View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3687_high_56 (Length: 249)

Name: NF3687_high_56
Description: NF3687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3687_high_56
NF3687_high_56
[»] chr1 (22 HSPs)
chr1 (151-234)||(19711669-19711747)
chr1 (1-61)||(19711839-19711899)
chr1 (12-59)||(28030830-28030877)
chr1 (14-60)||(22575735-22575781)
chr1 (6-60)||(30385293-30385347)
chr1 (12-60)||(38153425-38153473)
chr1 (6-60)||(6766432-6766486)
chr1 (6-60)||(11641215-11641269)
chr1 (6-60)||(36757634-36757688)
chr1 (14-60)||(44647861-44647907)
chr1 (12-60)||(6402558-6402606)
chr1 (12-60)||(31444989-31445037)
chr1 (14-57)||(3485358-3485401)
chr1 (15-58)||(34634976-34635019)
chr1 (14-60)||(9342793-9342839)
chr1 (6-60)||(16120588-16120642)
chr1 (6-60)||(30003593-30003647)
chr1 (6-60)||(40771920-40771974)
chr1 (6-60)||(40977636-40977690)
chr1 (18-60)||(42735313-42735355)
chr1 (8-60)||(9881338-9881390)
chr1 (14-58)||(48375070-48375114)
[»] chr7 (28 HSPs)
chr7 (6-60)||(4131651-4131705)
chr7 (6-59)||(37467456-37467509)
chr7 (6-60)||(27045556-27045610)
chr7 (6-60)||(20885163-20885217)
chr7 (6-60)||(28061663-28061717)
chr7 (6-60)||(36623368-36623422)
chr7 (6-60)||(40090066-40090120)
chr7 (6-60)||(46103518-46103572)
chr7 (6-60)||(47156087-47156141)
chr7 (6-60)||(48602496-48602550)
chr7 (6-59)||(38851996-38852049)
chr7 (7-60)||(39130074-39130127)
chr7 (12-60)||(6766698-6766746)
chr7 (8-60)||(36341682-36341734)
chr7 (12-60)||(42890491-42890539)
chr7 (6-45)||(3785580-3785619)
chr7 (6-45)||(38767222-38767261)
chr7 (15-57)||(4048885-4048927)
chr7 (6-60)||(7457870-7457924)
chr7 (6-60)||(16778565-16778619)
chr7 (6-60)||(36515899-36515953)
chr7 (6-60)||(40256117-40256171)
chr7 (14-60)||(41898056-41898102)
chr7 (15-60)||(5529080-5529125)
chr7 (18-59)||(47525985-47526026)
chr7 (12-60)||(6174902-6174950)
chr7 (12-60)||(7438969-7439017)
chr7 (8-60)||(44594668-44594719)
[»] chr5 (22 HSPs)
chr5 (6-60)||(18998747-18998801)
chr5 (6-59)||(27579579-27579632)
chr5 (14-60)||(32017281-32017327)
chr5 (7-60)||(38916398-38916451)
chr5 (6-60)||(978137-978191)
chr5 (18-60)||(3422358-3422400)
chr5 (6-60)||(9502775-9502829)
chr5 (6-60)||(11761126-11761180)
chr5 (6-60)||(12456788-12456842)
chr5 (14-60)||(26387027-26387073)
chr5 (6-60)||(30355022-30355076)
chr5 (6-60)||(17476936-17476991)
chr5 (6-60)||(3472425-3472479)
chr5 (14-52)||(4671277-4671315)
chr5 (6-60)||(14634305-14634359)
chr5 (6-60)||(24992286-24992340)
chr5 (18-60)||(32400399-32400441)
chr5 (6-60)||(33387280-33387334)
chr5 (6-60)||(33587617-33587671)
chr5 (18-59)||(12359970-12360011)
chr5 (19-56)||(39776703-39776740)
chr5 (8-56)||(6996042-6996090)
[»] chr3 (26 HSPs)
chr3 (6-60)||(41252911-41252965)
chr3 (6-60)||(44856406-44856460)
chr3 (7-60)||(15332954-15333007)
chr3 (6-60)||(6910394-6910448)
chr3 (6-60)||(13499483-13499537)
chr3 (6-60)||(27334879-27334933)
chr3 (6-60)||(30057359-30057413)
chr3 (6-60)||(33415859-33415913)
chr3 (6-60)||(39866289-39866343)
chr3 (6-60)||(42490344-42490398)
chr3 (6-60)||(42761631-42761685)
chr3 (6-60)||(44561844-44561898)
chr3 (15-59)||(17643800-17643844)
chr3 (12-60)||(30213870-30213918)
chr3 (12-60)||(38137890-38137938)
chr3 (6-60)||(47164600-47164655)
chr3 (6-60)||(27010622-27010676)
chr3 (14-52)||(41751566-41751604)
chr3 (6-60)||(48334669-48334722)
chr3 (12-57)||(3017857-3017902)
chr3 (14-59)||(15568084-15568129)
chr3 (8-49)||(49404805-49404846)
chr3 (12-60)||(21797622-21797670)
chr3 (16-60)||(23940510-23940554)
chr3 (12-60)||(25527470-25527518)
chr3 (15-51)||(27813445-27813481)
[»] scaffold0595 (1 HSPs)
scaffold0595 (6-59)||(4008-4061)
[»] chr4 (31 HSPs)
chr4 (12-60)||(7614681-7614729)
chr4 (6-60)||(2760875-2760929)
chr4 (15-59)||(2571031-2571075)
chr4 (6-60)||(26125768-26125822)
chr4 (6-60)||(29830403-29830457)
chr4 (6-60)||(35381042-35381096)
chr4 (6-60)||(38416798-38416852)
chr4 (14-60)||(38721405-38721451)
chr4 (6-60)||(43967783-43967837)
chr4 (6-60)||(44232225-44232279)
chr4 (6-60)||(47386434-47386488)
chr4 (6-60)||(54330838-54330892)
chr4 (6-60)||(55209722-55209776)
chr4 (6-60)||(10550484-10550540)
chr4 (6-59)||(19903799-19903852)
chr4 (6-57)||(29051744-29051793)
chr4 (12-44)||(34652211-34652243)
chr4 (6-45)||(25633256-25633295)
chr4 (6-56)||(3037040-3037090)
chr4 (6-60)||(12240326-12240380)
chr4 (6-60)||(12625311-12625365)
chr4 (6-60)||(14144605-14144659)
chr4 (6-60)||(17610340-17610394)
chr4 (6-60)||(25296728-25296782)
chr4 (6-60)||(26170046-26170100)
chr4 (6-60)||(36523116-36523170)
chr4 (6-60)||(38716946-38717000)
chr4 (14-60)||(45291900-45291946)
chr4 (14-60)||(55091335-55091381)
chr4 (6-59)||(50181120-50181173)
chr4 (12-52)||(56297858-56297898)
[»] chr2 (22 HSPs)
chr2 (7-59)||(43444689-43444741)
chr2 (6-60)||(6223126-6223180)
chr2 (6-60)||(11931751-11931805)
chr2 (6-59)||(19262740-19262793)
chr2 (12-56)||(24252026-24252070)
chr2 (12-60)||(38839139-38839187)
chr2 (6-57)||(16865114-16865165)
chr2 (6-60)||(5405056-5405110)
chr2 (6-60)||(7608109-7608163)
chr2 (6-60)||(7799907-7799961)
chr2 (6-60)||(8042170-8042224)
chr2 (6-60)||(9172294-9172348)
chr2 (6-60)||(19141214-19141268)
chr2 (6-60)||(38292012-38292066)
chr2 (14-60)||(42133820-42133866)
chr2 (6-53)||(9006939-9006986)
chr2 (6-60)||(24093684-24093738)
chr2 (6-60)||(11841741-11841795)
chr2 (12-58)||(31610803-31610849)
chr2 (6-60)||(39358206-39358260)
chr2 (6-60)||(44365217-44365271)
chr2 (6-59)||(13125294-13125347)
[»] scaffold0225 (1 HSPs)
scaffold0225 (6-60)||(8981-9035)
[»] scaffold0029 (1 HSPs)
scaffold0029 (6-60)||(138178-138232)
[»] chr8 (18 HSPs)
chr8 (6-60)||(38957230-38957284)
chr8 (6-60)||(616843-616897)
chr8 (6-60)||(623236-623290)
chr8 (14-60)||(9632223-9632269)
chr8 (6-60)||(14237340-14237394)
chr8 (6-60)||(18044485-18044539)
chr8 (6-60)||(32998510-32998564)
chr8 (6-60)||(33700221-33700275)
chr8 (6-60)||(40494444-40494498)
chr8 (6-60)||(41263870-41263924)
chr8 (6-59)||(5878376-5878429)
chr8 (12-60)||(18035166-18035214)
chr8 (16-60)||(40716671-40716715)
chr8 (14-60)||(132085-132131)
chr8 (6-60)||(3100643-3100697)
chr8 (14-60)||(18090396-18090442)
chr8 (6-60)||(42587396-42587450)
chr8 (6-59)||(3370405-3370458)
[»] chr6 (24 HSPs)
chr6 (6-60)||(31869768-31869822)
chr6 (12-60)||(8101666-8101714)
chr6 (6-60)||(3623858-3623911)
chr6 (6-60)||(4440910-4440964)
chr6 (6-60)||(6563286-6563340)
chr6 (6-56)||(15337548-15337598)
chr6 (6-60)||(15383078-15383132)
chr6 (6-60)||(23158057-23158111)
chr6 (6-60)||(24624089-24624143)
chr6 (6-60)||(32414827-32414881)
chr6 (6-59)||(1260490-1260543)
chr6 (18-59)||(5495321-5495362)
chr6 (23-60)||(17155226-17155263)
chr6 (7-60)||(18668836-18668889)
chr6 (12-56)||(10298725-10298769)
chr6 (6-60)||(4147991-4148045)
chr6 (6-60)||(19088106-19088160)
chr6 (6-60)||(22054832-22054886)
chr6 (7-57)||(28477814-28477864)
chr6 (7-57)||(29693944-29693994)
chr6 (12-57)||(29790272-29790317)
chr6 (12-44)||(19240756-19240788)
chr6 (6-58)||(20226448-20226500)
chr6 (6-58)||(22120432-22120484)
[»] scaffold0262 (1 HSPs)
scaffold0262 (12-60)||(22846-22894)
[»] scaffold0099 (1 HSPs)
scaffold0099 (6-60)||(28800-28854)
[»] scaffold0608 (1 HSPs)
scaffold0608 (6-59)||(1580-1633)
[»] scaffold0003 (1 HSPs)
scaffold0003 (12-60)||(161985-162033)


Alignment Details
Target: chr1 (Bit Score: 56; Significance: 3e-23; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 19711747 - 19711669
Alignment:
Q  151 gcattgacgatgtgtattttgaactgttaaatctgtgtgatagaggaagtgtttttcagtttcattgcttccatctttatttta 234  Q
    |||||||||| ||||||||||||| |||||||||||||||||     |||||||||||||||||||||||||||||||||||||    
T  19711747 gcattgacgacgtgtattttgaacggttaaatctgtgtgata-----agtgtttttcagtttcattgcttccatctttatttta 19711669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19711899 - 19711839
Alignment:
Q  1 acgtgactttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatgc 61  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  19711899 acgtgactttaactatattttttaactaacatataaatacaagtgatagcatgtaagatgc 19711839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 28030877 - 28030830
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  28030877 accatactttttaactaacatataaatacaaatgttagcatgtaagat 28030830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 22575781 - 22575735
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  22575781 catattttttaactaatatataaatacaaatgttagcatgtaagatg 22575735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 30385347 - 30385293
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  30385347 actttgaccatattttttaactaatatataaatacaaatgttagtatgtaagatg 30385293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 38153473 - 38153425
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||| ||||||||||||||||||||||||||| || |||||||||||    
T  38153473 accatactttttaactaacatataaatacaaatgttatcatgtaagatg 38153425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 6766432 - 6766486
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  6766432 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 6766486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 11641269 - 11641215
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  11641269 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 11641215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 36757688 - 36757634
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  36757688 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 36757634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 44647907 - 44647861
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||||| || ||||||||||||||| ||||||||||||||    
T  44647907 catattttttaacaaatatataaatacaaatgttagcatgtaagatg 44647861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 6402606 - 6402558
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  6402606 accatactttttaactaatatataaatacaaatattagcatgtaagatg 6402558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 31444989 - 31445037
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||||| ||||||| ||||||| | ||||||||||||    
T  31444989 accatattttttaactaatatataaacacaaatgtttgcatgtaagatg 31445037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 3485401 - 3485358
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaag 57  Q
    |||||||||||||||| ||||||||||||||| || ||||||||    
T  3485401 catattttttaactaatatataaatacaaatgttatcatgtaag 3485358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 34634976 - 34635019
Alignment:
Q  15 atattttttaactaacatataaatacaaatgatagcatgtaaga 58  Q
    ||||||||||||||| ||||||||||||||| || |||||||||    
T  34634976 atattttttaactaatatataaatacaaatgttaacatgtaaga 34635019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 9342839 - 9342793
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||||||||  |||||||||||||  ||||||||||||||    
T  9342839 catattttttaactaatgtataaatacaaatattagcatgtaagatg 9342793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 16120642 - 16120588
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  16120642 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 16120588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 30003593 - 30003647
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  30003593 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 30003647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 40771974 - 40771920
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  40771974 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 40771920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 40977690 - 40977636
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  40977690 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 40977636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 42735355 - 42735313
Alignment:
Q  18 ttttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||| ||||||||||||||  ||||||||||||||    
T  42735355 ttttttaactaatatataaatacaaatattagcatgtaagatg 42735313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 9881338 - 9881390
Alignment:
Q  8 tttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||| ||||||||||| ||||| ||| ||||| || |||||||||||    
T  9881338 tttaaccataatttttaactaatatatacatataaatgttatcatgtaagatg 9881390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 48375070 - 48375114
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaaga 58  Q
    ||||||||||||||||  |||||||||||||  ||||||||||||    
T  48375070 catattttttaactaatttataaatacaaatattagcatgtaaga 48375114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 4131705 - 4131651
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  4131705 actttaaccatattttttaactaatatataaatacaaaagttagcatgtaagatg 4131651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 37467509 - 37467456
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  37467509 actttaaccatattttttaactaatatataaatacaaatgttagcatttaagat 37467456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 27045610 - 27045556
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  27045610 actttgaccatattttttaactaatatataaatacaaatgttagcatataagatg 27045556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 20885163 - 20885217
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  20885163 actttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatg 20885217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 28061717 - 28061663
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  28061717 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 28061663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 36623368 - 36623422
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  36623368 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 36623422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 40090120 - 40090066
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  40090120 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 40090066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 46103572 - 46103518
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  46103572 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 46103518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 47156087 - 47156141
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  47156087 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 47156141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 48602496 - 48602550
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  48602496 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 48602550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 38852049 - 38851996
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    ||||| |||||| ||||||||||| ||||||||||||||  |||||||||||||    
T  38852049 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagat 38851996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 39130127 - 39130074
Alignment:
Q  7 ctttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||| ||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  39130127 ctttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatg 39130074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 6766746 - 6766698
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||||||||||  ||||||| |||||| ||||||||||||||    
T  6766746 accatattttttaactaatgtataaatgcaaatgttagcatgtaagatg 6766698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 36341682 - 36341734
Alignment:
Q  8 tttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||| ||| ||||||||||||||||||||| ||||| ||| ||||||||||    
T  36341682 tttaacgatactttttaactaacatataaatataaatgttagaatgtaagatg 36341734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 42890539 - 42890491
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  42890539 accatactttttaactaatatataaatacaaatattagcatgtaagatg 42890491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 3785580 - 3785619
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatg 45  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  3785580 actttgaccatattttttaactaatatataaatacaaatg 3785619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 38767261 - 38767222
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatg 45  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  38767261 actttgaccatattttttaactaatatataaatacaaatg 38767222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 4048927 - 4048885
Alignment:
Q  15 atattttttaactaacatataaatacaaatgatagcatgtaag 57  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||    
T  4048927 atattttttaactaatatataaatacaaatgctagcttgtaag 4048885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 7457924 - 7457870
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  7457924 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 7457870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 16778565 - 16778619
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  16778565 actttgaccataatttttaactaatgtataaatacaaatattagcatgtaagatg 16778619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 36515899 - 36515953
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||||||||||||  || ||||||||||||||| ||| || |||||||    
T  36515899 actttaaccatattttttaatcaatatataaatacaaatgttagtatataagatg 36515953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 40256117 - 40256171
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  40256117 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 40256171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 41898056 - 41898102
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  41898056 catactttttaactaatatataaatacaaatattagcatgtaagatg 41898102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 5529080 - 5529125
Alignment:
Q  15 atattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||||||| ||| ||||| ||||| ||||||||||||||    
T  5529080 atattttttaactaatatacaaataaaaatgttagcatgtaagatg 5529125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 47526026 - 47525985
Alignment:
Q  18 ttttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    |||||||||||| ||||||||||||||| |||||| ||||||    
T  47526026 ttttttaactaatatataaatacaaatgttagcatttaagat 47525985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 6174902 - 6174950
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||||||||||  ||||||||||||   ||||||||||||||    
T  6174902 accatattttttaactaatgtataaatacaaacattagcatgtaagatg 6174950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 7438969 - 7439017
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  7438969 accatactttttaactaatgtataaatacaaatattagcatgtaagatg 7439017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 44594719 - 44594668
Alignment:
Q  8 tttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||||||||||||| |||||||||| |||| |||||| |||||||    
T  44594719 tttaatcatattttttaactaatatataaatac-aatgttagcatataagatg 44594668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 18998747 - 18998801
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  18998747 actttaaccatattttttaactaatatataaatacaaatgttagtatgtaagatg 18998801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 27579632 - 27579579
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||    
T  27579632 actttaactatattttttaactaatatataaatacaaatgttagcatgtaagat 27579579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 32017281 - 32017327
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  32017281 catattttttaactaatatataaatacaaatgttagcatgtaagatg 32017327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 38916451 - 38916398
Alignment:
Q  7 ctttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||| |||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  38916451 ctttgaccatactttttaactaacatataaatacaaatgttagcatgtgagatg 38916398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 978137 - 978191
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  978137 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 978191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 3422400 - 3422358
Alignment:
Q  18 ttttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  3422400 ttttttaactaatatataaatacaaatgttagcatgtaagatg 3422358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 9502829 - 9502775
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  9502829 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 9502775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 11761126 - 11761180
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||||||||||||||| ||||||||||||||  || |||||||||||    
T  11761126 actttgaccatattttttaactaatatataaatacaaatattaacatgtaagatg 11761180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 12456842 - 12456788
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||| |||||||||||||||| ||| ||||||||||| ||| ||||||||||    
T  12456842 actttaatcatattttttaactaatatacaaatacaaatgttagtatgtaagatg 12456788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 26387073 - 26387027
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||||||||||||| ||||| |||||| |||||||    
T  26387073 catattttttaactaacatataaatataaatgttagcatttaagatg 26387027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 30355076 - 30355022
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||||  |||||||||| ||||||||||||||  ||||||||||||||    
T  30355076 actttaaccatacattttaactaatatataaatacaaatattagcatgtaagatg 30355022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 17476936 - 17476991
Alignment:
Q  6 actttaaccatatttt-ttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||| || |||||||    
T  17476936 actttaaccatatttttttaactaatatataaatacaaatgttagtatataagatg 17476991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 3472479 - 3472425
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||||||||   ||||||||||||  ||||||||||||||    
T  3472479 actttgaccatattttttaactaatgaataaatacaaatattagcatgtaagatg 3472425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 4671277 - 4671315
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcat 52  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  4671277 catattttttaactgatatataaatacaaatgatagcat 4671315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 14634359 - 14634305
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| || ||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  14634359 actttgactatactttttaactaatatataaatacaaatattagcatgtaagatg 14634305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 24992340 - 24992286
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||||||||  |||||||||||||  |||||| |||||||    
T  24992340 actttgaccatattttttaactaatttataaatacaaatattagcatataagatg 24992286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 32400399 - 32400441
Alignment:
Q  18 ttttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||| ||||||||||||||  ||||||||||||||    
T  32400399 ttttttaactaatatataaatacaaatattagcatgtaagatg 32400441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 33387280 - 33387334
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| || ||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  33387280 actttgactatactttttaactaatatataaatacaaatattagcatgtaagatg 33387334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 33587671 - 33587617
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||||||||  |||||||||||||  || |||||||||||    
T  33587671 actttgaccatattttttaactaatctataaatacaaatattaacatgtaagatg 33587617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 12360011 - 12359970
Alignment:
Q  18 ttttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    |||||||||||| ||||||||||||||| ||||||| |||||    
T  12360011 ttttttaactaatatataaatacaaatgttagcatgaaagat 12359970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 39776703 - 39776740
Alignment:
Q  19 tttttaactaacatataaatacaaatgatagcatgtaa 56  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  39776703 tttttaactaacatataaatacaaatattagcatgtaa 39776740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 6996042 - 6996090
Alignment:
Q  8 tttaaccatattttttaactaacatataaatacaaatgatagcatgtaa 56  Q
    |||||| ||||||||||||||| ||||||||| ||||| || |||||||    
T  6996042 tttaactatattttttaactaatatataaatataaatgttaccatgtaa 6996090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 41252965 - 41252911
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  41252965 actttaaccatattttttaactaatatataaatacaaatgttagcatataagatg 41252911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 44856406 - 44856460
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||    
T  44856406 actttaactatactttttaactaacatataaatacaaatgttagtatgtaagatg 44856460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 15333007 - 15332954
Alignment:
Q  7 ctttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||| |||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  15333007 ctttgaccaaattttttaactaatatataaatacaaatgttagcatgtaagatg 15332954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 6910394 - 6910448
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||||||||||||||||  |||||||||||||  || |||||||||||    
T  6910394 actttaaccatattttttaactaatgtataaatacaaatattaacatgtaagatg 6910448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 13499537 - 13499483
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  13499537 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 13499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 27334933 - 27334879
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  27334933 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 27334879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 30057359 - 30057413
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||||||||||| |||||||  |||||| |||||| |||||||    
T  30057359 actttaaccatattttttaactaatatataaaagcaaatgttagcatataagatg 30057413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 33415859 - 33415913
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  33415859 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 33415913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 39866343 - 39866289
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  39866343 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 39866289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 42490398 - 42490344
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  42490398 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 42490344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 42761685 - 42761631
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  42761685 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 42761631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 44561844 - 44561898
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||||||||||||||||||| |  |||||||||||    
T  44561844 actttgaccatactttttaactaacatataaatacaaatgttgacatgtaagatg 44561898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 17643800 - 17643844
Alignment:
Q  15 atattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    ||||||||||||||| || |||||||||||| |||||||||||||    
T  17643800 atattttttaactaatatgtaaatacaaatgttagcatgtaagat 17643844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 30213870 - 30213918
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  30213870 accatactttttaactaatatataaatacaaatattagcatgtaagatg 30213918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 38137890 - 38137938
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  38137890 accatattttttaactaatgtataaatacaaatattagcatgtaagatg 38137938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 47164655 - 47164600
Alignment:
Q  6 actttaaccatattttttaactaacatat-aaatacaaatgatagcatgtaagatg 60  Q
    ||||||| |||||||||||||||| |||| ||||||||||| ||| ||||||||||    
T  47164655 actttaatcatattttttaactaatatataaaatacaaatgttagtatgtaagatg 47164600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 27010676 - 27010622
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||| | ||||||||||| ||||||||||||||  ||||||||||||||    
T  27010676 actttgaccaaactttttaactaatatataaatacaaatattagcatgtaagatg 27010622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 41751604 - 41751566
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcat 52  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  41751604 catattttttaactaatatataaatacaaatgttagcat 41751566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 48334722 - 48334669
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||| |||||||||||  ||||||||||||||  ||||||||||||||    
T  48334722 actttaaccattttttttaactat-atataaatacaaatattagcatgtaagatg 48334669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 3017857 - 3017902
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaag 57  Q
    |||||||||||||||||  ||||||||||||||| |||||| ||||    
T  3017857 accatattttttaactattatataaatacaaatgttagcatataag 3017902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 15568129 - 15568084
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    |||||||||||||||| ||||||||||||||| || | ||||||||    
T  15568129 catattttttaactaatatataaatacaaatgttaccgtgtaagat 15568084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 49404805 - 49404846
Alignment:
Q  8 tttaaccatattttttaactaacatataaatacaaatgatag 49  Q
    ||||| |||||||||||||||| ||||||||| |||||||||    
T  49404805 tttaaacatattttttaactaatatataaatataaatgatag 49404846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 21797622 - 21797670
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  21797622 accatactttttaactaatgtataaatacaaatattagcatgtaagatg 21797670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 23940554 - 23940510
Alignment:
Q  16 tattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||| ||||||||| ||||| || |||||||||||    
T  23940554 tattttttaactaatatataaataaaaatgttaacatgtaagatg 23940510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 25527470 - 25527518
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||| | ||||||||||||||  || |||||||||||    
T  25527470 accatattttttaactgatatataaatacaaatattaacatgtaagatg 25527518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 27813481 - 27813445
Alignment:
Q  15 atattttttaactaacatataaatacaaatgatagca 51  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  27813481 atattttttaactaatatataaatacaaatgttagca 27813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 4008 - 4061
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  4008 actttgaccatattttttaactaatatataaatacaaatgttagcatgtaagat 4061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 7614681 - 7614729
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  7614681 accatattttttaactaatatataaatacaaatgttagcatgtaagatg 7614729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 2760929 - 2760875
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  2760929 actttgaccatattttttaactaatatataaatacaaatattagcatgtaagatg 2760875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 59
Target Start/End: Complemental strand, 2571075 - 2571031
Alignment:
Q  15 atattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||    
T  2571075 atattttttaactaatatataaatacaaatgttagcatgtaagat 2571031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 26125768 - 26125822
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  26125768 actttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatg 26125822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 29830403 - 29830457
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  29830403 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 29830457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 35381096 - 35381042
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  35381096 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 35381042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 38416852 - 38416798
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  38416852 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 38416798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 38721405 - 38721451
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||||| || ||||||||||||||| ||||||||||||||    
T  38721405 catattttttaacaaatatataaatacaaatgttagcatgtaagatg 38721451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 43967783 - 43967837
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  43967783 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 43967837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 44232279 - 44232225
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  44232279 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 44232225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 47386488 - 47386434
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  47386488 actttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatg 47386434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 54330892 - 54330838
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  54330892 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 54330838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 55209776 - 55209722
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  55209776 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 55209722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 10550484 - 10550540
Alignment:
Q  6 actttaaccatatttt--ttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||||||||  |||||||| ||||||||| ||||| ||||||||||||||    
T  10550484 actttaaccatattttttttaactaatatataaataaaaatgttagcatgtaagatg 10550540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 19903852 - 19903799
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    ||||| ||||||| |||||||||| ||||||||||||||| |||||||| ||||    
T  19903852 actttgaccatatattttaactaatatataaatacaaatgttagcatgtgagat 19903799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 29051744 - 29051793
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaag 57  Q
    ||||| |||||||||||||||||| ||||||||||||||  |||||||||||    
T  29051744 actttgaccatattttttaactaatatataaatacaaat--tagcatgtaag 29051793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 34652243 - 34652211
Alignment:
Q  12 accatattttttaactaacatataaatacaaat 44  Q
    |||||||||||||||||||||||||||||||||    
T  34652243 accatattttttaactaacatataaatacaaat 34652211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 25633256 - 25633295
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatg 45  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  25633256 actttaaccatattttttaattaatatataaatacaaatg 25633295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 3037040 - 3037090
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaa 56  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||    
T  3037040 actttgaccatactttttaactaatatataaatacaaatattagcatgtaa 3037090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 12240380 - 12240326
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  12240380 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 12240326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 12625311 - 12625365
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  12625311 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 12625365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 14144659 - 14144605
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||| ||||||||||||| ||||||||||||||  ||| ||||||||||    
T  14144659 actttgaccacattttttaactaatatataaatacaaatattagtatgtaagatg 14144605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 17610340 - 17610394
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||| ||||  |||||||||||||  ||||||||||||||    
T  17610340 actttgaccatattttttagctaatgtataaatacaaatattagcatgtaagatg 17610394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 25296782 - 25296728
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  25296782 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 25296728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 26170046 - 26170100
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  26170046 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 26170100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 36523170 - 36523116
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| || ||| ||||||||||| ||||||||||||||| || |||||||||||    
T  36523170 actttgactatactttttaactaatatataaatacaaatgttaacatgtaagatg 36523116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 38716946 - 38717000
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  38716946 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 38717000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 45291900 - 45291946
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  45291900 catactttttaactaatatataaatacaaatattagcatgtaagatg 45291946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 55091381 - 55091335
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||| ||| ||||||||||||||| ||| ||||||||||    
T  55091381 catattttttaattaatatataaatacaaatgttagtatgtaagatg 55091335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 50181120 - 50181173
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    ||||||| |||||||||||| |||  |||||||||||||  |||||||||||||    
T  50181120 actttaatcatattttttaattaatgtataaatacaaatattagcatgtaagat 50181173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 56297898 - 56297858
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcat 52  Q
    ||||||||| |||||||| ||||||||||||||| ||||||    
T  56297898 accatatttattaactaatatataaatacaaatgttagcat 56297858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 43444741 - 43444689
Alignment:
Q  7 ctttaaccatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    |||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  43444741 ctttgaccatattttttaactaatatataaatacaaatgttagcatgtaagat 43444689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 6223126 - 6223180
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  6223126 actttgaccatattttttaactaatatataaatacaaatattagcatgtaagatg 6223180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 11931751 - 11931805
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  11931751 actttgaccatattttttaactaatatataaatacaaatgttagcatttaagatg 11931805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 19262740 - 19262793
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    ||||| |||||||||||||||||| ||||||||||||||  |||||||||||||    
T  19262740 actttgaccatattttttaactaatatataaatacaaatattagcatgtaagat 19262793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 24252026 - 24252070
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaa 56  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||    
T  24252026 accatattttttaactaatatataaatacaaatgttagcatgtaa 24252070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 38839139 - 38839187
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  38839139 accatattttttaactaatatataaatacaaatgttagcatataagatg 38839187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 16865114 - 16865165
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaag 57  Q
    ||||| || ||| ||||||||||||||||||||||||||| |||||||||||    
T  16865114 actttgacgatactttttaactaacatataaatacaaatgttagcatgtaag 16865165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 5405056 - 5405110
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  5405056 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 5405110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 7608109 - 7608163
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  7608109 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 7608163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 7799907 - 7799961
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||| || ||||||||||| ||||||||||||||| ||||||||||||||    
T  7799907 actttgaccctactttttaactaatatataaatacaaatgttagcatgtaagatg 7799961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 8042224 - 8042170
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  8042224 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 8042170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 9172348 - 9172294
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||||||||  |||||||||||| | ||||||||||||||    
T  9172348 actttgaccatattttttaactaatgtataaatacaaaagttagcatgtaagatg 9172294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 19141268 - 19141214
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  19141268 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 19141214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 38292012 - 38292066
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||||||||||||||  ||||||||||||||| || |||||||||||    
T  38292012 actttgaccatattttttaactagtatataaatacaaatgttaacatgtaagatg 38292066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 42133820 - 42133866
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  42133820 catattttttaactaatatataaatacaaatgttagcatgaaagatg 42133866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 9006986 - 9006939
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatg 53  Q
    ||||| ||||||||||||||||||  |||||||||||||| |||||||    
T  9006986 actttgaccatattttttaactaatttataaatacaaatgttagcatg 9006939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 24093738 - 24093684
Alignment:
Q  6 actttaaccata-ttttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  24093738 actttgaccatacttttttaactaacatataa-tacaaatgttagcatgtaagatg 24093684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 11841795 - 11841741
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  11841795 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 11841741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 31610849 - 31610803
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaaga 58  Q
    ||||| |||||||||||| ||||||||||||||| ||| ||||||||    
T  31610849 accattttttttaactaatatataaatacaaatgttagaatgtaaga 31610803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 39358206 - 39358260
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  39358206 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 39358260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 44365217 - 44365271
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  44365217 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 44365271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 13125347 - 13125294
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    ||||| ||||||||||||||||||  |||||||||||||  |||||| ||||||    
T  13125347 actttcaccatattttttaactaatgtataaatacaaatattagcatctaagat 13125294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 9035 - 8981
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  9035 actttgaccacattttttaactaatatataaatacaaatgttagcatgtaagatg 8981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 138232 - 138178
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  138232 actttgaccacattttttaactaatatataaatacaaatgttagcatgtaagatg 138178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 38957230 - 38957284
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  38957230 actttgaccatattttttaactaacgtataaatacaaatattagcatgtaagatg 38957284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 616843 - 616897
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  616843 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 616897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 623236 - 623290
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  623236 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 623290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 9632223 - 9632269
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||| |||||||||||||||| |||| ||||||||||||||    
T  9632223 catattttttcactaacatataaatactaatgttagcatgtaagatg 9632269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 14237340 - 14237394
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  14237340 actttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatg 14237394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 18044485 - 18044539
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  18044485 actttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatg 18044539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 32998510 - 32998564
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  32998510 actttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatg 32998564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 33700275 - 33700221
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||||||||||||||| ||||||||||||||| ||| | ||||||||    
T  33700275 actttgaccatattttttaactaatatataaatacaaatgttagtaagtaagatg 33700221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 40494444 - 40494498
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  40494444 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 40494498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 41263870 - 41263924
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  41263870 actttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatg 41263924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 5878376 - 5878429
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    ||||| ||||||||||||||||||  |||||||||||||  |||||||||||||    
T  5878376 actttgaccatattttttaactaatgtataaatacaaatattagcatgtaagat 5878429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 18035166 - 18035214
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||| ||||||||||| |||||||| |||||| ||||||||||||||    
T  18035166 accataatttttaactaatatataaatgcaaatgttagcatgtaagatg 18035214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 40716715 - 40716671
Alignment:
Q  16 tattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||    
T  40716715 tattttttaactaatatataaatacaaattttagcatgtaagatg 40716671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 132085 - 132131
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||||||||  |||||||||||||  ||||||||||||||    
T  132085 catattttttaactaatgtataaatacaaatattagcatgtaagatg 132131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 3100697 - 3100643
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  3100697 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 3100643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 18090396 - 18090442
Alignment:
Q  14 catattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||| ||||||||| ||||| |||||| |||||||    
T  18090396 catattttttaactaatatataaatataaatgttagcatataagatg 18090442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 42587450 - 42587396
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  42587450 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 42587396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 3370458 - 3370405
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    ||||| |||||||||||||| ||| ||||||||||||||| ||  |||||||||    
T  3370458 actttgaccatattttttaattaatatataaatacaaatgttaatatgtaagat 3370405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 31869768 - 31869822
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||| |||||||||||| ||||||||||||||| ||||||||||||||    
T  31869768 actttgaccattttttttaactaatatataaatacaaatgttagcatgtaagatg 31869822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 8101666 - 8101714
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||||    
T  8101666 accatattttttaactaatatataaatacaaatgttaacatgtaagatg 8101714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 3623911 - 3623858
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  3623911 actttgaccatattttt-aactaatatataaatacaaatgttagcatgtaagatg 3623858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 4440910 - 4440964
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||  ||||||||||||||||||| ||||||||||||||    
T  4440910 actttgaccatactttttaggtaacatataaatacaaatgttagcatgtaagatg 4440964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 6563286 - 6563340
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  6563286 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 6563340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 15337548 - 15337598
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaa 56  Q
    ||||| |||||||||||||||||| ||||||||||||||  ||||||||||    
T  15337548 actttgaccatattttttaactaatatataaatacaaatattagcatgtaa 15337598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 15383132 - 15383078
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||||||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  15383132 actttaaccatactttttaactaatctataaatacaaatattagcatgtaagatg 15383078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 23158111 - 23158057
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||| ||||||||||||| ||||||||||||||| || |||||||||||    
T  23158111 actttgaccacattttttaactaatatataaatacaaatgttaacatgtaagatg 23158057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 24624143 - 24624089
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  24624143 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 24624089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 32414881 - 32414827
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  32414881 actttgaccatactttttaactaatatataaatacaaatattagcatgtaagatg 32414827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 1260490 - 1260543
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    ||||| |||||||||||||||||| |||||||||||| || ||||| |||||||    
T  1260490 actttgaccatattttttaactaatatataaatacaattgttagcacgtaagat 1260543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 5495321 - 5495362
Alignment:
Q  18 ttttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  5495321 ttttttaactaatatataaatacaaatgttagcatgtaagat 5495362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 17155226 - 17155263
Alignment:
Q  23 taactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  17155226 taactaacatataaatacaaatgttagcatgtaagatg 17155263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 18668889 - 18668836
Alignment:
Q  7 ctttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||| ||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  18668889 ctttgaccatattttttaactaatgtataaatacaaatattagcatgtaagatg 18668836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 10298769 - 10298725
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaa 56  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||    
T  10298769 accatattttttcactaatatataaatacaaatgttagcatgtaa 10298725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 4147991 - 4148045
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  4147991 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 4148045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 19088160 - 19088106
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||| | ||||||||||| ||||||||||||||  ||||||||||||||    
T  19088160 actttgaccaaactttttaactaatatataaatacaaatattagcatgtaagatg 19088106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 22054832 - 22054886
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  22054832 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaagatg 22054886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 28477814 - 28477864
Alignment:
Q  7 ctttaaccatattttttaactaacatataaatacaaatgatagcatgtaag 57  Q
    |||| |||||| ||||||||||| ||||||||||||||  |||||||||||    
T  28477814 ctttgaccataatttttaactaatatataaatacaaatattagcatgtaag 28477864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 29693944 - 29693994
Alignment:
Q  7 ctttaaccatattttttaactaacatataaatacaaatgatagcatgtaag 57  Q
    |||| |||||| ||||||||||| ||||||||||||||  |||||||||||    
T  29693944 ctttgaccataatttttaactaatatataaatacaaatactagcatgtaag 29693994  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 29790272 - 29790317
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaag 57  Q
    |||||| ||||||||||| ||||||||||||||  |||||||||||    
T  29790272 accataatttttaactaatatataaatacaaatattagcatgtaag 29790317  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 19240788 - 19240756
Alignment:
Q  12 accatattttttaactaacatataaatacaaat 44  Q
    |||||||||||||||||| ||||||||||||||    
T  19240788 accatattttttaactaatatataaatacaaat 19240756  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 20226500 - 20226448
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaaga 58  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||    
T  20226500 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaaga 20226448  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 22120484 - 22120432
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaaga 58  Q
    ||||| |||||| |||||||||||  |||||||||||||  ||||||||||||    
T  22120484 actttgaccatactttttaactaatgtataaatacaaatattagcatgtaaga 22120432  T

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Target: scaffold0262 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 22846 - 22894
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||| ||||||||||| | ||||||||||||||| ||||||||||||||    
T  22846 accacattttttaactcatatataaatacaaatgttagcatgtaagatg 22894  T

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Target: scaffold0099 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 28854 - 28800
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    ||||| ||||||||||||||||||  |||||||||||||  |||||| |||||||    
T  28854 actttgaccatattttttaactaatttataaatacaaatattagcatataagatg 28800  T

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Target: scaffold0608 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 1580 - 1633
Alignment:
Q  6 actttaaccatattttttaactaacatataaatacaaatgatagcatgtaagat 59  Q
    ||||||| |||||||||||| |||  |||||||||||||  |||||||||||||    
T  1580 actttaatcatattttttaattaatgtataaatacaaatattagcatgtaagat 1633  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 162033 - 161985
Alignment:
Q  12 accatattttttaactaacatataaatacaaatgatagcatgtaagatg 60  Q
    |||||| |||||||||||  |||||||||||||  ||||||||||||||    
T  162033 accatactttttaactaatgtataaatacaaatattagcatgtaagatg 161985  T

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