 taataactgaatcatttgtaaaaaaaatattgtcccaataatattgattcatttcacttttcaatataacatcaattacttttttcaaattatagctcta 5115924  T
Q  551 attaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    |||||||||||||| ||  |||| ||||||||||||||||  |||||||||||||||||||||||| | ||||||||| |||||||||||||||||| |     
T  5115923 attaatattactttcacctctctcaattcaatatattctatattacatttatgataaagaagaatgcatcaatacttgtcaaagacactcaaaatcaatg 5115824  T
Q  651 ctctctct 658  Q
    ||||||||    
T  5115823 ctctctct 5115816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 500 - 650
Target Start/End: Original strand, 14352525 - 14352675
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||||||||| |||||||||||||||         |||||||||| |||||||||||||||| || ||||  ||||||||||||||||||||| |||    
T  14352525 catttcagttttctatacaacattaattattttttctcaattataactgtaattaatattactttcaccactcccaattcaatatattctactttatatt 14352624  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    || |||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  14352625 tacgataaagaagaatgcaccaatacttgacaaagacactcaaaaccattt 14352675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 556 - 656
Target Start/End: Complemental strand, 37281090 - 37280990
Alignment:
Q  556 tattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctc 655  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  37281090 tattactttcactactcccaattcaatatattctactttacatttatgataaaaaagaatgcaccaatacttgacaaagacactcaaaatcatttctctc 37280991  T
Q  656 t 656  Q
    |    
T  37280990 t 37280990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 490 - 628
Target Start/End: Complemental strand, 12267790 - 12267652
Alignment:
Q  490 aatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattct 589  Q
    |||||| | |||||||| |||||||||| |||||||||||        ||||||||||||| |||||| |||||| || ||||  |||||||||||||||    
T  12267790 aatcttgactcatttcacttttcaatacgacattaattacttttttccaattataactctagttaatactactttcacaactcccaattcaatatattct 12267691  T
Q  590 actttacatttatgataaagaagaatgtaccaatacttg 628  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12267690 actttacatttatgataaagaagaatgtaccaatacttg 12267652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 499 - 658
Target Start/End: Complemental strand, 11426019 - 11425860
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| ||| |||||||| |||||||||        |||||||||| ||||||||| |||||| ||||||   ||| ||||||||||||||||||||    
T  11426019 tcatttcactttccaatacaatattaattactttttttcaattataactttaattaatactactttcactacttccaatacaatatattctactttacat 11425920  T
Q  599 ttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||  |||| |||||||    
T  11425919 ttatgataaagaagaatggaccaatacttaacaaagacactcaaaactatttttctctct 11425860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 499 - 658
Target Start/End: Original strand, 16040035 - 16040194
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| ||| |||||||| |||||||||        |||||||||||||| |||||||||||| || |||   ||| ||||||||||||||||||||    
T  16040035 tcatttcactttccaatacaatattaattactttttttcaattataactctaaataatattactttcaccacttccaatacaatatattctactttacat 16040134  T
Q  599 ttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||||||||| ||||||||||  |||||||||| |||| ||||| |||||||    
T  16040135 ttatgataaagaagaatgaaccaatacttaacaaagacacttaaaaccatttttctctct 16040194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 436 - 615
Target Start/End: Original strand, 50333830 - 50334009
Alignment:
Q  436 tactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnn 535  Q
    ||||| ||||| ||| |||||||||||||||||  |||||| || |||| |   |||||| || ||||||| ||| ||||| ||||||||||||          
T  50333830 tactccctccgacccataataactgagtcatttgcaaaaaaatattgtcgcaagaatcttgatccatttcactttccaatataacattaattactttttt 50333929  T
Q  536 nnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaat 615  Q
      |||||||||||||||||||| |||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||    
T  50333930 ttaattataactctaattaataatactttcaccactctcaattcaatatactctactttacatttatgataaagaagaat 50334009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 541 - 650
Target Start/End: Complemental strand, 705457 - 705348
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactc 640  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||| ||||||||||||||||| || |||||||   ||||||| ||    
T  705457 tataactctaattaatattacttttaccactctcaattcaatatattatactttacatctatgataaagaagaatgcactaatacttaataaagacattc 705358  T
Q  641 aaaatcattt 650  Q
    ||||||||||    
T  705357 aaaatcattt 705348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 435 - 616
Target Start/End: Original strand, 2886065 - 2886246
Alignment:
Q  435 atactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnn 534  Q
    |||||| ||||||||| |||||||||||||||||  |||||| || |||| | | ||  || ||  |||||| |||||||||||| |||||||||         
T  2886065 atactccctccgtcccataataactgagtcatttgcaaaaaaatattgtcccagaaaaattgatcaatttcacttttcaatacaatattaattacttttt 2886164  T
Q  535 nnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatg 616  Q
       ||||||||| |||||||||| |||||| || ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  2886165 tccaattataacactaattaatactactttcaccactctcaattcaatatattctactttgcatttatgataaagaagaatg 2886246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 501 - 658
Target Start/End: Original strand, 31798378 - 31798535
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| ||||||||| || |||||||||        ||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| |||||    
T  31798378 atttcacttttcaatataatattaattacttttttccaattataacactaattaatattactttcactactctcaattcaatatattctactttgcattt 31798477  T
Q  601 atgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||| |||| ||||||| |||  || | ||||||||| ||| | |||||||    
T  31798478 atgataaagaataatgcaccaatagttgataagggcactcaaaaccatatttctctct 31798535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 559 - 656
Target Start/End: Original strand, 37495847 - 37495944
Alignment:
Q  559 tacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctct 656  Q
    |||||| |||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||  ||||||| ||||||||||||||||||    
T  37495847 tactttcactactcccaattcaatatattctactttacatttataataaagaagaatgcaccaatacttgataaagacattcaaaatcatttctctct 37495944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 497 - 658
Target Start/End: Complemental strand, 47293750 - 47293590
Alignment:
Q  497 attcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttac 596  Q
    |||||||||| ||||||| ||||||||||||||        ||| |||| ||||||||||| ||| || || || |  |||||||||||||||| ||||     
T  47293750 attcatttcacttttcaaaacaacattaattactttttttcaatgataattctaattaatactacattcaccacgcc-aattcaatatattctaatttat 47293652  T
Q  597 atttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||||||||||| ||||||||||| |||| ||||||||||||||| ||||||||    
T  47293651 atttatgataaagaagaatgcaccaatacttgacaaaaacactcaaaatcattcctctctct 47293590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 508 - 658
Target Start/End: Complemental strand, 37925387 - 37925237
Alignment:
Q  508 ttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||| |||||||||        ||||||||| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||    
T  37925387 ttttcaatacaatattaattactttttttcaattataacactaattaatattactttcaccactctcaattcaatatattctactttgcatttatgataa 37925288  T
Q  608 agaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||| |||| ||||||| |||  ||   |||| |||||||||| |||||||    
T  37925287 agaaaaatgcaccaataattgataagagcactaaaaatcatttttctctct 37925237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 4466265 - 4466145
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||| |||||| || |||   ||| |||||||||||||||||||||||||||||||||||||| ||||||||||  |||||  |    
T  4466265 aattataactctaattaatactactttcaccacttccaatacaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaaggta 4466166  T
Q  638 ctcaaaatcatttctctctct 658  Q
    ||||||  ||||| |||||||    
T  4466165 ctcaaacccatttttctctct 4466145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 500 - 658
Target Start/End: Original strand, 26583687 - 26583845
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||||||||||| |||||||||        ||||||||| |||||||||| || ||| |  ||||  |||||||||||||||| ||| ||||    
T  26583687 catttcacttttcaatacaatattaattactttattccaattataacactaattaataatattttcatcactcccaattcaatatattctattttgcatt 26583786  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||||||||| ||||||| |||  |||| |||||||| |||||| |||||||    
T  26583787 tatgataaagaagaatgcaccaatagttgataaaggcactcaaactcatttttctctct 26583845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 28706735 - 28706614
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctacttt-acatttatgataaagaagaatgtaccaatacttgccaaagac 636  Q
    ||||||||||||||||||||| ||||| |  |||  ||||||||||||||||| ||| ||||||||||||||||| |||| | ||||||||| ||||| |    
T  28706735 aattataactctaattaatataactttcatcactgctaattcaatatattctatttttacatttatgataaagaaaaatgcatcaatacttgacaaaggc 28706636  T
Q  637 actcaaaatcatttctctctct 658  Q
    |||||||| ||||| |||||||    
T  28706635 actcaaaaccatttttctctct 28706614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 27932944 - 27932824
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||  ||||||||||  || || || ||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| ||| ||||    
T  27932944 aattataatactaattaatacaaccttcaccactctcaattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgacaaggaca 27932845  T
Q  638 ctcaaaatcatttctctctct 658  Q
    ||||||  ||||| |||||||    
T  27932844 ctcaaacgcatttttctctct 27932824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 29756253 - 29756133
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||| |||||||||| |||||| || ||||  |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||  || | ||    
T  29756253 aattataacactaattaatactactttcaccactcccaattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataagggca 29756154  T
Q  638 ctcaaaatcatttctctctct 658  Q
    ||||||  ||||| |||||||    
T  29756153 ctcaaacccatttttctctct 29756133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 500 - 655
Target Start/End: Complemental strand, 29225556 - 29225402
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| ||| |||||||| |||||||||        ||||||||||| ||| |||| |||||| || |||   |||||||||||||||||||| ||||    
T  29225556 catttcattttccaatacaatattaattacttttttccaattataactcaaat-aatactactttcaccacttccaattcaatatattctactttccatt 29225458  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctc 655  Q
    ||||||||| ||||||| ||||||||||  ||||| ||||||||||||||| ||||    
T  29225457 tatgataaaaaagaatgcaccaatacttaacaaaggcactcaaaatcatttttctc 29225402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 445 - 658
Target Start/End: Complemental strand, 37541321 - 37541104
Alignment:
Q  445 cgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnn--aatta 542  Q
    |||||| |||||||||||||||||  |||||| || |||| | | ||  || ||| |||||| |||||||||||| |||||||||          |||||    
T  37541321 cgtcccataataactgagtcatttgcaaaaaaatattgtctcagaaagattgatttatttcacttttcaatacaatattaattactactttttccaatta 37541222  T
Q  543 taactctaattaatat--tacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactc 640  Q
    ||||  ||||||||||  |||||| || |||   |||||||||||||||||||||||||||| ||||||||||||| ||||||| |||  ||||||| ||    
T  37541221 taacattaattaatatactactttcaccacttccaattcaatatattctactttacatttataataaagaagaatgcaccaatagttgataaagacattc 37541122  T
Q  641 aaaatcatttctctctct 658  Q
    |||| ||||| |||||||    
T  37541121 aaaaccatttttctctct 37541104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 543 - 644
Target Start/End: Complemental strand, 21304912 - 21304811
Alignment:
Q  543 taactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaa 642  Q
    ||||| |||||| || || ||| || ||||||||||||||||||| ||||||| ||||||||||||||| |||| | ||||||||| |||||||||||||    
T  21304912 taactttaattattaatattttcaccactcttaattcaatatattatactttatatttatgataaagaaaaatgcatcaatacttgacaaagacactcaa 21304813  T
Q  643 aa 644  Q
    ||    
T  21304812 aa 21304811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 442 - 643
Target Start/End: Original strand, 29225654 - 29225854
Alignment:
Q  442 ctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaatt 541  Q
    ||||| ||| ||||||||||||||||| ||||||| || |||| |   ||  || |  ||||||| |||||||||||| | |||||||        ||||    
T  29225654 ctccgccccataataactgagtcatttgtaaaaaaatattgtcccaaaaagattgacccatttcacttttcaatacaataataattacttttttccaatt 29225753  T
Q  542 ataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactca 641  Q
    |||||||||||||||| |||||| |  ||||  |||||||||||||||||||| ||||||||||||  | ||||| ||||||||||| | ||||||||||    
T  29225754 ataactctaattaatactactttcatcactcccaattcaatatattctactttgcatttatgataagaatgaatgcaccaatacttgac-aagacactca 29225852  T
Q  642 aa 643  Q
    ||    
T  29225853 aa 29225854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 497 - 658
Target Start/End: Original strand, 40061765 - 40061926
Alignment:
Q  497 attcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttac 596  Q
    |||||||| | |||||||| ||| |||||||||        |||||||| |||||||||||||||||| |  ||||| |||||||||||||||| ||| |    
T  40061765 attcattttatttttcaatgcaatattaattactttttttaaattataattctaattaatattactttcatcactctcaattcaatatattctaatttgc 40061864  T
Q  597 atttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||| ||| |||||| |||||||||  ||  ||| | |||||||||| |||||||    
T  40061865 atttatgataatgaaaaatgtaacaatacttgataagaacatttaaaatcatttttctctct 40061926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 540 - 658
Target Start/End: Complemental strand, 2219557 - 2219439
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| ||| || || |||   ||||||||||||| |||||||||||||||||||||||||||| | ||||  ||   |||||||||    
T  2219557 ttataactctaattaatactacgttcacaacttccaattcaatatattttactttacatttatgataaagaagaatgcatcaatcttttataaagacact 2219458  T
Q  640 caaaatcatttctctctct 658  Q
    ||||||||||  |||||||    
T  2219457 caaaatcattattctctct 2219439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 500 - 598
Target Start/End: Complemental strand, 20988631 - 20988533
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    ||||||| ||||||||||||||||||||||        ||||||||||||||||||||||| ||| || ||||  ||||||||||||||||||||||||    
T  20988631 catttcaattttcaatacaacattaattactttttttcaattataactctaattaatattattttcaccactcccaattcaatatattctactttacat 20988533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 556 - 658
Target Start/End: Complemental strand, 26924213 - 26924111
Alignment:
Q  556 tattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctc 655  Q
    ||||||||| || ||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||| |||  || | |||||||| |||||| ||||    
T  26924213 tattactttcaccactctcaattcaatatattatactttgcatttatgataaagaagaatgcaccaatagttgataagggcactcaaactcatttttctc 26924114  T
Q  656 tct 658  Q
    |||    
T  26924113 tct 26924111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 501 - 650
Target Start/End: Original strand, 17342788 - 17342937
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| |||||||||||| |||||||||         ||||||||||||||||||| ||||||||  ||||| |||||||||||||  |||||  ||||    
T  17342788 atttcacttttcaatacaatattaattactattttttcattataactctaattaatactacttttatcactctcaattcaatatatttcactttgtattt 17342887  T
Q  601 atgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    ||||||| | |||||| ||||||||||  |||| ||||| |||| |||||    
T  17342888 atgataatggagaatgcaccaatacttaacaaaaacacttaaaaccattt 17342937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 501 - 658
Target Start/End: Complemental strand, 24131548 - 24131391
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| |||||||| ||| |||||||||        ||||||||| |||||||||| |||||| || ||||  ||||||||||||| |||||| |||||    
T  24131548 atttcacttttcaatgcaatattaattacttttttccaattataacactaattaatactactttcaccactcccaattcaatatattatactttgcattt 24131449  T
Q  601 atgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||||||| ||| ||| |||  || | || |||||| ||||| |||||||    
T  24131448 atgataaagaagaatgcacctatagttgataagggcattcaaaaccatttttctctct 24131391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 46363522 - 46363401
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaag-ac 636  Q
    |||||||||  ||||||||| |||||  || ||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||||| |||  ||||  |    
T  46363522 aattataacaataattaatactacttccaccactctcaattcaatatattttactttgcatttatgataaagaagaatgcaccaatagttgataaagtgc 46363423  T
Q  637 actcaaaatcatttctctctct 658  Q
    |||||||  |||||||||||||    
T  46363422 actcaaacacatttctctctct 46363401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 500 - 597
Target Start/End: Complemental strand, 5359415 - 5359319
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttaca 597  Q
    ||||||||||||||||||||||||||||||        |||||||| |||||||||||||||||| || ||||| || ||||||||||||||||||||    
T  5359415 catttcagttttcaatacaacattaattacttttttc-aattataattctaattaatattactttcaccactctcaaatcaatatattctactttaca 5359319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 658
Target Start/End: Original strand, 33149274 - 33149390
Alignment:
Q  542 ataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactca 641  Q
    ||||| |||||||||| |||||| |  ||||| |||||||||||||||||||| ||||||||||||||||||||  ||||||| ||   || ||||||||    
T  33149274 ataacactaattaatactactttcatcactctcaattcaatatattctactttgcatttatgataaagaagaatccaccaataattaataaggacactca 33149373  T
Q  642 aaatcatttctctctct 658  Q
    ||  ||||| |||||||    
T  33149374 aatccatttttctctct 33149390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 551 - 658
Target Start/End: Complemental strand, 40754511 - 40754403
Alignment:
Q  551 attaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata-cttgccaaagacactcaaaatcatt 649  Q
    ||||||| |||||| || ||||| |||| ||||||||||||||| ||||||||||||||||||||| |||||||  |||  || | ||||||||| ||||    
T  40754511 attaatactactttcacaactctcaatttaatatattctactttgcatttatgataaagaagaatgcaccaataggttgataagggcactcaaaaccatt 40754412  T
Q  650 tctctctct 658  Q
    |||||||||    
T  40754411 tctctctct 40754403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 538 - 650
Target Start/End: Original strand, 46273157 - 46273269
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||| | |||||||||||| ||| || | ||| |||| |||| ||||||||||||||||| |||||||||||||| | ||||||||| |||| |||    
T  46273157 aattataattttaattaatattattttcaccattctgaatttaatacattctactttacatttaagataaagaagaatgcatcaatacttgacaaaaaca 46273256  T
Q  638 ctcaaaatcattt 650  Q
     ||||||| ||||    
T  46273257 ttcaaaattattt 46273269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 582 - 658
Target Start/End: Original strand, 50926788 - 50926864
Alignment:
Q  582 tatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||  || |||||| ||||| |||||||    
T  50926788 tatattctactttacatttatgataaagaagaatgcaccaatacttgacaaatgcattcaaaaccatttttctctct 50926864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 540 - 658
Target Start/End: Complemental strand, 51749292 - 51749174
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    ||||||||||||||||||||||||| |  ||||  |||||||||||||| ||||| |||||||||||| | |||||  ||||||||||  |||  |||||    
T  51749292 ttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgataatggagaataaaccaatacttaacaagaacact 51749193  T
Q  640 caaaatcatttctctctct 658  Q
     ||||||| || |||||||    
T  51749192 taaaatcagttttctctct 51749174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 543 - 616
Target Start/End: Original strand, 50086011 - 50086084
Alignment:
Q  543 taactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatg 616  Q
    ||||||||||||||| || ||| || || |  ||||||||||||||||||||||||||||||||||||||||||    
T  50086011 taactctaattaatactattttcaccacaccaaattcaatatattctactttacatttatgataaagaagaatg 50086084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 618
Target Start/End: Complemental strand, 10587692 - 10587612
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgta 618  Q
    ||||||||| |||||||||| |||||| |  ||||| |||||||||||||||| ||| |||||||||||| ||||||||||    
T  10587692 aattataacactaattaatactactttcatcactctcaattcaatatattctattttgcatttatgataatgaagaatgta 10587612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 650
Target Start/End: Original strand, 45305850 - 45305961
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||| ||||||| |||| ||| |  | ||| |||||||||||||||||||| |||||||||||| |||||||| |  |||||||| | ||||||    
T  45305850 aattataactttaattaaaattattttcatcaatctcaattcaatatattctactttgcatttatgataatgaagaatgcataaatacttgac-aagaca 45305948  T
Q  638 ctcaaaatcattt 650  Q
    |||||||| ||||    
T  45305949 ctcaaaattattt 45305961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 550 - 658
Target Start/End: Original strand, 51049517 - 51049624
Alignment:
Q  550 aattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatt 649  Q
    |||||||| |||||| || ||||  ||||||||||||| |||||||||||||||||||| ||||||| || || |||||  ||||||| |||||| ||||    
T  51049517 aattaatactactttcacaactcccaattcaatatattatactttacatttatgataaaaaagaatgcactaa-acttgataaagacattcaaaaccatt 51049615  T
Q  650 tctctctct 658  Q
    | |||||||    
T  51049616 tttctctct 51049624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 606
Target Start/End: Original strand, 43895805 - 43895912
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||          ||| ||||||||||||||||| ||||| |||||| |||||||||||||| ||||| |||    
T  43895805 tcatttcacttttcaatacaatattaattactttttcctctttacaactctaattaatattatttttattactctcaattcaatatattcaactttgcat 43895904  T
Q  599 ttatgata 606  Q
    ||||||||    
T  43895905 ttatgata 43895912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 606
Target Start/End: Complemental strand, 48242740 - 48242633
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||          |||||||| ||||||||||||||||||  | ||| |||||||||||||| |||||||||    
T  48242740 tcatttcacttttcaatacaatattaattacttttttctttttataactttaattaatattacttttatcattctcaattcaatatattccactttacat 48242641  T
Q  599 ttatgata 606  Q
    ||||||||    
T  48242640 ttatgata 48242633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 538 - 608
Target Start/End: Original strand, 44580513 - 44580583
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaa 608  Q
    ||||||||| |||||||||||||| || || |||| ||||| ||||||||||||||| |||||||||||||    
T  44580513 aattataacactaattaatattacattcaccactcctaatttaatatattctactttgcatttatgataaa 44580583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 500 - 597
Target Start/End: Original strand, 16451590 - 16451687
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttaca 597  Q
    ||||||| ||||||||||||||||||||||        |||||||||| ||||||||| |||||| || ||||| |||||||||||||  ||||||||    
T  16451590 catttcacttttcaatacaacattaattacttttttccaattataactttaattaatactactttcacaactctcaattcaatatatttaactttaca 16451687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 500 - 597
Target Start/End: Original strand, 16460743 - 16460840
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttaca 597  Q
    ||||||| ||||||||||||||||||||||        |||||||||| ||||||||| |||||| || ||||| |||||||||||||  ||||||||    
T  16460743 catttcacttttcaatacaacattaattacttttttccaattataactttaattaatactactttcacaactctcaattcaatatatttaactttaca 16460840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 500 - 644
Target Start/End: Original strand, 2571323 - 2571465
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||||||||||||| |||||||        ||| ||||||||| |||||| |||||| |  ||||| |||||||||||||||||||| ||||    
T  2571323 catttcacttttcaatacaacaataattactttttccaaat-ataactctagttaatactactttcatcactctcaattcaatatattctactttgcatt 2571421  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    || |||||  || |||| ||||||||||  | |||||||||||||    
T  2571422 taggataagaaataatgcaccaatacttaac-aagacactcaaaa 2571465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 654
Target Start/End: Complemental strand, 13500840 - 13500724
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||| ||||||||||| |||||| |  ||||  |||||||||| ||| ||||| |||||||||||  |||||||| |||||||| |  ||||  ||    
T  13500840 aattataattctaattaatactactttcagcactcccaattcaatattttccactttgcatttatgatagtgaagaatgcaccaatacataacaaaagca 13500741  T
Q  638 ctcaaaatcatttctct 654  Q
    || ||||||||||||||    
T  13500740 cttaaaatcatttctct 13500724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 638
Target Start/End: Complemental strand, 18186317 - 18186217
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||| |||||| || ||||  |||||| |||||| ||| ||| |||||||||||| |||||||   ||||||||  ||||||||    
T  18186317 aattataactctaattaatactactttcaccactcccaattcagtatattttacattatatttatgataaaaaagaatgcgtcaatacttaacaaagaca 18186218  T
Q  638 c 638  Q
    |    
T  18186217 c 18186217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 546 - 617
Target Start/End: Original strand, 167489 - 167560
Alignment:
Q  546 ctctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgt 617  Q
    |||||||||||||| |||||| |||||| |||||||||| ||||  ||||||||||||||||  ||||||||    
T  167489 ctctaattaatatttcttttattactctcaattcaatatcttctcatttacatttatgataataaagaatgt 167560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 628
Target Start/End: Complemental strand, 3718957 - 3718870
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttg 628  Q
    ||||||||||||||||| ||| || |  ||||| ||||||||||||| ||||||||||||||||||| ||  |||| || ||||||||    
T  3718957 tataactctaattaatactaccttcatcactctcaattcaatatattatactttacatttatgataatgataaatgcacaaatacttg 3718870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 7785383 - 7785296
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| ||||||||   |||| |||||||||||||  |||||||||||||||||  | |||||| | ||||||||    
T  7785383 ttataactctaattaatactacttttatcgctctcaattcaatatatttcactttacatttatgatagtggagaatgcatcaatactt 7785296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 25983737 - 25983650
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||| |||||||||||| ||| |  ||||| ||||||| |||||||| ||| ||||||||||||| | ||||| ||||||||||    
T  25983737 ttataactttaattaatattaatttcatcactctaaattcaacatattctattttgcatttatgataaaaatgaatgcaccaatactt 25983650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 500 - 658
Target Start/End: Original strand, 27831804 - 27831963
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattata-actctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    ||||||| |||||||| |||||||||||||        ||||||| ||||||||||||| |||||| |  ||||  |||||||||| ||| ||||| |||    
T  27831804 catttcacttttcaatgcaacattaattacctttttccaattatacactctaattaatactactttcatcactcccaattcaatatcttccactttgcat 27831903  T
Q  599 ttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||| |  ||||| ||||||||||| ||| | |||| ||||  |||| |||||||    
T  27831904 ttatgataatggtgaatgcaccaatacttgacaagggcacttaaaactatttttctctct 27831963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 583 - 642
Target Start/End: Complemental strand, 31634359 - 31634300
Alignment:
Q  583 atattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaa 642  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||  |||||||||||||    
T  31634359 atattctactttacatttatgataaagaggaatgcatcaatacttaacaaagacactcaa 31634300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 50267547 - 50267460
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||| |||||||||||||||||| |  | ||  |||||||||||||  |||||||||||||||||| | |||||| ||||||||||    
T  50267547 ttataattctaattaatattactttcatcattcccaattcaatatatttcactttacatttatgataatggagaatgcaccaatactt 50267460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 538 - 605
Target Start/End: Complemental strand, 52146766 - 52146699
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgat 605  Q
    |||||||||||||||||||| |||||| || ||||| ||||| | |||||||||||| ||||||||||    
T  52146766 aattataactctaattaatactactttcacaactctcaattcgacatattctactttgcatttatgat 52146699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 627
Target Start/End: Original strand, 25842596 - 25842685
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa-agaagaatgtaccaatactt 627  Q
    |||||||||| ||||||| | |||||| |  | ||| ||| ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  25842596 aattataactataattaacactactttcatcattctcaatgcaatatattctactttacatttatgataatagaa-aatgtaccaatactt 25842685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 644
Target Start/End: Complemental strand, 30903338 - 30903233
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||||||||||||||||| ||| |  |||| |  |||||||||||||||||| |||||||||||| | | |||| || |||||||  | ||||||    
T  30903338 aattataactctaattaatattattttcatcactcctgtttcaatatattctactttgcatttatgataatggaaaatgcacaaatacttaac-aagaca 30903240  T
Q  638 ctcaaaa 644  Q
    |||||||    
T  30903239 ctcaaaa 30903233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 607
Target Start/End: Complemental strand, 19349105 - 19349036
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    ||||||||| |||||||||| |||||| |  ||||| |||||||||||||||| ||| ||||||||||||    
T  19349105 aattataaccctaattaatactactttcaaaactctcaattcaatatattctattttgcatttatgataa 19349036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 540 - 657
Target Start/End: Original strand, 32587764 - 32587881
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| || ||| |  ||||| |||||||||||||  ||||| |||||||||||| | | |||| | ||||||||  |||| |||||    
T  32587764 ttataactctaattaataataatttcatcactctcaattcaatatatttcactttgcatttatgataatggaaaatgcatcaatacttaacaaaaacact 32587863  T
Q  640 caaaatcatttctctctc 657  Q
     ||||| |||| ||||||    
T  32587864 taaaattatttttctctc 32587881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 540 - 657
Target Start/End: Original strand, 46496017 - 46496134
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| |||||| |  || | ||||||||||||||| ||||| |||||||||||| | |||||  | |||| |||  |||  |||||    
T  46496017 ttataactctaattaatactactttcatcacgcctaattcaatatattccactttgcatttatgataatggagaatacatcaatccttaacaagaacact 46496116  T
Q  640 caaaatcatttctctctc 657  Q
    ||||| ||||| ||||||    
T  46496117 caaaaccatttttctctc 46496134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 594
Target Start/End: Original strand, 4659428 - 4659484
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctacttt 594  Q
    |||| ||||| ||||||||||||||||||  |||| |||||||||||||||||||||    
T  4659428 aattttaactataattaatattacttttatcactcctaattcaatatattctacttt 4659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 580 - 656
Target Start/End: Original strand, 16956582 - 16956658
Alignment:
Q  580 aatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctct 656  Q
    |||||||||||||||| |||||||||||| ||||||| || |||||||   |||||||||||||  ||||| |||||    
T  16956582 aatatattctactttatatttatgataaataagaatgcacaaatacttaataaagacactcaaacccatttttctct 16956658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 606
Target Start/End: Original strand, 21304385 - 21304449
Alignment:
Q  542 ataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||| |||||||||||||||| |  |||||||||||||||||||  ||||| |||||||||||    
T  21304385 ataactgtaattaatattactttcatcactcttaattcaatatatttcactttgcatttatgata 21304449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 576 - 624
Target Start/End: Complemental strand, 27142996 - 27142948
Alignment:
Q  576 attcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    |||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  27142996 attcaatatattttactttacatttatcataaagaagaatgtatcaata 27142948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 539 - 607
Target Start/End: Complemental strand, 34877200 - 34877132
Alignment:
Q  539 attataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||||||||||||| ||| |  ||||  |||||||||||||| ||||| ||||||||||||    
T  34877200 attataactctaattaatattattttcatcactcacaattcaatatattcaactttgcatttatgataa 34877132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 624
Target Start/End: Complemental strand, 45889357 - 45889273
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    |||||||||||||||||| |||||| |  | || ||||||||||||||| ||||| |||||||||||| | |||||  |||||||    
T  45889357 ttataactctaattaatactactttcatcattcataattcaatatattccactttgcatttatgataatggagaatagaccaata 45889273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 5442339 - 5442426
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||| |||||||||||||||| || |||   |||||||||||||| ||||| |||||||||||  | |||||| || |||||||    
T  5442339 ttataactataattaatattactttcacaacttccaattcaatatattccactttgcatttatgatagtggagaatgcactaatactt 5442426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 538 - 608
Target Start/End: Complemental strand, 7075514 - 7075441
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaa---tatattctactttacatttatgataaa 608  Q
    |||||||||||||||||||| |||||| || ||||  |||||||   ||||||||||| |||||||||||||||    
T  7075514 aattataactctaattaatactactttcacaactccgaattcaaaactatattctactctacatttatgataaa 7075441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 8327716 - 8327803
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| |||||| |  ||||| |||||||||||||| | ||| |||||||||||  | |||||  ||||||||||    
T  8327716 ttataactctaattaatactactttcatcactctcaattcaatatattccattttgcatttatgataggggagaatagaccaatactt 8327803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 595 - 658
Target Start/End: Complemental strand, 36326259 - 36326196
Alignment:
Q  595 acatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||||| ||||||| ||||||| ||| ||||||||||||||| ||||  |||||||    
T  36326259 acatttatgataaacaagaatgcaccaatatttgacaaagacactcaaaaccattgttctctct 36326196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 635
Target Start/End: Original strand, 26040638 - 26040738
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattcta---ctttacatttatgataaagaagaatgtaccaatacttgccaaag 634  Q
    |||||||||||||||||||| | |||  || |||   || |||||||||||||   |||||||||||||||||||||||||| | ||| ||||| |||||    
T  26040638 aattataactctaattaatactgcttccaccacttccaagtcaatatattctagtactttacatttatgataaagaagaatgcatcaaaacttgacaaag 26040737  T
Q  635 a 635  Q
    |    
T  26040738 a 26040738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 616
Target Start/End: Original strand, 48391744 - 48391822
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatg 616  Q
    ||||||||  ||||||||||||||||| |  |||| ||||||||||||||  ||||||||||| |||| | ||||||||    
T  48391744 aattataatcctaattaatattactttcatcactcataattcaatatatttcactttacatttgtgatgatgaagaatg 48391822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 49494272 - 49494206
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||| |||||||||||||||| |  | |  ||||||||||||||| |||||||||||||||||    
T  49494272 ttataactttaattaatattactttcatcatttctaattcaatatattccactttacatttatgata 49494206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 658
Target Start/End: Original strand, 52432311 - 52432429
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    ||||||||||||||||| ||||||| || |||   |||||||||||||  |||||||||||||| ||   ||||||| | ||||||||  |||   ||||    
T  52432311 ttataactctaattaatgttactttcacaacttacaattcaatatatttcactttacatttatggtagtaaagaatgcatcaatacttaacaagagcact 52432410  T
Q  640 caaaatcatttctctctct 658  Q
     |||||||||| |||||||    
T  52432411 taaaatcatttttctctct 52432429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 538 - 607
Target Start/End: Complemental strand, 2246388 - 2246319
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||| |||| |||||| |||||| |  ||||| ||||||| || ||||||||||||||||||||||    
T  2246388 aattataattctagttaatactactttcatcactctcaattcaacatcttctactttacatttatgataa 2246319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 627
Target Start/End: Original strand, 12691906 - 12691990
Alignment:
Q  542 ataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||| |||||||| | |||||||| ||||||| |||   |  || |||||||||||||||||||||||| ||||||||    
T  12691906 ataactctaatttatattactgtcactactctcaattcaaaataca-tgtttgacatttatgataaagaagaatgtaacaatactt 12691990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 602 - 643
Target Start/End: Complemental strand, 20986629 - 20986588
Alignment:
Q  602 tgataaagaagaatgtaccaatacttgccaaagacactcaaa 643  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  20986629 tgataaagaagaatgcaccaatacttgacaaagacactcaaa 20986588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 606
Target Start/End: Original strand, 46536340 - 46536405
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    ||||||||||||||||| |||||| |  |||||||||| ||||||||| |||||  ||||||||||    
T  46536340 tataactctaattaatactactttcatcactcttaatttaatatattccactttgtatttatgata 46536405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 556 - 624
Target Start/End: Original strand, 5503435 - 5503503
Alignment:
Q  556 tattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    ||||||||| |  ||||| ||||||||||||| ||||||  ||| |||||||||||||||| |||||||    
T  5503435 tattactttcatcactctcaattcaatatattatactttgaattaatgataaagaagaatgcaccaata 5503503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 570 - 658
Target Start/End: Complemental strand, 25819425 - 25819338
Alignment:
Q  570 ctcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||| |||| ||||| ||||||||| |||||||||||| || ||||| |||||||  || |||| ||||||||||| |||| |||||||    
T  25819425 ctctcaatttaatattttctactttgcatttatgataaggaggaatgcaccaataaatgacaaa-acactcaaaattatttttctctct 25819338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 656
Target Start/End: Original strand, 42926133 - 42926249
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||| |||||||||||||| ||| | |  ||| |||||||||||||  | ||| |||||||||||  | |||||| ||| ||||||  |||| |||||    
T  42926133 ttataattctaattaatattaatttcattgttctgaattcaatatatttcattttgcatttatgatagtggagaatgcaccgatacttaacaaaaacact 42926232  T
Q  640 caaaatcatttctctct 656  Q
     |||||||||| |||||    
T  42926233 taaaatcatttttctct 42926249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 607
Target Start/End: Original strand, 141743 - 141802
Alignment:
Q  548 ctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||| |||||| || ||| |||||||||| ||||  ||||||||||||||||    
T  141743 ctaattaatattgcttttattattctcaattcaatatcttctcatttacatttatgataa 141802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 582 - 649
Target Start/End: Original strand, 9590553 - 9590620
Alignment:
Q  582 tatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatt 649  Q
    |||||||||||||| |||||||||||| || |||| || |||||||| ||||| |||| |||| ||||    
T  9590553 tatattctactttatatttatgataaataataatgcacaaatacttgacaaaggcacttaaaaccatt 9590620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 28277147 - 28277060
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||  ||||| |  | | | |||||||||||||  |||||||||||||||||  | |||||| ||||||||||    
T  28277147 ttataactctaattaataccactttcatcattttcaattcaatatatttcactttacatttatgatactggagaatgcaccaatactt 28277060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 28839338 - 28839425
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||| ||||||||| |||||| |  ||||  |||||||||||||| ||||| |||||||||||  | |||||  ||||||||||    
T  28839338 ttataactataattaatactactttcatcactcccaattcaatatattccactttgcatttatgatagtggagaatagaccaatactt 28839425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 538 - 625
Target Start/End: Original strand, 40988272 - 40988359
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatac 625  Q
    |||||||||| |||||||||||||||| |  |||||  ||| |||||||||||||||  |||||| |||| | |||||  ||||||||    
T  40988272 aattataactttaattaatattactttcatgactctcgatttaatatattctactttgaatttattataatggagaatacaccaatac 40988359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 575 - 658
Target Start/End: Complemental strand, 52830488 - 52830405
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||| ||||||||| |||||||||||||||||  | | |||| ||||||||||  ||||  |||||||||| |||| |||||||    
T  52830488 aattgaatatattccactttacatttatgatagtggaaaatgcaccaatacttaacaaatgcactcaaaattatttttctctct 52830405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 607
Target Start/End: Original strand, 34813917 - 34813983
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    ||||| |||||| |||| |||||| |  | ||| |||||||||||||||||||| ||||||||||||    
T  34813917 tataattctaatgaatactactttcatcattctcaattcaatatattctactttgcatttatgataa 34813983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 38664400 - 38664466
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||| |||||| |  | || ||||||||||||||| | ||| |||||||||||    
T  38664400 ttataactctaattaatactactttcatcattcctaattcaatatattcaattttgcatttatgata 38664466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 584
Target Start/End: Original strand, 40019756 - 40019802
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatat 584  Q
    ||||||||||||||||||||||||||| |  ||||| ||||||||||    
T  40019756 aattataactctaattaatattactttcatcactctgaattcaatat 40019802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 46880415 - 46880480
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||| |||||||||||| |  | ||| |||| ||||||||| |||||||||||||||||    
T  46880415 ttataactctaactaatattactttcatca-tctcaatttaatatattcaactttacatttatgata 46880480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 606 - 644
Target Start/End: Complemental strand, 47792262 - 47792224
Alignment:
Q  606 aaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    ||||||||||| ||||||| |||||||||||||||||||    
T  47792262 aaagaagaatgcaccaatatttgccaaagacactcaaaa 47792224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 612 - 658
Target Start/End: Original strand, 50086107 - 50086153
Alignment:
Q  612 gaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||| ||||||||||| ||||||||| ||||||||||| |||||||    
T  50086107 gaatgcaccaatacttgacaaagacacacaaaatcatttttctctct 50086153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 579 - 627
Target Start/End: Original strand, 25869721 - 25869769
Alignment:
Q  579 caatatattctactttacatttatgataa-agaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||||||||||| |||| |||||| ||||||||    
T  25869721 caatatattctactttacatttatgataatagaa-aatgtatcaatactt 25869769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 39420581 - 39420703
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgat---aaagaagaatgtaccaatacttgccaaag 634  Q
    |||||||| ||||||||||| |||||| |  | ||| ||||||| || || |||||| ||||||| ||   ||| || |||| ||||||||||| | |||    
T  39420581 aattataaatctaattaatactactttcataattctcaattcaacatgttttactttgcatttataataaaaaaaaacaatgcaccaatacttgac-aag 39420679  T
Q  635 acactcaaaatcatttctctctct 658  Q
    ||||||||||| |||| |||||||    
T  39420680 acactcaaaattatttttctctct 39420703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 606 - 650
Target Start/End: Original strand, 26040734 - 26040778
Alignment:
Q  606 aaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    ||||||||||| ||||||||||| |||| |||||||||| |||||    
T  26040734 aaagaagaatgcaccaatacttgacaaaaacactcaaaaccattt 26040778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 1e-46; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 443 - 650
Target Start/End: Complemental strand, 40077955 - 40077748
Alignment:
Q  443 tccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaatta 542  Q
    ||||||||| ||||||||| ||||||  |||||| || |||| |   |||||| |  ||||||||||||  ||||||||||||||||        |||||    
T  40077955 tccgtcccgaaataactgaatcattttaaaaaaaatattgtctcaaaaatcttgacccatttcagtttttgatacaacattaattactttttttcaatta 40077856  T
Q  543 taactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaa 642  Q
    |||||| ||||||||||||||| || ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  40077855 taactcaaattaatattactttcacaactccaaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagacactcaa 40077756  T
Q  643 aatcattt 650  Q
    ||||||||    
T  40077755 aatcattt 40077748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 500 - 656
Target Start/End: Original strand, 29638260 - 29638416
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| ||||||||||||||||||||||        ||||||||||||||||||||||||||| || |||| |||||||||||||| |||||||||||    
T  29638260 catttcacttttcaatacaacattaattaccttttctcaattataactctaattaatattactttcaccactcctaattcaatatattatactttacatt 29638359  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctct 656  Q
    |||||||||||| |||| ||||||||||| ||||| || |||||| ||||| |||||    
T  29638360 tatgataaagaataatgaaccaatacttgacaaaggcattcaaaaccatttttctct 29638416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 435 - 658
Target Start/End: Original strand, 14689854 - 14690077
Alignment:
Q  435 atactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnn 534  Q
    |||||| ||||||||| |||||||||||||||||  |||||| || |||| | | ||  || |  ||||||| |||||||||||| |||||||||         
T  14689854 atactccctccgtcccataataactgagtcatttgcaaaaaaatattgtcccagaaaaattgacccatttcacttttcaatacaatattaattacttttt 14689953  T
Q  535 nnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaag 634  Q
       ||||||||| |||||||||| |||||| || ||||  |||||||||||||||||||| ||||||||||||| ||||||| ||||||| |||  || |    
T  14689954 tccaattataacactaattaatactactttcaccactcccaattcaatatattctactttgcatttatgataaaaaagaatgcaccaatagttgataagg 14690053  T
Q  635 acactcaaaatcatttctctctct 658  Q
    |||||||||| ||||| |||||||    
T  14690054 acactcaaaaccatttttctctct 14690077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 500 - 658
Target Start/End: Original strand, 28791267 - 28791425
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||||||| |||||||||||||        |||||||||||||||||||| |||||| || ||||  |||||||||||||||| ||||||||    
T  28791267 catttcacttttcaatgcaacattaattacttttctccaattataactctaattaatactactttcacaactcccaattcaatatattctagtttacatt 28791366  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||||||||| |||||||||||  |||| |||||||||  |||| |||||||    
T  28791367 tatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactatttttctctct 28791425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 500 - 642
Target Start/End: Original strand, 32678994 - 32679136
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| ||||||||||||||||||||||        |||||||||||||||||||| ||||||||| ||||| |||| |||||||| |||||||||||    
T  32678994 catttcacttttcaatacaacattaattaccttttttcaattataactctaattaatactacttttacaactctcaatttaatatattttactttacatt 32679093  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaa 642  Q
    |||||||||||| |||| |||||||||||  |||| |||||||    
T  32679094 tatgataaagaataatgcaccaatacttgaaaaaggcactcaa 32679136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 541 - 658
Target Start/End: Original strand, 11637140 - 11637256
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactc 640  Q
    ||||||| ||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||    
T  11637140 tataactataattaatactactttcaccactctcaattcaatatattctactttacatttatgataaagaataatgtatcaatacttggcaaagacactc 11637239  T
Q  641 aaaatcatttctctctct 658  Q
    |||| ||||| |||||||    
T  11637240 aaaa-catttttctctct 11637256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 490 - 644
Target Start/End: Original strand, 14117411 - 14117565
Alignment:
Q  490 aatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattct 589  Q
    |||||| | |||||||| ||||||||||||||||||||          ||||||||||||||||||||||||||| || ||| | ||||||||||||||     
T  14117411 aatcttgactcatttcacttttcaatacaacattaatttttttttttcaattataactctaattaatattactttcacaactttcaattcaatatattca 14117510  T
Q  590 actttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    ||||||||||||||||||||||||||  |||||||||||  |||| |||||||||    
T  14117511 actttacatttatgataaagaagaatacaccaatacttgaaaaaggcactcaaaa 14117565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 549 - 658
Target Start/End: Original strand, 39998171 - 39998280
Alignment:
Q  549 taattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcat 648  Q
    ||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||  | ||||||||  ||||||||| ||||||||    
T  39998171 taattaatactactttcaccactctcaattcaatatattctactttacatttatgataaagaagaatgctcaaatacttgataaagacacttaaaatcat 39998270  T
Q  649 ttctctctct 658  Q
    || |||||||    
T  39998271 ttttctctct 39998280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 499 - 644
Target Start/End: Original strand, 41726479 - 41726624
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||        |||||||||| ||||||||| || ||| || ||||  ||||||||||||||||||||||||    
T  41726479 tcatttcacttttcaatacaatattaattactttttttcaattataactgtaattaatactaatttcacaactcccaattcaatatattctactttacat 41726578  T
Q  599 ttatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    |||||||||||||||||| | |||||||||  |||| |||||||||    
T  41726579 ttatgataaagaagaatgcaacaatacttgaaaaaggcactcaaaa 41726624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 499 - 658
Target Start/End: Complemental strand, 886597 - 886438
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||        ||||||||| |||||||||||||||||||  | ||| ||||| |||||||||||||| |||    
T  886597 tcatttcacttttcaatacaatattaattactttttttcaattataacactaattaatattacttttatcattctcaattcgatatattctactttgcat 886498  T
Q  599 ttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||||||||| ||  ||| |||  || |||| ||||| ||||||| ||||||    
T  886497 ttatgataaagaagaatgcacagatagttgataaggacaatcaaactcatttccctctct 886438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 539 - 650
Target Start/End: Complemental strand, 41759739 - 41759628
Alignment:
Q  539 attataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacac 638  Q
    ||||||||  |||||||||||||||| |||||||  ||||||||||||| ||||||  |||||||||||||||||||| ||||||| ||| ||| |||||    
T  41759739 attataacattaattaatattactttcactactcccaattcaatatattttactttgtatttatgataaagaagaatgcaccaataattgacaaggacac 41759640  T
Q  639 tcaaaatcattt 650  Q
    ||||| ||||||    
T  41759639 tcaaactcattt 41759628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 500 - 658
Target Start/End: Original strand, 2195427 - 2195584
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||||||||||||| |||||||        |||||||||||||||||||| |||||| |  ||||  |||||||||||||||||||| ||||    
T  2195427 catttcacttttcaatacaacaataattacttttttccaattataactctaattaatactactttcatcactcccaattcaatatattctactttgcatt 2195526  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||  ||||||| ||||||||||  | |||||||||||||  |||| |||||||    
T  2195527 tatgataagaaagaatgcaccaatacttaac-aagacactcaaaactatttttctctct 2195584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 538 - 639
Target Start/End: Complemental strand, 8418412 - 8418311
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||| |||||| |  ||||| |||||| |||||||||||||||||||||||||||||| |||| | ||||||||| |||| |||    
T  8418412 aattataactctaattaatactactttcatcactctcaattcagtatattctactttacatttatgataaagaataatgcatcaatacttgacaaaaaca 8418313  T
Q  638 ct 639  Q
    ||    
T  8418312 ct 8418311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 538 - 655
Target Start/End: Complemental strand, 1494356 - 1494241
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||| ||||||||||||||||| ||||||  ||||  ||||||||||||||| ||||||||||||||||||||| | ||||| |||  || | ||    
T  1494356 aattataacactaattaatattactttcactacttctaat--aatatattctactttgcatttatgataaagaagaatgcatcaataattgataagggca 1494259  T
Q  638 ctcaaaatcatttctctc 655  Q
    ||||||||||||| ||||    
T  1494258 ctcaaaatcatttttctc 1494241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 538 - 624
Target Start/End: Complemental strand, 2875196 - 2875110
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    |||||||||||||||||||| |||||| | | |||| |||||||||||||||||||| |||||||||||| |||||||||| |||||    
T  2875196 aattataactctaattaatactactttcattcctctaaattcaatatattctactttgcatttatgataaggaagaatgtatcaata 2875110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 500 - 649
Target Start/End: Complemental strand, 25174733 - 25174584
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| ||||||||| || |||||||||        || |||||| |||||||||||||||||  ||||||| |||||||||||||||||||| ||||    
T  25174733 catttcacttttcaatataatattaattacatttttccaactataacactaattaatattactttccctactctcaattcaatatattctactttgcatt 25174634  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatt 649  Q
    ||| |||||||| |||| ||||||| ||   || | ||||||||||||||    
T  25174633 tataataaagaataatgcaccaatagttaataagggcactcaaaatcatt 25174584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 500 - 658
Target Start/End: Complemental strand, 45421088 - 45420929
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattactttt-actactcttaattcaatatattctactttacat 598  Q
    ||||||| |||||||||||| |||||||||        ||||||||| |||||||||| ||||||| || |||| | |||||||||||| |||||| |||    
T  45421088 catttcacttttcaatacaatattaattacttttttccaattataacactaattaatactacttttcaccactcctgattcaatatattttactttgcat 45420989  T
Q  599 ttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||||||||||  |||| | ||| ||| | ||||||||  ||||| |||||||    
T  45420988 ttatgataaagaagaatgctccaaaagttgacaagggcactcaaacccatttttctctct 45420929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 538 - 616
Target Start/End: Original strand, 2797037 - 2797115
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatg 616  Q
    ||||||||||||||||||||||||||| | |||||  |||||||||||||||||||| ||||||||||||  |||||||    
T  2797037 aattataactctaattaatattactttcattactcccaattcaatatattctactttgcatttatgataagtaagaatg 2797115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 538 - 616
Target Start/End: Complemental strand, 14748816 - 14748738
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatg 616  Q
    ||||||||| |||||||||| |||||| || | ||| |||||||||||||||||||| |||||||||||||||||||||    
T  14748816 aattataacactaattaatactactttcaccattctcaattcaatatattctactttgcatttatgataaagaagaatg 14748738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 540 - 624
Target Start/End: Original strand, 2119715 - 2119799
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    ||||||||||||||||| ||| ||| || |||  ||||||| ||||||| |||||||||||||||||| ||||||||||||||||    
T  2119715 ttataactctaattaatcttattttcacaacttctaattcagtatattccactttacatttatgataatgaagaatgtaccaata 2119799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 542 - 626
Target Start/End: Original strand, 18725910 - 18725994
Alignment:
Q  542 ataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatact 626  Q
    |||||| |||||||||||||||| | ||||||||||| ||||||||||||||||||||||| |||| ||| |||| | |||||||    
T  18725910 ataactttaattaatattactttcattactcttaattaaatatattctactttacatttataataatgaaaaatgcatcaatact 18725994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 540 - 658
Target Start/End: Original strand, 5392048 - 5392166
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| |||||| |  ||||  |||||||||||||| ||||| |||||||||||  | |||||| ||||||||||| ||||  ||||    
T  5392048 ttataactctaattaatactactttcaacactcccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttgacaaaagcact 5392147  T
Q  640 caaaatcatttctctctct 658  Q
     |||| ||||| |||||||    
T  5392148 taaaaccatttttctctct 5392166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 538 - 644
Target Start/End: Original strand, 8618125 - 8618231
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||| ||||||||| || |||||| |||   ||||||||||||| || |||||||||||||||||||| |||| ||||||||||  |||| |||    
T  8618125 aattataactttaattaatactatttttaccacttccaattcaatatattatattttacatttatgataaagaataatgcaccaatacttaacaaaaaca 8618224  T
Q  638 ctcaaaa 644  Q
    || ||||    
T  8618225 cttaaaa 8618231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 569 - 658
Target Start/End: Complemental strand, 5878305 - 5878217
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||| ||||||||||||||||||||||||||||||| ||| |||||| || |||||||| |||||||| | |||| ||||| |||||||    
T  5878305 actctcaattcaatatattctactttacatttatgat-aagtagaatgaactaatacttgacaaagacatttaaaaccatttttctctct 5878217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 549 - 626
Target Start/End: Original strand, 18733393 - 18733470
Alignment:
Q  549 taattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatact 626  Q
    |||||||||||||||| | ||||||||||| ||||||||||||||| ||||||| |||| ||| |||||| |||||||    
T  18733393 taattaatattactttaattactcttaattaaatatattctactttgcatttataataatgaaaaatgtatcaatact 18733470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 634
Target Start/End: Complemental strand, 43844992 - 43844897
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaag 634  Q
    |||||||||||||||||||  |||||| || ||||  |||| | |||||| ||||||||||||||||||||||||| | |||||||||||| |||||    
T  43844992 aattataactctaattaattctactttaacaactcc-aattaattatattttactttacatttatgataaagaagagtataccaatacttgacaaag 43844897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 539 - 650
Target Start/End: Complemental strand, 15559239 - 15559128
Alignment:
Q  539 attataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacac 638  Q
    |||||||||||||||||||  ||||| |  |||| ||||||||||||||||||||| |||||||||||| |   |||  ||||||||||| |||  ||||    
T  15559239 attataactctaattaataccactttcatcactcctaattcaatatattctactttgcatttatgataatggtaaatacaccaatacttgacaagaacac 15559140  T
Q  639 tcaaaatcattt 650  Q
    | ||||||||||    
T  15559139 ttaaaatcattt 15559128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 44790530 - 44790443
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| |||||| || | ||  |||||||||||||| |||||||||||||||||  | |||||| ||||||||||    
T  44790530 ttataactctaattaatactactttcaccattcccaattcaatatattccactttacatttatgatagtggagaatgcaccaatactt 44790443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 538 - 628
Target Start/End: Complemental strand, 7258477 - 7258387
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttg 628  Q
    |||||||||||||||||||| |||||| |  ||||  |||||||||||||||| ||| |||||||||||| ||  |||| |||||||||||    
T  7258477 aattataactctaattaatactactttcatcactcccaattcaatatattctagtttgcatttatgataatgataaatgcaccaatacttg 7258387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 540 - 650
Target Start/End: Complemental strand, 32241532 - 32241422
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    ||||||||||||||||||||||||| || |||   |||||| ||||||| ||||| |||||||||||  |||||||| | ||||||||  |||  |||||    
T  32241532 ttataactctaattaatattactttcacaacttccaattcattatattccactttgcatttatgatagtgaagaatgcatcaatacttaacaagaacact 32241433  T
Q  640 caaaatcattt 650  Q
     ||||||||||    
T  32241432 taaaatcattt 32241422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 540 - 658
Target Start/End: Complemental strand, 38201499 - 38201382
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    ||||||||||||||||||||||||| | |||||  ||||||||||| |||| ||| ||||||||||||| | ||||| || |||| |||   |||||| |    
T  38201499 ttataactctaattaatattactttcattactcccaattcaatatactctaatttgcatttatgataaaaatgaatgcacaaatatttg-ataagacatt 38201401  T
Q  640 caaaatcatttctctctct 658  Q
    |||||| |||| |||||||    
T  38201400 caaaattatttttctctct 38201382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 500 - 650
Target Start/End: Original strand, 45197570 - 45197720
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||||||||||| |||||||||        ||||||| |||||||||||| || ||| |  ||||| |||||||||||||  | ||||||||    
T  45197570 catttcacttttcaatacaatattaattacttttattaaattatagctctaattaatagtaatttcatcactctcaattcaatatatttcattttacatt 45197669  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    ||||| |  |||||||| | ||||||||  |||| ||||| ||||||||||    
T  45197670 tatgacagtgaagaatgcatcaatacttaacaaaaacacttaaaatcattt 45197720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 582 - 635
Target Start/End: Complemental strand, 25266867 - 25266814
Alignment:
Q  582 tatattctactttacatttatgataaagaagaatgtaccaatacttgccaaaga 635  Q
    ||||||||||||||||||||||||||||||||||| |||||||| || ||||||    
T  25266867 tatattctactttacatttatgataaagaagaatgcaccaatacatgacaaaga 25266814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 606
Target Start/End: Complemental strand, 31410715 - 31410650
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    ||||||| ||||||||| |||||| | ||||||||||||||||||||| ||||| |||||||||||    
T  31410715 tataactttaattaatactactttcattactcttaattcaatatattccactttgcatttatgata 31410650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 452 - 528
Target Start/End: Complemental strand, 25267253 - 25267177
Alignment:
Q  452 taataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaatta 528  Q
    ||||||||||||||||| ||||||| || |||||  | |||||| |  |||||||||||||||||||||||||||||    
T  25267253 taataactgagtcatttctaaaaaaatattgtcataggaatcttgacccatttcagttttcaatacaacattaatta 25267177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 499 - 606
Target Start/End: Complemental strand, 4274448 - 4274341
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||  ||||||||||| ||||||||||        | ||||||||||||||||||||| ||| || ||||| |||||||||||||  ||||| |||    
T  4274448 tcatttcgcttttcaatacatcattaattactttttttcatttataactctaattaatattattttcaccactctcaattcaatatatttcactttgcat 4274349  T
Q  599 ttatgata 606  Q
    ||||||||    
T  4274348 ttatgata 4274341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 569 - 624
Target Start/End: Original strand, 23764994 - 23765049
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  23764994 actctcaattcaatatattttactttacatttatgataaagaagagtgcaccaata 23765049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 32967385 - 32967298
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| |||||| |  | ||| |||||||||||||| |||||| ||||||||||  | |||||| ||||||||||    
T  32967385 ttataactctaattaatactactttcatcattctcaattcaatatattccactttaaatttatgatagtggagaatggaccaatactt 32967298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 544 - 627
Target Start/End: Complemental strand, 42558685 - 42558602
Alignment:
Q  544 aactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||| |||||| |  |||||||||||||||||||| ||||| |||||||||||  | |||||  ||||||||||    
T  42558685 aactctaattaatactactttcatcactcttaattcaatatattccactttgcatttatgatagtggagaataaaccaatactt 42558602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 44615473 - 44615386
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||| ||| |  ||||| |||||||||||||||||||| ||||||| |||  | |||||  ||||||||||    
T  44615473 ttataactctaattaatattattttcatcactctcaattcaatatattctactttgcatttataatagtggagaattcaccaatactt 44615386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 556 - 650
Target Start/End: Complemental strand, 325208 - 325114
Alignment:
Q  556 tattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    ||||| |||||  ||||| |||||||||||||| |||||| ||||||||||| |  ||||| ||||||||||| ||||| || |||||| |||||    
T  325208 tattaattttatcactctcaattcaatatattccactttatatttatgataacggtgaatgcaccaatacttgacaaaggcaatcaaaaccattt 325114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 644
Target Start/End: Complemental strand, 10729032 - 10728927
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||| ||||||||||||||| |||||| |  ||||  |||||||||||||| ||||| ||||||||||||  ||||||| || |||||||  | ||||||    
T  10729032 aattgtaactctaattaatactactttaatcactcccaattcaatatattccactttgcatttatgataagaaagaatgcacaaatacttaac-aagaca 10728934  T
Q  638 ctcaaaa 644  Q
    |||||||    
T  10728933 ctcaaaa 10728927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 600
Target Start/End: Complemental strand, 32231910 - 32231768
Alignment:
Q  458 ctgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaata 557  Q
    ||||||||||||||||||| || |||| |   ||  || | |||||||| |||||||||||| |||||||||        ||||||||| ||||||||||    
T  32231910 ctgagtcatttataaaaaaatattgtcccaaaaaaattgactcatttcacttttcaatacaatattaattacttttttccaattataacactaattaata 32231811  T
Q  558 ttacttttactactcttaattcaatatattctactttacattt 600  Q
     |||||| || ||||  ||||||||||||| |||||| |||||    
T  32231810 atactttcaccactcccaattcaatatattttactttgcattt 32231768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 548 - 658
Target Start/End: Original strand, 33743783 - 33743893
Alignment:
Q  548 ctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatca 647  Q
    ||||||||||||||||| |  ||||  |||| |||||||||||||||  |||||||||||||||||||| || |||| |||  ||  |||||||||  ||    
T  33743783 ctaattaatattactttcatcactcacaatttaatatattctactttgtatttatgataaagaagaatgcacaaatagttgataagtacactcaaaccca 33743882  T
Q  648 tttctctctct 658  Q
    ||| |||||||    
T  33743883 tttttctctct 33743893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 624
Target Start/End: Complemental strand, 42412493 - 42412407
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    ||||||| |||||||||||| |||||| |  ||||  |||||||||||||| ||||| |||||||||||| | |||||| |||||||    
T  42412493 aattatagctctaattaatactactttcatcactcccaattcaatatattccactttgcatttatgataatggagaatgcaccaata 42412407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 607
Target Start/End: Complemental strand, 1230472 - 1230403
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||| |||||||||||| ||  |  ||||| |||||||||||||||||||| ||||||||||||    
T  1230472 aattataactttaattaatattatttccatcactctcaattcaatatattctactttgcatttatgataa 1230403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 607
Target Start/End: Original strand, 33826228 - 33826297
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    ||||||||||||||| |||| |||||| |  | ||| ||||||||||||||| |||||||||||||||||    
T  33826228 aattataactctaatcaatactactttcatcattctcaattcaatatattctgctttacatttatgataa 33826297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 627
Target Start/End: Complemental strand, 44226031 - 44225942
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||||| ||| |   ||||  ||| ||||||||||||||| |||||||||| || | ||||| ||||||||||    
T  44226031 aattataactctaattaatattattttcatcgctctctatttaatatattctactttgcatttatgatgaaaatgaatgcaccaatactt 44225942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 5962581 - 5962494
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||| ||| |  ||||  |||||||||||||| ||||| ||||||| |||  | |||||| ||||||||||    
T  5962581 ttataactctaattaatattaatttcatcactcccaattcaatatattccactttgcatttataatagtggagaatgcaccaatactt 5962494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 500 - 615
Target Start/End: Original strand, 37459309 - 37459424
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||| ||||||| |||||||||        ||||||||  |||||| ||| |||||| || ||||  |||| ||||||||| ||||| ||||    
T  37459309 catttcactttttaatacaatattaattacttttttctaattataatactaattgatactactttcaccactcccaatttaatatattcaactttgcatt 37459408  T
Q  600 tatgataaagaagaat 615  Q
    ||||||||||||||||    
T  37459409 tatgataaagaagaat 37459424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 574 - 624
Target Start/End: Complemental strand, 9734241 - 9734191
Alignment:
Q  574 taattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    ||||| |||||||| |||||| ||||||||||||||||||||| |||||||    
T  9734241 taatttaatatattttactttgcatttatgataaagaagaatgcaccaata 9734191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 602
Target Start/End: Original strand, 12653686 - 12653748
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttat 602  Q
    |||||||||| |||||||||||||| |  | ||| |||||||||||||| |||||||||||||    
T  12653686 ttataactctgattaatattactttcatcattctcaattcaatatattccactttacatttat 12653748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 610
Target Start/End: Original strand, 17005945 - 17006014
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaaga 610  Q
    ||||||||||||||||||||   |||| |  ||||  |||||||||||||||||||| |||||||||||||||    
T  17005945 aattataactctaattaata---ctttcatcactcccaattcaatatattctactttgcatttatgataaaga 17006014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 610
Target Start/End: Complemental strand, 17571303 - 17571234
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaaga 610  Q
    ||||||||||||||||||||   |||| |  ||||  |||||||||||||||||||| |||||||||||||||    
T  17571303 aattataactctaattaata---ctttcatcactcccaattcaatatattctactttgcatttatgataaaga 17571234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 628
Target Start/End: Complemental strand, 27868435 - 27868345
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttg 628  Q
    |||||||| | ||||||||| |||||| |  | ||| |||||||||||||||||||| |||||||||||| ||  |||| | |||||||||    
T  27868435 aattataattttaattaatactactttcatcattctcaattcaatatattctactttgcatttatgataatgataaatggatcaatacttg 27868345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 28802766 - 28802832
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||| || ||| |  ||||| |||||||||||||| ||||| |||||||||||    
T  28802766 ttataactctaattaataatattttcatcactctcaattcaatatattccactttgcatttatgata 28802832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 602
Target Start/End: Complemental strand, 33925192 - 33925130
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttat 602  Q
    |||||||||||||||||| |||||| || ||| | |||||||||||||| ||||| |||||||    
T  33925192 ttataactctaattaatactactttcacaactttcaattcaatatattccactttgcatttat 33925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 45425484 - 45425550
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    ||||||||||||||||||||||||| |  | || ||||| ||||||||| ||||| |||||||||||    
T  45425484 ttataactctaattaatattactttcatcattcctaatttaatatattccactttgcatttatgata 45425550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 658
Target Start/End: Complemental strand, 5423263 - 5423154
Alignment:
Q  549 taattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcat 648  Q
    ||||||||| ||||||||  | ||| |||||||||| ||| |||||  ||||||||||| |   |||  |||||| |||| ||| |||||||||||||||    
T  5423263 taattaatactacttttatcattctcaattcaatatcttccactttgtatttatgataatggtaaatacaccaatgcttgacaaggacactcaaaatcat 5423164  T
Q  649 ttctctctct 658  Q
    || |||||||    
T  5423163 ttttctctct 5423154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 624
Target Start/End: Complemental strand, 8394344 - 8394279
Alignment:
Q  559 tacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    |||||| || ||||| ||||||||||||| ||||||  ||||||||||||||| |||| |||||||    
T  8394344 tactttcaccactctcaattcaatatattttactttgtatttatgataaagaataatgcaccaata 8394279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 650
Target Start/End: Original strand, 27571580 - 27571661
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    ||||| |||||||||| ||  ||||||||||||||| || |  ||||| |||| ||||||||||||| ||| ||||||||||    
T  27571580 actctcaattcaatatttttcactttacatttatgaaaatggtgaatgcaccattacttgccaaagatacttaaaatcattt 27571661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 499 - 608
Target Start/End: Complemental strand, 34287228 - 34287119
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| ||||||||||||||||||| ||          |||||| |||||||||||||||||| |  | |  ||||||||||||||| |||||||||    
T  34287228 tcatttcacttttcaatacaacattaatcactttttttcctttataattctaattaatattactttcatcatttctaattcaatatattccactttacat 34287129  T
Q  599 ttatgataaa 608  Q
    ||| ||||||    
T  34287128 ttacgataaa 34287119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 538 - 616
Target Start/End: Complemental strand, 44975859 - 44975779
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaat--atattctactttacatttatgataaagaagaatg 616  Q
    |||||||||||||||||||| |||||| |  || || ||||||||  ||||||||| ||||||||| |||||||| |||||    
T  44975859 aattataactctaattaatactactttcatcacgctcaattcaatacatattctacattacatttacgataaagaggaatg 44975779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 625
Target Start/End: Original strand, 3384546 - 3384618
Alignment:
Q  553 taatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatac 625  Q
    |||||||||||| |  ||| | |||||||||||||| ||||| |||||||||||  ||||||| |||||||||    
T  3384546 taatattactttcatcactttcaattcaatatattcaactttgcatttatgatagtgaagaatataccaatac 3384618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 658
Target Start/End: Complemental strand, 26570210 - 26570142
Alignment:
Q  590 actttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||| |||||||||||| || ||||| | ||||||||| ||||  |||||||||| ||||||||||||    
T  26570210 actttgcatttatgataatgacgaatgcatcaatacttgacaaaatcactcaaaattatttctctctct 26570142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 624
Target Start/End: Original strand, 26677067 - 26677156
Alignment:
Q  539 attataactctaattaatattacttttactactcttaattca----atatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    ||||||||| |||||||||||| ||| |  ||||||||||||    |||||||||||||| |||||||||||| |  ||||| |||||||    
T  26677067 attataactttaattaatattaatttcatcactcttaattcaatttatatattctactttgcatttatgataatggtgaatgcaccaata 26677156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 656
Target Start/End: Original strand, 31132729 - 31132845
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| |||||| || ||| | |||| | ||||||| | ||| |||||||||||  | ||||| |||||||||||  |||   ||||    
T  31132729 ttataactctaattaatactactttcacaactttcaattgattatattccattttgcatttatgatactggagaatataccaatacttaacaagagcact 31132828  T
Q  640 caaaatcatttctctct 656  Q
     |||||||||| |||||    
T  31132829 taaaatcatttttctct 31132845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 628
Target Start/End: Original strand, 32472130 - 32472181
Alignment:
Q  577 ttcaatatattctactttacatttatgataaagaagaatgtaccaatacttg 628  Q
    |||||||||||||||||| |||||||||||| | ||||| ||| ||||||||    
T  32472130 ttcaatatattctacttttcatttatgataatggagaatatactaatacttg 32472181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 658
Target Start/End: Complemental strand, 33191058 - 33190899
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||          ||||||||||||||| || |||||| || |||   |||||||||||||| ||| | |||    
T  33191058 tcatttcacttttcaatacaatattaattacttttttccctttataactctaattagtactactttcacaacttccaattcaatatattccactatgcat 33190959  T
Q  599 ttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||  | |||||| |  |||||||  |||  ||||| |||||||||| |||||||    
T  33190958 ttatgatagtggagaatgcattaatacttaacaagaacacttaaaatcatttttctctct 33190899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 37219872 - 37219785
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||| |||||| |||||| || ||| | |||| ||||||||  |||||| ||||||||||| | |||||| ||| ||||||    
T  37219872 ttataactctagttaataatactttcacaactttcaatttaatatatttcactttatatttatgataagggagaatgcacccatactt 37219785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 39171542 - 39171608
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||| || ||| |  ||||  |||||||||||||| ||||| |||||||||||    
T  39171542 ttataactctaattaatactattttcatcactcacaattcaatatattccactttgcatttatgata 39171608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 607
Target Start/End: Original strand, 29567202 - 29567271
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||| | ||||||||| |||||| |  ||||||||| ||||||||| ||||||  |||||||||||    
T  29567202 aattataaatttaattaatactactttcataactcttaatgcaatatattttactttgtatttatgataa 29567271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 548 - 608
Target Start/End: Complemental strand, 17790170 - 17790110
Alignment:
Q  548 ctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaa 608  Q
    ||||||||||||| ||| || |||   || |||||||||||||||||| ||||||||||||    
T  17790170 ctaattaatattattttcaccacttccaaatcaatatattctactttatatttatgataaa 17790110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 540 - 604
Target Start/End: Original strand, 29615797 - 29615861
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatga 604  Q
    |||||||| ||||||||| |||||| |  | ||  |||||||||||||| |||||||||||||||    
T  29615797 ttataactttaattaatactactttcatcattcccaattcaatatattccactttacatttatga 29615861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 538 - 606
Target Start/End: Original strand, 39416308 - 39416375
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    ||||||||||||||||||||||| |||||  ||| | ||||||| |||||| | ||| |||||||||||    
T  39416308 aattataactctaattaatattagttttatcactttcaattcaa-atattccaatttgcatttatgata 39416375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 9e-44; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 436 - 658
Target Start/End: Complemental strand, 33921681 - 33921459
Alignment:
Q  436 tactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnn 535  Q
    ||||| ||||||||||||||||||||| ||||| ||||||| || |||| | | ||  || |  ||||||| ||| ||| |||| |||||||||          
T  33921681 tactccctccgtcccgtaataactgagccatttttaaaaaaatattgtcccagaaaaattgacccatttcactttccaaaacaatattaattactttttt 33921582  T
Q  536 nnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaaga 635  Q
      |||||||||||||||||||| ||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||| |    
T  33921581 ccaattataactctaattaatactacttttacaactcccaattcaatatattctactttacatttatgataaagaagaatggaccaatacttaacaaaca 33921482  T
Q  636 cactcaaaatcatttctctctct 658  Q
    ||||||||| ||||| |||||||    
T  33921481 cactcaaaaccatttttctctct 33921459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 436 - 658
Target Start/End: Complemental strand, 3166319 - 3166098
Alignment:
Q  436 tactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnn 535  Q
    ||||| |||||| |||||||||||||  ||||| |||||||| | |||| |   |||||| || ||||||| ||||||||||||||||||||||          
T  3166319 tactccctccgttccgtaataactgaaccatttgtaaaaaat-attgtcccaagaatcttgatccatttcaattttcaatacaacattaattactttttt 3166221  T
Q  536 nnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaaga 635  Q
      |||||||||||||||||||| |||||| || | || | |||||||||||||||||||||||||||||||||||| |||  | |||||||||  |||||    
T  3166220 ccaattataactctaattaatactactttcaccaatcctcattcaatatattctactttacatttatgataaagaaaaatacatcaatacttgttaaaga 3166121  T
Q  636 cactcaaaatcatttctctctct 658  Q
    |||||||||  |||| |||||||    
T  3166120 cactcaaaactatttttctctct 3166098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 538 - 644
Target Start/End: Complemental strand, 33018054 - 33017948
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||| |||||| || ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  33018054 aattataactctaattaatactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgacaaagaca 33017955  T
Q  638 ctcaaaa 644  Q
    |||||||    
T  33017954 ctcaaaa 33017948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 508 - 650
Target Start/End: Complemental strand, 3874189 - 3874048
Alignment:
Q  508 ttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    ||||||||||| ||||||||||        ||||||| || |||| ||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||    
T  3874189 ttttcaatacagcattaattacttttttccaattatatctataat-aatattactttcactactcctaattcaatatattcaactttacatttatgataa 3874091  T
Q  608 agaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    |||| |||| ||||||||||| |||||||||||||||||||||    
T  3874090 agaataatgcaccaatacttgacaaagacactcaaaatcattt 3874048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 463 - 627
Target Start/End: Complemental strand, 8232495 - 8232332
Alignment:
Q  463 tcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattact 562  Q
    |||||||||||||| || |||| |   |||||| || ||||||| ||||||||||||||||||||||        |||||||| ||||||||||| ||||    
T  8232495 tcatttataaaaaaatattgtctcaagaatcttgatccatttcacttttcaatacaacattaattacttttttccaattataattctaattaatagtact 8232396  T
Q  563 tttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    || || | ||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  8232395 ttcacaagtctcaattcaatatatt-tactttacatttatgataaagaagaatgcaccaatactt 8232332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 9354553 - 9354430
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaata---tattctactttacatttatgataaagaagaatgtaccaatacttgccaaag 634  Q
    |||||||||||||||||||| |||||| || |||| ||||||||||   ||||||||| ||||||||||||||||||||||| ||||||| ||  |||||    
T  9354553 aattataactctaattaatactactttcacaactcctaattcaatagtatattctactctacatttatgataaagaagaatggaccaatatttaacaaag 9354454  T
Q  635 acactcaaaatcatttctctctct 658  Q
    |||||||||| ||||| |||||||    
T  9354453 acactcaaaaccatttttctctct 9354430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 538 - 657
Target Start/End: Complemental strand, 15371973 - 15371855
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||| |||||||||| |||||| || ||||  |||||||||||||||||||| ||||||||||||||||||||| || |||| |||   ||||||    
T  15371973 aattataacactaattaatactactttcaccactcccaattcaatatattctactttgcatttatgataaagaagaatgcactaatagttg-ataagaca 15371875  T
Q  638 ctcaaaatcatttctctctc 657  Q
    ||||||| ||||| ||||||    
T  15371874 ctcaaaaccatttttctctc 15371855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 538 - 624
Target Start/End: Original strand, 4552906 - 4552992
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    ||||||||| ||||||||||||||||| || ||||  |||| ||||||||||| ||| ||||||||||||||||||||| |||||||    
T  4552906 aattataacactaattaatattactttcaccactcccaatttaatatattctaatttgcatttatgataaagaagaatgcaccaata 4552992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 31265778 - 31265865
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||||||| || |||   |||||||||||||| |||||||||||||||||  | |||||| ||||||||||    
T  31265778 ttataactctaattaatattactttcacaacttccaattcaatatattccactttacatttatgatagtggagaatgcaccaatactt 31265865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 538 - 624
Target Start/End: Complemental strand, 15321335 - 15321249
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    ||||||||| |||||||||| |||||| |  | ||| |||||||||||||||||||| ||||||||||||||||||| | |||||||    
T  15321335 aattataacactaattaatactactttcaacattctcaattcaatatattctactttgcatttatgataaagaagaacgcaccaata 15321249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 501 - 650
Target Start/End: Complemental strand, 34803854 - 34803703
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| |||||||||||| || ||||||        |||||||||| ||||||||| |||||| || ||||| ||||||||||||| || ||| |||||    
T  34803854 atttcacttttcaatacaatatcaattactttttttcaattataactataattaatactactttcacaactctcaattcaatatattttattttgcattt 34803755  T
Q  601 atg--ataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    |||  ||||||| ||||| | ||||| |||  |||||||||||||| |||||    
T  34803754 atgatataaagaggaatgcatcaatagttgataaagacactcaaaaccattt 34803703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 568 - 658
Target Start/End: Complemental strand, 34915893 - 34915803
Alignment:
Q  568 tactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||| ||||||||||||||| ||||| |||||||||||| | |||||| ||||||||||  |  | ||||| ||||||||||||||||||    
T  34915893 tactcataattcaatatattccactttgcatttatgataatggagaatgcaccaatacttaacgtaaacacttaaaatcatttctctctct 34915803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 657
Target Start/End: Complemental strand, 7301188 - 7301071
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||| |||||||||||| |  | | | |||||||||||||| |||||||||||||||||| | |||||| || |||||||  |||| |||||    
T  7301188 ttataactctaactaatattactttcatcattttcaattcaatatattccactttacatttatgataatggagaatgcacaaatacttaacaaacacact 7301089  T
Q  640 caaaatcatttctctctc 657  Q
     ||||  |||| ||||||    
T  7301088 taaaactatttttctctc 7301071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 650
Target Start/End: Original strand, 20027638 - 20027691
Alignment:
Q  597 atttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  20027638 atttatgataaagaagaatgcaccaatacttaacaaagacactcaaaatcattt 20027691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 614
Target Start/End: Complemental strand, 15351493 - 15351417
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaa 614  Q
    ||||| ||| |||||||||| |||||| ||  |||| ||||||||||||||||| || |||||||||||||||||||    
T  15351493 aattacaacactaattaatactactttcaccgctctcaattcaatatattctaccttgcatttatgataaagaagaa 15351417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 650
Target Start/End: Original strand, 20383843 - 20383953
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||||||||||||||| ||||| | ||||   |||||| ||||||||| ||| |||||| ||||| || ||||| ||||||||||| | ||||||    
T  20383843 aattataactctaattaatatcactttaagtacttccaattca-tatattctatttttcatttaagataatgaggaatgcaccaatacttgac-aagaca 20383940  T
Q  638 ctcaaaatcattt 650  Q
    ||||||| |||||    
T  20383941 ctcaaaaccattt 20383953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 501 - 616
Target Start/End: Complemental strand, 2310435 - 2310320
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| |||||||||||| |||||||||        |||||||||  ||||||||| |||||| |  ||||  ||||||||||||| ||| || |||||    
T  2310435 atttcacttttcaatacaatattaattactttttttcaattataacattaattaatactactttcatcactcccaattcaatatattataccttgcattt 2310336  T
Q  601 atgataaagaagaatg 616  Q
    ||||||||||||||||    
T  2310335 atgataaagaagaatg 2310320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 3604708 - 3604621
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||||||| || |||   |||||||||||||| ||||| ||||||  |||| | |||||| ||||||||||    
T  3604708 ttataactctaattaatattactttcacaacttccaattcaatatattccactttgcatttacaataatggagaatgcaccaatactt 3604621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 9755255 - 9755168
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||| |||||||||||| ||| |  | | | |||||||||||||||||| |||||||||||||  | |||||||||||||||||    
T  9755255 ttataactgtaattaatattattttcatcattttcaattcaatatattctactctacatttatgatagtggagaatgtaccaatactt 9755168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 500 - 600
Target Start/End: Original strand, 34441851 - 34441950
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| ||||||||||||||||||||||        |||||||||| ||||||||| |||||| |  |||||||||| ||||||||||| ||||||||    
T  34441851 catttcacttttcaatacaacattaattacttttttc-aattataactttaattaatactactttcatcactcttaatttaatatattctaatttacatt 34441949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 650
Target Start/End: Complemental strand, 14312755 - 14312646
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactc 640  Q
    ||||||||||||||||| ||  || |  ||||| ||||||||| |||  |||||||||||||||||| | |||||| ||||||||||  |||| |||||     
T  14312755 tataactctaattaataatatgttcatcactctcaattcaatacatttcactttacatttatgataatggagaatgcaccaatacttaacaaaaacactt 14312656  T
Q  641 aaaatcattt 650  Q
    |||| |||||    
T  14312655 aaaaccattt 14312646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 658
Target Start/End: Original strand, 15355603 - 15355691
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||| |||||| |||||||||||||  |||||||||||||||||||| ||||||| |||   ||||||||||||| || || |||||||    
T  15355603 actctcaattcattatattctactttggatttatgataaagaagaatgcaccaatagttg-ataagacactcaaaaccaattttctctct 15355691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 627
Target Start/End: Original strand, 28538993 - 28539082
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||  ||||| |  ||| |||||| ||||||||||||||| ||||||| |||| ||||| || || |||||||    
T  28538993 aattataactctaattaataccactttcatcacttttaatttaatatattctactttgcatttataataaggaagattgcactaatactt 28539082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 614
Target Start/End: Original strand, 15325144 - 15325220
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaa 614  Q
    ||||||||  |||||||||| || ||| || ||||| ||| |||||||||||||||| |||||| ||||||||||||    
T  15325144 aattataatactaattaatactagtttcaccactctcaatccaatatattctactttgcatttacgataaagaagaa 15325220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 607
Target Start/End: Complemental strand, 7739622 - 7739559
Alignment:
Q  544 aactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||||| ||||||||  | ||| |||||||||| ||||||||||||||||| ||||    
T  7739622 aactctaattaatactacttttatcattctcaattcaatatcttctactttacatttataataa 7739559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 602
Target Start/End: Complemental strand, 30064057 - 30063995
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttat 602  Q
    ||||||||||||||||||||||||| |  ||||  |||||||||||||| ||||| |||||||    
T  30064057 ttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttat 30063995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 650
Target Start/End: Complemental strand, 14306348 - 14306239
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactc 640  Q
    ||||||||||||||||| ||  || |  ||||| |||| |||| |||  |||||||||||||||||| | |||||| ||||||||||  |||| |||||     
T  14306348 tataactctaattaataatatgttcatcactctcaatttaatacatttcactttacatttatgataatggagaatgcaccaatacttaacaaaaacactt 14306249  T
Q  641 aaaatcattt 650  Q
    |||| |||||    
T  14306248 aaaaccattt 14306239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 4238421 - 4238507
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||| ||||||||| |||||  || ||| | ||||||||| |||  |||||||||||||||||  |||||||| ||||||||||    
T  4238421 ttataactttaattaatactacttc-acaactttcaattcaatagatttcactttacatttatgatagtgaagaatgcaccaatactt 4238507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 600
Target Start/End: Complemental strand, 8569849 - 8569787
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    ||||||| ||||||||||||||||||| || ||||| |||| ||||||||  ||||| |||||    
T  8569849 aattatagctctaattaatattactttcaccactctcaatttaatatatttcactttgcattt 8569787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 644
Target Start/End: Original strand, 34442134 - 34442187
Alignment:
Q  591 ctttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    ||||| |||||||||||||||||||| ||||||||| | ||| |||| ||||||    
T  34442134 ctttatatttatgataaagaagaatgcaccaatactagacaaggacaatcaaaa 34442187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 4e-43; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 453 - 650
Target Start/End: Original strand, 18460400 - 18460597
Alignment:
Q  453 aataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaat 552  Q
    |||||||||||||||| | ||||| || |||| |   |||||| | | |||||  |||||| ||||||||||||||         |||||||||||||||    
T  18460400 aataactgagtcatttgttaaaaaatattgtcccaagaatcttgactaatttctcttttcactacaacattaattatttttttccaattataactctaat 18460499  T
Q  553 taatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||    
T  18460500 taatattacttctacaactctcaattcaatatattctactttacatttatgacaaagaagaatgtaccaatatttgacaaagacactcaaaatcattt 18460597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 490 - 658
Target Start/End: Complemental strand, 1908652 - 1908484
Alignment:
Q  490 aatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattct 589  Q
    |||||| || ||||||| ||||||||||||||||||||||        ||||||||||||||||||||||| ||| || |||   |||||||||||||||    
T  1908652 aatcttgatccatttcaattttcaatacaacattaattactttttttcaattataactctaattaatattattttcaccacttccaattcaatatattct 1908553  T
Q  590 actttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||||||||||| ||||| |||||||    
T  1908552 actttacatttatgataaagaagaatgcactaatacttgcaaaagacactcaaaaccatttttctctct 1908484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 500 - 644
Target Start/End: Complemental strand, 7931644 - 7931500
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| ||||||||||||||||||||||        |||||||||||||||||||| |||||| || ||||| ||||||||||||| |||||||||||    
T  7931644 catttcacttttcaatacaacattaattactttttttcaattataactctaattaatactactttcacaactctcaattcaatatattttactttacatt 7931545  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    ||||||||||||||||| || ||||||||  ||||||||||||||    
T  7931544 tatgataaagaagaatgcactaatacttgaaaaagacactcaaaa 7931500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 500 - 649
Target Start/End: Original strand, 9472381 - 9472530
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| ||||||||||||||||||| ||        |||||||||| ||||||||| |||||| || ||| | |||||||||||||||||| ||||||    
T  9472381 catttcacttttcaatacaacattaatcactttttttcaattataactataattaatactactttcaccactatcaattcaatatattctactatacatt 9472480  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatt 649  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||| ||||    
T  9472481 tatgataaagaagaatgtatcaatacttgacaaagacactctaaaccatt 9472530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 500 - 644
Target Start/End: Original strand, 24356070 - 24356214
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| ||||||||||||||||||||||        |||||||||||||||||||| |||||| || ||||  ||||||| |||||||||||||||||    
T  24356070 catttcacttttcaatacaacattaattactttttttcaattataactctaattaatactactttcacgactcccaattcaacatattctactttacatt 24356169  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    ||||||||||||||||| | |||||||||  |||| |||||||||    
T  24356170 tatgataaagaagaatgcatcaatacttgaaaaaggcactcaaaa 24356214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 499 - 658
Target Start/End: Original strand, 7213433 - 7213592
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||          |||||||||||||||||| |||||| || ||||| |||||||||||||| |||||||||    
T  7213433 tcatttcacttttcaatacaatattaattactttttcccttttataactctaattaatactactttcacaactctcaattcaatatattccactttacat 7213532  T
Q  599 ttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||| ||||||||||||| ||||||| |||  |||| ||||||||||||||| |||||||    
T  7213533 ttataataaagaagaatgcaccaatatttgataaaggcactcaaaatcatttttctctct 7213592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 442 - 650
Target Start/End: Original strand, 28843958 - 28844171
Alignment:
Q  442 ctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnn--aa 539  Q
    |||| ||||||||||| |||||||||| ||||||| || ||||     ||| || || ||||||||||||||||||||||||||||            ||    
T  28843958 ctccctcccgtaataattgagtcatttgtaaaaaaatattgtcctaagaattttgatccatttcagttttcaatacaacattaattttttttttttctaa 28844057  T
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgt---accaatacttgccaaagac 636  Q
    ||||||||||||| |||| |||||| || ||||| ||||||||||||| ||||||||||||||||||||||||||| |   |||||||||||||||||||    
T  28844058 ttataactctaataaataatactttcaccactctcaattcaatatattatactttacatttatgataaagaagaatattacaccaatacttgccaaagac 28844157  T
Q  637 actcaaaatcattt 650  Q
    | ||||||| ||||    
T  28844158 attcaaaattattt 28844171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 540 - 658
Target Start/End: Original strand, 9724879 - 9724995
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| |||||| ||  | |  |||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||  ||||    
T  9724879 ttataactctaattaatactactttcacccccc--aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaaagcact 9724976  T
Q  640 caaaatcatttctctctct 658  Q
    |||||||||||||||||||    
T  9724977 caaaatcatttctctctct 9724995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 501 - 656
Target Start/End: Complemental strand, 37529218 - 37529063
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| ||| |||||||| |||||||||        ||||||||||||||||||||||||||| || |||   |||||||| |||||||||||||||||    
T  37529218 atttcactttccaatacaatattaattactttttttcaattataactctaattaatattactttcaccacttccaattcaatttattctactttacattt 37529119  T
Q  601 atgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctct 656  Q
    ||||||||||| |||  ||||||||||  ||||||||||||||| ||||| |||||    
T  37529118 atgataaagaaaaatagaccaatacttaacaaagacactcaaaaccatttttctct 37529063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 436 - 658
Target Start/End: Complemental strand, 6972756 - 6972529
Alignment:
Q  436 tactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnn 535  Q
    ||||| ||||||||||||||||| ||| |||||   ||||| || |||| | | ||  ||||| ||||||| |||||||||||| |||||||||          
T  6972756 tactccctccgtcccgtaataaccgagccatttgctaaaaaatattgtcccagaaaaatttatccatttcacttttcaatacaatattaattactttttt 6972657  T
Q  536 nn----aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgcca 631  Q
          ||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| || |||| |||  |    
T  6972656 ttcttcaattataacactaattaatattacttttaccactctcaattcaatatattctactttgcatttatgataaagaagaatgcacaaatagttgata 6972557  T
Q  632 aagacactcaaaatca-tttctctctct 658  Q
    | | ||||||||| || |||||||||||    
T  6972556 agggcactcaaaaccattttctctctct 6972529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 538 - 624
Target Start/End: Original strand, 2048289 - 2048375
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    ||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||||||||||| ||||||| |||||||    
T  2048289 aattataactctaattaatattattttcactactctcaattcaatatattctactttgcatttatgataaacaagaatgcaccaata 2048375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 4283129 - 4283009
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||| |||||||||| ||| ||||||||| ||||| |||||||||||||||| ||||||||||||||||||| ||||| |||||||||||  || | ||    
T  4283129 aattacaactctaatttatactacttttaccactctcaattcaatatattctattttacatttatgataaagaggaatgcaccaatacttgataagggca 4283030  T
Q  638 ctcaaaatcatttctctctct 658  Q
     |||||| ||||| |||||||    
T  4283029 ttcaaaaccatttttctctct 4283009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 490 - 650
Target Start/End: Original strand, 43182223 - 43182381
Alignment:
Q  490 aatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattct 589  Q
    |||||| || ||||||| ||||||||||||||||||||||        |||||||||| ||||||||| || ||| || |||   ||||||||||||| |    
T  43182223 aatcttgatccatttcaattttcaatacaacattaattactttttttcaattataactttaattaatactattttcaccacttccaattcaatatattat 43182322  T
Q  590 actttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    |||  |||||||| ||||||||||||| ||||||| ||| |||||||||||||||| ||||    
T  43182323 act--acatttataataaagaagaatgcaccaatatttgacaaagacactcaaaattattt 43182381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 434 - 658
Target Start/End: Original strand, 31348404 - 31348628
Alignment:
Q  434 tatactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnn 533  Q
    ||||||| ||||||||| ||||||||||| |||||  |||||| || ||||   | ||  || |  ||||||| |||||||||||| |||||||||        
T  31348404 tatactccctccgtcccataataactgagccatttgcaaaaaaatattgtcctagaaaaattgacccatttcaattttcaatacaatattaattactttt 31348503  T
Q  534 nnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaa 633  Q
        ||||||||| |||||||||| |||||| || | || ||||||||||||||||||| | ||||||||||||| ||||||| ||||||| |||  ||     
T  31348504 ttccaattataacactaattaatactactttcaccattcctaattcaatatattctactatgcatttatgataaaaaagaatgcaccaatagttgataag 31348603  T
Q  634 gacactcaaaatcatttctctctct 658  Q
    | ||||||||  ||||| |||||||    
T  31348604 ggcactcaaacccatttttctctct 31348628  T

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Target: chr2; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 437 - 658
Target Start/End: Original strand, 13221965 - 13222185
Alignment:
Q  437 actcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnn 536  Q
    |||| ||||||||| |||||||||||||||||  |||||| || |||| || |||   ||   ||||||| |||||||||||| ||||||||            
T  13221965 actccctccgtcccataataactgagtcatttgcaaaaaaatattgtc-ccataaaaattgaccatttcacttttcaatacaatattaattatttttttt 13222063  T
Q  537 naattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagac 636  Q
     ||||||||| ||||||||||||||||| || |||   ||||||||||||| |||||| ||||||||||||||||||||  ||||||| |||  || | |    
T  13222064 caattataacactaattaatattactttcaccacttccaattcaatatattttactttgcatttatgataaagaagaatacaccaatagttgataagggc 13222163  T
Q  637 actcaaaatcatttctctctct 658  Q
    |||||||  ||||| |||||||    
T  13222164 actcaaacccatttttctctct 13222185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 619
Target Start/End: Complemental strand, 39166806 - 39166725
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtac 619  Q
    |||||| ||| ||||| |||||||||| |||||||  ||||||||||||| |||||||||||||||||||| ||||||||||    
T  39166806 aattatgactttaatttatattactttcactactcccaattcaatatattatactttacatttatgataaaaaagaatgtac 39166725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 538 - 643
Target Start/End: Complemental strand, 928646 - 928543
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||| |||||||||| |||||| || ||||| |||  ||||||||||| ||| ||||||||||||||||||||| ||||||| |||  |||| ||    
T  928646 aattataacactaattaatactactttcaccactctcaat--aatatattctattttgcatttatgataaagaagaatgcaccaatagttgataaaggca 928549  T
Q  638 ctcaaa 643  Q
    ||||||    
T  928548 ctcaaa 928543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 538 - 628
Target Start/End: Complemental strand, 14384388 - 14384298
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttg 628  Q
    |||||||| ||||||||||| ||||||    ||||| ||||||||||||| ||||||||||||||||||| || ||||| |||||||||||    
T  14384388 aattataattctaattaatactactttcttcactctcaattcaatatattatactttacatttatgataatgatgaatgcaccaatacttg 14384298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 538 - 628
Target Start/End: Original strand, 19515878 - 19515968
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttg 628  Q
    |||||||||||||||||||| |||||| | ||||   ||||||||||||| |||||| |||||||||||| ||| |||| |||||||||||    
T  19515878 aattataactctaattaatactactttcattacttacaattcaatatattttactttgcatttatgataatgaaaaatgaaccaatacttg 19515968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 538 - 650
Target Start/End: Original strand, 24451781 - 24451891
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||||||||||||||||||||| ||  ||   ||| |||||||||||||  ||||||||||||||||||||||| ||||||| |    |||||||    
T  24451781 aattataactctaattaatattactttcaccccttccaatacaatatattctac--tacatttatgataaagaagaatgaaccaatattcaataaagaca 24451878  T
Q  638 ctcaaaatcattt 650  Q
    ||||||| |||||    
T  24451879 ctcaaaaccattt 24451891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 8550752 - 8550632
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||| ||||||||| |||||| |  |||||||||||||||||||  ||||| |||||||||||| | |||||| || |||||||| |||  |||    
T  8550752 aattataactataattaatactactttcatcactcttaattcaatatattagactttgcatttatgataatggagaatgcacaaatacttgacaagaaca 8550653  T
Q  638 ctcaaaatcatttctctctct 658  Q
    || |||| || || |||||||    
T  8550652 cttaaaaccacttttctctct 8550632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 31592547 - 31592666
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||| |||||||||||| ||| |  ||||| ||||||||||||||||||||  |||||||||||  ||||||| | ||||||||| | ||||||    
T  31592547 aattataactttaattaatattattttcatcactctcaattcaatatattctactttgtatttatgataagaaagaatgcagcaatacttgac-aagaca 31592645  T
Q  638 ctcaaaatcatttctctctct 658  Q
    ||| |||  |||| |||||||    
T  31592646 ctcgaaactatttttctctct 31592666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 3199895 - 3200012
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||| |||||| || ||||  ||||||||||||| |||||| ||||||||||||| ||   || || |||| ||  ||| ||||    
T  3199895 aattataactctaattaatactactttcaccactcccaattcaatatattatactttgcatttatgataaaaaa---tgcacaaatagttaacaatgaca 3199991  T
Q  638 ctcaaaatcatttctctctct 658  Q
    ||||||| ||||| |||||||    
T  3199992 ctcaaaaccatttttctctct 3200012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 538 - 616
Target Start/End: Complemental strand, 43427196 - 43427118
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatg 616  Q
    ||||||||| |||||||||| |||||| |  ||||  |||||||||||||||| ||| |||||||||||||||||||||    
T  43427196 aattataacactaattaatactactttcatcactcccaattcaatatattctattttgcatttatgataaagaagaatg 43427118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 565 - 650
Target Start/End: Original strand, 314451 - 314536
Alignment:
Q  565 tactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    ||||||| | |||||||||||||||||||| ||||||||||||||||||||| | ||||| |||  || | ||||||||| |||||    
T  314451 tactactttcaattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttgataagggcactcaaaaccattt 314536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 597
Target Start/End: Original strand, 33880157 - 33880214
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttaca 597  Q
    ||||||||||||||||||||||||| || ||||  |||||||||||||||||||||||    
T  33880157 ttataactctaattaatattactttcaccactcccaattcaatatattctactttaca 33880214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 538 - 627
Target Start/End: Original strand, 39095628 - 39095717
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||| |||||||||||||||| |  |||   |||||||||||||| ||||| |||||||||||| | |||||||| ||||||||    
T  39095628 aattataactttaattaatattactttcatcactgacaattcaatatattccactttgcatttatgataatggagaatgtatcaatactt 39095717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 44424373 - 44424253
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||| |||||| |  | ||| |||||||||||||| ||||| ||||||||||||  || |||| | ||||||||| | ||||||    
T  44424373 aattataactctaattaatactactttcatcattctcaattcaatatattcaactttgcatttatgataataaaaaatgcatcaatacttgac-aagaca 44424275  T
Q  638 ctcaaaatca-tttctctctct 658  Q
     |||||| || |||||||||||    
T  44424274 ttcaaaaccattttctctctct 44424253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 650
Target Start/End: Original strand, 4794570 - 4794682
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||| |||||| |  ||| | |||||||||||||| ||||| ||||||||||||  || |||| | ||||| ||| |||  |||    
T  4794570 aattataactctaattaatactactttcatcactttcaattcaatatattccactttgcatttatgataataaaaaatgcatcaatatttgacaagaaca 4794669  T
Q  638 ctcaaaatcattt 650  Q
    |||||||| ||||    
T  4794670 ctcaaaattattt 4794682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 18181323 - 18181203
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||| |||||| | || ||  ||||||| |||||||||||| |||||||||||  | |||||| |||||||| |  ||||  ||    
T  18181323 aattataactctaattaatactactttcattattcccaattcaaaatattctactttgcatttatgatagtggagaatgcaccaatacataacaaaagca 18181224  T
Q  638 ctcaaaatcatttctctctct 658  Q
    || |||| ||||| |||||||    
T  18181223 cttaaaaccatttttctctct 18181203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 586 - 658
Target Start/End: Complemental strand, 38280258 - 38280186
Alignment:
Q  586 ttctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||||||||||||||||||||||| ||||||| ||   |||| ||||||||| ||||| |||||||    
T  38280258 ttctactttacatttatgataaagaagaatgcaccaatatttaaaaaaggcactcaaaaccatttttctctct 38280186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 500 - 607
Target Start/End: Complemental strand, 10069733 - 10069626
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||||||| ||| |||||||||        ||| |||||||||||||||| |||||| |  ||||| |||||||||||||| ||||| ||||    
T  10069733 catttcacttttcaatgcaatattaattacttttttacaatgataactctaattaataatactttcatcactctcaattcaatatattcgactttgcatt 10069634  T
Q  600 tatgataa 607  Q
    ||||||||    
T  10069633 tatgataa 10069626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 508 - 658
Target Start/End: Original strand, 25604328 - 25604476
Alignment:
Q  508 ttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||| |||||||||||||        || ||||| ||||||||||||||  |  | |||||  |||||||||||||||| ||| ||||||||||||    
T  25604328 ttttcaatccaacattaattacttttttccaactataattctaattaatattatctacattactcccaattcaatatattctaatttgcatttatgataa 25604427  T
Q  608 agaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
      ||||||| |||||||||| |  |||||||||||||  |||| |||||||    
T  25604428 gaaagaatgcaccaatacttac--aagacactcaaaactatttttctctct 25604476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 28108483 - 28108396
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| |||||| |  | ||| |||||||||||||| ||||||||| |||||||  | |||||| ||||||||||    
T  28108483 ttataactctaattaatactactttcatcattctcaattcaatatattccactttacatgtatgatagtggagaatgcaccaatactt 28108396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 442 - 594
Target Start/End: Complemental strand, 38282631 - 38282477
Alignment:
Q  442 ctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaa-- 539  Q
    ||||||||| ||||||||||  ||||||||||||| || |||| |   |||||| |||||| ||| |||| ||||||||||||||||         ||      
T  38282631 ctccgtcccataataactgaaccatttataaaaaaatattgtcccaagaatcttgattcatctcactttttaatacaacattaattatttttttacaatt 38282532  T
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctacttt 594  Q
    |||||| |||||||||||||||||| || ||||  |||| |||||||||||||||    
T  38282531 ttataattctaattaatattactttcaccactcccaatttaatatattctacttt 38282477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 499 - 650
Target Start/End: Original strand, 41436037 - 41436188
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||          |||||||||||||||||| |||||| |  | ||| |||||||||||||| ||||| |||    
T  41436037 tcatttcacttttcaatacaatattaattactttttcccttttataactctaattaatactactttcatcattctcaattcaatatattccactttgcat 41436136  T
Q  599 ttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    ||||||||  |||||||  | ||||||||  |||| ||||| ||||| ||||    
T  41436137 ttatgatagtgaagaatacatcaatacttaacaaaaacacttaaaattattt 41436188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 550 - 616
Target Start/End: Original strand, 2427369 - 2427435
Alignment:
Q  550 aattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatg 616  Q
    |||||||| |||||| || ||||  |||||||||||||||||||| ||||||||| |||||||||||    
T  2427369 aattaatactactttcaccactcccaattcaatatattctactttgcatttatgacaaagaagaatg 2427435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 600
Target Start/End: Original strand, 3487391 - 3487453
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| |||||||||||||||||||| |  ||||| |||||||||||||||||||| |||||    
T  3487391 aattattactctaattaatattactttcatcactctcaattcaatatattctactttgcattt 3487453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 656
Target Start/End: Complemental strand, 6213960 - 6213842
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||| ||||| ||||||||| |||||| |  |||||||||| ||||||||||||||| |||||||||||| |   |||| | ||||||||| | |  |||    
T  6213960 aattttaactttaattaatactactttcatcactcttaattgaatatattctactttgcatttatgataatggtaaatgaagcaatacttgacgagaaca 6213861  T
Q  638 ctcaaaatcatttctctct 656  Q
    || |||||||||| |||||    
T  6213860 cttaaaatcatttttctct 6213842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 624
Target Start/End: Complemental strand, 6723969 - 6723884
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    ||||||||||||||||||||| ||||| |  ||||  ||||||||| ||||||||||| ||||||||||| || ||||| |||||||    
T  6723969 aattataactctaattaatataactttcatcactcc-aattcaataaattctactttatatttatgataatgaggaatgcaccaata 6723884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 593 - 650
Target Start/End: Original strand, 14890369 - 14890426
Alignment:
Q  593 ttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    |||||||||||||||||||||||| || ||||||||  |||||||||||||| |||||    
T  14890369 ttacatttatgataaagaagaatgcactaatacttgataaagacactcaaaaccattt 14890426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 734121 - 734002
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||||||||| ||||||||||| |  ||||  || |||||||||| |||| ||||||||||||||    ||||| ||||||| ||| |||| | |    
T  734121 aattataactctaat-aatattactttcatcactcccaactcaatatattttactatacatttatgataatagtgaatgcaccaatatttgacaaaaata 734023  T
Q  638 ctcaaaatcatttctctctct 658  Q
     |||||||||||| |||||||    
T  734022 ttcaaaatcatttttctctct 734002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 606
Target Start/End: Complemental strand, 11726832 - 11726764
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||| | ||||||||| |||||| |  |||||||||||||||||||||||||| || ||||||||    
T  11726832 aattataattttaattaatactactttcatcactcttaattcaatatattctactttgcaattatgata 11726764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 644
Target Start/End: Original strand, 23684958 - 23685062
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| |||||| |  ||||| |||||||||||||  ||||| |||||||||||  | |||||| || |||||||  |||| |||||    
T  23684958 ttataactctaattaatactactttcatcactctcaattcaatatatttcactttgcatttatgatagtggagaatgcactaatacttaacaaaaacact 23685057  T
Q  640 caaaa 644  Q
     ||||    
T  23685058 taaaa 23685062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 538 - 605
Target Start/End: Complemental strand, 6685773 - 6685706
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgat 605  Q
    |||||||| |||||||||||  ||||| || |||   |||||||||||||||||||||||||||||||    
T  6685773 aattataattctaattaatacaactttcaccacttccaattcaatatattctactttacatttatgat 6685706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 28301433 - 28301520
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| |||||| |  ||||| |||||||||||||  ||||| |||||||||||  | |||||  ||||||||||    
T  28301433 ttataactctaattaatactactttcatcactctcaattcaatatatttcactttgcatttatgatagtggagaatagaccaatactt 28301520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 575 - 658
Target Start/End: Original strand, 36748182 - 36748265
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||||| ||||||| ||||||||||||||| || | |||||||||||  ||||  ||||||||  |||| |||||||    
T  36748182 aattcaatatattttactttaaatttatgataaagaataacgcaccaatacttgaaaaaggaactcaaaactatttttctctct 36748265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 37247992 - 37247905
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||||||| |  || || |||||||||||||  ||||| |||||||||||  | |||||  ||||||||||    
T  37247992 ttataactctaattaatattactttcatcacactcaattcaatatatttcactttgcatttatgatagtggagaatagaccaatactt 37247905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 44534591 - 44534504
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| || ||| ||  ||   |||||||||||||| ||||| |||||||||||  | |||||||||||||||||    
T  44534591 ttataactctaattaatactaatttcacagcttccaattcaatatattccactttgcatttatgatagtggagaatgtaccaatactt 44534504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 625
Target Start/End: Complemental strand, 13375298 - 13375212
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattct-actttacatttatgataaagaagaatgtaccaatac 625  Q
    ||||||||||||||||||||| ||| |  | ||| ||||||||||||| | |||||||||||||||||  | |||||| ||||||||    
T  13375298 ttataactctaattaatattattttcatcattctcaattcaatatattttcactttacatttatgatagtggagaatgcaccaatac 13375212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 538 - 624
Target Start/End: Original strand, 26273756 - 26273842
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    |||||||| | ||||||||| |||||| |  ||||  |||||||||||||||||||| |||||||||||| ||  |||||| |||||    
T  26273756 aattataaatttaattaatactactttcatcactcccaattcaatatattctactttgcatttatgataatgataaatgtatcaata 26273842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 569 - 658
Target Start/End: Original strand, 40710605 - 40710693
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||| |||||||||||| ||||||| ||| |||||||| |||||||| || |||| ||| |||| ||||||||||  |||| |||||||    
T  40710605 actctcaattcaatatatgctactttgcatgtatgataaggaagaatgcacgaatatttgacaaa-acactcaaaactatttttctctct 40710693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 538 - 607
Target Start/End: Original strand, 44024715 - 44024784
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||| ||||||||| || ||| |  | |||||| ||||||||||||||||| ||||||||||||    
T  44024715 aattataactataattaatactattttcatcattcttaactcaatatattctactttgcatttatgataa 44024784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 547 - 607
Target Start/End: Complemental strand, 29938015 - 29937955
Alignment:
Q  547 tctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    ||||||||||||||||||||  | ||| ||||||||||||| ||||||  |||||||||||    
T  29938015 tctaattaatattacttttatcattctcaattcaatatattttactttgtatttatgataa 29937955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 539 - 650
Target Start/End: Complemental strand, 38873029 - 38872920
Alignment:
Q  539 attataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacac 638  Q
    |||||||||||||   ||| |||||| || ||||  |||||||||||||  |||||| |||||||||||||| ||||| | ||||| |||  || |||||    
T  38873029 attataactctaaccgatactactttcaccactcccaattcaatatatt--actttatatttatgataaagaggaatgcatcaatagttgataaggacac 38872932  T
Q  639 tcaaaatcattt 650  Q
    |||||| |||||    
T  38872931 tcaaaaccattt 38872920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 650
Target Start/End: Original strand, 39807242 - 39807322
Alignment:
Q  575 aattcaatatattctactttacatt-----tatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    ||||||||||||||||| |||||||     ||| ||||||||||||| ||||||||||  ||||| ||||||||| |||||    
T  39807242 aattcaatatattctacattacattatatttattataaagaagaatgcaccaatacttcacaaaggcactcaaaaccattt 39807322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 604
Target Start/End: Complemental strand, 43077834 - 43077770
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatga 604  Q
    ||||||||||||||||||||||||| |  | | | |||||||||||||  |||||||||||||||    
T  43077834 ttataactctaattaatattactttcatcattttcaattcaatatatttcactttacatttatga 43077770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 543 - 658
Target Start/End: Original strand, 3100402 - 3100517
Alignment:
Q  543 taactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaa 642  Q
    ||||||||||||||| |||||| || |||   |||| ||||||||| ||||| |||||||||||  | |||||| | ||||||||  |||   |||| ||    
T  3100402 taactctaattaatactactttcacaacttccaatttaatatattccactttgcatttatgatagtggagaatgcagcaatacttaacaagatcacttaa 3100501  T
Q  643 aatcatttctctctct 658  Q
    |||||||| |||||||    
T  3100502 aatcatttttctctct 3100517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 10818620 - 10818707
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||| ||||| |  |||| |||||||||| |||  ||||| |||||||||||    |||||| ||||||||||    
T  10818620 ttataactctaattaatatcactttcatcactcctaattcaatacatttcactttgcatttatgatactagagaatgcaccaatactt 10818707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 602
Target Start/End: Complemental strand, 15859491 - 15859388
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||          |||||||||||||||| |||||||| || |||  ||||||||||||||  ||||| |||    
T  15859491 tcatttcacttttcaatacaatattaattacttttttccctttataactctaattaacattactttcacaacttctaattcaatatatttcactttgcat 15859392  T
Q  599 ttat 602  Q
    ||||    
T  15859391 ttat 15859388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 24775916 - 24775829
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||| ||||||| |||||| |  | | |||||||||||||||  |||||||||||||||||  | |||||  ||||||||||    
T  24775916 ttataactctgattaatactactttcatcatttttaattcaatatatttcactttacatttatgatagtggagaatacaccaatactt 24775829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 28526963 - 28527050
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||| |||||||||||||||| || |||   ||||||||||| || ||||||||| |||| ||  |||||||| || |||||||    
T  28526963 ttataactataattaatattactttcacaacttccaattcaatatagtccactttacatatatggtagtgaagaatgcacgaatactt 28527050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 606
Target Start/End: Complemental strand, 31546167 - 31546060
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||| ||||||| |||||||||        ||||||||||||||| |||| |||||| |  |||||||| | ||||||||| ||||| |||    
T  31546167 tcatttcacttttaaatacaatattaattactttttttcaattataactctaatcaatactactttcatcactcttaactaaatatattccactttgcat 31546068  T
Q  599 ttatgata 606  Q
    || |||||    
T  31546067 ttgtgata 31546060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 5212066 - 5212000
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||| | ||||||||| |||||| || ||| | |||||||||||||| ||||| |||||||||||    
T  5212066 ttataaatttaattaatactactttcacaactttcaattcaatatattccactttgcatttatgata 5212000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 658
Target Start/End: Original strand, 8031740 - 8031858
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||| ||||||||| ||||||||  | ||  |||||||||||||  ||||| |||||||||||| | |||||  | ||||||||  |||  ||||     
T  8031740 ttataactttaattaatactacttttatcattcacaattcaatatatttaactttgcatttatgataatggagaatacatcaatacttaacaagaacaca 8031839  T
Q  640 caaaatcatttctctctct 658  Q
     |||||||||| |||||||    
T  8031840 taaaatcatttttctctct 8031858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 604
Target Start/End: Complemental strand, 16865044 - 16864978
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatga 604  Q
    ||||||||||||||||||||| ||||| |  | ||  |||||||||||||  |||||||||||||||    
T  16865044 aattataactctaattaatatcactttcatcattcacaattcaatatatttcactttacatttatga 16864978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 30757676 - 30757610
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||| |||||| |  | ||  |||||||||||||| | |||||||||||||||    
T  30757676 ttataactctaattaatactactttcatcattcccaattcaatatattccaatttacatttatgata 30757610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 588
Target Start/End: Original strand, 44736716 - 44736766
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattc 588  Q
    |||||||||||||||||||| ||||||||  |||||  |||||||||||||    
T  44736716 aattataactctaattaatactacttttatcactctcgattcaatatattc 44736766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 607
Target Start/End: Original strand, 2756671 - 2756740
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||||||||||| || ||  |  |||   |||| ||||||||||||||||||||||||||||    
T  2756671 aattataactctaattaatactatttacatcacttccaatttaatatattctactttacatttatgataa 2756740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 607
Target Start/End: Complemental strand, 7420987 - 7420918
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||| |||||||||||| |||   ||||||  ||| |||||||| |||||| ||||||||||||    
T  7420987 aattataactttaattaatattaatttcgttactctctattaaatatattttacttttcatttatgataa 7420918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 577 - 658
Target Start/End: Original strand, 33755293 - 33755374
Alignment:
Q  577 ttcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||| | ||| ||||||||||| | ||||||  ||||||||||  |||  ||||| |||||||||| |||||||    
T  33755293 ttcaatatattccattttgcatttatgatagaaaagaatagaccaatacttaacaataacacttaaaatcatttttctctct 33755374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 542 - 606
Target Start/End: Complemental strand, 435184 - 435120
Alignment:
Q  542 ataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||| ||||||||| |||||| |  | ||| |||||||||||||  |||||||||||||||||    
T  435184 ataactttaattaatactactttcatcattctcaattcaatatatttcactttacatttatgata 435120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 538 - 594
Target Start/End: Original strand, 6075495 - 6075551
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctacttt 594  Q
    |||||||||||||||||||| |||||| |  ||||  |||| |||||||||||||||    
T  6075495 aattataactctaattaatactactttcatcactcccaatttaatatattctacttt 6075551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 586 - 650
Target Start/End: Complemental strand, 12950026 - 12949963
Alignment:
Q  586 ttctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    ||||||||| ||||||||||||| | ||||  ||||||||||| | |||||||||||||| ||||    
T  12950026 ttctactttgcatttatgataaaaaggaattcaccaatacttgac-aagacactcaaaattattt 12949963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 538 - 605
Target Start/End: Complemental strand, 33602339 - 33602269
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaa---tatattctactttacatttatgat 605  Q
    ||||||||||||||||||| ||||||| |  ||||| |||||||   ||||||| ||||| ||||||||||    
T  33602339 aattataactctaattaatgttactttcatcactctcaattcaatattatattccactttgcatttatgat 33602269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 575 - 607
Target Start/End: Original strand, 43056409 - 43056441
Alignment:
Q  575 aattcaatatattctactttacatttatgataa 607  Q
    ||||||||||||| |||||||||||||||||||    
T  43056409 aattcaatatattatactttacatttatgataa 43056441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 1e-42; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 490 - 658
Target Start/End: Original strand, 2849204 - 2849372
Alignment:
Q  490 aatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattct 589  Q
    |||||| || ||||||| ||||||||||||||||||||||        |||||||| ||||||||||| |||||| || ||||| |||||||||||||||    
T  2849204 aatcttgatccatttcacttttcaatacaacattaattactttttttcaattataattctaattaatactactttcaccactctcaattcaatatattct 2849303  T
Q  590 actttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||  |||| |||||||    
T  2849304 actttacatttatgataaagaagaatgcaccaatacttgacaaagacacgcaaaactatttttctctct 2849372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 436 - 644
Target Start/End: Original strand, 18731337 - 18731542
Alignment:
Q  436 tactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnn 535  Q
    ||||| ||||||||| | ||||||||||| ||| ||||||| || |||| | |||||||| || ||||||||||| |||||||||||||||| |          
T  18731337 tactccctccgtcccatgataactgagtcgtttgtaaaaaaatattgtcccagtaatcttgatccatttcagtttccaatacaacattaattgctttttt 18731436  T
Q  536 nnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaaga 635  Q
      ||||||||||||||||||||   |||| || |||   |||||||||||||||||||||||||||||||||||||||||  | |||||||||  |||||    
T  18731437 ccaattataactctaattaata---ctttcaccacttccaattcaatatattctactttacatttatgataaagaagaattcatcaatacttgataaaga 18731533  T
Q  636 cactcaaaa 644  Q
    |||||||||    
T  18731534 cactcaaaa 18731542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 500 - 654
Target Start/End: Complemental strand, 27338020 - 27337867
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||||||||||||||||||||         |||||||||| ||||||||||||||||||| ||||  ||||||||||||| |||||||||||    
T  27338020 catttcacttttcaatacaacattaatta-ttttttccaattataactttaattaatattacttttaccactcccaattcaatatattatactttacatt 27337922  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctct 654  Q
    |||||||||||| |||| ||||||||||| |||||||||||||||  ||||||||    
T  27337921 tatgataaagaataatgcaccaatacttgacaaagacactcaaaactatttctct 27337867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 32775980 - 32776100
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||| ||||| |||||| || ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||| ||    
T  32775980 aattataactctaaataatactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaaggca 32776079  T
Q  638 ctcaaaatcatttctctctct 658  Q
    ||||||| ||||| |||||||    
T  32776080 ctcaaaaccatttttctctct 32776100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 435 - 611
Target Start/End: Complemental strand, 5068511 - 5068335
Alignment:
Q  435 atactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnn 534  Q
    |||||| || |||||| |||||| |||||||||| ||||||  || |||| |   ||| || | |||||||| |||| ||||||| | |||||||         
T  5068511 atactcccttcgtcccataataagtgagtcatttgtaaaaatatattgtcccaagaatattgactcatttcactttttaatacaatactaattacttttt 5068412  T
Q  535 nnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaa 611  Q
       ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  5068411 tccaattataactctaattaatattactttcaccactcttaattcaatatattctactttacatttatgataaagaa 5068335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 500 - 658
Target Start/End: Complemental strand, 30659628 - 30659470
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| ||||||||||||||||||||||        |||||||||||||||||||| |||||| || |||   ||||||||||||||||||||| |||    
T  30659628 catttcacttttcaatacaacattaattacttttttccaattataactctaattaatactactttcaccacttcaaattcaatatattctactttatatt 30659529  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||||||| | || |||| ||| ||||| |||||||||  |||| |||||||    
T  30659528 tatgataaagaagaacgcacaaatatttgacaaaggcactcaaaactatttttctctct 30659470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 500 - 658
Target Start/End: Original strand, 37264272 - 37264430
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||||||||||| |||||||||        |||||||||||||||||||| |||||| || ||||  |||||||||||||||||||| ||||    
T  37264272 catttcacttttcaatacaatattaattactttttcctaattataactctaattaatactactttcaccactcccaattcaatatattctactttgcatt 37264371  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||  |||| | ||||||||| ||| | ||||||||| ||||| |||||||    
T  37264372 tatgataaagagcaatgcatcaatacttgacaagggcactcaaaaccatttttctctct 37264430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 443 - 650
Target Start/End: Original strand, 36070003 - 36070214
Alignment:
Q  443 tccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagtttt-caatacaacattaattacnnnnnnnn---a 538  Q
    ||||| ||||||||||||||  |||| ||||||| || |||||| | || ||| || |||||||||||| | ||||||||||||||||           |    
T  36070003 tccgttccgtaataactgagctatttgtaaaaaaatattgtcacaggaaccttgatccatttcagtttttccatacaacattaattactttttttcttca 36070102  T
Q  539 attataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacac 638  Q
    |||||| |||||||||||| |||||| |  ||||| |||||| ||||||||||||||| |||||||||||||| |||| ||||||| ||| |||||||||    
T  36070103 attatagctctaattaatactactttcatcactctcaattcagtatattctactttacgtttatgataaagaataatgcaccaatatttgacaaagacac 36070202  T
Q  639 tcaaaatcattt 650  Q
    |||||| |||||    
T  36070203 tcaaaaccattt 36070214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 538 - 650
Target Start/End: Complemental strand, 10355845 - 10355733
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||||||  |||| ||||||| |||  || ||||    
T  10355845 aattataactctaattaatattacttttaccattctcaattcaatatattctactttgcatttatgataaagagaaatgcaccaatagttgataaggaca 10355746  T
Q  638 ctcaaaatcattt 650  Q
    ||||||| |||||    
T  10355745 ctcaaaaccattt 10355733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 24288420 - 24288540
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||||||| || ||  || | |||||||||||||||||||||||||||||||||||||||||| || ||||||||  |||| ||    
T  24288420 aattataactctaattaatattacattcacagctttcaattcaatatattctactttacatttatgataaagaagaatgcacaaatacttgaaaaaggca 24288519  T
Q  638 ctcaaaatcatttctctctct 658  Q
    |||||||  |||| |||||||    
T  24288520 ctcaaaactatttatctctct 24288540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 34064212 - 34064331
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||||||||||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||  ||||||| ||||||||||  | ||||||    
T  34064212 aattataactctaattaatattactttcatcactctcaattcaatatattctactttacatttatgataagaaagaatgcaccaatacttaac-aagaca 34064310  T
Q  638 ctcaaaatcatttctctctct 658  Q
    |||||||  |||| |||||||    
T  34064311 ctcaaaactatttttctctct 34064331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 500 - 644
Target Start/End: Complemental strand, 39343819 - 39343675
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||||||||||| |||||||||        |||||||||||||||||||| || ||| || ||||  |||||||||||||||||||||||||    
T  39343819 catttcacttttcaatacaatattaattaccctttttcaattataactctaattaatactattttcaccactccaaattcaatatattctactttacatt 39343720  T
Q  600 tatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    ||||||||||||||||  || |||||||| ||||  |||||||||    
T  39343719 tatgataaagaagaatacacaaatacttgacaaatgcactcaaaa 39343675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 509 - 644
Target Start/End: Original strand, 43007862 - 43007997
Alignment:
Q  509 tttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaa 608  Q
    ||||||||||| |||||||||        ||| ||||||||||||||||||| ||| || ||||| |||||||||||||||| |||| ||||||||||||    
T  43007862 tttcaatacaatattaattacttctttccaataataactctaattaatattattttcaccactctcaattcaatatattctaatttaaatttatgataaa 43007961  T
Q  609 gaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    ||| |||| || |||||||| |||||||||||||||    
T  43007962 gaaaaatgcacaaatacttgacaaagacactcaaaa 43007997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 38589731 - 38589851
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||| |||||||||| |||||| || ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||  || | ||    
T  38589731 aattataacactaattaatactactttcaccactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatagttgataagggca 38589830  T
Q  638 ctcaaaatcatttctctctct 658  Q
     |||||| ||||| |||||||    
T  38589831 ttcaaaaccatttttctctct 38589851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 433 - 627
Target Start/End: Complemental strand, 37496612 - 37496418
Alignment:
Q  433 ttatactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnn 532  Q
    |||||||| ||||||||| |||||||||||||||||  |||||| || | || |   ||  || |  ||||||| ||||||| ||||||||||||||       
T  37496612 ttatactccctccgtcccataataactgagtcatttgcaaaaaaatattatcccaaaaaaattgacccatttcacttttcaacacaacattaattacttt 37496513  T
Q  533 nnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
         |||||||||| ||||||||| |||||| |  ||||| |||||||||||||||||||||||||||||||||  ||||||| || |||||||    
T  37496512 tttccaattataactttaattaatactactttcatcactctcaattcaatatattctactttacatttatgataagaaagaatgcacaaatactt 37496418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 443 - 656
Target Start/End: Complemental strand, 3668082 - 3667870
Alignment:
Q  443 tccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaatta 542  Q
    ||||| |||||||||||||||||||| ||||||| || ||||     ||  || |  ||||||| |||||||||||||| |||||||        || ||    
T  3668082 tccgttccgtaataactgagtcatttgtaaaaaaatattgtcctaaaaaaattgacccatttcacttttcaatacaacaataattacttttttccaaata 3667983  T
Q  543 taactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaa 642  Q
    ||| |||||||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||  || |||| || ||||||||   |||||||||||    
T  3667982 taattctaattaatattactttcatcactctcaattcaatatattctactttacatttatgataagaaataatgcactaatacttg-ataagacactcaa 3667884  T
Q  643 aatcatttctctct 656  Q
    ||| |||| |||||    
T  3667883 aattatttttctct 3667870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 553 - 658
Target Start/End: Complemental strand, 45218253 - 45218148
Alignment:
Q  553 taatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttct 652  Q
    ||||| |||||| || ||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||| |||||||||  |||| |    
T  45218253 taatactactttcacaactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgaaaaaggcactcaaaactattttt 45218154  T
Q  653 ctctct 658  Q
    ||||||    
T  45218153 ctctct 45218148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 578 - 658
Target Start/End: Complemental strand, 23111159 - 23111079
Alignment:
Q  578 tcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||  ||||||| |||||||||||| |||||||    
T  23111159 tcaatatattctactttacatttatgataaagaagaatgcaccaatagttgataaagacattcaaaatcatttttctctct 23111079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 497 - 607
Target Start/End: Original strand, 28333127 - 28333237
Alignment:
Q  497 attcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttac 596  Q
    |||||||||| |||||||||||||| |||||||        || |||||||||||||||||||||||| |  ||||  ||||||||||||||||||||||    
T  28333127 attcatttcacttttcaatacaacaataattacttttttccaaatataactctaattaatattactttcatcactcccaattcaatatattctactttac 28333226  T
Q  597 atttatgataa 607  Q
    |||||||||||    
T  28333227 atttatgataa 28333237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 501 - 658
Target Start/End: Original strand, 30462620 - 30462777
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| |||||||||||||||||||||         |||||||||||||||||||| || ||| |  ||||| ||||||||||||| || |||||||||    
T  30462620 atttcaattttcaatacaacattaattattttttttcaattataactctaattaatactaatttcatcactctcaattcaatatattatattttacattt 30462719  T
Q  601 atgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||| || |||| |||||||||   ||||||||||| |||  || |||||||||    
T  30462720 atgataaaaaataatgcaccaatactaatcaaagacactctaaacaatctctctctct 30462777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 32972128 - 32972008
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||| |||||||||| |||||| || ||||  |||||||||||||||||||| ||||||||| ||| ||||||| ||||||| |||  || | ||    
T  32972128 aattataacactaattaataatactttcaccactcacaattcaatatattctactttgcatttatgacaaaaaagaatgcaccaatagttgataagggca 32972029  T
Q  638 ctcaaaatcatttctctctct 658  Q
    ||||||| ||||| |||||||    
T  32972028 ctcaaaaccatttttctctct 32972008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 6591651 - 6591527
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt----gccaaa 633  Q
    |||||||||| ||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||| | |||||  ||||||| ||    |  |||    
T  6591651 aattataactataattaatattacgttcattactcttaattcaatatattctactttgcatttatgataatggagaattgaccaatatttgaaggaaaaa 6591552  T
Q  634 gacactcaaaatcatttctctctct 658  Q
     |||||||||||||||| |||||||    
T  6591551 aacactcaaaatcatttatctctct 6591527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 540 - 658
Target Start/End: Complemental strand, 37490726 - 37490608
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||| ||||||||||||||||||||  ||| | |||||||||||||| ||||| |||||||||||  | |||||| ||||||||||   ||| |||||    
T  37490726 ttataattctaattaatattacttttatcactatcaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaaaaaaaacact 37490627  T
Q  640 caaaatcatttctctctct 658  Q
     |||||||||| |||||||    
T  37490626 taaaatcatttttctctct 37490608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 538 - 616
Target Start/End: Original strand, 9602858 - 9602936
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatg 616  Q
    ||||||||| |||||||||| |||||| || ||||| |||||||||| ||||||||| ||||||||||||| |||||||    
T  9602858 aattataacactaattaatactactttcaccactctcaattcaatatgttctactttgcatttatgataaaaaagaatg 9602936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 538 - 616
Target Start/End: Original strand, 9830429 - 9830507
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatg 616  Q
    ||||||||| |||||||||| |||||| || ||||| |||||||||| ||||||||| ||||||||||||| |||||||    
T  9830429 aattataacactaattaatactactttcaccactctcaattcaatatgttctactttgcatttatgataaaaaagaatg 9830507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 538 - 624
Target Start/End: Complemental strand, 14649029 - 14648943
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    ||||||||||||||||||||||||||| |  ||||| ||||||||||||||||| || |||||||||||| ||  |||| |||||||    
T  14649029 aattataactctaattaatattactttcatcactctcaattcaatatattctaccttgcatttatgataatgagaaatgcaccaata 14648943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 501 - 650
Target Start/End: Complemental strand, 29997176 - 29997027
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| |||||||||||| |||||||||        ||||||||  |||||||||| |||||| || | ||  || |||||||||| |||||| |||||    
T  29997176 atttcatttttcaatacaatattaattaccttttttcaattataatactaattaatactactttcacaattcccaactcaatatattatactttgcattt 29997077  T
Q  601 atgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    |||||||||||||||| ||||||| ||  ||| |||| |||||| |||||    
T  29997076 atgataaagaagaatgcaccaataattaacaaggacattcaaaaccattt 29997027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 658
Target Start/End: Complemental strand, 21412134 - 21412025
Alignment:
Q  549 taattaatattacttttactactcttaattcaatatattctactttacatttatgat-aaagaagaatgtaccaatacttgccaaagacactcaaaatca 647  Q
    ||||||||| |||||| || | ||| ||||||||||||| ||||||||||||||||| ||||||||||| |  |||||||| |||||||| | ||||  |    
T  21412134 taattaatactactttcacca-tctcaattcaatatattttactttacatttatgataaaagaagaatgcataaatacttgacaaagacattgaaaacta 21412036  T
Q  648 tttctctctct 658  Q
    |||||||||||    
T  21412035 tttctctctct 21412025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 538 - 628
Target Start/End: Original strand, 25778741 - 25778831
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttg 628  Q
    |||||||||||||||||||| |||||| |  |||   ||||||||||||| |||||| ||||||||||||  | |||||||||||||||||    
T  25778741 aattataactctaattaatactactttcatcacttccaattcaatatattttactttgcatttatgataagaaggaatgtaccaatacttg 25778831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 540 - 658
Target Start/End: Complemental strand, 38181982 - 38181864
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| |||||| || |||   |||||||||||||||| ||| |||||||||||  | | |||| |||||||||| ||||  |||||    
T  38181982 ttataactctaattaatactactttcacaacttccaattcaatatattctattttgcatttatgatagtggaaaatgcaccaatacttaccaagaacact 38181883  T
Q  640 caaaatcatttctctctct 658  Q
     |||| ||||| |||||||    
T  38181882 taaaaccatttttctctct 38181864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 497 - 658
Target Start/End: Original strand, 8149915 - 8150075
Alignment:
Q  497 attcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttac 596  Q
    |||||||||| |||||||||||| |||||||||        ||||||||||||||||||||||||||| |  |||  || ||| ||||||||||||||      
T  8149915 attcatttcatttttcaatacaatattaattacttttttccaattataactctaattaatattactttcatcactactagttcgatatattctactttga 8150014  T
Q  597 atttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
     |||||||||| | | |||| || |||| ||| |||| ||||| |||| ||||| |||||||    
T  8150015 ttttatgataatggaaaatgcacaaatatttgacaaa-acacttaaaaccatttttctctct 8150075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 569 - 633
Target Start/End: Original strand, 6838090 - 6838154
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaa 633  Q
    ||||| ||||||||||||| ||||||| |||||||||||||||||||| |||||| |||| ||||    
T  6838090 actctcaattcaatatattttactttatatttatgataaagaagaatgcaccaatccttggcaaa 6838154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 499 - 627
Target Start/End: Complemental strand, 31581592 - 31581464
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||        | |||||||||||||||||| |||||| |  | | | |||||||||||||| | |||||||    
T  31581592 tcatttcacttttcaatacaatattaattacttttttccatttataactctaattaatactactttcatcattttcaattcaatatattccattttacat 31581493  T
Q  599 ttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||  | |||||| ||||||||||    
T  31581492 ttatgatattggagaatgcaccaatactt 31581464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 47238214 - 47238334
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||| |||||||||| |||||| || ||||| |  |||| || || |||||| ||||||||||||||||||||| ||||||  |||  || | ||    
T  47238214 aattataacactaattaatactactttcaccactctcatctcaacattttgtactttgcatttatgataaagaagaatgcaccaattgttgataagggca 47238313  T
Q  638 ctcaaaatcatttctctctct 658  Q
    ||||||| ||||| |||||||    
T  47238314 ctcaaaaccatttttctctct 47238334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 40590933 - 40590846
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| |||||||| || ||| | ||||||||||||||||||  ||||||||||  | | |||| ||||||||||    
T  40590933 ttataactctaattaatactacttttattattctcatttcaatatattctactttgtatttatgatagcggaaaatgcaccaatactt 40590846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 29257546 - 29257612
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    ||||||||||||||||||||||||| |  ||||  |||||||||||||| ||||| |||||||||||    
T  29257546 ttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgata 29257612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 624
Target Start/End: Complemental strand, 23186251 - 23186167
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    |||||||||||||||| | ||||||||  ||||  ||||||||||||||||||||  ||||||||||  | |||||| |||||||    
T  23186251 ttataactctaattaacactacttttatcactccaaattcaatatattctactttgtatttatgatagtggagaatgcaccaata 23186167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 544 - 627
Target Start/End: Complemental strand, 1643442 - 1643359
Alignment:
Q  544 aactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||| ||||||  | ||| | |||| ||||||||| ||||| |||||||||| | |||||||| ||||||||||    
T  1643442 aactctaattaatactactttcccaactttcaatttaatatattccactttgcatttatgattatgaagaatgcaccaatactt 1643359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 30463015 - 30463102
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||||||| |  | | | |||||||||||||| | ||||||||||||||   | |||||| ||||||||||    
T  30463015 ttataactctaattaatattactttcatcattttcaattcaatatattccattttacatttatgattgtggagaatgcaccaatactt 30463102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 541 - 627
Target Start/End: Complemental strand, 7425985 - 7425899
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||| |||||| |||||| || |||   |||||||||||||| ||||| |||||||||||  | |||||| ||||||||||    
T  7425985 tataactctagttaatactactttcacaacttccaattcaatatattccactttgcatttatgatagtggagaatgcaccaatactt 7425899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 501 - 627
Target Start/End: Original strand, 17265987 - 17266113
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| ||||||||| ||||||||||||        || |||| ||||||||||||||| ||| |  ||||  ||||| |||||||  ||||| |||||    
T  17265987 atttcacttttcaatataacattaattacttttttccaaatatatctctaattaatattattttcatcactcccaattcgatatatttcactttgcattt 17266086  T
Q  601 atgataaagaagaatgtaccaatactt 627  Q
    ||||||  |||||||| ||||||||||    
T  17266087 atgatagtgaagaatgcaccaatactt 17266113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 541 - 607
Target Start/End: Complemental strand, 25940856 - 25940790
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    ||||||||||||||||| |||||| |  ||||| |||| ||||||||||| ||| ||||||||||||    
T  25940856 tataactctaattaatactactttcatcactctaaatttaatatattctagtttgcatttatgataa 25940790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 34963919 - 34963853
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    ||||||||||||||||||||||||| |  | ||| |||| ||||||||  |||||||||||||||||    
T  34963919 ttataactctaattaatattactttcatcattctcaattaaatatatttcactttacatttatgata 34963853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 658
Target Start/End: Complemental strand, 44604585 - 44604468
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| |||||| |  ||||| || ||||||||||| ||||| | |||||||||  | |||||  ||||||||||  |||  |||||    
T  44604585 ttataactctaattaatactactttcatcactctcaactcaatatattccactttgc-tttatgatagtggagaataaaccaatacttaacaagaacact 44604487  T
Q  640 caaaatcatttctctctct 658  Q
     |||||||||| |||||||    
T  44604486 taaaatcatttttctctct 44604468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 547 - 607
Target Start/End: Original strand, 11726787 - 11726847
Alignment:
Q  547 tctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||||| || ||  ||||| |||||||||| |||||||||| |||||||||||    
T  11726787 tctaattaatattatttgtatcactctcaattcaatatcttctactttatatttatgataa 11726847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 627
Target Start/End: Complemental strand, 21387553 - 21387501
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||| |||||||||||||||||  | |||||| ||||||||||    
T  21387553 aattcaatatattccactttacatttatgatagtggagaatgcaccaatactt 21387501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 21446433 - 21446553
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||  |||||| ||||||||||||  | | | | || |||||||| ||||||| |||||||||||| ||||||| || |||| ||   || ||||    
T  21446433 aattataatactaattgatattacttttatcattttcagtttaatatattatactttatatttatgataaaaaagaatgcactaataattaataaggaca 21446532  T
Q  638 ctcaaaatcatttctctctct 658  Q
    |||||||| |||| |||||||    
T  21446533 ctcaaaattatttttctctct 21446553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 603
Target Start/End: Complemental strand, 40023875 - 40023772
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||        |||||||||||||||||||| || ||| |  | || |||||||||||||| |||||| |||    
T  40023875 tcatttcacttttcaatacaatattaattacttttttt-aattataactctaattaatagtaatttcatcattcataattcaatatattttactttgcat 40023777  T
Q  599 ttatg 603  Q
    |||||    
T  40023776 ttatg 40023772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 658
Target Start/End: Complemental strand, 2842160 - 2842042
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||| | ||||||||| |||||| |  ||||| |||||||||||||  ||||| |||||||||||  | |||||| | ||||||||| |||  |||||    
T  2842160 ttataattataattaatactactttcatcactctaaattcaatatatttcactttgcatttatgatagtggagaatgcatcaatacttgacaataacact 2842061  T
Q  640 caaaatcatttctctctct 658  Q
     || | ||||| |||||||    
T  2842060 taacaccatttttctctct 2842042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 23703915 - 23703981
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||| ||||||||  | | | |||||||||||||  | |||||||||||||||    
T  23703915 ttataactctaattaatactacttttatcattttcaattcaatatatttcattttacatttatgata 23703981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 538 - 616
Target Start/End: Original strand, 30459059 - 30459137
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatg 616  Q
    |||||||| |||||||||||  | ||| |  | ||| |||||||||||||||| ||||||||||| |||||||| ||||    
T  30459059 aattataattctaattaataacattttcagcattctcaattcaatatattctattttacatttattataaagaataatg 30459137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 46288539 - 46288473
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||| |||||| |  ||| | |||||||||||||| ||||| |||| ||||||    
T  46288539 ttataactctaattaatactactttcataactttcaattcaatatattccactttgcattaatgata 46288473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 569 - 658
Target Start/End: Original strand, 9658866 - 9658954
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||| |||||| |||| ||||||||||||||||| |||| | | |||| ||||||| || |  ||||||||||||| ||||| |||||||    
T  9658866 actcctaattcgatatgttctactttacatttatcataagggaaaatgcaccaatagtt-cacaagacactcaaaaccatttttctctct 9658954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 548 - 609
Target Start/End: Complemental strand, 19505870 - 19505809
Alignment:
Q  548 ctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaag 609  Q
    ||||||||||||| ||| |  |||  ||||||||||| || |||||||||||||||||||||    
T  19505870 ctaattaatattaatttcatcacttataattcaatatcttttactttacatttatgataaag 19505809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 607
Target Start/End: Original strand, 39171135 - 39171204
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||||| || |  || |||||  |||||||||| |||||||| |||||| ||||||||||||    
T  39171135 aattataactctaaatattgctatttttatcactcttaatttaatatattatactttgcatttatgataa 39171204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 607
Target Start/End: Original strand, 39498671 - 39498740
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||| |||||||||||||||||| |  ||||  ||||||||||||| || |||  |||||||||||    
T  39498671 aattataattctaattaatattactttcatcactcccaattcaatatattatattttgaatttatgataa 39498740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 538 - 594
Target Start/End: Complemental strand, 1102053 - 1101997
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctacttt 594  Q
    |||||||| | |||||||||||| ||| | |||||| ||||| ||||||||||||||    
T  1102053 aattataattttaattaatattattttcattactctcaattcgatatattctacttt 1101997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 11616560 - 11616648
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaa-tatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||  ||||| || ||||  ||||||| ||||||| ||||| ||| |||||||  | |||||| ||||||||||    
T  11616560 ttataactctaattaatacaactttcaccactcccaattcaattatattccactttgcatatatgatagtggagaatgcaccaatactt 11616648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 540 - 604
Target Start/End: Complemental strand, 29434688 - 29434624
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatga 604  Q
    |||||||||||||||||| |||||| |  | ||  |||||||||||||| ||||| |||||||||    
T  29434688 ttataactctaattaatactactttcatcattcacaattcaatatattccactttgcatttatga 29434624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 543 - 607
Target Start/End: Complemental strand, 34001964 - 34001900
Alignment:
Q  543 taactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    ||||| ||||||||| |||||| |  || || |||||||||||||| ||||| ||||||||||||    
T  34001964 taactgtaattaatactactttcatcaccctcaattcaatatattccactttgcatttatgataa 34001900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 540 - 604
Target Start/End: Original strand, 36117660 - 36117724
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatga 604  Q
    |||||||| |||||||||| ||||| |  | | | |||||||||||||| |||||||||||||||    
T  36117660 ttataactttaattaatatcactttcatcattttcaattcaatatattccactttacatttatga 36117724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 550 - 606
Target Start/End: Complemental strand, 46095518 - 46095462
Alignment:
Q  550 aattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||| ||||||||  ||||| |||||||||||||  ||||| |||||||||||    
T  46095518 aattaatactacttttatcactctcaattcaatatatttcactttgcatttatgata 46095462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 575 - 627
Target Start/End: Complemental strand, 49100575 - 49100523
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||| |||||||||||||||||  | |||||  ||||||||||    
T  49100575 aattcaatatattccactttacatttatgatagtggagaataaaccaatactt 49100523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 500 - 658
Target Start/End: Complemental strand, 6549 - 6390
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnn-aattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    ||||||| ||||||||||||||||||||||         ||||||||||||||||||||||||||| || ||||| ||||||||||||| ||||||||||    
T  6549 catttcaattttcaatacaacattaattacttttttttcaattataactctaattaatattactttcaccactctcaattcaatatattttactttacat 6450  T
Q  599 ttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||||||||| | ||||||||| | ||||||||||||||||| |||||||||    
T  6449 ttatgataaagaagaatgcatcaatacttgactaagacactcaaaatcatctctctctct 6390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 352571 - 352451
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||||||| ||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  352571 aattataactctatttaatattactttcactactcccaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttaacaaagaca 352472  T
Q  638 ctcaaaatcatttctctctct 658  Q
    |||||||| |||| |||||||    
T  352471 ctcaaaattatttttctctct 352451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 540 - 650
Target Start/End: Complemental strand, 35998225 - 35998115
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| |||||| || ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  35998225 ttataactctaattaatactactttcaccactctcaattcaatatattttactttacatttatgataaagaagaatgtaccaatacttgataaagacact 35998126  T
Q  640 caaaatcattt 650  Q
    |||||| ||||    
T  35998125 caaaattattt 35998115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 540 - 643
Target Start/End: Complemental strand, 39053009 - 39052906
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  39053009 ttataactctaattaatactactttcaccactctcaattcaatatattctactttacatttatgataaagaagaatgcaccaatacttgataaagacact 39052910  T
Q  640 caaa 643  Q
    ||||    
T  39052909 caaa 39052906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 164 - 390
Target Start/End: Complemental strand, 28940921 - 28940695
Alignment:
Q  164 aagatggtgtttcgggaacaacatgccccatcccaccagggaggaacttcacatatattcttcaagtgaaggatcaaattggaagcttttactactttcc 263  Q
    ||||||| ||||  || |||||||| |||||||| || |||| |||||||||||| |  |||||||| || ||||||||||||||||| | ||| |||||    
T  28940921 aagatggagtttatggtacaacatgtcccatccctcctgggaagaacttcacatacacacttcaagtcaaagatcaaattggaagcttcttctattttcc 28940822  T
Q  264 atctctagcatttcaaaaagcagctggtggttttggaggcattaggatactcagtagacctagaattccagtccctttccctgaaccagctggagattac 363  Q
    |||||| || ||||| || ||||||||||||||||||  ||| |  || || || ||||| || ||||| || ||||||||||||||||||   ||||||    
T  28940821 atctcttgcttttcacaaggcagctggtggttttggatccatcaaaatccttagcagaccaaggattcctgttcctttccctgaaccagctaatgattac 28940722  T
Q  364 actgtccttattggtgattggtacaag 390  Q
    ||  | |||||||||||||||||||||    
T  28940721 acatttcttattggtgattggtacaag 28940695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 490 - 644
Target Start/End: Original strand, 44633105 - 44633259
Alignment:
Q  490 aatctttattcatttcagttttcaatacaacattaattacnnnnnnnn-aattataactctaattaatattacttttactactcttaattcaatatattc 588  Q
    |||||| | |||||||| ||||||||||||||||||||||         |||||||||||||||||||| |||||| || ||| | |||||||||| |||    
T  44633105 aatcttgactcatttcacttttcaatacaacattaattactttttttccaattataactctaattaatactactttcaccactttcaattcaatat-ttc 44633203  T
Q  589 tactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    |||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  44633204 tactttacatttatcataaagaagaatgcaccaatacttgacaaagacactcaaaa 44633259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 538 - 641
Target Start/End: Complemental strand, 55360458 - 55360355
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||||||||||||||||||||| |  ||||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||||| ||||||||    
T  55360458 aattataactctaattaatattactttcatcactctcaattcaatatattgtactttacatttatgataaagaagaatgcgccaatacttgacaaagaca 55360359  T
Q  638 ctca 641  Q
    ||||    
T  55360358 ctca 55360355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 436 - 650
Target Start/End: Complemental strand, 42051870 - 42051654
Alignment:
Q  436 tactcgctccgtcccgtaataactgagtcatttataaaaaat--tactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnn 533  Q
    ||||| ||||||||||||||||||||| ||||| |||||||   || | || | | |||||| |  ||||| | |||||||||||| |||||||||        
T  42051870 tactccctccgtcccgtaataactgagccatttgtaaaaaaaaatattatcccaggaatcttaacccattttaattttcaatacaatattaattactttt 42051771  T
Q  534 nnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaa 633  Q
        |||||||| |||||||| ||||| ||| || |||   |||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  42051770 tttcaattataattctaattattattattttcaccacttccaattcattatattctactttacatttatgataaagaagaatgcaccaatacttgctaaa 42051671  T
Q  634 gacactcaaaatcattt 650  Q
    |||||| |||| |||||    
T  42051670 gacactaaaaaccattt 42051654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 490 - 654
Target Start/End: Original strand, 28279786 - 28279950
Alignment:
Q  490 aatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattct 589  Q
    |||||| | |||||||| ||||||||||||||||||||||        |||||||||||||||||||| || ||| ||| ||   |||| ||||||||||    
T  28279786 aatcttgactcatttcacttttcaatacaacattaattactttttttcaattataactctaattaatactattttcactgcttccaattaaatatattct 28279885  T
Q  590 actttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctct 654  Q
    |||||| ||||||||||||||| |||| ||||||||||  |||||||||||||||  ||||||||    
T  28279886 actttatatttatgataaagaaaaatgcaccaatacttaacaaagacactcaaaactatttctct 28279950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 538 - 644
Target Start/End: Complemental strand, 32949959 - 32949853
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||| || ||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||| |||  |||||||    
T  32949959 aattattacactaattaatattattttcactactctcaattcaatatattctactttacatttatgataaagaaaaatgcaccaatagttgataaagaca 32949860  T
Q  638 ctcaaaa 644  Q
    |||||||    
T  32949859 ctcaaaa 32949853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 500 - 611
Target Start/End: Complemental strand, 29550875 - 29550764
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| ||||||||||||||||||||||        |||||||||||||||||||| |||||| || ||||  |||||||||||||||||||||||||    
T  29550875 catttcacttttcaatacaacattaattaccttttttcaattataactctaattaatactactttcacaactcccaattcaatatattctactttacatt 29550776  T
Q  600 tatgataaagaa 611  Q
    ||||||||||||    
T  29550775 tatgataaagaa 29550764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 499 - 658
Target Start/End: Original strand, 38319869 - 38320028
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||        ||||||||| |||||||||| |||||| |  ||||| |||||||||||||||||||| |||    
T  38319869 tcatttcacttttcaatacaatattaattacttttttccaattataacactaattaatactactttcatcactctcaattcaatatattctactttgcat 38319968  T
Q  599 ttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||||||||| ||||||| |||  || | ||||||||  ||||| |||||||    
T  38319969 ttatgataaagaagaatgcaccaatagttgataagggcactcaaacccatttttctctct 38320028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 538 - 644
Target Start/End: Complemental strand, 10099835 - 10099729
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||| |||||| || ||||  ||||||||||||||||||||| ||||||||||||||| |||| ||||||||||   ||| |||    
T  10099835 aattataactctaattaatactactttcacaactcccaattcaatatattctactttaaatttatgataaagaaaaatgcaccaatacttaaaaaataca 10099736  T
Q  638 ctcaaaa 644  Q
    |||||||    
T  10099735 ctcaaaa 10099729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 540 - 657
Target Start/End: Complemental strand, 34791060 - 34790942
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctac-tttacatttatgataaagaagaatgtaccaatacttgccaaagacac 638  Q
    |||||||||||||||||| ||| ||||  ||||| ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||  |||  |||    
T  34791060 ttataactctaattaatactacatttatcactctcaattcaatatattctacttttacttttatgataaagaagaatgcacaaatacttgataaaagcac 34790961  T
Q  639 tcaaaatcatttctctctc 657  Q
    |||||||||||| ||||||    
T  34790960 tcaaaatcatttttctctc 34790942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 545 - 658
Target Start/End: Complemental strand, 48400734 - 48400621
Alignment:
Q  545 actctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    |||||||||||||| ||||| || ||||| |||||||||||||||||||||||||||||||||||||||||  | |||||||||  |||  || | ||||    
T  48400734 actctaattaatatcactttcacaactctcaattcaatatattctactttacatttatgataaagaagaatacatcaatacttgataaaagcattaaaaa 48400635  T
Q  645 tcatttctctctct 658  Q
    |||||| |||||||    
T  48400634 tcatttttctctct 48400621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 538 - 633
Target Start/End: Complemental strand, 22872498 - 22872403
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaa 633  Q
    ||||||||||||||||||||||||||| |  ||||| |||||||||||||| ||||| |||||||||||| | |||||| ||||||||||| ||||    
T  22872498 aattataactctaattaatattactttcatcactctcaattcaatatattccactttgcatttatgataatggagaatgcaccaatacttgacaaa 22872403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 538 - 643
Target Start/End: Original strand, 3505719 - 3505823
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||  |||||| |||| ||| |||||||||||||||||||||||||||||||||| || |||| | ||||| ||  ||||||||    
T  3505719 aattataactctaattaatcatactttcactaatctcaattcaatatattctactttacatttatgataaa-aaaaatgcatcaatagttaacaaagaca 3505817  T
Q  638 ctcaaa 643  Q
    ||||||    
T  3505818 ctcaaa 3505823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 569 - 658
Target Start/End: Original strand, 35029063 - 35029152
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||  |||| |||||||    
T  35029063 actcctaatttaatttattctactttacatttatgataaagaagaatgtactaatacttgacaaagacactcgaaactatttttctctct 35029152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 511 - 658
Target Start/End: Original strand, 25149421 - 25149569
Alignment:
Q  511 tcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgat-aaag 609  Q
    |||||||||||||||||||        |||||||||||||||||||| |||||| || |||   |||||||||||||| |||||||||||||||| ||||    
T  25149421 tcaatacaacattaattacttttttccaattataactctaattaatactactttcacaacttccaattcaatatattccactttacatttatgataaaag 25149520  T
Q  610 aagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    | ||||| ||||||||||   |||| |||||||||  |||| |||||||    
T  25149521 aggaatgcaccaatacttaaaaaaggcactcaaaactatttttctctct 25149569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 28330791 - 28330911
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||| ||||||||||||||||| || ||||  ||||||||||| ||| |||| ||||||||||||||||||||| ||||||| |||  || | ||    
T  28330791 aattataacactaattaatattactttcaccactcccaattcaatataatctgctttgcatttatgataaagaagaatgcaccaatagttgataagggca 28330890  T
Q  638 ctcaaaatcatttctctctct 658  Q
    ||||||  ||||| |||||||    
T  28330891 ctcaaacccatttttctctct 28330911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 442 - 616
Target Start/End: Complemental strand, 36047308 - 36047132
Alignment:
Q  442 ctccgtcccgtaataactgagtcatttataa-aaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnn-aa 539  Q
    ||||||||| |||||||||||||||||  || |||| || |||| | | ||  || | |||||||| |||||||||||| |||||||||         ||    
T  36047308 ctccgtcccataataactgagtcatttgcaagaaaaatattgtctcagaaaaattgactcatttcacttttcaatacaatattaattactttttttccaa 36047209  T
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatg 616  Q
     ||||||  |||||||||||||||| || ||||| |||||||||||||||||||| |||||||||||||||||||||    
T  36047208 ctataacattaattaatattactttcaccactctcaattcaatatattctactttgcatttatgataaagaagaatg 36047132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 538 - 654
Target Start/End: Original strand, 37786958 - 37787074
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||| | |||||||||||| ||| || ||| | |||| ||||||||||| |||||||||||| |||||||||||| | || |||||| |||| |||    
T  37786958 aattataattttaattaatattattttcaccactttcaatttaatatattctattttacatttatggtaaagaagaatgcatcactacttgacaaacaca 37787057  T
Q  638 ctcaaaatcatttctct 654  Q
    |||||| ||||||||||    
T  37787058 ctcaaactcatttctct 37787074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 38160262 - 38160142
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||||||||||||  ||||| |||||||||||||  |||||  ||||||||||| | |||||| | ||||| ||| ||||||||    
T  38160262 aattataactctaattaatattacttttatcactctcaattcaatatatttcactttgtatttatgataatggagaatgcatcaatatttgacaaagaca 38160163  T
Q  638 ctcaaaatcatttctctctct 658  Q
    || ||||  |||| |||||||    
T  38160162 cttaaaacaatttttctctct 38160142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 509 - 616
Target Start/End: Original strand, 42132781 - 42132888
Alignment:
Q  509 tttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaa 608  Q
    ||||||||||| |||||||||        ||||||||| ||||||||||||||||| || |||   |||||||||||||||||||| |||||||||||||    
T  42132781 tttcaatacaatattaattacttttttccaattataacactaattaatattactttcaccacttccaattcaatatattctactttgcatttatgataaa 42132880  T
Q  609 gaagaatg 616  Q
    ||||||||    
T  42132881 gaagaatg 42132888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 538 - 625
Target Start/End: Complemental strand, 47277792 - 47277705
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatac 625  Q
    |||||||||| ||||||||| |||||| |  ||||| ||||||||||||| ||||||||||||||||||||||| ||||||| |||||    
T  47277792 aattataactataattaatactactttaatcactctcaattcaatatattttactttacatttatgataaagaaaaatgtacaaatac 47277705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 540 - 625
Target Start/End: Original strand, 48740519 - 48740604
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatac 625  Q
    |||||||||||||||||||||||||||  | | |||||||||||||||| |||||||||||||||||  | |||||| ||||||||    
T  48740519 ttataactctaattaatattacttttatcatttttaattcaatatattccactttacatttatgatagtggagaatgcaccaatac 48740604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 51076524 - 51076401
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattcta---ctttacatttatgataaagaagaatgtaccaatacttgccaaag 634  Q
    ||||||||||||||||||||||| |||||  ||||| |||| |||||||| ||   |||||||||| |||||| || |||| |  ||||||||| |||||    
T  51076524 aattataactctaattaatattaattttatcactctcaatttaatatattttagtactttacatttgtgataacgatgaatatgtcaatacttggcaaag 51076425  T
Q  635 acactcaaaatcatttctctctct 658  Q
    ||| ||| ||||||||||||||||    
T  51076424 acattcacaatcatttctctctct 51076401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 20964398 - 20964278
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||  |||||||||| |||||| || |||   ||||| |||||||||||||| |||||| |||||||||||||| ||||||| |||  |||||||    
T  20964398 aattataagactaattaatactactttcaccacttccaattcgatatattctactttgcatttacgataaagaagaatgcaccaatagttgataaagaca 20964299  T
Q  638 ctcaaaatcatttctctctct 658  Q
    | |||| |||||| |||||||    
T  20964298 cgcaaactcatttttctctct 20964278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 538 - 650
Target Start/End: Complemental strand, 22020620 - 22020509
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||||||||||| || |||||| || | ||| |||||||||||||||||||| |||||||||| ||||| ||||||| |||| ||| |||||  |    
T  22020620 aattataactctaattattactactttcaccattctcaattcaatatattctactttgcatttatgat-aagaaaaatgtacaaatagttgacaaaggaa 22020522  T
Q  638 ctcaaaatcattt 650  Q
    ||||||| |||||    
T  22020521 ctcaaaaccattt 22020509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 500 - 616
Target Start/End: Complemental strand, 37316070 - 37315954
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||||||||||| |||||||||        ||||||||| |||||||||| |||||| || ||||  ||||||| |||||||||||| ||||    
T  37316070 catttcacttttcaatacaatattaattacatttttccaattataacactaattaatactactttcaccactcccaattcaacatattctactttgcatt 37315971  T
Q  600 tatgataaagaagaatg 616  Q
    |||||||||||| ||||    
T  37315970 tatgataaagaaaaatg 37315954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 539 - 650
Target Start/End: Original strand, 27977145 - 27977256
Alignment:
Q  539 attataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacac 638  Q
    |||||||||||||||||||| ||||| |  ||||| |||||||||||||| ||||| ||||||| |||  | |||||| ||||||||||  |||| ||||    
T  27977145 attataactctaattaatatcactttcatcactctcaattcaatatattccactttgcatttataatagtggagaatgcaccaatacttaacaaaaacac 27977244  T
Q  639 tcaaaatcattt 650  Q
    | ||||||||||    
T  27977245 ttaaaatcattt 27977256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 540 - 658
Target Start/End: Original strand, 42544208 - 42544326
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||||||||||||  ||||  |||||||||||||| ||||| |||||||||||  | |||||  || |||||||  |||   ||||    
T  42544208 ttataactctaattaatattacttttatcactcacaattcaatatattccactttgcatttatgatagtggagaatagactaatacttaacaagagcact 42544307  T
Q  640 caaaatcatttctctctct 658  Q
     ||||||||||||||||||    
T  42544308 taaaatcatttctctctct 42544326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 501 - 658
Target Start/End: Original strand, 4354408 - 4354565
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| |||||||| ||||||||||||         |||||||||| ||||||||| |||||| || ||||| |||| |||||||||||  ||||||||    
T  4354408 atttcacttttcaatgcaacattaattatttttctccaattataactataattaatactactttcacaactctcaatttaatatattctaaattacattt 4354507  T
Q  601 atgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||| | || ||||||| ||   ||| ||||||||||  |||| |||||||    
T  4354508 atgataaagaatagtgcaccaatatttaaaaaaaacactcaaaactatttttctctct 4354565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 3686010 - 3686097
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||||||| |  ||||| |||||||||||||| ||||| ||||||| |||  | |||||| ||||||||||    
T  3686010 ttataactctaattaatattactttcatcactctcaattcaatatattcaactttgcatttataatagtggagaatgcaccaatactt 3686097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 575 - 658
Target Start/End: Original strand, 49401690 - 49401773
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||||||||||||||||||| |||||||| |||||| |||||||||  || |||| ||||||  |||| |||||||    
T  49401690 aattcaatatattctactttacatttataataaagaacaatgtatcaatacttgaaaaggacattcaaaactatttttctctct 49401773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 538 - 624
Target Start/End: Complemental strand, 49218892 - 49218807
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    |||||||||  |||||||||||||||| || ||||| ||||||||||||| ||||||  ||||||||||||| |||||| |||||||    
T  49218892 aattataacattaattaatattactttcaccactctcaattcaatatattatactttgaatttatgataaag-agaatgcaccaata 49218807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 569 - 650
Target Start/End: Original strand, 53848674 - 53848755
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    ||||| |||||||||||||||||||| ||||||||||||| || |||| ||||||| |||  || | |||||||||||||||    
T  53848674 actctcaattcaatatattctactttgcatttatgataaataataatgcaccaatagttgataagggcactcaaaatcattt 53848755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 442 - 615
Target Start/End: Original strand, 54217243 - 54217416
Alignment:
Q  442 ctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaatt 541  Q
    ||||||||| ||||| |||||||||||| |||||| || |||    | ||  || | |||||||| |||||||||||| |||||||||        ||||    
T  54217243 ctccgtcccataatagctgagtcatttacaaaaaaatattgttctagaaaaattgactcatttcatttttcaatacaatattaattacttttttccaatt 54217342  T
Q  542 ataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaat 615  Q
    |||||  |||||||||  ||||| || ||||  ||||||||||||| |||||| || |||||||||||||||||    
T  54217343 ataacattaattaataccactttcaccactcccaattcaatatattatactttgcagttatgataaagaagaat 54217416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 436 - 656
Target Start/End: Complemental strand, 4360619 - 4360400
Alignment:
Q  436 tactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnn 535  Q
    ||||| ||||||||| ||||||||||| |||||| |||||| || ||||||   ||  || |   |||||| ||||||||||||||||||||||          
T  4360619 tactccctccgtcccataataactgagccatttacaaaaaaatattgtcacaaaaaa-ttgaccaatttcacttttcaatacaacattaattactttttt 4360521  T
Q  536 nnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaaga 635  Q
      || ||||||||||||||||| |||||| |  | ||  |||||||||||||| ||||| |||||||| ||  | |||||| ||||||||||  ||||      
T  4360520 ccaaatataactctaattaatactactttcatcattcacaattcaatatattccactttgcatttatgctagtggagaatgcaccaatacttaacaaaag 4360421  T
Q  636 cactcaaaatcatttctctct 656  Q
    |||| |||| ||||| |||||    
T  4360420 cacttaaaaccatttttctct 4360400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 540 - 616
Target Start/End: Original strand, 8759778 - 8759854
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatg 616  Q
    ||||||| |||||||||| || ||| || ||||  |||||||||||||||||||| |||||||||||||||| ||||    
T  8759778 ttataacactaattaataataatttcacaactcccaattcaatatattctactttgcatttatgataaagaaaaatg 8759854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 569 - 645
Target Start/End: Complemental strand, 30680517 - 30680441
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaat 645  Q
    |||| ||||| |||||||| |||||||||||||| ||||||||||||  ||||||| | | ||||||||||||||||    
T  30680517 actcctaatttaatatattatactttacatttatcataaagaagaatccaccaatattcgacaaagacactcaaaat 30680441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 49448838 - 49448958
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||| |||||| |  | ||| ||||||||||||| |||||| ||||||||||||   |||||| || |||||||| |||   ||    
T  49448838 aattataactctaattaatactactttcatcattctcaattcaatatattatactttgcatttatgataatagagaatgcacaaatacttgacaagagca 49448937  T
Q  638 ctcaaaatcatttctctctct 658  Q
    || |||| ||||| |||||||    
T  49448938 cttaaaaccatttttctctct 49448958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 18849867 - 18849780
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||||||| || |||   |||||||||||||  ||||| |||||||||||  | |||||| ||||||||||    
T  18849867 ttataactctaattaatattactttcacaacttccaattcaatatatttcactttgcatttatgatagtggagaatgcaccaatactt 18849780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 49306586 - 49306673
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| |||||| |  |||| ||||||||||||||| ||||| |||||||||||  | |||||  ||||||||||    
T  49306586 ttataactctaattaatactactttcatcactcctaattcaatatattccactttgcatttatgataggggagaatagaccaatactt 49306673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 624
Target Start/End: Complemental strand, 11583981 - 11583895
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    |||||||||  |||||||||||||||| |  ||||| |||| |||||||| |||||||||||||| |||||||| |||  |||||||    
T  11583981 aattataacattaattaatattactttcatcactctcaatttaatatattttactttacatttataataaagaataatacaccaata 11583895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 29644354 - 29644420
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||| ||||||||| |||||| |  | ||| ||||||||||||||||||||||||||||||||    
T  29644354 ttataactataattaatactactttcatcattctcaattcaatatattctactttacatttatgata 29644420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 569 - 655
Target Start/End: Complemental strand, 33093538 - 33093453
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctc 655  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| |  || ||| |||| |||| |||||||||| ||| ||||||    
T  33093538 actctcaattcaatatatcctactttacatttatgataaagaagatttcactaattcttgacaaa-acactcaaaaccatctctctc 33093453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 37309697 - 37309763
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    ||||||||||||||||||||||||| |  ||||| |||||||||||||  ||||| |||||||||||    
T  37309697 ttataactctaattaatattactttcatcactctcaattcaatatatttaactttgcatttatgata 37309763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 41710252 - 41710186
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    ||||||||||||||||||||||||| |  ||||  |||||||||||||| ||||| |||||||||||    
T  41710252 ttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgata 41710186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 644
Target Start/End: Original strand, 55293509 - 55293579
Alignment:
Q  575 aattcaatata-ttctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    ||||||||||| |||||||||| |||||||||||| ||||||| |||||| |||  |||||||||||||||    
T  55293509 aattcaatataattctactttatatttatgataaacaagaatgcaccaattcttatcaaagacactcaaaa 55293579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 607
Target Start/End: Complemental strand, 5499539 - 5499470
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||| |||||||||||||||||||| |  |||| ||||||||||||||||| ||| ||| ||||||||    
T  5499539 aattatgactctaattaatattactttcatcactcctaattcaatatattctattttgcatctatgataa 5499470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 607
Target Start/End: Complemental strand, 25250703 - 25250634
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||||||||||| || ||| |  |||||||||| ||||||||||||| | ||||||||||||    
T  25250703 aattataactctaattaatactagtttcatcactcttaatttaatatattctactatgcatttatgataa 25250634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 295
Target Start/End: Original strand, 17346341 - 17346429
Alignment:
Q  207 gaacttcacatatattcttcaagtgaaggatcaaattggaagcttttactactttccatctctagcatttcaaaaagcagctggtggtt 295  Q
    ||||||||| |||||||||||||| || ||||| ||||| |||| || ||||||||| || || |||||||| || ||||| |||||||    
T  17346341 gaacttcacttatattcttcaagtaaaagatcagattggtagctatttctactttccttcccttgcatttcacaaggcagcaggtggtt 17346429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 501 - 625
Target Start/End: Original strand, 41436441 - 41436565
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| |||||||||||| ||||||||         |||||||||||||||||||| |||||| |  | ||  ||||||| |||||||||||| |||||    
T  41436441 atttcacttttcaatacaatattaattatttttttctaattataactctaattaatactactttcatcattcgcaattcaaaatattctactttgcattt 41436540  T
Q  601 atgataaagaagaatgtaccaatac 625  Q
    ||||||  | |||||| ||||||||    
T  41436541 atgatagtggagaatgcaccaatac 41436565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 654
Target Start/End: Original strand, 46958719 - 46958834
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||| || |||||||| |||||| |  ||||| |||||||||||||||||||| | ||||||||||  | ||||| ||| ||||||  | ||||||    
T  46958719 aattataattcaaattaatactactttaatcactctcaattcaatatattctactttgcgtttatgataagaaggaatgcaccgatacttaac-aagaca 46958817  T
Q  638 ctcaaaatcatttctct 654  Q
    |||||||  ||||||||    
T  46958818 ctcaaaactatttctct 46958834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 606
Target Start/End: Original strand, 47846896 - 47846964
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||||| |||||| |  |||| ||||||||||||||  ||||| |||||||||||    
T  47846896 aattataactctaattaatactactttcatcactcctaattcaatatatttcactttgcatttatgata 47846964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 538 - 606
Target Start/End: Complemental strand, 51572338 - 51572270
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||||| ||||||||  |||   |||||||||||||  |||||||||||||||||    
T  51572338 aattataactctaattaatactacttttatcacttccaattcaatatattacactttacatttatgata 51572270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 575 - 650
Target Start/End: Complemental strand, 25902535 - 25902460
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    |||||||||||||| |||||| |||||| | ||||||||||| || |||||||  |||| |||||||||| |||||    
T  25902535 aattcaatatattcaactttatatttataacaaagaagaatgcactaatacttaacaaaaacactcaaaaccattt 25902460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 39979779 - 39979866
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||||||| |  | |   |||||||||||||| |||||||||||||||||  | |||||| ||| ||||||    
T  39979779 ttataactctaattaatattactttcatcatttccaattcaatatattccactttacatttatgatagtggagaatgcaccgatactt 39979866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 41203736 - 41203823
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| ||||||||  ||| | |||||||||||||| |||||  ||||||| ||  |||||||| | ||||||||    
T  41203736 ttataactctaattaatactacttttatcactttcaattcaatatattccactttgtatttatggtagtgaagaatgcatcaatactt 41203823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 577 - 643
Target Start/End: Original strand, 13719811 - 13719877
Alignment:
Q  577 ttcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaa 643  Q
    ||||||||||| ||||||||||||||||||||||| |||  | || |||||  ||||||||||||||    
T  13719811 ttcaatatattatactttacatttatgataaagaataatacatcattacttaacaaagacactcaaa 13719877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 26799324 - 26799258
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||| |||||| |  | ||| |||||||||||||||| ||| |||||||||||    
T  26799324 ttataactctaattaatagtactttcatcattctcaattcaatatattctattttgcatttatgata 26799258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 38976990 - 38977056
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||| |||||| |  | | | |||||||||||||| |||||||||||||||||    
T  38976990 ttataactctaattaatactactttcatcattttcaattcaatatattccactttacatttatgata 38977056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 538 - 607
Target Start/End: Complemental strand, 9052160 - 9052091
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    ||||||||| |||||||||| |||||| |  | ||| ||||||||||||||||||| |||||||| ||||    
T  9052160 aattataacactaattaatactactttcatcattctgaattcaatatattctacttaacatttataataa 9052091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 538 - 643
Target Start/End: Complemental strand, 29990582 - 29990478
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||| ||||||||| || ||||   ||| | |||||||||||||| |||||| ||||||||||   ||||||| | ||||||||| | ||||||    
T  29990582 aattataactttaattaatactatttttttcactttcaattcaatatattcaactttatatttatgatatgaaagaatgcatcaatacttgac-aagaca 29990484  T
Q  638 ctcaaa 643  Q
    ||||||    
T  29990483 ctcaaa 29990478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 604
Target Start/End: Complemental strand, 1825356 - 1825292
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatga 604  Q
    ||||||||||||||||||||| ||| |  | | | |||||||||||||| |||||||||||||||    
T  1825356 ttataactctaattaatattattttcatcattttcaattcaatatattccactttacatttatga 1825292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 538 - 606
Target Start/End: Original strand, 17237040 - 17237108
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||||| |||||| |   || | |||||||||||||| ||||| |||||||||||    
T  17237040 aattataactctaattaatactactttcatcgctttcaattcaatatattccactttgcatttatgata 17237108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 590 - 650
Target Start/End: Complemental strand, 17317728 - 17317668
Alignment:
Q  590 actttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcattt 650  Q
    |||||||||||||||||| || ||||||||| ||||||| ||| ||| ||||||| |||||    
T  17317728 actttacatttatgataatgatgaatgtaccgatacttgtcaaggactctcaaaaccattt 17317668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 40021058 - 40020938
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||||||||||||||| |||| | |  ||||  |||| ||||||||||  ||| ||| |||||||| |   |||| ||||||||||| |||| |||    
T  40021058 aattataactctaattaatactactgtcatcactcccaatttaatatattcttttttgcatctatgataatggtaaatgcaccaatacttgacaaaaaca 40020959  T
Q  638 ctcaaaatcatttctctctct 658  Q
     |||||| ||||| |||||||    
T  40020958 ttcaaaaccatttttctctct 40020938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 28974305 - 28974392
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||| ||| ||||||| |||||| |  ||||| | ||||||||||||  |||| |||||||||||| | |||||| ||||||||||    
T  28974305 ttataattctgattaatactactttcatcactctcatttcaatatattcccctttgcatttatgataatggagaatgcaccaatactt 28974392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 42015289 - 42015364
Alignment:
Q  224 ttcaagtgaaggatcaaattggaagcttttactactttccatctctagcatttcaaaaagcagctggtggttttgg 299  Q
    |||||||||||||||| |||||||| |||| ||||||||| || ||    ||||||| |||||||||||| |||||    
T  42015289 ttcaagtgaaggatcagattggaagttttttctactttccttcacttaattttcaaagagcagctggtggatttgg 42015364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 1796350 - 1796284
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||| ||| |||||| || |||   |||||||||||||| ||||| |||||||||||    
T  1796350 ttataactctaatttatactactttcacaacttccaattcaatatattccactttgcatttatgata 1796284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 583 - 649
Target Start/End: Original strand, 5291706 - 5291772
Alignment:
Q  583 atattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatt 649  Q
    ||||||||| ||||||||||||||||||| |||| || |||||||| | ||  ||||||||| ||||    
T  5291706 atattctacattacatttatgataaagaataatgcactaatacttgactaaagcactcaaaaccatt 5291772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 39258380 - 39258314
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||| ||||||||| |||||| |  ||||| |||| ||||||||| | |||||||||||||||    
T  39258380 ttataactttaattaataatactttcatcactctcaatttaatatattccattttacatttatgata 39258314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 54729591 - 54729526
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||| |||||| |  || || |||||||||||||| ||||| |||||||||||    
T  54729591 ttataactctaattaatactactttcatcac-ctcaattcaatatattccactttgcatttatgata 54729526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 569 - 658
Target Start/End: Original strand, 13529890 - 13529978
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||| |||||| |||| ||||||||||||||||| |||| | | |||| ||||||| || |  ||||||||||||| ||||| |||||||    
T  13529890 actcctaattcgatatgttctactttacatttatcataagggaaaatgcaccaatagtt-cacaagacactcaaaaccatttttctctct 13529978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 550 - 607
Target Start/End: Complemental strand, 25125174 - 25125117
Alignment:
Q  550 aattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    ||||||||||||||| |  | || | |||||||||||| |||||||||||||||||||    
T  25125174 aattaatattactttcatcattcctcattcaatatattttactttacatttatgataa 25125117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 29136899 - 29136779
Alignment:
Q  538 aattataactctaattaatattacttttact-actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagac 636  Q
    |||||||||||||||||||| || ||||| | ||||  |||||||||| ||| ||||| ||||||||||||||  ||||| |||  |||||| |||| |     
T  29136899 aattataactctaattaataata-ttttagtcactccaaattcaatatcttccactttgcatttatgataaaggtgaatgcacccgtacttgacaaaaat 29136801  T
Q  637 actcaaaatcatttctctctct 658  Q
     || |||| ||||| |||||||    
T  29136800 gcttaaaaccatttttctctct 29136779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 540 - 588
Target Start/End: Complemental strand, 29815205 - 29815157
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattc 588  Q
    ||||||||||||||||||||||||| || |||   ||||||||||||||    
T  29815205 ttataactctaattaatattactttcaccacttccaattcaatatattc 29815157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 5357928 - 5357808
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||||||||||||||||||||| || |||   ||| |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  5357928 aattataactctaattaatattactttcaccacttccaatacaatatattctactttacatttatgataaagaagaatgaaccaatacttaacaaagaca 5357829  T
Q  638 ctcaaaatcatttctctctct 658  Q
    ||||||| ||||| |||||||    
T  5357828 ctcaaaaccatttttctctct 5357808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 442 - 658
Target Start/End: Complemental strand, 39061161 - 39060945
Alignment:
Q  442 ctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnnnnnnaatt 541  Q
    |||| |||| |||||||||| ||||||| |||||| || |||||  | ||  || |||||||||| |||||||||||| ||||||||         ||||    
T  39061161 ctccatcccataataactgaatcatttacaaaaaaatattgtcatagaaaaattgattcatttcacttttcaatacaatattaattaaatttttttaatt 39061062  T
Q  542 ataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactca 641  Q
    |||||  |||||||||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||||||| || | |  ||| ||| ||||||||    
T  39061061 ataacattaattaatattactttcaccactcctaattcaatatattctactttgcatttatgataaagaagaatgcactagtggttgacaaggacactca 39060962  T
Q  642 aaatcatttctctctct 658  Q
    || |||||| |||||||    
T  39060961 aactcatttttctctct 39060945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 434 - 650
Target Start/End: Complemental strand, 36007104 - 36006891
Alignment:
Q  434 tatactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnnn 533  Q
    ||||||| ||||||| | ||||||||||||||||| ||||||| || |||| |   ||| || ||  |||||| |||||||||||||||| ||||         
T  36007104 tatactccctccgtctcataataactgagtcatttgtaaaaaaatattgtc-caaaaatattgatctatttcacttttcaatacaacatttatta--ttt 36007008  T
Q  534 nnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaa 633  Q
        ||||||||||||||||||||||| ||| || |||   |||||| ||||||||||||||||||||||||||||||||||| || |||||||| ||||    
T  36007007 ttccaattataactctaattaatattattttcaccacttccaattcagtatattctactttacatttatgataaagaagaatgcacaaatacttgacaaa 36006908  T
Q  634 gacactcaaaatcattt 650  Q
    |||||| |||| |||||    
T  36006907 gacacttaaaaccattt 36006891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 501 - 658
Target Start/End: Original strand, 10044629 - 10044785
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| ||||||||||||||||||||||        ||||||||||||||||||||||||||| || ||||| || |||||||| | ||||||||||||    
T  10044629 atttcacttttcaatacaacattaattacttttttt-aattataactctaattaatattactttcacaactctcaaatcaatatactttactttacattt 10044727  T
Q  601 atgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||| ||||||| | |||||||||  ||| ||||||||||  |||| |||||||    
T  10044728 atgataaaaaagaatgcatcaatacttgaaaaatacactcaaaactatttttctctct 10044785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 25111259 - 25111139
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||| | ||||||||| |||||| || |||   |||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  25111259 aattataattttaattaatactactttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagaca 25111160  T
Q  638 ctcaaaatcatttctctctct 658  Q
    |||||||  |||| |||||||    
T  25111159 ctcaaaactatttttctctct 25111139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 25170350 - 25170230
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||| | ||||||||| |||||| || |||   |||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  25170350 aattataattttaattaatactactttcaccacttccaattcaatatattctactttacatttatgataaagaagaatgcagcaatacttgacaaagaca 25170251  T
Q  638 ctcaaaatcatttctctctct 658  Q
    |||||||  |||| |||||||    
T  25170250 ctcaaaactatttttctctct 25170230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 15898188 - 15898308
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||| ||   || ||||    
T  15898188 aattataacactaattaatattactttcaccactctcaattcaatatattctactttgcatttatgataaagaagaatgcatcaatagttaataaggaca 15898287  T
Q  638 ctcaaaatcatttctctctct 658  Q
    || ||| |||||| |||||||    
T  15898288 cttaaactcatttttctctct 15898308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 539 - 658
Target Start/End: Complemental strand, 13087851 - 13087733
Alignment:
Q  539 attataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacac 638  Q
    |||||||  ||||||||||||||||| || ||||| |||||||||||||||||||| |||||||||||||| |||||| ||||||| |||  || |||||    
T  13087851 attataaaactaattaatattactttcaccactctcaattcaatatattctactttgcatttatgataaag-agaatgcaccaatagttgataaggacac 13087753  T
Q  639 tcaaaatcatttctctctct 658  Q
    ||||| |||||| |||||||    
T  13087752 tcaaactcatttttctctct 13087733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 499 - 658
Target Start/End: Original strand, 31090262 - 31090421
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||        ||| ||||| |||||||||| |||||| |  ||||| ||||| |||||||||||||| | |    
T  31090262 tcatttcacttttcaatacaatattaattactttttttcaatcataacactaattaatactactttcaacactctcaattccatatattctactttgcgt 31090361  T
Q  599 ttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    |||||||||||||||||| ||||||| |||  || | ||||||||||||||| |||||||    
T  31090362 ttatgataaagaagaatgcaccaatagttgataagggcactcaaaatcatttttctctct 31090421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 25108570 - 25108690
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||| | ||||||||| |||||| || |||   ||||||||||||| |||||||||||||||||||||||||||| | ||||||||  ||||||||    
T  25108570 aattataattttaattaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagaca 25108669  T
Q  638 ctcaaaatcatttctctctct 658  Q
    |||||||  |||| |||||||    
T  25108670 ctcaaaactatttttctctct 25108690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 538 - 658
Target Start/End: Original strand, 25167662 - 25167782
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||| | ||||||||| |||||| || |||   ||||||||||||| |||||||||||||||||||||||||||| | ||||||||  ||||||||    
T  25167662 aattataattttaattaatactactttcaccacttccaattcaatatattatactttacatttatgataaagaagaatgcagcaatacttaacaaagaca 25167761  T
Q  638 ctcaaaatcatttctctctct 658  Q
    |||||||  |||| |||||||    
T  25167762 ctcaaaactatttttctctct 25167782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 573 - 656
Target Start/End: Complemental strand, 5147572 - 5147489
Alignment:
Q  573 ttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctct 656  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||  || ||||||||||||||||| |||||    
T  5147572 ttaattcaatatattctactttgcatttatgataaagaagaatgcaccaatagttgataaggacactcaaaatcatttttctct 5147489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 539 - 658
Target Start/End: Complemental strand, 13016473 - 13016355
Alignment:
Q  539 attataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacac 638  Q
    |||||||  ||||||||||||||||| || ||||  |||||||||||||||||||| |||||||||||||| |||||| ||||||| |||  || |||||    
T  13016473 attataaaactaattaatattactttcaccactcccaattcaatatattctactttgcatttatgataaag-agaatgcaccaatagttgataaggacac 13016375  T
Q  639 tcaaaatcatttctctctct 658  Q
    ||||| |||||| |||||||    
T  13016374 tcaaactcatttttctctct 13016355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 538 - 608
Target Start/End: Complemental strand, 19889644 - 19889574
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaa 608  Q
    ||||||||||||||||||||||||||| || ||| | ||||||||||||||||||||||||||||||||||    
T  19889644 aattataactctaattaatattactttcaccactttcaattcaatatattctactttacatttatgataaa 19889574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 623
Target Start/End: Original strand, 42818864 - 42818985
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| ||||||||| || |||||||||        |||||||||||||||||||| || ||| || ||||| | ||||||||||||||||||||||||    
T  42818864 atttcacttttcaatataatattaattactttttttcaattataactctaattaatactattttcaccactctca-ttcaatatattctactttacattt 42818962  T
Q  601 atgataaagaagaatgtaccaat 623  Q
    |||||||||||||||| ||||||    
T  42818963 atgataaagaagaatgcaccaat 42818985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 542 - 624
Target Start/End: Original strand, 38978905 - 38978987
Alignment:
Q  542 ataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    |||||||||||||||| |||| | || ||||| |||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  38978905 ataactctaattaatactactatcacaactctcaatttaatatattctactttgcatttatgataaagaggaatgtaccaata 38978987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 575 - 628
Target Start/End: Complemental strand, 4044551 - 4044498
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatacttg 628  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4044551 aattcaatatattctactttacatttatgataaagaagaatgcaccaatacttg 4044498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 538 - 607
Target Start/End: Original strand, 31956727 - 31956796
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||||||||||||||||||||  ||||| || ||||||||||| ||||||||||||||||||    
T  31956727 aattataactctaattaatattacttttatcactctcaactcaatatattcaactttacatttatgataa 31956796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 579 - 644
Target Start/End: Original strand, 35968758 - 35968823
Alignment:
Q  579 caatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||||||| |||||||||||||||    
T  35968758 caatatattctactttatatttataataaagaagaatgtactaatacttgacaaagacactcaaaa 35968823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 575 - 655
Target Start/End: Complemental strand, 16926165 - 16926085
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctc 655  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||  | ||| ||||||||| ||||| ||||    
T  16926165 aattcaatatattctactttccatttatgataaagaagaatgcaccaatacttaacgaaggcactcaaaaccatttttctc 16926085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 433 - 608
Target Start/End: Original strand, 43525372 - 43525545
Alignment:
Q  433 ttatactcgctccgtcccgtaataactgagtcatttataaaaaattactgtcaccgtaatctttattcatttcagttttcaatacaacattaattacnnn 532  Q
    |||||||| ||||||||| ||||||||||  ||||||| |||||| | |||  | | |||||| |  ||||||||||||||||||||||||||||         
T  43525372 ttatactccctccgtcccataataactgatccatttatgaaaaat-attgttccagaaatcttgacacatttcagttttcaatacaacattaattt-ttt 43525469  T
Q  533 nnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaa 608  Q
         |||||||||||||||||||| |||||| || |||   ||||||| ||||| ||||||||||||||||||||    
T  43525470 tttttaattataactctaattaatactactttcaccacttccaattcaacatattatactttacatttatgataaa 43525545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 499 - 644
Target Start/End: Complemental strand, 6629543 - 6629398
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatatt-ctactttaca 597  Q
    |||||||| |||||||||||||| |||||||        ||||||||||||||||||| ||||||| |  ||||  |||| |||||||| | ||||| ||    
T  6629543 tcatttcacttttcaatacaacaataattacttttttctaattataactctaattaattttactttcatcactcccaatttaatatatttccactttgca 6629444  T
Q  598 tttatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    ||||| ||||| ||||||| ||||||||||| | |||||||||||||    
T  6629443 tttataataaaaaagaatgcaccaatacttgac-aagacactcaaaa 6629398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 540 - 650
Target Start/End: Original strand, 33988199 - 33988309
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||| |||||||||| | |||||  |||||||||||||| |||||||||||||||||  | |||||  ||||||||||  |||| |||||    
T  33988199 ttataactctaattcatattactttcattactcccaattcaatatattccactttacatttatgatagtggagaatacaccaatacttaacaaaaacact 33988298  T
Q  640 caaaatcattt 650  Q
     |||| |||||    
T  33988299 taaaaccattt 33988309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 540 - 658
Target Start/End: Complemental strand, 35646198 - 35646080
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| |||||| || |||  ||||||||||||||| ||||| |||||||||||  | |||||| ||||||||||  |||   ||||    
T  35646198 ttataactctaattaatactactttcacaacttctaattcaatatattccactttgcatttatgatagtggagaatgcaccaatacttaacaagatcact 35646099  T
Q  640 caaaatcatttctctctct 658  Q
     |||||||||| |||||||    
T  35646098 taaaatcatttttctctct 35646080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 538 - 607
Target Start/End: Complemental strand, 16884042 - 16883973
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||||||||||| |||||| || || | |||||||||||||| |||||||||||||||||||    
T  16884042 aattataactctaattaatactactttcaccacccctaattcaatatattttactttacatttatgataa 16883973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 547 - 627
Target Start/End: Original strand, 791982 - 792062
Alignment:
Q  547 tctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||| |||||| || |||| ||||||||||||||||| ||| ||||||| ||||||| ||||| ||||||||||    
T  791982 tctaattaatactactttcaccactcataattcaatatattctattttgcatttataataaagaggaatgcaccaatactt 792062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 540 - 616
Target Start/End: Original strand, 20189891 - 20189967
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatg 616  Q
    ||||||||||||||||||||||||| |  | ||| |||||||||||||| |||||||||||||||||| | ||||||    
T  20189891 ttataactctaattaatattactttcatcattctcaattcaatatattccactttacatttatgataatggagaatg 20189967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 538 - 606
Target Start/End: Complemental strand, 39183738 - 39183670
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    ||||||||||||||||||||||||||| |  ||||| |||||||||||||| ||||| |||||||||||    
T  39183738 aattataactctaattaatattactttcatcactctcaattcaatatattccactttgcatttatgata 39183670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 540 - 627
Target Start/End: Complemental strand, 8369805 - 8369718
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| |||||| || ||| | |||||||||||||| ||||| |||||||||||  | |||||| ||||||||||    
T  8369805 ttataactctaattaatactactttcacaactttcaattcaatatattccactttgcatttatgatagtggagaatgcaccaatactt 8369718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 579 - 658
Target Start/End: Complemental strand, 39060492 - 39060413
Alignment:
Q  579 caatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||| |||||||| ||||||||||||||||||||| ||||||||||  ||||  ||||||||| ||||| |||||||    
T  39060492 caatatagtctactttgcatttatgataaagaagaatggaccaatacttaacaaatgcactcaaaaccatttttctctct 39060413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 540 - 658
Target Start/End: Original strand, 6610836 - 6610954
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||| |||||||||||||||| |  ||||  |||||||||||||  |||||||||||||||||  | |||||| ||||||||||   ||| |||||    
T  6610836 ttataactttaattaatattactttcatcactccgaattcaatatatttcactttacatttatgatagtggagaatgcaccaatacttaataaaaacact 6610935  T
Q  640 caaaatcatttctctctct 658  Q
     ||| |||||| |||||||    
T  6610936 taaactcatttttctctct 6610954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 17741284 - 17741160
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaa---tatattctactttacatttatgat-aaagaagaatgtaccaatacttgccaaa 633  Q
    |||||||||| |||||||||||||||| |  ||||| |||||||   |||||| ||||||||||||||||| ||| ||||||| | ||||||||  ||||    
T  17741284 aattataactataattaatattactttcatcactctcaattcaatactatattatactttacatttatgataaaaaaagaatgcatcaatacttaacaaa 17741185  T
Q  634 gacactcaaaatcatttctctctct 658  Q
    | |||||||||  |||| |||||||    
T  17741184 ggcactcaaaactatttttctctct 17741160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 538 - 604
Target Start/End: Original strand, 34534919 - 34534985
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatga 604  Q
    |||||||||||||||||||||||||||||  | ||| ||||||||||||| ||||||| ||||||||    
T  34534919 aattataactctaattaatattacttttatcattctcaattcaatatattatactttatatttatga 34534985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 538 - 628
Target Start/End: Original strand, 35988631 - 35988721
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttg 628  Q
    |||||||||| |||||||||| ||||| || ||||  |||||||||||||| ||||| ||||||||||||  | ||||| |||||||||||    
T  35988631 aattataactttaattaatatcactttcaccactcccaattcaatatattcaactttgcatttatgataagaatgaatgcaccaatacttg 35988721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 650
Target Start/End: Original strand, 15254762 - 15254874
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||||||||||||||||||||| |  ||| | |||||||||||||||| ||| |||| ||||||  | |||||| || ||||| |  |||| |||    
T  15254762 aattataactctaattaatattactttcatcactttcaattcaatatattctaatttgcattaatgatagcggagaatgcactaatacataacaaaaaca 15254861  T
Q  638 ctcaaaatcattt 650  Q
    || ||||||||||    
T  15254862 cttaaaatcattt 15254874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 606
Target Start/End: Original strand, 17699330 - 17699398
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||| ||||||||| |||||| | |||||| ||||||||||||| ||| ||||||||||||||    
T  17699330 aattataactttaattaatactactttcattactctcaattcaatatattataccttacatttatgata 17699398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 539 - 607
Target Start/End: Original strand, 32659814 - 32659882
Alignment:
Q  539 attataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||||| |||||||||||||| | ||| ||||||||||||| |||||| ||||||| ||||    
T  32659814 attataactctaataaatattacttttaccagtctcaattcaatatattatactttgcatttataataa 32659882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 538 - 650
Target Start/End: Complemental strand, 36469205 - 36469093
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    |||||||| ||||||||||| |||||| |  ||| ||||||||||||||| |||||| |||||||||||  | |||||| |||||||| |  |||| |||    
T  36469205 aattataattctaattaatactactttcatcacttttaattcaatatattatactttgcatttatgatagtggagaatgcaccaatacataacaaaaaca 36469106  T
Q  638 ctcaaaatcattt 650  Q
    || | ||||||||    
T  36469105 cttataatcattt 36469093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 500 - 607
Target Start/End: Complemental strand, 72254 - 72147
Alignment:
Q  500 catttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacatt 599  Q
    ||||||| |||||||||||| | |||||||        |||||||| ||||||||||| |||||| |  |||| ||||| ||||||||||||||| ||||    
T  72254 catttcacttttcaatacaataataattactttttcccaattataaatctaattaatactactttcatcactcctaatttaatatattctactttgcatt 72155  T
Q  600 tatgataa 607  Q
    ||||||||    
T  72154 tatgataa 72147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 538 - 624
Target Start/End: Original strand, 7871311 - 7871396
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    ||||||||  |||||||||| |||||| || ||||  |||| |||||||||||||||||||||||||||||||| |||  |||||||    
T  7871311 aattataatactaattaatactactttcaccactcc-aatttaatatattctactttacatttatgataaagaaaaatacaccaata 7871396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 658
Target Start/End: Complemental strand, 11099586 - 11099468
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||||||||||||| |||||| |  ||||  |||||||||||||| |||||  ||||||||||  | |||||| ||||||||||  |||| |||||    
T  11099586 ttataactctaattaatactactttcatcactcccaattcaatatattccactttgtatttatgatagtggagaatgcaccaatacttaacaaaaacact 11099487  T
Q  640 caaaatcatttctctctct 658  Q
     ||||  |||| |||||||    
T  11099486 taaaactatttttctctct 11099468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 17243063 - 17242997
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||| |||||| |  ||||| |||||||||||||| ||||| |||||||||||    
T  17243063 ttataactctaattaatactactttcatcactctcaattcaatatattccactttgcatttatgata 17242997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 607
Target Start/End: Original strand, 5072947 - 5073016
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||||||||||| |||||  | | |||  ||||||||||||| |||||||||||||||||||    
T  5072947 aattataactctaattaatactacttccattgctcccaattcaatatattttactttacatttatgataa 5073016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 550 - 607
Target Start/End: Complemental strand, 7311279 - 7311222
Alignment:
Q  550 aattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    ||||||| ||||||| |  |||||||||||||||||||||||||| ||||||||||||    
T  7311279 aattaatgttactttcatcactcttaattcaatatattctactttgcatttatgataa 7311222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 575 - 644
Target Start/End: Original strand, 16954899 - 16954967
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    |||||||||||||||| ||||||||||||||||| ||||||| ||||||||| |   |||||||||||||    
T  16954899 aattcaatatattctattttacatttatgataaa-aagaatgcaccaatactcgaagaagacactcaaaa 16954967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 538 - 607
Target Start/End: Complemental strand, 39212662 - 39212593
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||||||||||| |||||| |   |||  |||||||||||||||||||| ||||||||||||    
T  39212662 aattataactctaattaatactactttcatcgctcccaattcaatatattctactttgcatttatgataa 39212593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 624
Target Start/End: Original strand, 858334 - 858418
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaata 624  Q
    |||||||||||||||||| |||||| |  ||||| |||| ||||||||  | ||| |||||||||||| | ||||||||||||||    
T  858334 ttataactctaattaatactactttcatcactctcaattaaatatatttcattttgcatttatgataatggagaatgtaccaata 858418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 548 - 608
Target Start/End: Complemental strand, 15564989 - 15564929
Alignment:
Q  548 ctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaa 608  Q
    ||||||||||||||||| |  ||||| |||| ||||||||||||||| |||||||||||||    
T  15564989 ctaattaatattactttcatcactctcaatttaatatattctactttgcatttatgataaa 15564929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 584 - 644
Target Start/End: Complemental strand, 30437804 - 30437744
Alignment:
Q  584 tattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||  |||| ||||||||||    
T  30437804 tattctactttacatttatgataaagaataatggaccaataattaacaaaaacactcaaaa 30437744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 3725185 - 3725272
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||||||| |  ||||  ||||| |||||||| ||| | |||||||||||  | |||||| ||||||||||    
T  3725185 ttataactctaattaatattactttcatcactcacaattcgatatattccactatgcatttatgatagtggagaatgcaccaatactt 3725272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 7613706 - 7613793
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||| ||||||||||||||||||  | |   |||||||||||||  |||||||||||||||||  | |||||| ||||||||||    
T  7613706 ttataactataattaatattacttttatcatttccaattcaatatatttcactttacatttatgatagtggagaatgcaccaatactt 7613793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 497 - 607
Target Start/End: Complemental strand, 14184201 - 14184091
Alignment:
Q  497 attcatttcagttttcaatacaacattaattacnnnnnnnn-aattataactctaattaatattacttttactactcttaattcaatatattctacttta 595  Q
    |||||||||| |||||||||||| |||||||||         |||||||||| |||||||||| | ||| | |||||| ||||||||||||| ||| |||    
T  14184201 attcatttcacttttcaatacaatattaattactttttttccaattataactataattaatatcattttcattactctcaattcaatatattatac-tta 14184103  T
Q  596 catttatgataa 607  Q
    ||||||||||||    
T  14184102 catttatgataa 14184091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 497 - 616
Target Start/End: Complemental strand, 39036007 - 39035888
Alignment:
Q  497 attcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttac 596  Q
    |||||||||| |||||||||||| |||||||||        | ||||||| |||||||| | ||||||||| ||||| |||| ||||||||  |||||      
T  39036007 attcatttcacttttcaatacaatattaattacctttttctacttataacactaattaaaactacttttaccactctcaatttaatatatttcactttgt 39035908  T
Q  597 atttatgataaagaagaatg 616  Q
    | |||||||||||| |||||    
T  39035907 agttatgataaagaggaatg 39035888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 549 - 607
Target Start/End: Complemental strand, 25344838 - 25344780
Alignment:
Q  549 taattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    ||||||||| |||||| |  | ||| |||||||||||||||||||||||||||||||||    
T  25344838 taattaatactactttcatcattctcaattcaatatattctactttacatttatgataa 25344780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 606
Target Start/End: Complemental strand, 35334635 - 35334569
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||||| |||||| |  ||||  |||||||||||||| ||||| |||||||||||    
T  35334635 ttataactctaattaatactactttcatcactcccaattcaatatattccactttgcatttatgata 35334569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 658
Target Start/End: Complemental strand, 42575747 - 42575629
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||| ||||||||| |||||| || |||   |||||||||||||| ||||| |||||||||||  | |||||  |||||||||| ||||   ||||    
T  42575747 ttataactttaattaatactactttcacaacttccaattcaatatattccactttgcatttatgatagtggagaatacaccaatacttaccaagagcact 42575648  T
Q  640 caaaatcatttctctctct 658  Q
     |||| ||||| |||||||    
T  42575647 taaaaccatttttctctct 42575629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 538 - 607
Target Start/End: Complemental strand, 6173091 - 6173022
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||| ||||||||| |||||| |  ||||  ||||||||||||| |||||| ||||||||||||    
T  6173091 aattataactataattaatactactttcatcactcacaattcaatatattatactttgcatttatgataa 6173022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 627
Target Start/End: Complemental strand, 8692968 - 8692840
Alignment:
Q  499 tcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacat 598  Q
    |||||||| |||||||||||| |||||||||          ||||||||||||||||||||||||| || |||   |||| ||||||||  | ||| |||    
T  8692968 tcatttcatttttcaatacaatattaattactttttttcctttataactctaattaatattactttcacaacttccaatttaatatatttcattttgcat 8692869  T
Q  599 ttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||  | |||||| ||||||||||    
T  8692868 ttatgatagtggagaatgcaccaatactt 8692840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 538 - 606
Target Start/End: Complemental strand, 16283698 - 16283630
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||||||||||| ||  |||||| |  ||||| |||||||||||||| ||||| |||||||||||    
T  16283698 aattataactctaattgatgctactttcatcactctcaattcaatatattccactttgcatttatgata 16283630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 41184116 - 41184203
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||||||||| |  | ||| |||| ||| ||||| |||||| || |||||||| | ||||||  |||||||||    
T  41184116 ttataactctaattaatattactttcatcattctcaatttaatttattccactttaaatctatgataatggagaatgccccaatactt 41184203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 584 - 658
Target Start/End: Original strand, 4194975 - 4195049
Alignment:
Q  584 tattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||||||||| ||||||||||||||||||||| | ||||| ||   || | ||||||||| ||||| |||||||    
T  4194975 tattctacttttcatttatgataaagaagaatgcatcaatagttcataagggcactcaaaaccatttttctctct 4195049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 627
Target Start/End: Complemental strand, 6735465 - 6735379
Alignment:
Q  541 tataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||||||||| |  |||   |||| ||||||||| ||||| |||||||||||  | |||||| || |||||||    
T  6735465 tataactctaattaatattactttcatcacttcaaatttaatatattccactttgcatttatgatagtggagaatgcacaaatactt 6735379  T

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Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 540 - 606
Target Start/End: Original strand, 13135752 - 13135818
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgata 606  Q
    |||||||| |||||| || |||||| |  |||| ||||||||||||||| ||||| |||||||||||    
T  13135752 ttataactttaattactactactttcatcactcctaattcaatatattccactttgcatttatgata 13135818  T

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Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 587
Target Start/End: Complemental strand, 13422503 - 13422414
Alignment:
Q  497 attcatttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatatt 587  Q
    |||||||||| |||||||||||| ||||||||         |||||||||| |||||||||||||||| |  ||||| |||||||||||||    
T  13422503 attcatttcacttttcaatacaatattaatta-ttatttttaattataactataattaatattactttcatcactctcaattcaatatatt 13422414  T

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Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 552 - 601
Target Start/End: Complemental strand, 146797 - 146748
Alignment:
Q  552 ttaatattacttttactactcttaattcaatatattctactttacattta 601  Q
    |||||| ||||||||  ||||| |||||||||||||||||||| ||||||    
T  146797 ttaatactacttttatcactctcaattcaatatattctactttgcattta 146748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 546 - 627
Target Start/End: Complemental strand, 6239199 - 6239118
Alignment:
Q  546 ctctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    ||||||||||||||||||  |  ||| |||||| ||||| |||| ||||||||||||  ||| || |||| |||||||||||    
T  6239199 ctctaattaatattacttgcatcacttttaatttaatattttctcctttacatttattgtaaggatgaatataccaatactt 6239118  T

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Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 559 - 644
Target Start/End: Original strand, 31196337 - 31196422
Alignment:
Q  559 tacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaa 644  Q
    |||||| || ||||| ||| |||||||||||||||| ||| ||| |||||||| |||| | |||||  || ||| |||||||||||    
T  31196337 tactttcaccactctcaatccaatatattctactttgcatgtataataaagaaaaatgcagcaataaatgacaaggacactcaaaa 31196422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 542 - 607
Target Start/End: Complemental strand, 42158753 - 42158688
Alignment:
Q  542 ataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    ||||||||||||||||||||||| |    ||| ||||||| ||||| |||||| ||||||||||||    
T  42158753 ataactctaattaatattactttcatctttctcaattcaacatattttactttgcatttatgataa 42158688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 583 - 658
Target Start/End: Original strand, 20364580 - 20364656
Alignment:
Q  583 atattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatt-tctctctct 658  Q
    |||||||||||||||||||| |||||||| | || || |||||||| | ||  ||||||||| |||| |||||||||    
T  20364580 atattctactttacatttataataaagaatagtgcactaatacttgactaaagcactcaaaaccattctctctctct 20364656  T

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Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 575 - 607
Target Start/End: Original strand, 22398313 - 22398345
Alignment:
Q  575 aattcaatatattctactttacatttatgataa 607  Q
    ||||||||||||||| |||||||||||||||||    
T  22398313 aattcaatatattctgctttacatttatgataa 22398345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 575 - 627
Target Start/End: Original strand, 25814398 - 25814450
Alignment:
Q  575 aattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||  |||||||||||||||||  | | |||||||||||||||    
T  25814398 aattcaatatatttcactttacatttatgatagtggataatgtaccaatactt 25814450  T

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Target: scaffold0262 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 539 - 649
Target Start/End: Complemental strand, 12545 - 12435
Alignment:
Q  539 attataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacac 638  Q
    ||||||||||||||||||| |||||| || | |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||| |||||||||    
T  12545 attataactctaattaatactactttcaccattcttaattcaatatattctactttacatttataataaagaagaatgcactaatacttgacaaagacac 12446  T
Q  639 tcaaaatcatt 649  Q
    |||||| ||||    
T  12445 tcaaaaccatt 12435  T

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Target: scaffold0086 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 540 - 658
Target Start/End: Original strand, 5817 - 5935
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacact 639  Q
    |||||||| ||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||  |||| | |||||||||  |||||||||    
T  5817 ttataactttaattaatactactttcaccactctcaattcaatatattctactttacatttatgataaagagcaatgcatcaatacttgataaagacact 5916  T
Q  640 caaaatcatttctctctct 658  Q
    ||| ||||||| |||||||    
T  5917 caagatcatttttctctct 5935  T

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Target: scaffold0221 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 538 - 658
Target Start/End: Complemental strand, 10901 - 10781
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagaca 637  Q
    ||||||||  |||||||||| |||||| || |||| |||||||||||||| |||||| ||||||||||||||||||||| ||||||| |||  || ||||    
T  10901 aattataaaactaattaatactactttcaccactcctaattcaatatattttactttgcatttatgataaagaagaatgaaccaatagttgataaggaca 10802  T
Q  638 ctcaaaatcatttctctctct 658  Q
    ||||||  ||||| |||||||    
T  10801 ctcaaacccatttttctctct 10781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 540 - 625
Target Start/End: Original strand, 8886 - 8971
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatac 625  Q
    ||||||||||||||||||||||||| |  | ||| |||||||||||||| ||||| ||||||| |||  | |||||| ||||||||    
T  8886 ttataactctaattaatattactttcatcattctcaattcaatatattccactttgcatttataatagtggagaatgcaccaatac 8971  T

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Target: scaffold0155 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 501 - 624
Target Start/End: Complemental strand, 8101 - 7978
Alignment:
Q  501 atttcagttttcaatacaacattaattacnnnnnnnnaattataactctaattaatattacttttactactcttaattcaatatattctactttacattt 600  Q
    |||||| |||||||||||| || ||||||        |||||||||| ||||||||| |||||| || | ||| ||||||||||||| ||||||||||||    
T  8101 atttcacttttcaatacaatatcaattactttttcccaattataactttaattaatactactttcacaattctcaattcaatatattttactttacattt 8002  T
Q  601 atgataaagaagaatgtaccaata 624  Q
    ||||||||||  |||| |||||||    
T  8001 atgataaagagaaatgcaccaata 7978  T

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Target: scaffold0020 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 538 - 607
Target Start/End: Original strand, 171223 - 171292
Alignment:
Q  538 aattataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataa 607  Q
    |||||||||||  |||||||||||||| |  |||| ||||||||||||||||||||||||||||||||||    
T  171223 aattataactcatattaatattactttcatcactcctaattcaatatattctactttacatttatgataa 171292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 557 - 658
Target Start/End: Original strand, 220009 - 220110
Alignment:
Q  557 attacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctct 656  Q
    |||||||| || ||||| |||||||||||||||| ||| |||||||||||||||||| || |  |||| |||  || ||||||||||| ||| |||||||    
T  220009 attactttcaccactctcaattcaatatattctattttgcatttatgataaagaagattgcataaatagttgataaggacactcaaaaccatctctctct 220108  T
Q  657 ct 658  Q
    ||    
T  220109 ct 220110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 229822 - 229909
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| |||||| || |||   |||||||||||| | ||||| |||||||||||| | |||||| ||||||||||    
T  229822 ttataactctaattaatactactttcacaacttccaattcaatatataccactttgcatttatgataatggagaatgcaccaatactt 229909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 394777 - 394864
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||||||||||||||| |||||| |  ||||| |||||| ||||||| |||||  |||||||||| ||||||||  ||||||||||    
T  394777 ttataactctaattaatactactttcatcactctcaattcactatattccactttgtatttatgatagagaagaatagaccaatactt 394864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 569 - 658
Target Start/End: Original strand, 593 - 681
Alignment:
Q  569 actcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatacttgccaaagacactcaaaatcatttctctctct 658  Q
    ||||| |||||| |||||||||||||  |||||||||||||||||||| ||||||| |||   ||||||||||||| || || |||||||    
T  593 actctcaattcattatattctactttggatttatgataaagaagaatgcaccaatagttg-ataagacactcaaaaccaattttctctct 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 620
Target Start/End: Original strand, 230255 - 230335
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtacc 620  Q
    ||||||||||||||||||||||||| || |||   |||||||||||||| | ||| ||||||||||||   ||||||||||    
T  230255 ttataactctaattaatattactttcacaacttccaattcaatatattccattttgcatttatgataacagagaatgtacc 230335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 540 - 602
Target Start/End: Original strand, 98824 - 98886
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttat 602  Q
    ||||||||||||||||||||| ||| |  ||||| |||||||||||||| |||||| ||||||    
T  98824 ttataactctaattaatattattttcatcactctcaattcaatatattccactttatatttat 98886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 604
Target Start/End: Original strand, 14455 - 14519
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatga 604  Q
    |||||||||||||||||| |||||| |  | | | |||||||||||||| |||||||||||||||    
T  14455 ttataactctaattaatactactttcatcattttcaattcaatatattccactttacatttatga 14519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 627
Target Start/End: Original strand, 26612 - 26699
Alignment:
Q  540 ttataactctaattaatattacttttactactcttaattcaatatattctactttacatttatgataaagaagaatgtaccaatactt 627  Q
    |||||| ||||||||||| |||||| |  ||||  |||||||||||||| ||||| |||||||||||  | |||||  ||||||||||    
T  26612 ttataattctaattaatactactttcatcactcgcaattcaatatattccactttgcatttatgatagtggagaatagaccaatactt 26699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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